Search of human proteins with 4758582

Search of human proteins with 4758582

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4758582 isocitrate dehydrogenase 3 (NAD+) gamma isoform a
precursor [Homo sapiens]
         (393 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4758582 isocitrate dehydrogenase 3 (NAD+) gamma isoform a pre...   780   0.0  
gi|28178838 isocitrate dehydrogenase 3 (NAD+) gamma isoform b pr...   718   0.0  
gi|28178821 isocitrate dehydrogenase 3, beta subunit isoform a p...   356   2e-98
gi|28178816 isocitrate dehydrogenase 3, beta subunit isoform b p...   347   8e-96
gi|5031777 isocitrate dehydrogenase 3 (NAD+) alpha precursor [Ho...   276   3e-74
gi|28178819 isocitrate dehydrogenase 3, beta subunit isoform c [...   228   6e-60
gi|41872583 Rho-associated, coiled-coil containing protein kinas...    30   2.9  
gi|6912338 dynein, axonemal, intermediate chain 1 [Homo sapiens]       29   6.4  
gi|90265805 phospholipase C, delta 1 isoform 2 [Homo sapiens]          29   8.4  
gi|195972883 phospholipase C, delta 1 isoform 1 [Homo sapiens]         29   8.4  
gi|169194717 PREDICTED: similar to Na+/H+ exchanger domain conta...    29   8.4  
gi|154937338 Na+/H+ exchanger domain containing 1 isoform 2 [Hom...    29   8.4  
gi|66793392 Na+/H+ exchanger domain containing 1 isoform 1 [Homo...    29   8.4  

>gi|4758582 isocitrate dehydrogenase 3 (NAD+) gamma isoform a
           precursor [Homo sapiens]
          Length = 393

 Score =  780 bits (2015), Expect = 0.0
 Identities = 393/393 (100%), Positives = 393/393 (100%)

Query: 1   MALKVATVAGSAAKAVLGPALLCRPWEVLGAHEVPSRNIFSEQTIPPSAKYGGRHTVTMI 60
           MALKVATVAGSAAKAVLGPALLCRPWEVLGAHEVPSRNIFSEQTIPPSAKYGGRHTVTMI
Sbjct: 1   MALKVATVAGSAAKAVLGPALLCRPWEVLGAHEVPSRNIFSEQTIPPSAKYGGRHTVTMI 60

Query: 61  PGDGIGPELMLHVKSVFRHACVPVDFEEVHVSSNADEEDIRNAIMAIRRNRVALKGNIET 120
           PGDGIGPELMLHVKSVFRHACVPVDFEEVHVSSNADEEDIRNAIMAIRRNRVALKGNIET
Sbjct: 61  PGDGIGPELMLHVKSVFRHACVPVDFEEVHVSSNADEEDIRNAIMAIRRNRVALKGNIET 120

Query: 121 NHNLPPSHKSRNNILRTSLDLYANVIHCKSLPGVVTRHKDIDILIVRENTEGEYSSLEHE 180
           NHNLPPSHKSRNNILRTSLDLYANVIHCKSLPGVVTRHKDIDILIVRENTEGEYSSLEHE
Sbjct: 121 NHNLPPSHKSRNNILRTSLDLYANVIHCKSLPGVVTRHKDIDILIVRENTEGEYSSLEHE 180

Query: 181 SVAGVVESLKIITKAKSLRIAEYAFKLAQESGRKKVTAVHKANIMKLGDGLFLQCCREVA 240
           SVAGVVESLKIITKAKSLRIAEYAFKLAQESGRKKVTAVHKANIMKLGDGLFLQCCREVA
Sbjct: 181 SVAGVVESLKIITKAKSLRIAEYAFKLAQESGRKKVTAVHKANIMKLGDGLFLQCCREVA 240

Query: 241 ARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVGGPGLVAGANYG 300
           ARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVGGPGLVAGANYG
Sbjct: 241 ARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVGGPGLVAGANYG 300

