BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|47578113 hypothetical protein LOC140699 isoform 3 [Homo sapiens] (573 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|47578113 hypothetical protein LOC140699 isoform 3 [Homo sapiens] 1131 0.0 gi|47578111 hypothetical protein LOC140699 isoform 2 [Homo sapiens] 1111 0.0 gi|194595501 hypothetical protein LOC140699 isoform 1 [Homo sapi... 1106 0.0 gi|223278410 hypothetical protein LOC374977 [Homo sapiens] 117 4e-26 gi|113420243 PREDICTED: hypothetical protein LOC377711 isoform 5... 90 5e-18 gi|150010654 HEAT repeat containing 7A isoform 1 [Homo sapiens] 90 5e-18 gi|148727311 hypothetical protein LOC389690 [Homo sapiens] 71 3e-12 gi|239748007 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens] 69 1e-11 gi|239741905 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens] 69 1e-11 gi|239753442 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens] 68 2e-11 gi|154240671 HEAT repeat family member 7B2 [Homo sapiens] 57 4e-08 gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo ... 31 2.7 gi|28626504 fermitin family homolog 3 short form [Homo sapiens] 31 3.5 gi|148833513 RNA binding motif protein 47 isoform a [Homo sapiens] 31 3.5 gi|182507165 thymus expressed gene 3-like [Homo sapiens] 31 3.5 gi|188536004 zinc finger protein 469 [Homo sapiens] 30 4.6 gi|113427525 PREDICTED: similar to hCG2037003 [Homo sapiens] 30 6.0 gi|148806881 hypothetical protein LOC57608 [Homo sapiens] 30 6.0 gi|148886716 downstream of Stk11 [Homo sapiens] 30 6.0 gi|105990532 apolipoprotein B precursor [Homo sapiens] 30 7.8 gi|51873064 mannosidase, alpha, class 2B, member 1 precursor [Ho... 30 7.8 gi|11342664 myxovirus resistance protein 2 [Homo sapiens] 30 7.8 >gi|47578113 hypothetical protein LOC140699 isoform 3 [Homo sapiens] Length = 573 Score = 1131 bits (2926), Expect = 0.0 Identities = 573/573 (100%), Positives = 573/573 (100%) Query: 1 MPLSRRGRGSRLAGSRAATSNLPRATALSPKSAGRGALSISHAQLLTRRRHSSEQVPPES 60 MPLSRRGRGSRLAGSRAATSNLPRATALSPKSAGRGALSISHAQLLTRRRHSSEQVPPES Sbjct: 1 MPLSRRGRGSRLAGSRAATSNLPRATALSPKSAGRGALSISHAQLLTRRRHSSEQVPPES 60 Query: 61 EPRADFRSGKWLQEPATGDARDSRQALRARMSSKHRICSQEEVVIPCAYDSDSESVDLEL 120 EPRADFRSGKWLQEPATGDARDSRQALRARMSSKHRICSQEEVVIPCAYDSDSESVDLEL Sbjct: 61 EPRADFRSGKWLQEPATGDARDSRQALRARMSSKHRICSQEEVVIPCAYDSDSESVDLEL 120 Query: 121 SNLEIIKKGSSSIELTDLDIPDIPGLHCEPLSHSPRHLTQQDPLSEAIVEKLIQSIQKVF 180 SNLEIIKKGSSSIELTDLDIPDIPGLHCEPLSHSPRHLTQQDPLSEAIVEKLIQSIQKVF Sbjct: 121 SNLEIIKKGSSSIELTDLDIPDIPGLHCEPLSHSPRHLTQQDPLSEAIVEKLIQSIQKVF 180 Query: 181 NGELKGELEKLKFLGDLSSLSQALPYDETAKSFIHSHIADIVHTLNVLVQEERPHSLSSS 240 NGELKGELEKLKFLGDLSSLSQALPYDETAKSFIHSHIADIVHTLNVLVQEERPHSLSSS Sbjct: 181 NGELKGELEKLKFLGDLSSLSQALPYDETAKSFIHSHIADIVHTLNVLVQEERPHSLSSS 240 Query: 241 MRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLPSVRTLTQIQEIMPNGTCNT 300 MRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLPSVRTLTQIQEIMPNGTCNT Sbjct: 241 MRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLPSVRTLTQIQEIMPNGTCNT 300 Query: 301 ECLYRQTFQAFSEMLQSLVVKDPHLENLDTIIKLPLRFQRLGHLVALMALLCGDPQEKVA 360 ECLYRQTFQAFSEMLQSLVVKDPHLENLDTIIKLPLRFQRLGHLVALMALLCGDPQEKVA Sbjct: 301 ECLYRQTFQAFSEMLQSLVVKDPHLENLDTIIKLPLRFQRLGHLVALMALLCGDPQEKVA 360 Query: 361 EEAAEGIHSLLHITLRLKYITHDKKDQQNLKRALTKCREFLELHSSAAKCFYNCPFRIAQ 420 EEAAEGIHSLLHITLRLKYITHDKKDQQNLKRALTKCREFLELHSSAAKCFYNCPFRIAQ Sbjct: 361 EEAAEGIHSLLHITLRLKYITHDKKDQQNLKRALTKCREFLELHSSAAKCFYNCPFRIAQ 420 Query: 421 