Search of human proteins with 46852164

Search of human proteins with 46852164

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|46852164 mannosidase, alpha, class 2C, member 1 [Homo
sapiens]
         (1040 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|46852164 mannosidase, alpha, class 2C, member 1 [Homo sapiens]    2145   0.0  
gi|51477714 mannosidase, alpha, class 2A, member 1 [Homo sapiens]      47   1e-04
gi|51477716 mannosidase, alpha, class 2A, member 2 [Homo sapiens]      45   3e-04
gi|50659093 mannosidase, alpha, class 2B, member 2 [Homo sapiens]      44   8e-04
gi|102469037 jun D proto-oncogene [Homo sapiens]                       35   0.48 
gi|4506755 retinoid X receptor, alpha [Homo sapiens]                   35   0.48 
gi|156616271 kinesin family member 19 [Homo sapiens]                   34   0.63 
gi|156546910 BRAF35/HDAC2 complex isoform b [Homo sapiens]             31   6.9  
gi|156546894 BRAF35/HDAC2 complex isoform a [Homo sapiens]             31   6.9  
gi|154759423 Cdk5 and Abl enzyme substrate 1 isoform 2 [Homo sap...    31   6.9  
gi|42475941 zinc finger protein 261 [Homo sapiens]                     31   6.9  
gi|4827067 zinc finger protein 261 [Homo sapiens]                      31   6.9  
gi|4758844 nucleoporin 155kDa isoform 2 [Homo sapiens]                 31   6.9  
gi|24430149 nucleoporin 155kDa isoform 1 [Homo sapiens]                31   6.9  
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r...    30   9.1  
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r...    30   9.1  
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r...    30   9.1  
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r...    30   9.1  
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r...    30   9.1  
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r...    30   9.1  
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re...    30   9.1  
gi|239755911 PREDICTED: hypothetical protein [Homo sapiens]            30   9.1  
gi|239750425 PREDICTED: hypothetical protein XP_002347391 [Homo ...    30   9.1  
gi|239744727 PREDICTED: hypothetical protein XP_002343254 [Homo ...    30   9.1  
gi|156564405 catalytic phosphatidylinositol 3-kinase delta [Homo...    30   9.1  
gi|126507091 LATS, large tumor suppressor, homolog 2 [Homo sapiens]    30   9.1  
gi|210032580 SET domain containing 1B [Homo sapiens]                   30   9.1  

>gi|46852164 mannosidase, alpha, class 2C, member 1 [Homo sapiens]
          Length = 1040

 Score = 2145 bits (5558), Expect = 0.0
 Identities = 1040/1040 (100%), Positives = 1040/1040 (100%)

Query: 1    MAAAPALKHWRTTLERVEKFVSPLYFTDCNLRGRLFGASCPVAVLSSFLTPERLPYQEAV 60
            MAAAPALKHWRTTLERVEKFVSPLYFTDCNLRGRLFGASCPVAVLSSFLTPERLPYQEAV
Sbjct: 1    MAAAPALKHWRTTLERVEKFVSPLYFTDCNLRGRLFGASCPVAVLSSFLTPERLPYQEAV 60

Query: 61   QRDFRPAQVGDSFGPTWWTCWFRVELTIPEAWVGQEVHLCWESDGEGLVWRDGEPVQGLT 120
            QRDFRPAQVGDSFGPTWWTCWFRVELTIPEAWVGQEVHLCWESDGEGLVWRDGEPVQGLT
Sbjct: 61   QRDFRPAQVGDSFGPTWWTCWFRVELTIPEAWVGQEVHLCWESDGEGLVWRDGEPVQGLT 120

Query: 121  KEGEKTSYVLTDRLGERDPRSLTLYVEVACNGLLGAGKGSMIAAPDPEKMFQLSRAELAV 180
            KEGEKTSYVLTDRLGERDPRSLTLYVEVACNGLLGAGKGSMIAAPDPEKMFQLSRAELAV
Sbjct: 121  KEGEKTSYVLTDRLGERDPRSLTLYVEVACNGLLGAGKGSMIAAPDPEKMFQLSRAELAV 180