Query: 301 HVYAVFETATRNTGKSIANKNIANPTATLLASCMMLDHLKLHSYATSIRKAVLASMDNEN 360
           HVYAVFETATRNTGKSIANKNIANPTATLLASCMMLDHLKLHSYATSIRKAVLASMDNEN
Sbjct: 301 HVYAVFETATRNTGKSIANKNIANPTATLLASCMMLDHLKLHSYATSIRKAVLASMDNEN 360

Query: 361 MHTPDIGGQGTTSEAIQDVIRHIRVINGRAVEA 393
           MHTPDIGGQGTTSEAIQDVIRHIRVINGRAVEA
Sbjct: 361 MHTPDIGGQGTTSEAIQDVIRHIRVINGRAVEA 393


>gi|28178838 isocitrate dehydrogenase 3 (NAD+) gamma isoform b
           precursor [Homo sapiens]
          Length = 380

 Score =  718 bits (1853), Expect = 0.0
 Identities = 361/364 (99%), Positives = 362/364 (99%)

Query: 1   MALKVATVAGSAAKAVLGPALLCRPWEVLGAHEVPSRNIFSEQTIPPSAKYGGRHTVTMI 60
           MALKVATVAGSAAKAVLGPALLCRPWEVLGAHEVPSRNIFSEQTIPPSAKYGGRHTVTMI
Sbjct: 1   MALKVATVAGSAAKAVLGPALLCRPWEVLGAHEVPSRNIFSEQTIPPSAKYGGRHTVTMI 60

Query: 61  PGDGIGPELMLHVKSVFRHACVPVDFEEVHVSSNADEEDIRNAIMAIRRNRVALKGNIET 120
           PGDGIGPELMLHVKSVFRHACVPVDFEEVHVSSNADEEDIRNAIMAIRRNRVALKGNIET
Sbjct: 61  PGDGIGPELMLHVKSVFRHACVPVDFEEVHVSSNADEEDIRNAIMAIRRNRVALKGNIET 120

Query: 121 NHNLPPSHKSRNNILRTSLDLYANVIHCKSLPGVVTRHKDIDILIVRENTEGEYSSLEHE 180
           NHNLPPSHKSRNNILRTSLDLYANVIHCKSLPGVVTRHKDIDILIVRENTEGEYSSLEHE
Sbjct: 121 NHNLPPSHKSRNNILRTSLDLYANVIHCKSLPGVVTRHKDIDILIVRENTEGEYSSLEHE 180

Query: 181 SVAGVVESLKIITKAKSLRIAEYAFKLAQESGRKKVTAVHKANIMKLGDGLFLQCCREVA 240
           SVAGVVESLKIITKAKSLRIAEYAFKLAQESGRKKVTAVHKANIMKLGDGLFLQCCREVA
Sbjct: 181 SVAGVVESLKIITKAKSLRIAEYAFKLAQESGRKKVTAVHKANIMKLGDGLFLQCCREVA 240

Query: 241 ARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVGGPGLVAGANYG 300
           ARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVGGPGLVAGANYG
Sbjct: 241 ARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVGGPGLVAGANYG 300

Query: 301 HVYAVFETATRNTGKSIANKNIANPTATLLASCMMLDHLKLHSYATSIRKAVLASMDNEN 360
           HVYAVFETATRNTGKSIANKNIANPTATLLASCMMLDHLKLHSYATSIRKAVLASMDNEN
Sbjct: 301 HVYAVFETATRNTGKSIANKNIANPTATLLASCMMLDHLKLHSYATSIRKAVLASMDNEN 360

Query: 361 MHTP 364
           +  P
Sbjct: 361 VRFP 364


>gi|28178821 isocitrate dehydrogenase 3, beta subunit isoform a
           precursor [Homo sapiens]
          Length = 385

 Score =  356 bits (913), Expect = 2e-98
 Identities = 183/335 (54%), Positives = 235/335 (70%), Gaps = 3/335 (0%)