VFEGFLDSNELCQFIMTTFDTLKNLKHPCIQRSAGELLLTLAKNTESQFEKVPEIMGVIC 480 VFEGFLDSNELCQFIMTTFDTLKNLKHPCIQRSAGELLLTLAKNTESQFEKVPEIMGVIC Sbjct: 421 VFEGFLDSNELCQFIMTTFDTLKNLKHPCIQRSAGELLLTLAKNTESQFEKVPEIMGVIC 480 Query: 481 AQLSIISQPRVRQQIINTVSLFISRPKYTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPS 540 AQLSIISQPRVRQQIINTVSLFISRPKYTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPS Sbjct: 481 AQLSIISQPRVRQQIINTVSLFISRPKYTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPS 540 Query: 541 TTWILWRLLRKLQKCHNEPAQEKMAYVAVAVSP 573 TTWILWRLLRKLQKCHNEPAQEKMAYVAVAVSP Sbjct: 541 TTWILWRLLRKLQKCHNEPAQEKMAYVAVAVSP 573 >gi|47578111 hypothetical protein LOC140699 isoform 2 [Homo sapiens] Length = 608 Score = 1111 bits (2874), Expect = 0.0 Identities = 572/608 (94%), Positives = 572/608 (94%), Gaps = 35/608 (5%) Query: 1 MPLSRRGRGSRLAGSRAATSNLPRATALSPKSAGRGALSISHAQLLTRRRHSSEQVPPES 60 MPLSRRGRGSRLAGSRAATSNLPRATALSPKSAGRGALSISHAQLLTRRRHSSEQVPPES Sbjct: 1 MPLSRRGRGSRLAGSRAATSNLPRATALSPKSAGRGALSISHAQLLTRRRHSSEQVPPES 60 Query: 61 EPRADFRSGKWLQEPATGDARDSRQALRARMSSKHRICSQEEVVIPCAYDSDSESVDLEL 120 EPRADFRSGKWLQEPATGDARDSRQALRARMSSKHRICSQEEVVIPCAYDSDSESVDLEL Sbjct: 61 EPRADFRSGKWLQEPATGDARDSRQALRARMSSKHRICSQEEVVIPCAYDSDSESVDLEL 120 Query: 121 SNLEIIKKGSSSIELTDLDIPDIPGLHCEPLSHSPRHLTQQDPLSEAIVEKLIQSIQKVF 180 SNLEIIKKGSSSIELTDLDIPDIPGLHCEPLSHSPRHLTQQDPLSEAIVEKLIQSIQKVF Sbjct: 121 SNLEIIKKGSSSIELTDLDIPDIPGLHCEPLSHSPRHLTQQDPLSEAIVEKLIQSIQKVF 180 Query: 181 NGELKGELEKLKFLGDLSSLSQALPYDETAKSFIHSHIADIVHTLNVLVQEERPHSLSSS 240 NGELKGELEKLKFLGDLSSLSQALPYDETAKSFIHSHIADIVHTLNVLVQEERPHSLSSS Sbjct: 181 NGELKGELEKLKFLGDLSSLSQALPYDETAKSFIHSHIADIVHTLNVLVQEERPHSLSSS 240 Query: 241 MRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLPSVRTLTQIQEIMPNGTCNT 300 MRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLPSVRTLTQIQEIMPNGTCNT Sbjct: 241 MRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLPSVRTLTQIQEIMPNGTCNT 300 Query: 301 ECLYRQTFQAFSEMLQSLVVKDPHLENLDTII---------------------------- 332 ECLYRQTFQAFSEMLQSLVVKDPHLENLDTII Sbjct: 301 ECLYRQTFQAFSEMLQSLVVKDPHLENLDTIIKHLVPWLQSVKDHERERATASMAQVLKC 360 Query: 333 -------KLPLRFQRLGHLVALMALLCGDPQEKVAEEAAEGIHSLLHITLRLKYITHDKK 385 KLPLRFQRLGHLVALMALLCGDPQEKVAEEAAEGIHSLLHITLRLKYITHDKK Sbjct: 361 LSKHLNLKLPLRFQRLGHLVALMALLCGDPQEKVAEEAAEGIHSLLHITLRLKYITHDKK 420 Query: 386 DQQNLKRALTKCREFLELHSSAAKCFYNCPFRIAQVFEGFLDSNELCQFIMTTFDTLKNL 445 DQQNLKRALTKCREFLELHSSAAKCFYNCPFRIAQVFEGFLDSNELCQFIMTTFDTLK L Sbjct: 421 DQQNLKRALTKCREFLELHSSAAKCFYNCPFRIAQVFEGFLDSNELCQFIMTTFDTLKTL 480 Query: 446 KHPCIQRSAGELLLTLAKNTESQFEKVPEIMGVICAQLSIISQPRVRQQIINTVSLFISR 505 KHPCIQRSAGELLLTLAKNTESQFEKVPEIMGVICAQLSIISQPRVRQQIINTVSLFISR Sbjct: 481 KHPCIQRSAGELLLTLAKNTESQFEKVPEIMGVICAQLSIISQPRVRQQIINTVSLFISR 540 Query: 506 PKYTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPSTTWILWRLLRKLQKCHNEPAQEKMA 565 PKYTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPSTTWILWRLLRKLQKCHNEPAQEKMA Sbjct: 541 PKYTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPSTTWILWRLLRKLQKCHNEPAQEKMA 600 Query: 566 YVAVAVSP 573 YVAVAVSP Sbjct: 601 YVAVAVSP 608 >gi|194595501 hypothetical protein LOC140699 isoform 1 [Homo sapiens] Length = 1052 Score = 1106 bits (2860), Expect = 0.0 Identities = 569/607 (93%), Positives = 570/607 (93%), Gaps = 35/607 (5%) Query: 1 MPLSRRGRGSRLAGSRAATSNLPRATALSPKSAGRGALSISHAQLLTRRRHSSEQVPPES 60 MPLSRRGRGSRLAGSRAATSNLPRATALSPKSAGRGALSISHAQLLTRRRHSSEQVPPES Sbjct: 1 MPLSRRGRGSRLAGSRAATSNLPRATALSPKSAGRGALSISHAQLLTRRRHSSEQVPPES 