Query: 181  FHRDVHMLLVDLELLLGIAKGLGKDNQRSFQALYTANQMVNVCDPAQPETFPVAQALASR 240
            FHRDVHMLLVDLELLLGIAKGLGKDNQRSFQALYTANQMVNVCDPAQPETFPVAQALASR
Sbjct: 181  FHRDVHMLLVDLELLLGIAKGLGKDNQRSFQALYTANQMVNVCDPAQPETFPVAQALASR 240

Query: 241  FFGQHGGESQHTIHATGHCHIDTAWLWPFKETVRKCARSWVTALQLMERNPEFIFACSQA 300
            FFGQHGGESQHTIHATGHCHIDTAWLWPFKETVRKCARSWVTALQLMERNPEFIFACSQA
Sbjct: 241  FFGQHGGESQHTIHATGHCHIDTAWLWPFKETVRKCARSWVTALQLMERNPEFIFACSQA 300

Query: 301  QQLEWVKSRYPGLYSRIQEFACRGQFVPVGGTWVEMDGNLPSGEAMVRQFLQGQNFFLQE 360
            QQLEWVKSRYPGLYSRIQEFACRGQFVPVGGTWVEMDGNLPSGEAMVRQFLQGQNFFLQE
Sbjct: 301  QQLEWVKSRYPGLYSRIQEFACRGQFVPVGGTWVEMDGNLPSGEAMVRQFLQGQNFFLQE 360

Query: 361  FGKMCSEFWLPDTFGYSAQLPQIMHGCGIRRFLTQKLSWNLVNSFPHHTFFWEGLDGSRV 420
            FGKMCSEFWLPDTFGYSAQLPQIMHGCGIRRFLTQKLSWNLVNSFPHHTFFWEGLDGSRV
Sbjct: 361  FGKMCSEFWLPDTFGYSAQLPQIMHGCGIRRFLTQKLSWNLVNSFPHHTFFWEGLDGSRV 420

Query: 421  LVHFPPGDSYGMQGSVEEVLKTVANNRDKGRANHSAFLFGFGDGGGGPTQTMLDRLKRLS 480
            LVHFPPGDSYGMQGSVEEVLKTVANNRDKGRANHSAFLFGFGDGGGGPTQTMLDRLKRLS
Sbjct: 421  LVHFPPGDSYGMQGSVEEVLKTVANNRDKGRANHSAFLFGFGDGGGGPTQTMLDRLKRLS 480

Query: 481  NTDGLPRVQLSSPRQLFSALESDSEQLCTWVGELFLELHNGTYTTHAQIKKGNRECERIL 540
            NTDGLPRVQLSSPRQLFSALESDSEQLCTWVGELFLELHNGTYTTHAQIKKGNRECERIL
Sbjct: 481  NTDGLPRVQLSSPRQLFSALESDSEQLCTWVGELFLELHNGTYTTHAQIKKGNRECERIL 540

Query: 541  HDVELLSSLALARSAQFLYPAAQLQHLWRLLLLNQFHDVVTGSCIQMVAEEAMCHYEDIR 600
            HDVELLSSLALARSAQFLYPAAQLQHLWRLLLLNQFHDVVTGSCIQMVAEEAMCHYEDIR
Sbjct: 541  HDVELLSSLALARSAQFLYPAAQLQHLWRLLLLNQFHDVVTGSCIQMVAEEAMCHYEDIR 600

Query: 601  SHGNTLLSAAAAALCAGEPGPEGLLIVNTLPWKRIEVMALPKPGGAHSLALVTVPSMGYA 660
            SHGNTLLSAAAAALCAGEPGPEGLLIVNTLPWKRIEVMALPKPGGAHSLALVTVPSMGYA
Sbjct: 601  SHGNTLLSAAAAALCAGEPGPEGLLIVNTLPWKRIEVMALPKPGGAHSLALVTVPSMGYA 660

