Search of human proteins with 4758184

Search of human proteins with 4758184

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4758184 tRNA aspartic acid methyltransferase 1 isoform a
[Homo sapiens]
         (391 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4758184 tRNA aspartic acid methyltransferase 1 isoform a [Hom...   776   0.0  
gi|28872770 tRNA aspartic acid methyltransferase 1 isoform b [Ho...   715   0.0  
gi|28872768 tRNA aspartic acid methyltransferase 1 isoform c [Ho...   665   0.0  
gi|195927037 DNA (cytosine-5-)-methyltransferase 1 isoform a [Ho...    54   3e-07
gi|4503351 DNA (cytosine-5-)-methyltransferase 1 isoform b [Homo...    54   3e-07
gi|24415404 MDN1, midasin homolog [Homo sapiens]                       38   0.018
gi|7706637 protein inhibitor of activated STAT, 1 [Homo sapiens]       33   0.44 
gi|28559065 DNA cytosine-5 methyltransferase 3 beta isoform 6 [H...    32   1.3  
gi|28559063 DNA cytosine-5 methyltransferase 3 beta isoform 3 [H...    32   1.3  
gi|28559061 DNA cytosine-5 methyltransferase 3 beta isoform 2 [H...    32   1.3  
gi|5901940 DNA cytosine-5 methyltransferase 3 beta isoform 1 [Ho...    32   1.3  
gi|19923559 EMSY protein [Homo sapiens]                                30   2.9  
gi|20357588 TBP-associated factor 1 isoform 2 [Homo sapiens]           30   4.9  
gi|20357585 TBP-associated factor 1 isoform 1 [Homo sapiens]           30   4.9  
gi|24429572 TBP-associated factor RNA polymerase 1-like [Homo sa...    30   4.9  
gi|50083293 coiled-coil domain containing 123 [Homo sapiens]           30   4.9  
gi|110349750 malonyl-CoA decarboxylase precursor [Homo sapiens]        29   8.3  

>gi|4758184 tRNA aspartic acid methyltransferase 1 isoform a [Homo
           sapiens]
          Length = 391

 Score =  776 bits (2005), Expect = 0.0
 Identities = 391/391 (100%), Positives = 391/391 (100%)

Query: 1   MEPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGI 60
           MEPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGI
Sbjct: 1   MEPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGI 60

Query: 61  TLEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLEN 120
           TLEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLEN
Sbjct: 61  TLEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLEN 120

Query: 121 VKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPG 180
           VKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPG
Sbjct: 121 VKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPG 180

Query: 181 QVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHR 240
           QVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHR
Sbjct: 181 QVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHR 240

Query: 241 KNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSY 300
           KNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSY
Sbjct: 241 KNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSY 300

Query: 301 IEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEFGF 360
           IEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEFGF
Sbjct: 301 IEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEFGF 360

Query: 361 PEKITVKQRYRLLGNSLNVHVVAKLIKILYE 391
           PEKITVKQRYRLLGNSLNVHVVAKLIKILYE
Sbjct: 361 PEKITVKQRYRLLGNSLNVHVVAKLIKILYE 391


>gi|28872770 tRNA aspartic acid methyltransferase 1 isoform b [Homo
           sapiens]
          Length = 367

 Score =  715 bits (1846), Expect = 0.0
 Identities = 367/391 (93%), Positives = 367/391 (93%), Gaps = 24/391 (6%)

Query: 1   MEPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGI 60
           MEPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGI
Sbjct: 1   MEPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGI 60

Query: 61  TLEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLEN 120
           TLEEFDRLSFDMILMSPPCQPFTR                        LQKLPKYILLEN
Sbjct: 61  TLEEFDRLSFDMILMSPPCQPFTR------------------------LQKLPKYILLEN 96

Query: 121 VKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPG 180
           VKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPG
Sbjct: 97  VKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPG 156

Query: 181 QVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHR 240
           QVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHR
Sbjct: 157 QVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHR 216

Query: 241 KNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSY 300
           KNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSY
Sbjct: 217 KNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSY 276

Query: 301 IEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEFGF 360
           IEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEFGF
Sbjct: 277 IEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEFGF 336

Query: 361 PEKITVKQRYRLLGNSLNVHVVAKLIKILYE 391
           PEKITVKQRYRLLGNSLNVHVVAKLIKILYE
Sbjct: 337 PEKITVKQRYRLLGNSLNVHVVAKLIKILYE 367


>gi|28872768 tRNA aspartic acid methyltransferase 1 isoform c [Homo
           sapiens]
          Length = 345

 Score =  665 bits (1716), Expect = 0.0
 Identities = 345/391 (88%), Positives = 345/391 (88%), Gaps = 46/391 (11%)