Query: 53  GRHTVTMIPGDGIGPELMLHVKSVFRHACVPVDFEEVHVS---SNADEEDIRNAIMAIRR 109
           G   VTM+PGDG+GPELM  VK VF+ A VPV+F+E H+S   + A EE +   + +++ 
Sbjct: 47  GSFPVTMLPGDGVGPELMHAVKEVFKAAAVPVEFQEHHLSEVQNMASEEKLEQVLSSMKE 106

Query: 110 NRVALKGNIETNHNLPPSHKSRNNILRTSLDLYANVIHCKSLPGVVTRHKDIDILIVREN 169
           N+VA+ G I T         S +  LR  LDL+ANV+H KSLPG +TRH ++D++I+RE 
Sbjct: 107 NKVAIIGKIHTPMEYKGELASYDMRLRRKLDLFANVVHVKSLPGYMTRHNNLDLVIIREQ 166

Query: 170 TEGEYSSLEHESVAGVVESLKIITKAKSLRIAEYAFKLAQESGRKKVTAVHKANIMKLGD 229
           TEGEYSSLEHES  GV+E LKI+T+AKS RIA++AF  A + GR KVTAVHKANIMKLGD
Sbjct: 167 TEGEYSSLEHESARGVIECLKIVTRAKSQRIAKFAFDYATKKGRGKVTAVHKANIMKLGD 226

Query: 230 GLFLQCCREVAARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVG 289
           GLFLQCC EVA  YP+I FE MI+DN  MQLV  P QFDV+VMPNLYGNI++N+ AGLVG
Sbjct: 227 GLFLQCCEEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLVG 286

Query: 290 GPGLVAGANYGHVYAVFETATRNTGKSIANKNIANPTATLLASCMMLDHLKLHSYATSIR 349
           G G+V G +Y   YAVFET  R+       +NIANPTA LL++  ML HL L  +++ I 
Sbjct: 287 GAGVVPGESYSAEYAVFETGARHPFAQAVGRNIANPTAMLLSASNMLRHLNLEYHSSMIA 346

Query: 350 KAVLASMDNENMHTPDIGGQGTTSEAIQDVIRHIR 384
            AV   +    + T D+GG  TT++ I+ VI H++
Sbjct: 347 DAVKKVIKVGKVRTRDMGGYSTTTDFIKSVIGHLQ 381


>gi|28178816 isocitrate dehydrogenase 3, beta subunit isoform b
           precursor [Homo sapiens]
          Length = 383

 Score =  347 bits (891), Expect = 8e-96
 Identities = 180/331 (54%), Positives = 229/331 (69%), Gaps = 3/331 (0%)

Query: 53  GRHTVTMIPGDGIGPELMLHVKSVFRHACVPVDFEEVHVS---SNADEEDIRNAIMAIRR 109
           G   VTM+PGDG+GPELM  VK VF+ A VPV+F+E H+S   + A EE +   + +++ 
Sbjct: 47  GSFPVTMLPGDGVGPELMHAVKEVFKAAAVPVEFQEHHLSEVQNMASEEKLEQVLSSMKE 106

Query: 110 NRVALKGNIETNHNLPPSHKSRNNILRTSLDLYANVIHCKSLPGVVTRHKDIDILIVREN 169
           N+VA+ G I T         S +  LR  LDL+ANV+H KSLPG +TRH ++D++I+RE 
Sbjct: 107 NKVAIIGKIHTPMEYKGELASYDMRLRRKLDLFANVVHVKSLPGYMTRHNNLDLVIIREQ 166

Query: 170 TEGEYSSLEHESVAGVVESLKIITKAKSLRIAEYAFKLAQESGRKKVTAVHKANIMKLGD 229
           TEGEYSSLEHES  GV+E LKI+T+AKS RIA++AF  A + GR KVTAVHKANIMKLGD
Sbjct: 167 TEGEYSSLEHESARGVIECLKIVTRAKSQRIAKFAFDYATKKGRGKVTAVHKANIMKLGD 226

Query: 230 GLFLQCCREVAARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVG 289
           GLFLQCC EVA  YP+I FE MI+DN  MQLV  P QFDV+VMPNLYGNI++N+ AGLVG
Sbjct: 227 GLFLQCCEEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLVG 286