60 Query: 61 EPRADFRSGKWLQEPATGDARDSRQALRARMSSKHRICSQEEVVIPCAYDSDSESVDLEL 120 EPRADFRSGKWLQEPATGDARDSRQALRARMSSKHRICSQEEVVIPCAYDSDSESVDLEL Sbjct: 61 EPRADFRSGKWLQEPATGDARDSRQALRARMSSKHRICSQEEVVIPCAYDSDSESVDLEL 120 Query: 121 SNLEIIKKGSSSIELTDLDIPDIPGLHCEPLSHSPRHLTQQDPLSEAIVEKLIQSIQKVF 180 SNLEIIKKGSSSIELTDLDIPDIPGLHCEPLSHSPRHLTQQDPLSEAIVEKLIQSIQKVF Sbjct: 121 SNLEIIKKGSSSIELTDLDIPDIPGLHCEPLSHSPRHLTQQDPLSEAIVEKLIQSIQKVF 180 Query: 181 NGELKGELEKLKFLGDLSSLSQALPYDETAKSFIHSHIADIVHTLNVLVQEERPHSLSSS 240 NGELKGELEKLKFLGDLSSLSQALPYDETAKSFIHSHIADIVHTLNVLVQEERPHSLSSS Sbjct: 181 NGELKGELEKLKFLGDLSSLSQALPYDETAKSFIHSHIADIVHTLNVLVQEERPHSLSSS 240 Query: 241 MRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLPSVRTLTQIQEIMPNGTCNT 300 MRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLPSVRTLTQIQEIMPNGTCNT Sbjct: 241 MRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLPSVRTLTQIQEIMPNGTCNT 300 Query: 301 ECLYRQTFQAFSEMLQSLVVKDPHLENLDTII---------------------------- 332 ECLYRQTFQAFSEMLQSLVVKDPHLENLDTII Sbjct: 301 ECLYRQTFQAFSEMLQSLVVKDPHLENLDTIIKHLVPWLQSVKDHERERATASMAQVLKC 360 Query: 333 -------KLPLRFQRLGHLVALMALLCGDPQEKVAEEAAEGIHSLLHITLRLKYITHDKK 385 KLPLRFQRLGHLVALMALLCGDPQEKVAEEAAEGIHSLLHITLRLKYITHDKK Sbjct: 361 LSKHLNLKLPLRFQRLGHLVALMALLCGDPQEKVAEEAAEGIHSLLHITLRLKYITHDKK 420 Query: 386 DQQNLKRALTKCREFLELHSSAAKCFYNCPFRIAQVFEGFLDSNELCQFIMTTFDTLKNL 445 DQQNLKRALTKCREFLELHSSAAKCFYNCPFRIAQVFEGFLDSNELCQFIMTTFDTLK L Sbjct: 421 DQQNLKRALTKCREFLELHSSAAKCFYNCPFRIAQVFEGFLDSNELCQFIMTTFDTLKTL 480 Query: 446 KHPCIQRSAGELLLTLAKNTESQFEKVPEIMGVICAQLSIISQPRVRQQIINTVSLFISR 505 KHPCIQRSAGELLLTLAKNTESQFEKVPEIMGVICAQLSIISQPRVRQQIINTVSLFISR Sbjct: 481 KHPCIQRSAGELLLTLAKNTESQFEKVPEIMGVICAQLSIISQPRVRQQIINTVSLFISR 540 Query: 506 PKYTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPSTTWILWRLLRKLQKCHNEPAQEKMA 565 PKYTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPSTTWILWRLLRKLQKCHNEPAQEKMA Sbjct: 541 PKYTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPSTTWILWRLLRKLQKCHNEPAQEKMA 600 Query: 566 YVAVAVS 572 YVAVA + Sbjct: 601 YVAVAAT 607 >gi|223278410 hypothetical protein LOC374977 [Homo sapiens] Length = 1323 Score = 117 bits (292), Expect = 4e-26 Identities = 100/355 (28%), Positives = 165/355 (46%), Gaps = 54/355 (15%) Query: 229 VQEERPHSLSSSMRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLPSVRTLTQ 288 +QEE SLSSS+R++ + LS+ LG +R+EL ++ + S+ +LPSV+ + + Sbjct: 466 IQEEPLDSLSSSVRKQAMEILTQLSHTQP--TLGMRERSELVNVCVHSVFSLPSVQAMQE 523 Query: 289 IQEIMPNGTCNTECLYRQTFQAFSEMLQSLVVKDPHLENLDTIIK--------------- 333 E + LY QT +A +L++L ++DP L +I++ Sbjct: 524 KDEAKAE---TIQALYHQTLEALQTLLKALFIEDPTPAGLKSILEALGPWMNSGKAHERA 580 Query: 334 --------------------LPLRFQRLGHLVALMALLCGDPQEKVAEEAAEGIHSLLHI 373 +PL F LG L+ + L GDP E++ EA +GI +L+ Sbjct: 581 RAVNTNVSVLNHMLLTLPFFMPLGFPALGLLLGRLILHIGDPDEEIGCEALDGI-IILYT 639 Query: 374 TLRLKYITHDKKDQQNLKRALTKCREFLELHSSAAKCFYNCPFRIAQVFEGFLDSNELCQ 433 L L+ DK ++ N K + FL ++ + C R+ + F FL ++ Sbjct: 640 ILELQKRARDK-EETNKKELYESNKHFLGPYNPVSPC--QNILRVIEEFGDFLGPQQIKD 696 Query: 434 FIMTTFDTLKNLKHPC------IQRSAGELLLT--LAKNTESQFEKVPEIMGVICAQLSI 485 ++ + LK + + A E++L+ L E +PEIM I QLS Sbjct: 697 LLLAALEGLKGSSEAPGKDSREMMQLASEVMLSSVLEWYRHRALEVIPEIMQGIYMQLSH 756 Query: 486 ISQPRVRQQIINTVSLFISRPKYTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPS 540 I +PR RQ + VSL S T++V++ L+C P+P N + AE+WR L + PS Sbjct: 757 IQEPRARQVALLPVSLLAS-SFMTEVVVALLMC-PLPLNSNGAEMWRQLILCKPS 809 >gi|113420243 PREDICTED: hypothetical protein LOC377711 isoform 5 [Homo sapiens] Length = 1218 Score = 90.1 bits (222), Expect = 5e-18 Identities = 100/420 (23%), Positives = 185/420 (44%), Gaps = 53/420 (12%) Query: 183 ELKGELEKLKFLGDLSSLSQALPYDETAKSFIHSHIADIVHTLNVLVQEERPHSLSSSMR 242 E K KL + + +S+A+ A SF + A++V + ++ E P SL + +R Sbjct: 359 ETKDPALKLCLVQSVCMVSRAICSSTQAGSFHFTRKAELVAQMMEFIRAEPPDSLRTPIR 418 Query: 243 QEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLPSVRTLTQIQEIMPNGTCNTEC 302 ++ +T L V L + RA++ + SI+ L L + +E +G C + Sbjct: 419 KKAMLTCTYLV--SVEPALDEQARADVIHGCLHSIMAL-----LPEPKE--EDGGCQ-KS 468 Query: 303 LYRQTFQAFSEMLQSLVVKDPH-------LENLDTIIKLP-------------------- 335 LY +T A ++L SL+ ++ +E+L IK P Sbjct: 469 LYLETLHALEDLLTSLLQRNMTPQGLQIMIEHLSPWIKSPRGHERARALGLSALLLRYFL 528 Query: 336 --------LRFQRLGHLVALMALLCGDPQEKVAEEAAEGIHSLLHITLRLKYITHDKKDQ 387 + F LG L+ L + C D +EA + ++SLL++ L + + D +D Sbjct: 529 EHLRVSALVPFHNLGLLIGLFSPRCADLWPATRQEAVDCVYSLLYLQLGYEGFSRDYRD- 587 Query: 388 QNLKRALTKCREFLELHSSAAKCFYNCPFRIAQVFEGFLDSNELCQFIMTTFDTLKNLKH 447 ++ L ++ L +H A F+ C + Q+ L ++L ++T F+ L + + Sbjct: 588 -DVAERLLSLKDGL-VHPDPAILFHTC-HSVGQIIAKRLPPDQLISLLLTMFEALGDPEK 644 Query: 448 PCIQRSAGELLLTLAKNTESQFEKVPEIMGVICAQLSIISQPRVRQQIINTVSLFISRPK 507 C + + + L + EKVPEI+ V+ ++L V ++V L ++ Sbjct: 645 NCSRAATVMINCLLQERGGVLQEKVPEIVSVLRSKLQEAQGEHVLPAAQHSVYLLATQ-- 702 Query: 508 YTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPSTTWILWRLLRKLQKCHNEPAQEKMAYV 567 + V+S LL P+P + H +WR L+VE +L LL K+ + + P +E A++ Sbjct: 703 HCAAVVSSLLGSPLPLDSHTCMLWRALAVEPRLAAQVLGLLLEKMSR--DVPFKESRAFL 760 >gi|150010654 HEAT repeat containing 7A isoform 1 [Homo sapiens] Length = 1641 Score = 90.1 bits (222), Expect = 5e-18 Identities = 100/420 (23%), Positives = 185/420 (44%), Gaps = 53/420 (12%) Query: 183 ELKGELEKLKFLGDLSSLSQALPYDETAKSFIHSHIADIVHTLNVLVQEERPHSLSSSMR 242 E K KL + + +S+A+ A SF + A++V + ++ E P SL + +R Sbjct: 782 ETKDPALKLCLVQSVCMVSRAICSSTQAGSFHFTRKAELVAQMMEFIRAEPPDSLRTPIR 841 Query: 243 QEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLPSVRTLTQIQEIMPNGTCNTEC 302 ++ +T L V L + RA++ + SI+ L L + +E +G C + Sbjct: 842 KKAMLTCTYLV--SVEPALDEQARADVIHGCLHSIMAL-----LPEPKE--EDGGCQ-KS 891 Query: 303 LYRQTFQAFSEMLQSLVVKDPH-------LENLDTIIKLP-------------------- 335 LY +T A ++L SL+ ++ +E+L IK P Sbjct: 892 LYLETLHALEDLLTSLLQRNMTPQGLQIMIEHLSPWIKSPRGHERARALGLSALLLRYFL 951 Query: 336 --------LRFQRLGHLVALMALLCGDPQEKVAEEAAEGIHSLLHITLRLKYITHDKKDQ 387 + F LG L+ L + C D +EA + ++SLL++ L + + D +D Sbjct: 952 EHLRVSALVPFHNLGLLIGLFSPRCADLWPATRQEAVDCVYSLLYLQLGYEGFSRDYRD- 1010 Query: 388 QNLKRALTKCREFLELHSSAAKCFYNCPFRIAQVFEGFLDSNELCQFIMTTFDTLKNLKH 447 ++ L ++ L +H A F+ C + Q+ L ++L ++T F+ L + + Sbjct: 1011 -DVAERLLSLKDGL-VHPDPAILFHTC-HSVGQIIAKRLPPDQLISLLLTMFEALGDPEK 1067 Query: 448 PCIQRSAGELLLTLAKNTESQFEKVPEIMGVICAQLSIISQPRVRQQIINTVSLFISRPK 507 C + + + L + EKVPEI+ V+ ++L V ++V L ++ Sbjct: 1068 NCSRAATVMINCLLQERGGVLQEKVPEIVSVLRSKLQEAQGEHVLPAAQHSVYLLATQ-- 1125 Query: 508 YTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPSTTWILWRLLRKLQKCHNEPAQEKMAYV 567 + V+S LL P+P + H +WR L+VE +L LL K+ + + P +E A++ Sbjct: 1126 HCAAVVSSLLGSPLPLDSHTCMLWRALAVEPRLAAQVLGLLLEKMSR--DVPFKESRAFL 1183 >gi|148727311 hypothetical protein LOC389690 [Homo sapiens] Length = 1318 Score = 70.9 bits (172), Expect = 3e-12 Identities = 95/470 (20%), Positives = 182/470 (38%), Gaps = 96/470 (20%) Query: 169 VEKLIQSIQKVFNGELKGELEKLKFLGDLSSLSQALPYDETAKSFIHSHIADIVHTLNVL 