Query: 1   MEPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGI 60
           MEPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGI
Sbjct: 1   MEPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGI 60

Query: 61  TLEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLEN 120
           TLEEFDRLSFDMILMSPPCQPFT                                     
Sbjct: 61  TLEEFDRLSFDMILMSPPCQPFT------------------------------------- 83

Query: 121 VKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPG 180
                    RDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPG
Sbjct: 84  ---------RDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPG 134

Query: 181 QVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHR 240
           QVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHR
Sbjct: 135 QVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHR 194

Query: 241 KNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSY 300
           KNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSY
Sbjct: 195 KNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSY 254

Query: 301 IEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEFGF 360
           IEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEFGF
Sbjct: 255 IEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEFGF 314

Query: 361 PEKITVKQRYRLLGNSLNVHVVAKLIKILYE 391
           PEKITVKQRYRLLGNSLNVHVVAKLIKILYE
Sbjct: 315 PEKITVKQRYRLLGNSLNVHVVAKLIKILYE 345


>gi|195927037 DNA (cytosine-5-)-methyltransferase 1 isoform a [Homo
            sapiens]
          Length = 1632

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 19/189 (10%)

Query: 4    LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQ--------LLAK 55
            LR L+++SG GG+     ++ I +  + AI++   A + ++ N P +         LL  
Sbjct: 1155 LRTLDVFSGCGGLSEGFHQAGI-SDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKL 1213

Query: 56   TIEGITLEEFDRL-----SFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQ 110
             + G T     +        +M+   PPCQ F+ + R    T S+  + L +  +     
Sbjct: 1214 VMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDY 1273

Query: 111  KLPKYILLENVKGFEVSSTRDLLIQTIENC----GFQYQEFLLSPTSLGIPNSRLRYFLI 166
              P++ LLENV+ F VS  R ++++    C    G+Q    +L     G+  +R R  ++
Sbjct: 1274 YRPRFFLLENVRNF-VSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIIL 1332

Query: 167  AKLQSEPLP 175
            A    E LP
Sbjct: 1333 AAAPGEKLP 1341


>gi|4503351 DNA (cytosine-5-)-methyltransferase 1 isoform b [Homo
            sapiens]
          Length = 1616

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 19/189 (10%)

Query: 4    LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQ--------LLAK 55
            LR L+++SG GG+     ++ I +  + AI++   A + ++ N P +         LL  
Sbjct: 1139 LRTLDVFSGCGGLSEGFHQAGI-SDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKL 1197

Query: 56   TIEGITLEEFDRL-----SFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQ 110
             + G T     +        +M+   PPCQ F+ + R    T S+  + L +  +     
Sbjct: 1198 VMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDY 1257

Query: 111  KLPKYILLENVKGFEVSSTRDLLIQTIENC----GFQYQEFLLSPTSLGIPNSRLRYFLI 166
              P++ LLENV+ F VS  R ++++    C    G+Q    +L     G+  +R R  ++
Sbjct: 1258 YRPRFFLLENVRNF-VSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIIL 1316

Query: 167  AKLQSEPLP 175
            A    E LP
Sbjct: 1317 AAAPGEKLP 1325


>gi|24415404 MDN1, midasin homolog [Homo sapiens]
          Length = 5596

 Score = 37.7 bits (86), Expect = 0.018
 Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 6/150 (4%)

Query: 224  GKDAILFKLETAEEIHRKNQQDSDLS---VKMLKDFLEDDTDVNQYLLPPKSLLRYALLL 280
            G+ A+    E+ + +H  ++Q SD S   +  L  F +  T + Q+L    ++   A  L
Sbjct: 5421 GQIAVCSFGESVKLLHPFHEQFSDYSGSQILRLCKFQQKKTKIAQFLESVANMFAAAQQL 5480

Query: 281  --DIVQPTCRRSVCFTKGYGSYIEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLIL 338
              +I   T +  +  + G G ++EG   VL   +  +  NI+     L        +L +
Sbjct: 5481 SQNISSETAQLLLVVSDGRGLFLEGKERVLAAVQAARNANIFVIFVVLDNPSSRDSILDI 5540

Query: 339  KLRYFT-PKEIANLLGFPPEFGFPEKITVK 367
            K+  F  P E+  +  +  EF FP  I ++
Sbjct: 5541 KVPIFKGPGEMPEIRSYMEEFPFPYYIILR 5570


>gi|7706637 protein inhibitor of activated STAT, 1 [Homo sapiens]
          Length = 651

 Score = 33.1 bits (74), Expect = 0.44
 Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 24/118 (20%)