Query: 661  PVPPPTSLQPLLPQQPVFVVQETDGSVTLDNGIIRVKLDPTGRLTSLVLVASGREAIAEG 720
            PVPPPTSLQPLLPQQPVFVVQETDGSVTLDNGIIRVKLDPTGRLTSLVLVASGREAIAEG
Sbjct: 661  PVPPPTSLQPLLPQQPVFVVQETDGSVTLDNGIIRVKLDPTGRLTSLVLVASGREAIAEG 720

Query: 721  AVGNQFVLFDDVPLYWDAWDVMDYHLETRKPVLGQAGTLAVGTEGGLRGSAWFLLQISPN 780
            AVGNQFVLFDDVPLYWDAWDVMDYHLETRKPVLGQAGTLAVGTEGGLRGSAWFLLQISPN
Sbjct: 721  AVGNQFVLFDDVPLYWDAWDVMDYHLETRKPVLGQAGTLAVGTEGGLRGSAWFLLQISPN 780

Query: 781  SRLSQEVVLDVGCPYVRFHTEVHWHEAHKFLKVEFPARVRSSQATYEIQFGHLQRPTHYN 840
            SRLSQEVVLDVGCPYVRFHTEVHWHEAHKFLKVEFPARVRSSQATYEIQFGHLQRPTHYN
Sbjct: 781  SRLSQEVVLDVGCPYVRFHTEVHWHEAHKFLKVEFPARVRSSQATYEIQFGHLQRPTHYN 840

Query: 841  TSWDWARFEVWAHRWMDLSEHGFGLALLNDCKYGASVRGSILSLSLLRAPKAPDATADTG 900
            TSWDWARFEVWAHRWMDLSEHGFGLALLNDCKYGASVRGSILSLSLLRAPKAPDATADTG
Sbjct: 841  TSWDWARFEVWAHRWMDLSEHGFGLALLNDCKYGASVRGSILSLSLLRAPKAPDATADTG 900

Query: 901  RHEFTYALMPHKGSFQDAGVIQAAYSLNFPLLALPAPSPAPATSWSAFSVSSPAVVLETV 960
            RHEFTYALMPHKGSFQDAGVIQAAYSLNFPLLALPAPSPAPATSWSAFSVSSPAVVLETV
Sbjct: 901  RHEFTYALMPHKGSFQDAGVIQAAYSLNFPLLALPAPSPAPATSWSAFSVSSPAVVLETV 960

Query: 961  KQAESSPQRRSLVLRLYEAHGSHVDCWLHLSLPVQEAILCDLLERPDPAGHLTLRDNRLK 1020
            KQAESSPQRRSLVLRLYEAHGSHVDCWLHLSLPVQEAILCDLLERPDPAGHLTLRDNRLK
Sbjct: 961  KQAESSPQRRSLVLRLYEAHGSHVDCWLHLSLPVQEAILCDLLERPDPAGHLTLRDNRLK 1020

Query: 1021 LTFSPFQVLSLLLVLQPPPH 1040
            LTFSPFQVLSLLLVLQPPPH
Sbjct: 1021 LTFSPFQVLSLLLVLQPPPH 1040


>gi|51477714 mannosidase, alpha, class 2A, member 1 [Homo sapiens]
          Length = 1144

 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 45/182 (24%), Positives = 72/182 (39%), Gaps = 9/182 (4%)

Query: 258 HCHIDTAWLWPFKETVRKCARSWVTALQL-MERNPEFIFACSQAQQL-EWVKSRYPGLYS 315
           H H D  WL  F +  R   +     + L ++ +    F  S+   L +W          
Sbjct: 173 HSHNDPGWLKTFNDYFRDKTQYIFNNMVLKLKEDSRRKFIWSEISYLSKWWDIIDIQKKD 232