228 V+ ++ + F+ E K FL L A+ E A S+ ++++ L VL Sbjct: 398 VDNIVSRMVFYFHYSSWDETLKQSFLTATLMLMGAVSRSEGAHSYEFFQTSELLQCLMVL 457 Query: 229 VQEERPHSLSSSMRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLPSVRTLTQ 288 +++E +L + RQ+ + L + + E +++L S +S+ LP + L + Sbjct: 458 MEKEPQDTLCTRSRQQAMHIASSLC--KLRPPIDLERKSQLLSTCFRSVFALPLLDALEK 515 Query: 289 IQEIM---PNGTC-------------------------NTECLYRQTFQAFSEMLQSLVV 320 + PN + + LY +T +A MLQSL++ Sbjct: 516 HTCLFLEPPNIQLWPVARERAGWTHQGWGPRAVLHCSEHLQSLYSRTMEALDFMLQSLIM 575 Query: 321 KDPHLENLDTIIK----------------------LPLRF-------------QRLGHLV 345 ++P + L ++ + L+F +R+G LV Sbjct: 576 QNPTADELHFLLSHLYIWLASEKAHERQRAVHSCMILLKFLNHNGYLDPKEDFKRIGQLV 635 Query: 346 ALMALLCGDPQEKVAEEAAEGIHSLLHITLRLKYITHDKKDQQNLKRALTKCREFLELHS 405 ++ +LC DP + EG L + + K + L+ +E + HS Sbjct: 636 GILGMLCQDPDRATQRCSLEGASHLYQLLM-------CHKTGEALQAESQAPKELSQAHS 688 Query: 406 SAA---------------------KCFYNCPFRIAQVFEGFLDSNELCQFIMTTFDTLKN 444 A F C F++ + L EL I T D L + Sbjct: 689 DGAPLWNSRDQKATPLGPQEMAKNHIFQLCSFQVIKDIMQQLTLAELSDLIWTAIDGLGS 748 Query: 445 LKHPCIQRSAGELLLTLAKNTESQFEKVPEIMGVICAQLSIISQPRVRQQIINTVSLFIS 504 P ++A E+LLT + ++ E V + I +L + P+ +++ ++ ++L ++ Sbjct: 749 TS-PFRVQAASEMLLTAVQEHGAKLEIVSSMAQAIRLRLCSVHIPQAKEKTLHAITL-LA 806 Query: 505 RPKYTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPSTTWILWRLLRKLQK 554 R ++V +FL +P + H ++WR L P++ +L LL LQ+ Sbjct: 807 RSHTCELVATFLNI-SIPLDSHTFQLWRALGAGQPTSHLVLTTLLACLQE 855 >gi|239748007 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens] Length = 1706 Score = 68.9 bits (167), Expect = 1e-11 Identities = 87/424 (20%), Positives = 176/424 (41%), Gaps = 59/424 (13%) Query: 163 PLSEAIVEKLIQSIQKVFNGELKGELEKLKFLGDLSSLSQALPYDETAKSFIHSHIADIV 222 P++ I+ + S Q + K+ F+ + +++A+ + + F + + Sbjct: 832 PITAKIIHHYVSSCQDI--------CLKMAFMKSVVQVTKAINNIKDLEDFHFAQKTTLT 883 Query: 223 HTLNVLVQEERPHSLSSSMRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLP- 281 + +++ E +L S +R ++ LS + +E+ +EL ++I S+I+L Sbjct: 884 SIIVAVIKAEPTDNLVSPVRALAMEALSHLS--KLKPFYSTEENSELMDISIHSVISLQL 941 Query: 282 ------SVRTL-----TQIQEIMPNGTCNTECLYRQT----FQAFSEMLQSLVVKDPHLE 326 S++TL + ++++M + L RQ Q ++L+ ++ + E Sbjct: 942 PGEDNESIKTLYANALSSLEQLMES------LLQRQLDPKGLQEMVQLLEKWILSEKEWE 995 Query: 327 NL---------------DTIIKLPLRFQRLGHLVALMALLCGDPQEKVAEEAAEGIHSLL 371 T + + L+ + G +V L+A D ++ + + SLL Sbjct: 996 REKAVSLHLYLMRIYVHSTAVCIHLKLGQFGTMVGLIAPCTCDAHQRTRMASMNVLSSLL 1055 Query: 372 HITLRLKYITHDKKDQQNLKRALTKCREFLELHSSAAKCFYNCPFRIAQVFEGFLDSNEL 431 + Q+ L+ KC+ +L S+ + + RIA+V +E+ Sbjct: 1056 DLHASQTCSLWGPSKQKELE----KCKG--DLQSTDVEKIFCASSRIAKVVCMEFSCDEV 1109 Query: 432 CQFIMTTFDTL--KNLKHPCIQRSAGELLLTLAKNTESQFEKVPEIMGVICAQLSIISQP 489 I + NL+H + S + L + +KV EI+ I L ++ P Sbjct: 1110 VSLIQKLCENTGAMNLQHD--KASVTWIAFFLQMRAKELEDKVAEILSAILVHLPVVDHP 1167 Query: 490 RVRQQIINTVSLFISRPKYTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPSTTWILWRLL 549 VR+ +I+ + L + T +L+ LL P+P HLAEVW +S +P +L L+ Sbjct: 1168 EVRRLLIDGILLLAHHHQET--ILTSLLRQPLPMESHLAEVWLAVSENVPFARTMLHSLM 1225 Query: 550 RKLQ 553 +LQ Sbjct: 1226 GRLQ 1229 >gi|239741905 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens] Length = 1710 Score = 68.9 bits (167), Expect = 1e-11 Identities = 87/424 (20%), Positives = 176/424 (41%), Gaps = 59/424 (13%) Query: 163 PLSEAIVEKLIQSIQKVFNGELKGELEKLKFLGDLSSLSQALPYDETAKSFIHSHIADIV 222 P++ I+ + S Q + K+ F+ + +++A+ + + F + + Sbjct: 832 PITAKIIHHYVSSCQDI--------CLKMAFMKSVVQVTKAINNIKDLEDFHFAQKTTLT 