Query: 18  HALRESCIPAQVVAAIDVNTVANEVYKYNFP--------------HTQLLAKTIEGITLE 63
           H L+  C PA       V     E+Y+  FP              H+  +  T+   T+ 
Sbjct: 43  HLLKAGCSPA-------VQMKIKELYRRRFPQKIMTPADLSIPNVHSSPMPATLSPSTIP 95

Query: 64  EFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENV 121
           +   L++D    S P  P + +G + ++      S LH +    +LQKLP Y LL+ +
Sbjct: 96  Q---LTYDGHPASSPLLPVSLLGPKHELELPHLTSALHPVHPDIKLQKLPFYDLLDEL 150


>gi|28559065 DNA cytosine-5 methyltransferase 3 beta isoform 6 [Homo
           sapiens]
          Length = 845

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 31/137 (22%), Positives = 55/137 (40%), Gaps = 7/137 (5%)

Query: 3   PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITL 62
           P+RVL L+ G+   +  L+E  I      A +V   +  V              +  IT 
Sbjct: 566 PIRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAVGTVKHEGNIKYVNDVRNITK 625

Query: 63  EEFDRLS-FDMILMSPPCQPFTRI--GRQG--DMTDSRTNSFLHILDILPRLQ--KLPKY 115
           +  +    FD+++   PC   + +   R+G  + T      F H+L+     +    P +
Sbjct: 626 KNIEEWGPFDLVIGGSPCNDLSNVNPARKGLYEGTGRLFFEFYHLLNYSRPKEGDDRPFF 685

Query: 116 ILLENVKGFEVSSTRDL 132
            + ENV   +V   RD+
Sbjct: 686 WMFENVVAMKVGDKRDI 702


>gi|28559063 DNA cytosine-5 methyltransferase 3 beta isoform 3 [Homo
           sapiens]
          Length = 770

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 31/137 (22%), Positives = 55/137 (40%), Gaps = 7/137 (5%)

Query: 3   PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITL 62
           P+RVL L+ G+   +  L+E  I      A +V   +  V              +  IT 
Sbjct: 554 PIRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAVGTVKHEGNIKYVNDVRNITK 613

Query: 63  EEFDRLS-FDMILMSPPCQPFTRI--GRQG--DMTDSRTNSFLHILDILPRLQ--KLPKY 115
           +  +    FD+++   PC   + +   R+G  + T      F H+L+     +    P +
Sbjct: 614 KNIEEWGPFDLVIGGSPCNDLSNVNPARKGLYEGTGRLFFEFYHLLNYSRPKEGDDRPFF 673

Query: 116 ILLENVKGFEVSSTRDL 132
            + ENV   +V   RD+
Sbjct: 674 WMFENVVAMKVGDKRDI 690


>gi|28559061 DNA cytosine-5 methyltransferase 3 beta isoform 2 [Homo
           sapiens]
          Length = 833

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 31/137 (22%), Positives = 55/137 (40%), Gaps = 7/137 (5%)

Query: 3   PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITL 62
           P+RVL L+ G+   +  L+E  I      A +V   +  V              +  IT 
Sbjct: 554 PIRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAVGTVKHEGNIKYVNDVRNITK 613

Query: 63  EEFDRLS-FDMILMSPPCQPFTRI--GRQG--DMTDSRTNSFLHILDILPRLQ--KLPKY 115
           +  +    FD+++   PC   + +   R+G  + T      F H+L+     +    P +
Sbjct: 614 KNIEEWGPFDLVIGGSPCNDLSNVNPARKGLYEGTGRLFFEFYHLLNYSRPKEGDDRPFF 673

Query: 116 ILLENVKGFEVSSTRDL 132
            + ENV   +V   RD+
Sbjct: 674 WMFENVVAMKVGDKRDI 690


>gi|5901940 DNA cytosine-5 methyltransferase 3 beta isoform 1 [Homo
           sapiens]
          Length = 853

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 31/137 (22%), Positives = 55/137 (40%), Gaps = 7/137 (5%)

Query: 3   PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITL 62
           P+RVL L+ G+   +  L+E  I      A +V   +  V              +  IT 
Sbjct: 574 PIRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAVGTVKHEGNIKYVNDVRNITK 633

Query: 63  EEFDRLS-FDMILMSPPCQPFTRI--GRQG--DMTDSRTNSFLHILDILPRLQ--KLPKY 115
           +  +    FD+++   PC   + +   R+G  + T      F H+L+     +    P +
Sbjct: 634 KNIEEWGPFDLVIGGSPCNDLSNVNPARKGLYEGTGRLFFEFYHLLNYSRPKEGDDRPFF 693

Query: 116 ILLENVKGFEVSSTRDL 132
            + ENV   +V   RD+
Sbjct: 694 WMFENVVAMKVGDKRDI 710


>gi|19923559 EMSY protein [Homo sapiens]
          Length = 1322

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%)