Query: 316 RIQEFACRGQFVPVGGTWVEMDGNLPSGEAMVRQFLQGQNFFLQEFGKMCSEFWLPDTFG 375
            ++     GQ   V G WV  D   P   A++ Q ++G  +     G      W  D FG
Sbjct: 233 AVKSLIENGQLEIVTGGWVMPDEATPHYFALIDQLIEGHQWLENNIGVKPRSGWAIDPFG 292

Query: 376 YSAQLPQIMHGCGIRRFLTQKLSWNLVNSFPHH---TFFW-EGLD-GS--RVLVHFPPGD 428
           +S  +  +++  G+   L Q++ + +   F  H    FFW +  D GS   +L H  P  
Sbjct: 293 HSPTMAYLLNRAGLSHMLIQRVHYAVKKHFALHKTLEFFWRQNWDLGSVTDILCHMMPFY 352

Query: 429 SY 430
           SY
Sbjct: 353 SY 354


>gi|51477716 mannosidase, alpha, class 2A, member 2 [Homo sapiens]
          Length = 1150

 Score = 45.4 bits (106), Expect = 3e-04
 Identities = 41/184 (22%), Positives = 70/184 (38%), Gaps = 13/184 (7%)

Query: 258 HCHIDTAWLWPFK----ETVRKCARSWVTALQLMERNPEFIFACSQAQQLEWVKSRYPGL 313
           H H D  W+  F     E  +    S V+ LQ   R   F++A   +   +W  +     
Sbjct: 173 HSHNDPGWIKTFDKYYTEQTQHILNSMVSKLQEDPRR-RFLWA-EVSFFAKWWDNINVQK 230

Query: 314 YSRIQEFACRGQFVPVGGTWVEMDGNLPSGEAMVRQFLQGQNFFLQEFGKMCSEFWLPDT 373
            + ++     GQ     G WV  D       A++ Q ++G  +  +  G      W  D 
Sbjct: 231 RAAVRRLVGNGQLEIATGGWVMPDEANSHYFALIDQLIEGHQWLERNLGATPRSGWAVDP 290

Query: 374 FGYSAQLPQIMHGCGIRRFLTQKLSWNLVNSF--PHHTFF-----WEGLDGSRVLVHFPP 426
           FGYS+ +P ++    +   L Q++ + +   F   H   F     W+    + +  H  P
Sbjct: 291 FGYSSTMPYLLRRANLTSMLIQRVHYAIKKHFAATHSLEFMWRQTWDSDSSTDIFCHMMP 350

Query: 427 GDSY 430
             SY
Sbjct: 351 FYSY 354


>gi|50659093 mannosidase, alpha, class 2B, member 2 [Homo sapiens]
          Length = 1009

 Score = 43.9 bits (102), Expect = 8e-04
 Identities = 38/167 (22%), Positives = 71/167 (42%), Gaps = 14/167 (8%)

Query: 258 HCHIDTAWLWPFKETVRKCARS-WVTALQLMERNPEFIFACSQAQQLEWVKSRYPGLYSR 316
           H H+D  W++  +E++R  A + + + ++ + R  +  F    A + E+ +  + G+ S 
Sbjct: 34  HSHMDVGWVYTVQESMRAYAANVYTSVVEELARGQQRRFI---AVEQEFFRLWWDGVASD 90

Query: 317 IQEFACRGQFVPVGGTWVEMDGNLPSGEAM------VRQFLQGQNFFLQEFGKMCSEFWL 370
            Q++  R Q +  G     + G +   EA+      + Q  +G  F  + FG      W 
Sbjct: 91  QQKYQVR-QLLEEGRLEFVIGGQVMHDEAVTHLDDQILQLTEGHGFLYETFGIRPQFSWH 149

Query: 371 PDTFGYSAQLPQIMHGCGIRRFLTQKLSWNLVNSFPHH---TFFWEG 414
            D FG SA  P +    G    L  ++ ++L  +        F W G
Sbjct: 150 VDPFGASATTPTLFALAGFNAHLGSRIDYDLKAAMQEARGLQFVWRG 196


