Guide to the Human Genome
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Name: SLC25A43 Sequence: fasta or formatted (341aa) NCBI GI: 21687151
Description:

mitochondrial solute carrier protein

Referenced in:

Mitochondria
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         29           3
 C cysteine            2.1          7           1
 D aspartate           2.3          8           2
 E glutamate           2.6          9           1
 F phenylalanine       5.3         18           2
 G glycine             8.5         29           2
 H histidine           1.8          6           1
 I isoleucine          3.8         13           1
 K lysine              5.0         17           2
 L leucine            14.1         48           2
 M methionine          2.1          7           1
 N asparagine          2.6          9           1
 P proline             5.0         17           1
 Q glutamine           5.3         18           2
 R arginine            5.9         20           2
 S serine              6.5         22           2
 T threonine           6.2         21           1
 V valine              7.3         25           2
 W tryptophan          2.1          7           1
 Y tyrosine            3.2         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial solute carrier protein 
SLC25A16              0.173   solute carrier family 25, member 16 
SLC25A24              0.154   solute carrier family 25 member 24 isoform 1 
SLC25A24              0.154   solute carrier family 25 member 24 isoform 2 
SLC25A42              0.152   solute carrier family 25, member 42 
LOC100292202          0.151   PREDICTED: similar to solute carrier family 25, mem...
LOC100292202          0.151   PREDICTED: similar to solute carrier family 25, mem...
SLC25A25              0.151   solute carrier family 25, member 25 isoform c 
SLC25A25              0.151   solute carrier family 25, member 25 isoform a 
SLC25A25              0.151   solute carrier family 25, member 25 isoform d 
SLC25A25              0.151   solute carrier family 25, member 25 isoform b 
SLC25A23              0.143   solute carrier family 25, member 23 
SLC25A41              0.140   solute carrier family 25, member 41 
SLC25A19              0.121   solute carrier family 25, member 19 
SLC25A19              0.121   solute carrier family 25, member 19 
SLC25A19              0.121   solute carrier family 25, member 19 
SLC25A4               0.119   solute carrier family 25 (mitochondrial carrier; ade...
SLC25A6               0.119   solute carrier family 25, member A6 
SLC25A5               0.116   solute carrier family 25, member 5 
SLC25A31              0.116   solute carrier family 25 (mitochondrial carrier; ade...
SLC25A40              0.107   mitochondrial carrier family protein 
SLC25A39              0.100   solute carrier family 25, member 39 isoform b 
SLC25A39              0.100   solute carrier family 25, member 39 isoform a [Homo...
SLC25A30              0.098   solute carrier family 25, member 30 
SLC25A29              0.097   solute carrier family 25, member 29 
UCP2                  0.094   uncoupling protein 2 
SLC25A14              0.092   solute carrier family 25, member 14 isoform UCP5L [Ho...
SLC25A14              0.092   solute carrier family 25, member 14 isoform UCP5S [H...
SLC25A27              0.092   solute carrier family 25, member 27 
SLC25A18              0.092   solute carrier 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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