883 Query: 223 HTLNVLVQEERPHSLSSSMRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLP- 281 + +++ E +L S +R ++ LS + +E+ +EL ++I S+I+L Sbjct: 884 SIIVAVIKAEPTDNLVSPVRALAMEALSHLS--KLKPFYSTEENSELMDISIHSVISLQL 941 Query: 282 ------SVRTL-----TQIQEIMPNGTCNTECLYRQT----FQAFSEMLQSLVVKDPHLE 326 S++TL + ++++M + L RQ Q ++L+ ++ + E Sbjct: 942 PGEDNESIKTLYANALSSLEQLMES------LLQRQLDPKGLQEMVQLLEKWILSEKEWE 995 Query: 327 NL---------------DTIIKLPLRFQRLGHLVALMALLCGDPQEKVAEEAAEGIHSLL 371 T + + L+ + G +V L+A D ++ + + SLL Sbjct: 996 REKAVSLHLYLMWIYVHSTAVCIHLKLGQFGTMVGLIAPCTCDAHQRTRMASMNVLSSLL 1055 Query: 372 HITLRLKYITHDKKDQQNLKRALTKCREFLELHSSAAKCFYNCPFRIAQVFEGFLDSNEL 431 + Q+ L+ KC+ +L S+ + + RIA+V +E+ Sbjct: 1056 DLHASQTCSLWGPSKQKELE----KCKG--DLQSTDVEKIFCASSRIAKVVCMEFSCDEV 1109 Query: 432 CQFIMTTFDTL--KNLKHPCIQRSAGELLLTLAKNTESQFEKVPEIMGVICAQLSIISQP 489 I + NL+H + S + L + +KV EI+ I L ++ P Sbjct: 1110 VSLIQKLCENTGAMNLQHD--KASVTWIAFFLQMRAKELEDKVAEILSAILVHLPVVDHP 1167 Query: 490 RVRQQIINTVSLFISRPKYTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPSTTWILWRLL 549 VR+ +I+ + L + T +L+ LL P+P HLAEVW +S +P +L L+ Sbjct: 1168 EVRRLLIDGILLLAHHHQET--ILTSLLRQPLPMESHLAEVWLAVSENVPFARTMLHSLM 1225 Query: 550 RKLQ 553 +LQ Sbjct: 1226 GRLQ 1229 >gi|239753442 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens] Length = 1723 Score = 68.2 bits (165), Expect = 2e-11 Identities = 87/424 (20%), Positives = 176/424 (41%), Gaps = 59/424 (13%) Query: 163 PLSEAIVEKLIQSIQKVFNGELKGELEKLKFLGDLSSLSQALPYDETAKSFIHSHIADIV 222 P++ I+ + S Q + K+ F+ + +++A+ + + F + + Sbjct: 835 PITAKIIHHYVSSCQDI--------CLKMAFMKSVVQVTKAINNIKDLEDFHFAQKTTLT 886 Query: 223 HTLNVLVQEERPHSLSSSMRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLP- 281 + +++ E +L S +R ++ LS + +E+ +EL ++I S+I+L Sbjct: 887 SIIVAVIKAEPTDNLVSPVRALAMEALSHLS--KLKPFYSTEENSELMDISIHSVISLQL 944 Query: 282 ------SVRTL-----TQIQEIMPNGTCNTECLYRQT----FQAFSEMLQSLVVKDPHLE 326 S++TL + ++++M + L RQ Q ++L+ ++ + E Sbjct: 945 PGEDNESIKTLYANALSSLEQLMES------LLQRQLDPKGLQEMVQLLEKWILSEKEWE 998 Query: 327 NL---------------DTIIKLPLRFQRLGHLVALMALLCGDPQEKVAEEAAEGIHSLL 371 T + + L+ + G +V L+A D ++ + + SLL Sbjct: 999 REKAVSLHLYLMRIYVHSTAVCIHLKLGQFGTMVGLIAPCTCDAHQRTRMASMNVLSSLL 1058 Query: 372 HITLRLKYITHDKKDQQNLKRALTKCREFLELHSSAAKCFYNCPFRIAQVFEGFLDSNEL 431 + Q+ L+ KC+ +L S+ + + RIA+V +E+ Sbjct: 1059 DLHASQTCSLWGPSKQKELE----KCKG--DLQSTDVEKIFCASSRIAKVVCMEFSCDEV 1112 Query: 432 CQFIMTTFDTL--KNLKHPCIQRSAGELLLTLAKNTESQFEKVPEIMGVICAQLSIISQP 489 I + NL+H + S + L + +KV EI+ I L ++ P Sbjct: 1113 VSLIQKLCENTGAMNLQHD--KASVTWIASFLQMRAKELEDKVAEILSAILVHLPVVDHP 1170 Query: 490 RVRQQIINTVSLFISRPKYTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPSTTWILWRLL 549 VR+ +I+ + L + T +L+ LL P+P HLAEVW +S +P +L L+ Sbjct: 1171 EVRRLLIDGILLLAHHHQET--ILTSLLRQPLPMESHLAEVWLAVSENVPFARTMLHSLM 1228 Query: 550 RKLQ 553 +LQ Sbjct: 1229 GRLQ 1232 >gi|154240671 HEAT repeat family member 7B2 [Homo sapiens] Length = 1585 Score = 57.4 bits (137), Expect = 4e-08 Identities = 78/379 (20%), Positives = 162/379 (42%), Gaps = 52/379 (13%) Query: 207 DETAKSFIHSHIADIVHTLNVLVQEERPHSLSSSMRQEVFVTIADLSYQDVHLLLGSEDR 266 D + F S+ ++ + +++E SL+S +R + + I LS L L +D Sbjct: 768 DAEDQGFQFSYKEMLIGYMLDFIRDEPLDSLASPIRWKALIAIRYLSKLKPQLSL--QDH 825 Query: 267 AELFSLTIKSIITLPSVRTLTQIQEIMPNGTCNTECLYRQTFQAFSEMLQSLVVKDPHLE 326 + I+ ++ LP + L + + + + LY ++ A ++L++++ + + E Sbjct: 826 LNILEENIRRLLPLPPLENLKSEGQTDKDKE-HIQFLYERSMDALGKLLKTMMWDNVNAE 884 Query: 327 