>gi|102469037 jun D proto-oncogene [Homo sapiens]
          Length = 347

 Score = 34.7 bits (78), Expect = 0.48
 Identities = 41/158 (25%), Positives = 57/158 (36%), Gaps = 36/158 (22%)

Query: 529 IKKGNRECERILHDVELLSSLALARSAQFLYPAAQLQHLWRLLLLNQFHDVVTGSCIQMV 588
           +K  + E ER++     L +     S+QFLYP                   V  S  Q  
Sbjct: 96  LKLASPELERLIIQSNGLVTTT-PTSSQFLYPK------------------VAASEEQEF 136

Query: 589 AEEAMCHYEDIRSHGNTLLSAAAAALCAGEPGPEGLLIVNTLPWKRIEVMALPK------ 642
           AE  +   ED+         AAAAA  A   GP G    +  P +     A P+      
Sbjct: 137 AEGFVKALEDLHKQNQLGAGAAAAAAAAAAGGPSGTATGSAPPGELAPAAAAPEAPVYAN 196

Query: 643 ----------PGGAHSLALVTVPSMGYAPVPPPTSLQP 670
                      GGA ++A    P + + P PPP +L P
Sbjct: 197 LSSYAGGAGGAGGAATVAFAAEP-VPFPPPPPPGALGP 233


>gi|4506755 retinoid X receptor, alpha [Homo sapiens]
          Length = 462

 Score = 34.7 bits (78), Expect = 0.48
 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 5/67 (7%)

Query: 640 LPKPGGAHSLALVTVPSMGYAPVPPPTSLQPLLPQQPVFVVQETDGSVTLDNGIIRVKLD 699
           +  P G HS+++ T P++G++   P  S     P  PV   ++    + L NG+++V   
Sbjct: 68  ISSPMGPHSMSVPTTPTLGFSTGSPQLS----SPMNPVSSSEDIKPPLGL-NGVLKVPAH 122

Query: 700 PTGRLTS 706
           P+G + S
Sbjct: 123 PSGNMAS 129


>gi|156616271 kinesin family member 19 [Homo sapiens]
          Length = 998

 Score = 34.3 bits (77), Expect = 0.63
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 7/69 (10%)

Query: 452 ANHSAFLFGFGDGGGGPTQTMLDRLKRLSNTDGLPRVQLSSPRQLFSALESDSEQLCTWV 511
           + ++A +F +G  G G T TML        TD  P + + +   LF A+E  S  +   V
Sbjct: 94  SGYNATVFAYGPTGCGKTYTML-------GTDQEPGIYVQTLNDLFRAIEETSNDMEYEV 146

Query: 512 GELFLELHN 520
              +LE++N
Sbjct: 147 SMSYLEIYN 155


>gi|156546910 BRAF35/HDAC2 complex isoform b [Homo sapiens]
          Length = 634

 Score = 30.8 bits (68), Expect = 6.9
 Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 20/85 (23%)

Query: 641 PKPGGAHSLALVTVPSMGYAPVPPPTSLQPLLPQQPVFVVQETDGSV-TLDNGI--IRV- 696
           PKP   +++ +        AP PPP    P L Q+PV + + T  ++ T  N I  +RV 
Sbjct: 237 PKPVAQNNIPI--------APAPPPMLAAPQLIQRPVMLTKFTPTTLPTSQNSIHPVRVV 288

Query: 697 --------KLDPTGRLTSLVLVASG 713
                   K  P  +LTS+V+   G
Sbjct: 289 NGQTATIAKTFPMAQLTSIVIATPG 313


>gi|156546894 BRAF35/HDAC2 complex isoform a [Homo sapiens]
          Length = 680

 Score = 30.8 bits (68), Expect = 6.9
 Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 20/85 (23%)