Query: 290 GPGLVAGANYGHVYAVFETATRNTGKSIANKNIANPTATLLASCMMLDHLKLHSYATSIR 349
           G G+V G +Y   YAVFET  R+       +NIANPTA LL++  ML HL L  +++ I 
Sbjct: 287 GAGVVPGESYSAEYAVFETGARHPFAQAVGRNIANPTAMLLSASNMLRHLNLEYHSSMIA 346

Query: 350 KAVLASMDNENMHTPDIGGQGTTSEAIQDVI 380
            AV   +    + T D+GG  T  +  + VI
Sbjct: 347 DAVKKVIKVGKVRTSDMGGYATCHDFTEAVI 377


>gi|5031777 isocitrate dehydrogenase 3 (NAD+) alpha precursor [Homo
           sapiens]
          Length = 366

 Score =  276 bits (705), Expect = 3e-74
 Identities = 156/372 (41%), Positives = 225/372 (60%), Gaps = 16/372 (4%)

Query: 18  GPALLCRPWEVLGAHEVPSRNIFSEQTIPPSAKYGGRHTVTMIPGDGIGPELMLHVKSVF 77
           GPA + +   +LGA   P +              GG  TVT+IPGDGIGPE+   V  +F
Sbjct: 3   GPAWISKVSRLLGAFHNPKQ--------VTRGFTGGVQTVTLIPGDGIGPEISAAVMKIF 54

Query: 78  RHACVPVDFEEVHVSSNADEEDI----RNAIMAIRRNRVALKGNIETNHNLPPSHKSRNN 133
             A  P+ +EE +V++             A  ++ +N++ LKG ++T   +   H S N 
Sbjct: 55  DAAKAPIQWEERNVTAIQGPGGKWMIPSEAKESMDKNKMGLKGPLKTP--IAAGHPSMNL 112

Query: 134 ILRTSLDLYANVIHCKSLPGVVTRHKDIDILIVRENTEGEYSSLEHESVAGVVESLKIIT 193
           +LR + DLYANV  C S+ G  T + D++I+ +RENTEGEYS +EH  V GVV+S+K+IT
Sbjct: 113 LLRKTFDLYANVRPCVSIEGYKTPYTDVNIVTIRENTEGEYSGIEHVIVDGVVQSIKLIT 172

Query: 194 KAKSLRIAEYAFKLAQESGRKKVTAVHKANIMKLGDGLFLQCCREVAARYPQITFENMIV 253
           +  S RIAE+AF+ A+ + R  VTAVHKANIM++ DGLFLQ CREVA     I F  M +
Sbjct: 173 EGASKRIAEFAFEYARNNHRSNVTAVHKANIMRMSDGLFLQKCREVAESCKDIKFNEMYL 232

Query: 254 DNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVGGPGLVAGANYG-HVYAVFETATRN 312
           D   + +V  P QFDV+VMPNLYG+I++++CAGL+GG G+    N G +  A+FE +   
Sbjct: 233 DTVCLNMVQDPSQFDVLVMPNLYGDILSDLCAGLIGGLGVTPSGNIGANGVAIFE-SVHG 291

Query: 313 TGKSIANKNIANPTATLLASCMMLDHLKLHSYATSIRKAVLASMDNENMHTPDIGGQGTT 372
           T   IA K++ANPTA LL++ MML H+ L  +A  I  A  A++ +    T D+GG    
Sbjct: 292 TAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAARIEAACFATIKDGKSLTKDLGGNAKC 351

Query: 373 SEAIQDVIRHIR 384
           S+  +++ R ++
Sbjct: 352 SDFTEEICRRVK 363


>gi|28178819 isocitrate dehydrogenase 3, beta subunit isoform c
           [Homo sapiens]
          Length = 233

 Score =  228 bits (582), Expect = 6e-60
 Identities = 116/205 (56%), Positives = 146/205 (71%)

