Guide to the Human Genome
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Name: OXSM Sequence: fasta or formatted (459aa) NCBI GI: 8923559
Description:

3-oxoacyl-ACP synthase, mitochondrial isoform 1 precursor

Referenced in:

Fatty Acid Synthesis

Other entries for this name:
alt prot [376aa] 3-oxoacyl-ACP synthase, mitochondrial isoform 2 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.5         53           3
 C cysteine            2.4         11           1
 D aspartate           3.9         18           1
 E glutamate           5.2         24           2
 F phenylalanine       4.1         19           2
 G glycine             9.8         45           2
 H histidine           2.8         13           1
 I isoleucine          5.0         23           1
 K lysine              5.0         23           1
 L leucine             8.9         41           2
 M methionine          2.2         10           1
 N asparagine          3.3         15           1
 P proline             4.8         22           2
 Q glutamine           2.8         13           2
 R arginine            4.4         20           2
 S serine              7.6         35           2
 T threonine           5.9         27           2
 V valine              7.0         32           2
 W tryptophan          0.7          3           1
 Y tyrosine            2.6         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   3-oxoacyl-ACP synthase, mitochondrial isoform 1 precu... 
OXSM                  0.482   3-oxoacyl-ACP synthase, mitochondrial isoform 2 pre...
FASN                  0.092   fatty acid synthase 
ACAT1                 0.011   acetyl-Coenzyme A acetyltransferase 1 precursor [Homo...
ACAA2                 0.011   acetyl-coenzyme A acyltransferase 2 
HADHB                 0.010   mitochondrial trifunctional protein, beta subunit pre...
ODZ4                  0.008   odz, odd Oz/ten-m homolog 4 
USH2A                 0.007   usherin isoform B 
MLL2                  0.006   myeloid/lymphoid or mixed-lineage leukemia 2 
COLEC11               0.006   collectin sub-family member 11 isoform b 
COLEC11               0.006   collectin sub-family member 11 isoform a 
PPARGC1B              0.004   peroxisome proliferator-activated receptor gamma, co...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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