Query: 148 LLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQVLMEFPKIESVHPQKYAMDVENKIQE 207
           ++S  + G+  S ++     +L S      AP Q+L +FPK     P++    V+ + Q+
Sbjct: 363 VMSTVAQGVSTSAIK-MASTRLPSPKSLVSAPTQILAQFPKQHQQSPKQQLYQVQQQTQQ 421

Query: 208 KNVEPN 213
           +  +P+
Sbjct: 422 QVAQPS 427


>gi|20357588 TBP-associated factor 1 isoform 2 [Homo sapiens]
          Length = 1872

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 24/118 (20%), Positives = 50/118 (42%), Gaps = 7/118 (5%)

Query: 26  PAQVVAAIDVNTVANEVYKYNFPHTQ-LLAKTIEGITLEEFDRLSFDMILMSPPCQPFTR 84
           P Q++ A + N     +Y +  P T  L+ +T +G  + E      D+ ++   C  F  
Sbjct: 736 PGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQGYYIREL----VDIFVVGQQCPLFEV 791

Query: 85  IGRQGDMTDSRTNSFLH--ILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENC 140
            G      ++    FL   I  +  + +  P+ I +E++K    S +   + + ++ C
Sbjct: 792 PGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSIRKRLKLC 849


>gi|20357585 TBP-associated factor 1 isoform 1 [Homo sapiens]
          Length = 1893

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 24/118 (20%), Positives = 50/118 (42%), Gaps = 7/118 (5%)

Query: 26  PAQVVAAIDVNTVANEVYKYNFPHTQ-LLAKTIEGITLEEFDRLSFDMILMSPPCQPFTR 84
           P Q++ A + N     +Y +  P T  L+ +T +G  + E      D+ ++   C  F  
Sbjct: 757 PGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQGYYIREL----VDIFVVGQQCPLFEV 812

Query: 85  IGRQGDMTDSRTNSFLH--ILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENC 140
            G      ++    FL   I  +  + +  P+ I +E++K    S +   + + ++ C
Sbjct: 813 PGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSIRKRLKLC 870


>gi|24429572 TBP-associated factor RNA polymerase 1-like [Homo
           sapiens]
          Length = 1826

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 25/118 (21%), Positives = 50/118 (42%), Gaps = 7/118 (5%)

Query: 26  PAQVVAAIDVNTVANEVYKYNFPHTQ-LLAKTIEGITLEEFDRLSFDMILMSPPCQPFTR 84
           P Q++ A++ N     VY +  P T  L+ +T +G  + E      D+ ++   C  F  
Sbjct: 755 PGQLLQALENNLFRAPVYLHKMPETDFLIIRTRQGYYIREL----VDIFVVGQQCPLFEV 810

Query: 85  IGRQGDMTDSRTNSFLH--ILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENC 140
            G      +     FL   I  +  + +  P+ I +E++K    S +   + + ++ C
Sbjct: 811 PGPNSRRANMHIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSIRKRLKLC 868


>gi|50083293 coiled-coil domain containing 123 [Homo sapiens]
          Length = 783

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 19/104 (18%)

Query: 165 LIAKLQSEPLPFQAPGQVLMEFPKIESVHPQKYAMDVE-NKIQEKNVEPNISFDGSIQCS 223
           L ++LQ E    +A  + LME  K+  +  QK ++ +E N + E+N              
Sbjct: 520 LKSQLQKEEEKERAEMEELME--KLTVLQAQKKSLLLEKNSLTEQN-------------- 563

Query: 224 GKDAILFKLETAEEIHRKNQQDSDLSVKMLKDFLEDDTDVNQYL 267
              A+  +LE A++I+RK+Q+  ++  K ++  + ++   +QYL
Sbjct: 564 --KALEAELERAQKINRKSQKKIEVLKKQVEKAMGNEMSAHQYL 605


>gi|110349750 malonyl-CoA decarboxylase precursor [Homo sapiens]
          Length = 493

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 13/43 (30%), Positives = 25/43 (58%)

Query: 163 YFLIAKLQSEPLPFQAPGQVLMEFPKIESVHPQKYAMDVENKI 205
           +F    L  E + + +P +VL +  + E+VHP K  MD++ ++
Sbjct: 189 WFSSGFLNLERVTWHSPCEVLQKISEAEAVHPVKNWMDMKRRV 231


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.138    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,159,906
Number of Sequences: 37866
Number of extensions: 599951
Number of successful extensions: 1376
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1360
Number of HSP's gapped (non-prelim): 25
length of query: 391
length of database: 18,247,518
effective HSP length: 104
effective length of query: 287
effective length of database: 14,309,454
effective search space: 4106813298
effective search space used: 4106813298
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.