Query: 180 ESVAGVVESLKIITKAKSLRIAEYAFKLAQESGRKKVTAVHKANIMKLGDGLFLQCCREV 239
           +S  GV+E LKI+T+AKS RIA++AF  A + GR KVTAVHKANIMKLGDGLFLQCC EV
Sbjct: 25  QSARGVIECLKIVTRAKSQRIAKFAFDYATKKGRGKVTAVHKANIMKLGDGLFLQCCEEV 84

Query: 240 AARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVGGPGLVAGANY 299
           A  YP+I FE MI+DN  MQLV  P QFDV+VMPNLYGNI++N+ AGLVGG G+V G +Y
Sbjct: 85  AELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLVGGAGVVPGESY 144

Query: 300 GHVYAVFETATRNTGKSIANKNIANPTATLLASCMMLDHLKLHSYATSIRKAVLASMDNE 359
              YAVFET  R+       +NIANPTA LL++  ML HL L  +++ I  AV   +   
Sbjct: 145 SAEYAVFETGARHPFAQAVGRNIANPTAMLLSASNMLRHLNLEYHSSMIADAVKKVIKVG 204

Query: 360 NMHTPDIGGQGTTSEAIQDVIRHIR 384
            + T D+GG  TT++ I+ VI H++
Sbjct: 205 KVRTRDMGGYSTTTDFIKSVIGHLQ 229


>gi|41872583 Rho-associated, coiled-coil containing protein kinase 2
           [Homo sapiens]
          Length = 1388

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 31/161 (19%), Positives = 70/161 (43%), Gaps = 30/161 (18%)

Query: 46  PPSAKYGGRHTVTMIPGDGIGPELMLHVKSVFRHACVPVDFEEVHVSSNADEEDIRNAIM 105
           PP+ K  G       PGDG G      ++++ R    P++ E +    N+   D+     
Sbjct: 5   PPTGKMPGAPETA--PGDGAGASRQRKLEALIRDPRSPINVESLLDGLNSLVLDL----- 57

Query: 106 AIRRNRVALKGNIETNHNLPPSHKSRNNILRTSLDLYANVIHCKSLPGVVTRHKDIDIL- 164
                            + P   K++N  +   L+ Y  ++  K + G+  + +D D++ 
Sbjct: 58  -----------------DFPALRKNKN--IDNFLNRYEKIV--KKIRGLQMKAEDYDVVK 96

Query: 165 IVRENTEGEYSSLEHESVAGVVESLKIITKAKSLRIAEYAF 205
           ++     GE   + H++ +  V ++K+++K + ++ ++ AF
Sbjct: 97  VIGRGAFGEVQLVRHKA-SQKVYAMKLLSKFEMIKRSDSAF 136


>gi|6912338 dynein, axonemal, intermediate chain 1 [Homo sapiens]
          Length = 699

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 17/59 (28%), Positives = 29/59 (49%)

Query: 154 VVTRHKDIDILIVRENTEGEYSSLEHESVAGVVESLKIITKAKSLRIAEYAFKLAQESG 212
           +   +  +  LI +++ EG       E VAG  ES+K+I++  +L   E   +L  E G
Sbjct: 100 LAVHYTQVGNLIPKDSDEGRRQHYRDELVAGSQESVKVISETGNLEEDEEPKELETEPG 158


>gi|90265805 phospholipase C, delta 1 isoform 2 [Homo sapiens]
          Length = 756

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 41/137 (29%)

Query: 15  AVLGPALLCRPWEVLGAHEVPSRNIFSEQTIPPSAKYGGRHTVTMIPGDGIGPELMLHVK 74
           A+LGP LL RP + +  + +PS      + +    K GG     + PG   GPE      
Sbjct: 407 AILGPMLLNRPLDGV-TNSLPSPEQLKGKILLKGKKLGG----LLPPGGEGGPE------ 455

Query: 75  SVFRHACVPVDFEEVHVSSNADEEDIRNAIMAIRRNRVALKGNIETNHNLPPSHKSRNNI 134
                A V  D +E   ++  ++E +R+ +                       HK + + 
Sbjct: 456 -----ATVVSDEDE---AAEMEDEAVRSRVQ----------------------HKPKEDK 485