Query: 641 PKPGGAHSLALVTVPSMGYAPVPPPTSLQPLLPQQPVFVVQETDGSV-TLDNGI--IRV- 696
           PKP   +++ +        AP PPP    P L Q+PV + + T  ++ T  N I  +RV 
Sbjct: 236 PKPVAQNNIPI--------APAPPPMLAAPQLIQRPVMLTKFTPTTLPTSQNSIHPVRVV 287

Query: 697 --------KLDPTGRLTSLVLVASG 713
                   K  P  +LTS+V+   G
Sbjct: 288 NGQTATIAKTFPMAQLTSIVIATPG 312


>gi|154759423 Cdk5 and Abl enzyme substrate 1 isoform 2 [Homo
           sapiens]
          Length = 633

 Score = 30.8 bits (68), Expect = 6.9
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 9/63 (14%)

Query: 616 AGEPGPEGLLIVNTLPWKRIEVMALPKPGGAHSLALVTVPSMGYAP-----VPPPTSLQP 670
           A +PG  G     T    R  ++A  + GG  +LA    P+ G A      +P P+SL P
Sbjct: 93  AAKPGAGGACGART----RFSLLAAAERGGCIALAAPGTPAAGLAAGSGPCLPQPSSLPP 148

Query: 671 LLP 673
           L+P
Sbjct: 149 LIP 151


>gi|42475941 zinc finger protein 261 [Homo sapiens]
          Length = 1370

 Score = 30.8 bits (68), Expect = 6.9
 Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 5/58 (8%)

Query: 620 GPEGLLIVNTLPWKRIEVMALPKPGGAHSLALVTVPSMGYAPVPPPTSLQPLLPQQPV 677
           GPEG     TL W   +    P PGG     +   P  G     P   L+PL P  P+
Sbjct: 98  GPEG-----TLAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPI 150


>gi|4827067 zinc finger protein 261 [Homo sapiens]
          Length = 1370

 Score = 30.8 bits (68), Expect = 6.9
 Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 5/58 (8%)

Query: 620 GPEGLLIVNTLPWKRIEVMALPKPGGAHSLALVTVPSMGYAPVPPPTSLQPLLPQQPV 677
           GPEG     TL W   +    P PGG     +   P  G     P   L+PL P  P+
Sbjct: 98  GPEG-----TLAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPI 150


>gi|4758844 nucleoporin 155kDa isoform 2 [Homo sapiens]
          Length = 1332

 Score = 30.8 bits (68), Expect = 6.9
 Identities = 19/81 (23%), Positives = 38/81 (46%)

Query: 534 RECERILHDVELLSSLALARSAQFLYPAAQLQHLWRLLLLNQFHDVVTGSCIQMVAEEAM 593
           +E +R  H+ +L   ++L    Q +  + Q   LW+LL  +QF  +V     ++  +  +
Sbjct: 702 QELQRKFHEAQLSEKISLQAIQQLVRKSYQALALWKLLCEHQFTIIVAELQKELQEQLKI 761

Query: 594 CHYEDIRSHGNTLLSAAAAAL 614
             ++D+      L  A  A+L
Sbjct: 762 TTFKDLVIRDKELTGALIASL 782


>gi|24430149 nucleoporin 155kDa isoform 1 [Homo sapiens]
          Length = 1391

 Score = 30.8 bits (68), Expect = 6.9
 Identities = 19/81 (23%), Positives = 38/81 (46%)

Query: 534 RECERILHDVELLSSLALARSAQFLYPAAQLQHLWRLLLLNQFHDVVTGSCIQMVAEEAM 593
           +E +R  H+ +L   ++L    Q +  + Q   LW+LL  +QF  +V     ++  +  +
Sbjct: 761 QELQRKFHEAQLSEKISLQAIQQLVRKSYQALALWKLLCEHQFTIIVAELQKELQEQLKI 820

