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Search of human proteins with 46409468
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|46409468 hypothetical protein LOC392490 [Homo sapiens]
(140 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|46409468 hypothetical protein LOC392490 [Homo sapiens] 282 7e-77
gi|4507669 tumor protein, translationally-controlled 1 [Homo sap... 232 9e-62
gi|169178083 PREDICTED: similar to tumor protein, translationall... 176 4e-45
gi|169179309 PREDICTED: similar to tumor protein, translationall... 176 4e-45
gi|169181065 PREDICTED: similar to tumor protein, translationall... 174 2e-44
gi|117414135 apoptosis inhibitor [Homo sapiens] 135 1e-32
gi|239757896 PREDICTED: similar to hCG1793821 [Homo sapiens] 108 1e-24
gi|239752409 PREDICTED: similar to hCG1793821 [Homo sapiens] 108 1e-24
gi|239746926 PREDICTED: similar to hCG1793821 [Homo sapiens] 106 5e-24
gi|48762942 huntingtin interacting protein-1-related [Homo sapiens] 32 0.22
gi|239750456 PREDICTED: similar to KIAA0655 protein [Homo sapiens] 32 0.22
gi|41352705 kinesin family member 3C [Homo sapiens] 29 1.4
gi|75677576 dyslexia susceptibility 1 candidate 1 isoform c [Hom... 28 1.9
gi|75677567 dyslexia susceptibility 1 candidate 1 isoform b [Hom... 28 1.9
gi|75677570 dyslexia susceptibility 1 candidate 1 isoform a [Hom... 28 1.9
gi|21237725 phosphoinositide-3-kinase, catalytic, gamma polypept... 28 3.2
gi|8923559 3-oxoacyl-ACP synthase, mitochondrial isoform 1 precu... 26 9.3
gi|21071077 dishevelled-associated activator of morphogenesis 1 ... 26 9.3
gi|13376460 zinc finger protein 556 [Homo sapiens] 26 9.3
>gi|46409468 hypothetical protein LOC392490 [Homo sapiens]
Length = 140
Score = 282 bits (721), Expect = 7e-77
Identities = 140/140 (100%), Positives = 140/140 (100%)
Query: 1 METVIMITYWDLISHSEMFSDSYMSQEIADGLRLEVEGKIVSRTEGNIFDSLIGGNASAE 60
METVIMITYWDLISHSEMFSDSYMSQEIADGLRLEVEGKIVSRTEGNIFDSLIGGNASAE
Sbjct: 1 METVIMITYWDLISHSEMFSDSYMSQEIADGLRLEVEGKIVSRTEGNIFDSLIGGNASAE 60
Query: 61 GPEGKGTESTVITGVDSVMNHHLQETSFTKEAYNKCIKDYMKSIKGKLEEQRPKRVKPFM 120
GPEGKGTESTVITGVDSVMNHHLQETSFTKEAYNKCIKDYMKSIKGKLEEQRPKRVKPFM
Sbjct: 61 GPEGKGTESTVITGVDSVMNHHLQETSFTKEAYNKCIKDYMKSIKGKLEEQRPKRVKPFM 120
Query: 121 TGAAEQIKHILANFKNYQKT 140
TGAAEQIKHILANFKNYQKT
Sbjct: 121 TGAAEQIKHILANFKNYQKT 140
>gi|4507669 tumor protein, translationally-controlled 1 [Homo
sapiens]
Length = 172
Score = 232 bits (591), Expect = 9e-62
Identities = 118/133 (88%), Positives = 122/133 (91%)
Query: 6 MITYWDLISHSEMFSDSYMSQEIADGLRLEVEGKIVSRTEGNIFDSLIGGNASAEGPEGK 65
MI Y DLISH EMFSD Y +EIADGL LEVEGK+VSRTEGNI DSLIGGNASAEGPEG+
Sbjct: 1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60
Query: 66 GTESTVITGVDSVMNHHLQETSFTKEAYNKCIKDYMKSIKGKLEEQRPKRVKPFMTGAAE 125
GTESTVITGVD VMNHHLQETSFTKEAY K IKDYMKSIKGKLEEQRP+RVKPFMTGAAE
Sbjct: 61 GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120
Query: 126 QIKHILANFKNYQ 138