N------------------------------LDTIIKLPLRFQRLGHLVALMALLCGDPQ 356 + L I+ P F ++G L+ L+A D Sbjct: 885 DCQEMFNLLQMWLVSQKEWERERAFQITAKVLTNDIEAPENF-KIGSLLGLLAPHSCDTL 943 Query: 357 EKVAEEAAEGIHSLLHITLRLKYITHDKKDQQNLKRALTKCREFLELHSSAAKCFYNCPF 416 + + AA L +I K I + + Q L+ L +++ S+ Sbjct: 944 PTIRQAAASSTIGLFYI----KGIHLEVERLQGLQEGLESDDVQVQIKISS--------- 990 Query: 417 RIAQVFEGFLDSNELCQFIMTTFDTLKNLKHPCIQRSAGELLLTLAKNTESQFE-KVPEI 475 +IA++ F+ + E+ F+ D L++L C ++ G ++T+ K + E ++ EI Sbjct: 991 KIAKIVSKFIPNEEILMFLEEMLDGLESLNPTCT-KACGIWMITVLKQQGAALEDQLLEI 1049 Query: 476 MGVICAQLSIISQPRVRQQ-IINTVSLFISRPKYTDIVLSFLLCHPVPYNRHLAEVWRML 534 +G I + ++ Q Q I+ +S S + D V+ LL P+P++R +W+ L Sbjct: 1050 LGTIYHHMPVLRQKEESFQFILEAISQIASF--HMDTVVVNLLQKPLPFDRDTKTLWKAL 1107 Query: 535 SVELPSTTWILWRLLRKLQ 553 + + S+ +L L+ KL+ Sbjct: 1108 AEKPASSGKLLQALIDKLE 1126 >gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo sapiens] Length = 944 Score = 31.2 bits (69), Expect = 2.7 Identities = 26/103 (25%), Positives = 39/103 (37%), Gaps = 6/103 (5%) Query: 3 LSRRGRGSRLAGSRAATSNLPR------ATALSPKSAGRGALSISHAQLLTRRRHSSEQV 56 L RGRG G A L + L + A G L+ HA +L + E + Sbjct: 731 LGGRGRGGGTRGGGGAVRALVQQQVGGVGEGLGAERAAEGPLARVHALVLPQVGALREAL 790 Query: 57 PPESEPRADFRSGKWLQEPATGDARDSRQALRARMSSKHRICS 99 P +S P G + A+RARM ++ +C+ Sbjct: 791 PADSTGVGPLAGVHVAVAPQAGRVLEGLGAVRARMKARRPVCT 833 >gi|28626504 fermitin family homolog 3 short form [Homo sapiens] Length = 663 Score = 30.8 bits (68), Expect = 3.5 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 95 HRICSQEEVVIPCAYDSDSESVDLELSNLEIIKKGSSSIELTDLDIPDIPGLHCEPLSHS 154 +++ EV P D + +D+ LSNLE+ +GS+ ++ D + IP L Sbjct: 302 NKLSQSGEVGEPAGTDPGLDDLDVALSNLEVKLEGSAPTDVLD-SLTTIPELKDHLRIFR 360 Query: 155 PRHLT 159 PR LT Sbjct: 361 PRKLT 365 >gi|148833513 RNA binding motif protein 47 isoform a [Homo sapiens] Length = 593 Score = 30.8 bits (68), Expect = 3.5 Identities = 36/115 (31%), Positives = 48/115 (41%), Gaps = 6/115 (5%) Query: 4 SRRGRGSRLAGSRAATSNLPRATALSPKSAGRGALSISHAQLLTRRRHSSEQVPPESEPR 63 S RGRG AG+RA PR + L SAGRG S H ++ E VP P Sbjct: 377 SIRGRGRGAAGNRAPG---PRGSYLGGYSAGRGIYSRYHEGKGKQQEKGYELVPNLEIPT 433 Query: 64 ADFRSGK--WLQEPATGDARDSRQALRA-RMSSKHRICSQEEVVIPCAYDSDSES 115 + + K + PA G A A +M +I + E ++ P A D S Sbjct: 434 VNPVAIKPGTVAIPAIGAQYSMFPAAPAPKMIEDGKIHTVEHMISPIAVQPDPAS 488 >gi|182507165 thymus expressed gene 3-like [Homo sapiens] Length = 629 Score = 30.8 bits (68), Expect = 3.5 Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 15/80 (18%) Query: 12 LAGSRAATSNLP-RATALSPKSAGRGALSISHAQLLTRRRHSSEQVPPESEPRADFRSGK 70 + G++AAT LP RA P RG S EQ PP PRA R G+ Sbjct: 360 IPGAQAATRGLPGRAARRKPPPLTRG--------------RSVEQSPPRERPRAAGRRGR 405 Query: 71 WLQEPATGDARDSRQALRAR 90 + + +R+A R++ Sbjct: 406 MAEASGRRGSPRARKASRSQ 425 >gi|188536004 zinc finger protein 469 [Homo sapiens] Length = 3925 Score = 30.4 bits (67), Expect = 4.6 Identities = 44/171 (25%), Positives = 63/171 (36%), Gaps = 36/171 (21%) Query: 2 PLSRRGRGSRLAGSRAATSNLPRATALSPKSAGRGALS----ISHAQLLTRRRHSSEQVP 57 P +R +G+R AG +A LP A P+ A G L A T + S Q P Sbjct: 40 PATRTTKGAREAGGQAQAMELPEA---QPRQARDGELKPPSLRGQAPSSTPGKRGSPQTP 96 Query: 58 PESEPRADFRSGKWLQEPATGDARDSRQALRARMSSKHRICSQEEVVIPCAYDSDSESVD 117 P P LQ P SR A RA S R ++ A ++D Sbjct: 97 PGRSP---------LQAP-------SRLAGRAEGSPPQR------YILGIASSRTKPTLD 134 Query: 118 LELSNLEIIKKGSSSIELTDLDIPDIPGLHCEPLSHSPRHLTQQDPLSEAI 168 N ++ + +L ++D P PG PR T+ P +E + Sbjct: 135 ETPENPQL-----EAAQLPEVDTPQGPGTGAPLRPGLPR--TEAQPAAEEL 