Query: 594 CHYEDIRSHGNTLLSAAAAAL 614
             ++D+      L  A  A+L
Sbjct: 821 TTFKDLVIRDKELTGALIASL 841


>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform A [Homo sapiens]
          Length = 1679

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 618 EPGPEGLLIVNTLPWKRIEVMALPKPGGAHSLALVTVPSMGYAPVPPPTSLQPLLPQQPV 677
           +P PEG +     P    + +  P+P G  S A   VP     PV PP +  P  P QP 
Sbjct: 282 KPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAAS-PVMPPQTQSPGQPAQPA 340

Query: 678 FVV 680
            +V
Sbjct: 341 PMV 343


>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform F [Homo sapiens]
          Length = 1613

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 618 EPGPEGLLIVNTLPWKRIEVMALPKPGGAHSLALVTVPSMGYAPVPPPTSLQPLLPQQPV 677
           +P PEG +     P    + +  P+P G  S A   VP     PV PP +  P  P QP 
Sbjct: 282 KPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAAS-PVMPPQTQSPGQPAQPA 340

Query: 678 FVV 680
            +V
Sbjct: 341 PMV 343


>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform E [Homo sapiens]
          Length = 1614

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 618 EPGPEGLLIVNTLPWKRIEVMALPKPGGAHSLALVTVPSMGYAPVPPPTSLQPLLPQQPV 677
           +P PEG +     P    + +  P+P G  S A   VP     PV PP +  P  P QP 
Sbjct: 282 KPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAAS-PVMPPQTQSPGQPAQPA 340

Query: 678 FVV 680
            +V
Sbjct: 341 PMV 343


>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform D [Homo sapiens]
          Length = 1616

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 618 EPGPEGLLIVNTLPWKRIEVMALPKPGGAHSLALVTVPSMGYAPVPPPTSLQPLLPQQPV 677
           +P PEG +     P    + +  P+P G  S A   VP     PV PP +  P  P QP 
Sbjct: 282 KPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAAS-PVMPPQTQSPGQPAQPA 340

Query: 678 FVV 680
            +V
Sbjct: 341 PMV 343


>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform C [Homo sapiens]
          Length = 1617

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 618 EPGPEGLLIVNTLPWKRIEVMALPKPGGAHSLALVTVPSMGYAPVPPPTSLQPLLPQQPV 677
           +P PEG +     P    + +  P+P G  S A   VP     PV PP +  P  P QP 
Sbjct: 282 KPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAAS-PVMPPQTQSPGQPAQPA 340

Query: 678 FVV 680
            +V
Sbjct: 341 PMV 343


>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform B [Homo sapiens]
          Length = 1647

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 618 EPGPEGLLIVNTLPWKRIEVMALPKPGGAHSLALVTVPSMGYAPVPPPTSLQPLLPQQPV 677
           +P PEG +     P    + +  P+P G  S A   VP     PV PP +  P  P QP 
Sbjct: 282 KPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAAS-PVMPPQTQSPGQPAQPA 340

Query: 678 FVV 680
            +V
Sbjct: 341 PMV 343


>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform B [Homo sapiens]
          Length = 1647

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 618 EPGPEGLLIVNTLPWKRIEVMALPKPGGAHSLALVTVPSMGYAPVPPPTSLQPLLPQQPV 677
           +P PEG +     P    + +  P+P G  S A   VP     PV PP +  P  P QP 
Sbjct: 282 KPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAAS-PVMPPQTQSPGQPAQPA 340

Query: 678 FVV 680
            +V
Sbjct: 341 PMV 343


>gi|239755911 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 667

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 5/46 (10%)

Query: 72  SFGPTWWTCWF----RVELTIPEAWVGQEVHLCWESDGEGLVWRDG 113
           S  PTW+  W      +E+ + EA  G ++HL W   G+ L   DG
Sbjct: 55  SISPTWYMVWAWGGEELEVDVGEA-AGAQLHLQWAEHGQQLQGDDG 99