QIKHILANFKNYQ
Sbjct: 121 QIKHILANFKNYQ 133
>gi|169178083 PREDICTED: similar to tumor protein,
translationally-controlled 1 [Homo sapiens]
Length = 138
Score = 176 bits (447), Expect = 4e-45
Identities = 88/99 (88%), Positives = 92/99 (92%)
Query: 40 IVSRTEGNIFDSLIGGNASAEGPEGKGTESTVITGVDSVMNHHLQETSFTKEAYNKCIKD 99
+VSRTEGNI DSLIGGN SAEGPEG+GTESTVIT VD VMNHHLQETSFTKEA+ K IKD
Sbjct: 1 MVSRTEGNIDDSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKD 60
Query: 100 YMKSIKGKLEEQRPKRVKPFMTGAAEQIKHILANFKNYQ 138
YMKSIKGKLEE RP+RVKPFMTGAAEQIKHILANFKNYQ
Sbjct: 61 YMKSIKGKLEELRPERVKPFMTGAAEQIKHILANFKNYQ 99
>gi|169179309 PREDICTED: similar to tumor protein,
translationally-controlled 1 [Homo sapiens]
Length = 138
Score = 176 bits (447), Expect = 4e-45
Identities = 88/99 (88%), Positives = 92/99 (92%)
Query: 40 IVSRTEGNIFDSLIGGNASAEGPEGKGTESTVITGVDSVMNHHLQETSFTKEAYNKCIKD 99
+VSRTEGNI DSLIGGN SAEGPEG+GTESTVIT VD VMNHHLQETSFTKEA+ K IKD
Sbjct: 1 MVSRTEGNIDDSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKD 60
Query: 100 YMKSIKGKLEEQRPKRVKPFMTGAAEQIKHILANFKNYQ 138
YMKSIKGKLEE RP+RVKPFMTGAAEQIKHILANFKNYQ
Sbjct: 61 YMKSIKGKLEELRPERVKPFMTGAAEQIKHILANFKNYQ 99
>gi|169181065 PREDICTED: similar to tumor protein,
translationally-controlled 1 [Homo sapiens]
Length = 138
Score = 174 bits (442), Expect = 2e-44
Identities = 87/98 (88%), Positives = 91/98 (92%)
Query: 40 IVSRTEGNIFDSLIGGNASAEGPEGKGTESTVITGVDSVMNHHLQETSFTKEAYNKCIKD 99
+VSRTEGNI DSLIGGN SAEGPEG+GTESTVIT VD VMNHHLQETSFTKEA+ K IKD
Sbjct: 1 MVSRTEGNIDDSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKD 60
Query: 100 YMKSIKGKLEEQRPKRVKPFMTGAAEQIKHILANFKNY 137
YMKSIKGKLEE RP+RVKPFMTGAAEQIKHILANFKNY
Sbjct: 61 YMKSIKGKLEELRPERVKPFMTGAAEQIKHILANFKNY 98
>gi|117414135 apoptosis inhibitor [Homo sapiens]
Length = 127
Score = 135 bits (339), Expect = 1e-32
Identities = 73/118 (61%), Positives = 85/118 (72%)
Query: 18 MFSDSYMSQEIADGLRLEVEGKIVSRTEGNIFDSLIGGNASAEGPEGKGTESTVITGVDS 77
MFSD Y EI +GL LEVE K++S+T GN DSLIG N+S+E E + TEST+IT VD
Sbjct: 1 MFSDIYKIWEITNGLCLEVEQKMLSKTTGNTDDSLIGRNSSSESTEDEVTESTIITSVDI 60
Query: 78 VMNHHLQETSFTKEAYNKCIKDYMKSIKGKLEEQRPKRVKPFMTGAAEQIKHILANFK 135
V NHHLQE+ FTKEAY K IKDYMKSI KLEEQRP+RVK F+TG + L FK
Sbjct: 61 VTNHHLQESIFTKEAYKKYIKDYMKSINEKLEEQRPERVKLFITGMKNKSSTSLLIFK 118
>gi|239757896 PREDICTED: similar to hCG1793821 [Homo sapiens]
Length = 131
Score = 108 bits (270), Expect = 1e-24
Identities = 63/91 (69%), Positives = 70/91 (76%), Gaps = 5/91 (5%)
Query: 6 MITYWDLISHSEMFSDSYMSQEIADGLRLEVEGKIVSRTEGNIFDSLIGGNASAEGPEGK 65
MI Y DLISHSE+ Y +QEI G LEVEGKIVSRTE NI SLIG NAS E PEG+
Sbjct: 1 MIIYPDLISHSEI----YKNQEITKGPCLEVEGKIVSRTEDNIDGSLIGRNASTEVPEGE 56
Query: 66 GTESTVITGVDSVMNHHLQETSFTKEAYNKC 96
T+STVITGVD VM++HLQETSFTKEA + C
Sbjct: 57 ETQSTVITGVD-VMHYHLQETSFTKEASHPC 86
>gi|239752409 PREDICTED: similar to hCG1793821 [Homo sapiens]
Length = 131
Score = 108 bits (270), Expect = 1e-24
