Guide to the Human Genome
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Name: FTCD Sequence: fasta or formatted (541aa) NCBI GI: 46255035
Description:

formiminotransferase cyclodeaminase

Referenced in:

Amino Acid Catabolism

Other entries for this name:
alt mRNA [541aa] formiminotransferase cyclodeaminase
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.2         66           6
 C cysteine            2.2         12           1
 D aspartate           4.4         24           1
 E glutamate           7.9         43           3
 F phenylalanine       3.5         19           1
 G glycine             7.4         40           3
 H histidine           1.1          6           2
 I isoleucine          3.3         18           2
 K lysine              3.5         19           2
 L leucine            12.0         65           2
 M methionine          1.8         10           1
 N asparagine          2.6         14           1
 P proline             5.2         28           2
 Q glutamine           4.6         25           2
 R arginine            7.4         40           2
 S serine              5.4         29           2
 T threonine           4.8         26           2
 V valine              7.8         42           2
 W tryptophan          0.7          4           1
 Y tyrosine            2.0         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   formiminotransferase cyclodeaminase 
FTCD                  1.000   formiminotransferase cyclodeaminase 
SAGE1                 0.007   sarcoma antigen 1 
NOVA2                 0.006   neuro-oncological ventral antigen 2 
NAT12                 0.006   N-acetyltransferase 12 
AGAP2                 0.005   centaurin, gamma 1 isoform PIKE-L 
LOC644717             0.005   PREDICTED: SAGE1-like protein-like 
LOC100293985          0.005   PREDICTED: hypothetical protein 
LOC644717             0.005   PREDICTED: SAGE1-like protein-like 
LOC100289986          0.005   PREDICTED: hypothetical protein XP_002346657 
LOC644717             0.005   PREDICTED: SAGE1-like protein-like 
LOC100288009          0.005   PREDICTED: hypothetical protein XP_002342502 
AQP12A                0.005   aquaporin 12A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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