Query: 135 LRTSLDLYANVIHCKSL 151
           LR + +L   VI+CKS+
Sbjct: 486 LRLAQELSDMVIYCKSV 502


>gi|195972883 phospholipase C, delta 1 isoform 1 [Homo sapiens]
          Length = 777

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 41/137 (29%)

Query: 15  AVLGPALLCRPWEVLGAHEVPSRNIFSEQTIPPSAKYGGRHTVTMIPGDGIGPELMLHVK 74
           A+LGP LL RP + +  + +PS      + +    K GG     + PG   GPE      
Sbjct: 428 AILGPMLLNRPLDGV-TNSLPSPEQLKGKILLKGKKLGG----LLPPGGEGGPE------ 476

Query: 75  SVFRHACVPVDFEEVHVSSNADEEDIRNAIMAIRRNRVALKGNIETNHNLPPSHKSRNNI 134
                A V  D +E   ++  ++E +R+ +                       HK + + 
Sbjct: 477 -----ATVVSDEDE---AAEMEDEAVRSRVQ----------------------HKPKEDK 506

Query: 135 LRTSLDLYANVIHCKSL 151
           LR + +L   VI+CKS+
Sbjct: 507 LRLAQELSDMVIYCKSV 523


>gi|169194717 PREDICTED: similar to Na+/H+ exchanger domain
           containing 1 [Homo sapiens]
          Length = 271

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 2/90 (2%)

Query: 26  WEVLGAHEVPSRNIFSEQTIPPSAKYGGRH-TVTMIPGDGIGPELMLHVKSVFRHACVPV 84
           W +LG+  +P  N+F    I  SA  GG++  +  IP     P L+  + + F    VP 
Sbjct: 3   WSILGSEALPGGNLFGLLIIFYSAIIGGKNLQLIRIPLVPPFPPLLGMLLAGFTIRNVPF 62

Query: 85  DFEEVHVSSNADEEDIRNAIMAIRRNRVAL 114
             E VHV  NA    +R+  + I   R  L
Sbjct: 63  INEHVHV-PNAWSSILRSIALNIILIRAGL 91


>gi|154937338 Na+/H+ exchanger domain containing 1 isoform 2 [Homo
           sapiens]
          Length = 475

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 23  CRPWEVLGAHEVPSRNIFSEQTIPPSAKYGGR-HTVTMIPGDGIGPELMLHVKSVFRHAC 81
           C  W +LG+  +P  N+F    I  SA  GG+   +  IP     P L+  + + F    
Sbjct: 79  CMTWSILGSEALPGGNLFGLFIIFYSAIIGGKILQLIRIPLVPPLPPLLGMLLAGFTIRN 138

Query: 82  VPVDFEEVHV 91
           VP   E VHV
Sbjct: 139 VPFINEHVHV 148


>gi|66793392 Na+/H+ exchanger domain containing 1 isoform 1 [Homo
           sapiens]
          Length = 515

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 23  CRPWEVLGAHEVPSRNIFSEQTIPPSAKYGGR-HTVTMIPGDGIGPELMLHVKSVFRHAC 81
           C  W +LG+  +P  N+F    I  SA  GG+   +  IP     P L+  + + F    
Sbjct: 79  CMTWSILGSEALPGGNLFGLFIIFYSAIIGGKILQLIRIPLVPPLPPLLGMLLAGFTIRN 138

Query: 82  VPVDFEEVHV 91
           VP   E VHV
Sbjct: 139 VPFINEHVHV 148


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.133    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,893,824
Number of Sequences: 37866
Number of extensions: 575081
Number of successful extensions: 1300
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1290
Number of HSP's gapped (non-prelim): 13
length of query: 393
length of database: 18,247,518
effective HSP length: 104
effective length of query: 289
effective length of database: 14,309,454
effective search space: 4135432206
effective search space used: 4135432206
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.