Identities = 63/91 (69%), Positives = 70/91 (76%), Gaps = 5/91 (5%)
Query: 6 MITYWDLISHSEMFSDSYMSQEIADGLRLEVEGKIVSRTEGNIFDSLIGGNASAEGPEGK 65
MI Y DLISHSE+ Y +QEI G LEVEGKIVSRTE NI SLIG NAS E PEG+
Sbjct: 1 MIIYPDLISHSEI----YKNQEITKGPCLEVEGKIVSRTEDNIDGSLIGRNASTEVPEGE 56
Query: 66 GTESTVITGVDSVMNHHLQETSFTKEAYNKC 96
T+STVITGVD VM++HLQETSFTKEA + C
Sbjct: 57 ETQSTVITGVD-VMHYHLQETSFTKEASHPC 86
>gi|239746926 PREDICTED: similar to hCG1793821 [Homo sapiens]
Length = 131
Score = 106 bits (265), Expect = 5e-24
Identities = 62/91 (68%), Positives = 69/91 (75%), Gaps = 5/91 (5%)
Query: 6 MITYWDLISHSEMFSDSYMSQEIADGLRLEVEGKIVSRTEGNIFDSLIGGNASAEGPEGK 65
MI Y DLISHSE+ Y +QEI G LEVEGKIVSRTE N SLIG NAS E PEG+
Sbjct: 1 MIIYPDLISHSEI----YKNQEITKGPCLEVEGKIVSRTEDNTDGSLIGRNASTEVPEGE 56
Query: 66 GTESTVITGVDSVMNHHLQETSFTKEAYNKC 96
T+STVITGVD VM++HLQETSFTKEA + C
Sbjct: 57 ETQSTVITGVD-VMHYHLQETSFTKEASHPC 86
>gi|48762942 huntingtin interacting protein-1-related [Homo sapiens]
Length = 1068
Score = 31.6 bits (70), Expect = 0.22
Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 78 VMNHHLQETSFTKEAYNKCIKDYMKSIKGKLEEQRPKRVKPFMTGAAEQIKHILANFKNY 137
++ L++ + Y +K + +++G+LEEQR ++ K + EQ++H LA +
Sbjct: 365 MLRSELEKIKLEAQRYIAQLKSQVNALEGELEEQRKQKQKALVDN--EQLRHELAQLRAA 422
Query: 138 Q 138
Q
Sbjct: 423 Q 423
>gi|239750456 PREDICTED: similar to KIAA0655 protein [Homo sapiens]
Length = 1048
Score = 31.6 bits (70), Expect = 0.22
Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 78 VMNHHLQETSFTKEAYNKCIKDYMKSIKGKLEEQRPKRVKPFMTGAAEQIKHILANFKNY 137
++ L++ + Y +K + +++G+LEEQR ++ K + EQ++H LA +
Sbjct: 345 MLRSELEKIKLEAQRYIAQLKSQVNALEGELEEQRKQKQKALVDN--EQLRHELAQLRAA 402
Query: 138 Q 138
Q
Sbjct: 403 Q 403
>gi|41352705 kinesin family member 3C [Homo sapiens]
Length = 793
Score = 28.9 bits (63), Expect = 1.4
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 62 PEGKGTESTVITGVDSVMNHHLQETSFTKEAYNKCIKDYMKSIKGKLEEQR 112
PEG E+ V D N+H + A K +++Y++ K +LEE++
Sbjct: 422 PEGPVIEAWVAEEEDDNNNNHRPPQPILESALEKNMENYLQEQKERLEEEK 472
>gi|75677576 dyslexia susceptibility 1 candidate 1 isoform c [Homo
sapiens]
Length = 381
Score = 28.5 bits (62), Expect = 1.9
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 12/84 (14%)
Query: 68 ESTVITGVDSVMNHHLQETSF------------TKEAYNKCIKDYMKSIKGKLEEQRPKR 115
E+ +TGVD M ++E S K A + + Y S+ K+EE+ K+
Sbjct: 84 ETLSVTGVDKEMMQRIREKSILQAQERAKEATEAKAAAKREDQKYALSVMMKIEEEERKK 143
Query: 116 VKPFMTGAAEQIKHILANFKNYQK 139
++ + L +K YQ+
Sbjct: 144 IEDMKENERIKATKALEAWKEYQR 167
>gi|75677567 dyslexia susceptibility 1 candidate 1 isoform b [Homo
sapiens]
Length = 376
Score = 28.5 bits (62), Expect = 1.9
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 12/84 (14%)
Query: 68 ESTVITGVDSVMNHHLQETSF------------TKEAYNKCIKDYMKSIKGKLEEQRPKR 115
E+ +TGVD M ++E S K A + + Y S+ K+EE+ K+
Sbjct: 84 ETLSVTGVDKEMMQRIREKSILQAQERAKEATEAKAAAKREDQKYALSVMMKIEEEERKK 143
Query: 116 VKPFMTGAAEQIKHILANFKNYQK 139
++ + L +K YQ+
Sbjct: 144 IEDMKENERIKATKALEAWKEYQR 167