178 >gi|113427525 PREDICTED: similar to hCG2037003 [Homo sapiens] Length = 196 Score = 30.0 bits (66), Expect = 6.0 Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 6/96 (6%) Query: 5 RRGR-GSRLAGSRAATSNLPRATALSPKSAGRGALSISHAQLLTRRRHS----SEQVPPE 59 RRG GSR G A + P+ ++ +G GA S S AQ R S S+ P Sbjct: 57 RRGEPGSRGLGEGPAAARRPQVQSIDTTPSGEGAPSFSRAQRPGRSGPSPSLASDPAPGR 116 Query: 60 SEPRADFRSGKWLQE-PATGDARDSRQALRARMSSK 94 R GK Q + R SR+A A + + Sbjct: 117 GAAWGSLRPGKRQQALESEAGGRASREARAAEVRER 152 >gi|148806881 hypothetical protein LOC57608 [Homo sapiens] Length = 1359 Score = 30.0 bits (66), Expect = 6.0 Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 14/104 (13%) Query: 6 RGRGSRLAGSRAATS------NLPRATALSPKSAGRGALSISHAQLLTRRRHSSEQVPPE 59 +GR + G+RA + P A A SAG+G +S S ++ T R H Q Sbjct: 28 KGRQAARTGTRAGQGLQNGHEDGPAALAHRKTSAGKGHVSDSESRRSTPRGHGEPQSTSA 87 Query: 60 SE-PRADFRS---GKWLQEPATGD----ARDSRQALRARMSSKH 95 S A F + W P TG+ R RQ R++ +H Sbjct: 88 SRTSEAGFCNQPPSAWSSHPPTGNDQAYRRRGRQEARSQKPREH 131 >gi|148886716 downstream of Stk11 [Homo sapiens] Length = 447 Score = 30.0 bits (66), Expect = 6.0 Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 11/101 (10%) Query: 4 SRRGRGSRL-AGSRAATSNLPRATALSPKSAGRGALSISHAQLLTR-RRHSS-EQVPPES 60 S G G+ L AG+R+ + P A A P AG G+ + + Q LTR RRH+S + P Sbjct: 243 SDSGEGTSLDAGTRSTKAGGPGAAA-GPGEAGPGSGAGTVLQFLTRLRRHASLDGASPY- 300 Query: 61 EPRADFRSGKWLQEPATGDAR-DSRQALRARMSSKHRICSQ 100 F+ KW EP+ A D+R + + + R S+ Sbjct: 301 -----FKVKKWKLEPSQRAASLDTRGSPKRHHFQRQRAASE 336 >gi|105990532 apolipoprotein B precursor [Homo sapiens] Length = 4563 Score = 29.6 bits (65), Expect = 7.8 Identities = 15/58 (25%), Positives = 36/58 (62%), Gaps = 3/58 (5%) Query: 196 DLSSLSQALPYD--ETAKSFIHSHIADIVHTLNVLVQEERPHSLSSSMRQEVFVTIAD 251 D++ + Q LP++ E K+F+ SHIA+I+++ + +Q+ + + ++++ T+ D Sbjct: 573 DINKIVQILPWEQNEQVKNFVASHIANILNSEELDIQDLK-KLVKEALKESQLPTVMD 629 >gi|51873064 mannosidase, alpha, class 2B, member 1 precursor [Homo sapiens] Length = 1011 Score = 29.6 bits (65), Expect = 7.8 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 5/81 (6%) Query: 26 TALSPKSAGRGALSISHAQLLTRRRHSSEQVPPESEPRADFRSGKWLQEPATGDARDSRQ 85 T L+ +S G +L +L+ RR + SEP + SG W++ D+ Q Sbjct: 792 TVLTDRSQGGSSLRDGSLELMVHRRLLKDDGRGVSEPLMENGSGAWVRGRHL-VLLDTAQ 850 Query: 86 ALRARMSSKHRICSQEEVVIP 106 A A HR+ +++EV+ P Sbjct: 851 AAAA----GHRLLAEQEVLAP 867 >gi|11342664 myxovirus resistance protein 2 [Homo sapiens] Length = 715 Score = 29.6 bits (65), Expect = 7.8 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 8/68 (11%) Query: 112 DSESVDLELSNLEIIKKGSSSIELTDLDIPDIPGLHCEPLSHSPRHLTQQDPLSEAIVEK 171 + + EL +LEI +S E+ DL I D+PG+ + + PR + Q +A+++K Sbjct: 200 NGRGISHELISLEI-----TSPEVPDLTIIDLPGITRVAVDNQPRDIGLQ---IKALIKK 251 Query: 172 LIQSIQKV 179 IQ Q + Sbjct: 252 YIQRQQTI 259 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.320 0.133 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,812,024 Number of Sequences: 37866 Number of extensions: 887423 Number of successful extensions: 2722 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 12 Number of HSP's that attempted gapping in prelim test: 2692 Number of HSP's gapped (non-prelim): 33 length of query: 573 length of database: 18,247,518 effective HSP length: 108 effective length of query: 465 effective length of database: 14,157,990 effective search space: 6583465350 effective search space used: 6583465350 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.