>gi|239750425 PREDICTED: hypothetical protein XP_002347391 [Homo
           sapiens]
          Length = 341

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 5/46 (10%)

Query: 72  SFGPTWWTCWF----RVELTIPEAWVGQEVHLCWESDGEGLVWRDG 113
           S  PTW+  W      +E+ + EA  G ++HL W   G+ L   DG
Sbjct: 55  SISPTWYMVWAWGGEELEVDVGEA-AGAQLHLQWAEHGQQLQGDDG 99


>gi|239744727 PREDICTED: hypothetical protein XP_002343254 [Homo
           sapiens]
          Length = 567

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 5/46 (10%)

Query: 72  SFGPTWWTCWF----RVELTIPEAWVGQEVHLCWESDGEGLVWRDG 113
           S  PTW+  W      +E+ + EA  G ++HL W   G+ L   DG
Sbjct: 55  SISPTWYMVWAWGGEELEVDVGEA-AGAQLHLQWAEHGQQLQGDDG 99


>gi|156564405 catalytic phosphatidylinositol 3-kinase delta [Homo
           sapiens]
          Length = 1044

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 10/92 (10%)

Query: 281 VTALQLMERNPEFIFACSQAQQLEWVKSRYPG--LYSRIQEF--ACRGQFVPVGGTWVEM 336
           +  +QL + N     A ++   L W+KS+ PG  L   I+EF  +C G  V    T+V  
Sbjct: 834 IANIQLNKSNMAATAAFNKDALLNWLKSKNPGEALDRAIEEFTLSCAGYCV---ATYVLG 890

Query: 337 DGNLPSGEAMVRQFLQGQNFFLQEFGKMCSEF 368
            G+  S   M+R+   GQ F + +FG     F
Sbjct: 891 IGDRHSDNIMIRE--SGQLFHI-DFGHFLGNF 919


>gi|126507091 LATS, large tumor suppressor, homolog 2 [Homo sapiens]
          Length = 1088

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 38/146 (26%), Positives = 55/146 (37%), Gaps = 15/146 (10%)

Query: 877  VRGSILSLSLLRAPKAPDATA-DTGRHEFTYALMPHKGSFQDAGVIQAAYSLNFPLLALP 935
            V G  L   + R+P     T  +TG     YA +P KG     G   A  +   P   L 
Sbjct: 260  VPGEPLGYGVQRSPSFQSKTPPETGG----YASLPTKGQGGPPG---AGLAFPPPAAGLY 312

Query: 936  APSP------APATSWSAFSVSSPAVVLETVKQAESSPQRRSLVLRLYEAHGSHVDCWLH 989
             P P        A         S     ++  Q+  +P R SL + LYE   + V  W  
Sbjct: 313  VPHPHHKQAGPAAHQLHVLGSRSQVFASDSPPQSLLTPSRNSLNVDLYELGSTSVQQWPA 372

Query: 990  LSLPVQEAILCDLLERPDPAGHLTLR 1015
             +L  ++++    LE P P  H+  R
Sbjct: 373  ATLARRDSLQKPGLEAP-PRAHVAFR 397


>gi|210032580 SET domain containing 1B [Homo sapiens]
          Length = 1923

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 2/51 (3%)

Query: 641 PKPGGAHSLALVTVPSMGYAP-VPPPTSLQPLLPQQP-VFVVQETDGSVTL 689
           P P  AH    V  P +   P VPPP  L PL P  P +F V + D S  L
Sbjct: 714 PPPPPAHPAVTVPPPPLPAPPGVPPPPILPPLPPFPPGLFPVMQVDMSHVL 764


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.136    0.435 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,211,016
Number of Sequences: 37866
Number of extensions: 2164736
Number of successful extensions: 5724
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 5694
Number of HSP's gapped (non-prelim): 46
length of query: 1040
length of database: 18,247,518
effective HSP length: 112
effective length of query: 928
effective length of database: 14,006,526
effective search space: 12998056128
effective search space used: 12998056128
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.