>gi|75677570 dyslexia susceptibility 1 candidate 1 isoform a [Homo
sapiens]
Length = 420
Score = 28.5 bits (62), Expect = 1.9
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 12/84 (14%)
Query: 68 ESTVITGVDSVMNHHLQETSF------------TKEAYNKCIKDYMKSIKGKLEEQRPKR 115
E+ +TGVD M ++E S K A + + Y S+ K+EE+ K+
Sbjct: 84 ETLSVTGVDKEMMQRIREKSILQAQERAKEATEAKAAAKREDQKYALSVMMKIEEEERKK 143
Query: 116 VKPFMTGAAEQIKHILANFKNYQK 139
++ + L +K YQ+
Sbjct: 144 IEDMKENERIKATKALEAWKEYQR 167
>gi|21237725 phosphoinositide-3-kinase, catalytic, gamma polypeptide
[Homo sapiens]
Length = 1102
Score = 27.7 bits (60), Expect = 3.2
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 10/72 (13%)
Query: 76 DSVMNHHLQETSFTKEAYNKCIKDYMKSIKG--------KLEEQRPKRVKPFMTGAAEQI 127
D V+NH L+E S T+E + ++ ++ S G + ++ + TG I
Sbjct: 904 DEVLNHWLKEKSPTEEKFQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMITETGNLFHI 963
Query: 128 K--HILANFKNY 137
HIL N+K++
Sbjct: 964 DFGHILGNYKSF 975
>gi|8923559 3-oxoacyl-ACP synthase, mitochondrial isoform 1
precursor [Homo sapiens]
Length = 459
Score = 26.2 bits (56), Expect = 9.3
Identities = 31/124 (25%), Positives = 45/124 (36%), Gaps = 17/124 (13%)
Query: 21 DSYMSQEIADGLRLEVEGKIVSRTEGNIFDSLIG-------GNASAEGPEGKGTESTVIT 73
D ++ E A L LE V R I+ ++G G+ +A PEG+G +
Sbjct: 272 DGFVMGEGAAVLVLEEYEHAVQR-RARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAA 330
Query: 74 GVD---------SVMNHHLQETSFTKEAYNKCIKDYMKSIKGKLEEQRPKRVKPFMTGAA 124
+ S +N H T A NK IK K L K + GAA
Sbjct: 331 ALKDAGVQPEEISYINAHATSTPLGDAAENKAIKHLFKDHAYALAVSSTKGATGHLLGAA 390
Query: 125 EQIK 128
++
Sbjct: 391 GAVE 394
>gi|21071077 dishevelled-associated activator of morphogenesis 1
[Homo sapiens]
Length = 1078
Score = 26.2 bits (56), Expect = 9.3
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 77 SVMNHHLQETSFTKEAYNKCIKDYMKSIKGKLEEQRPKRVKPFMTGAAEQIKHILANFKN 136
S +NH+ Q + K + + +K K+E R + F +GA +Q+ ++ F N
Sbjct: 765 SRINHYQQRLQSLY--FKKKFAERVAEVKPKVEAIRSGSEEVFRSGALKQLLEVVLAFGN 822
Query: 137 Y 137
Y
Sbjct: 823 Y 823
>gi|13376460 zinc finger protein 556 [Homo sapiens]
Length = 456
Score = 26.2 bits (56), Expect = 9.3
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 14 SHSEMFSDSYMSQEIADGLRLEVEGKIVSRTEGNIFDSLIGGN 56
+ +++ + +SQ+ G +L ++ KI T NI+ SL+G N
Sbjct: 45 NEAQLKASGSISQQDTSGEKLSLKQKIEKFTRKNIWASLLGKN 87
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.130 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,658,538
Number of Sequences: 37866
Number of extensions: 175669
Number of successful extensions: 449
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 431
Number of HSP's gapped (non-prelim): 19
length of query: 140
length of database: 18,247,518
effective HSP length: 92
effective length of query: 48
effective length of database: 14,763,846
effective search space: 708664608
effective search space used: 708664608
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.