Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 4557809
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4557809 ornithine aminotransferase precursor [Homo sapiens]
(439 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4557809 ornithine aminotransferase precursor [Homo sapiens] 887 0.0
gi|24119277 alanine-glyoxylate aminotransferase 2-like 2 [Homo s... 129 7e-30
gi|37574042 alanine-glyoxylate aminotransferase 2-like 1 isoform... 127 2e-29
gi|226442709 alanine-glyoxylate aminotransferase 2-like 1 isofor... 114 2e-25
gi|226442705 alanine-glyoxylate aminotransferase 2-like 1 isofor... 110 3e-24
gi|13994255 alanine-glyoxylate aminotransferase 2 precursor [Hom... 105 1e-22
gi|188536080 4-aminobutyrate aminotransferase precursor [Homo sa... 69 8e-12
gi|38679950 4-aminobutyrate aminotransferase precursor [Homo sap... 69 8e-12
gi|38679946 4-aminobutyrate aminotransferase precursor [Homo sap... 69 8e-12
gi|13375727 acyl-CoA synthetase short-chain family member 3 [Hom... 33 0.67
gi|91598777 transmembrane protein 146 [Homo sapiens] 29 7.4
>gi|4557809 ornithine aminotransferase precursor [Homo sapiens]
Length = 439
Score = 887 bits (2293), Expect = 0.0
Identities = 439/439 (100%), Positives = 439/439 (100%)
Query: 1 MFSKLAHLQRFAVLSRGVHSSVASATSVATKKTVQGPPTSDDIFEREYKYGAHNYHPLPV 60
MFSKLAHLQRFAVLSRGVHSSVASATSVATKKTVQGPPTSDDIFEREYKYGAHNYHPLPV
Sbjct: 1 MFSKLAHLQRFAVLSRGVHSSVASATSVATKKTVQGPPTSDDIFEREYKYGAHNYHPLPV 60
Query: 61 ALERGKGIYLWDVEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAFYNNVL 120
ALERGKGIYLWDVEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAFYNNVL
Sbjct: 61 ALERGKGIYLWDVEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAFYNNVL 120
Query: 121 GEYEEYITKLFNYHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGR 180
GEYEEYITKLFNYHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGR
Sbjct: 121 GEYEEYITKLFNYHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGR 180
Query: 181 TLSAISSSTDPTSYDGFGPFMPGFDIIPYNDLPALERALQDPNVAAFMVEPIQGEAGVVV 240
TLSAISSSTDPTSYDGFGPFMPGFDIIPYNDLPALERALQDPNVAAFMVEPIQGEAGVVV
Sbjct: 181 TLSAISSSTDPTSYDGFGPFMPGFDIIPYNDLPALERALQDPNVAAFMVEPIQGEAGVVV 240
Query: 241 PDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIVLLGKALSGGLYP 300
PDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIVLLGKALSGGLYP
Sbjct: 241 PDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIVLLGKALSGGLYP 300
Query: 301 VSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNEL 360
VSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNEL
Sbjct: 301 VSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNEL 360
Query: 361 MKLPSDVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPTHGDIIRFAPPLVI 420
MKLPSDVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPTHGDIIRFAPPLVI
Sbjct: 361 MKLPSDVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPTHGDIIRFAPPLVI 420
Query: 421 KEDELRESIEIINKTILSF 439
KEDELRESIEIINKTILSF
Sbjct: 421 KEDELRESIEIINKTILSF 439
>gi|24119277 alanine-glyoxylate aminotransferase 2-like 2 [Homo
sapiens]
Length = 450
Score = 129 bits (323), Expect = 7e-30
Identities = 118/415 (28%), Positives = 194/415 (46%), Gaps = 63/415 (15%)
Query: 59 PVALERGKGIYLWDVEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAFYNN 118
PV + R +G Y++D +G +Y D +S+ + V GHCHP +V A Q L SR ++N
Sbjct: 31 PVKIVRAQGQYMYDEQGAEYIDCISNVAHV--GHCHPLVVQAAHEQNQVLNTNSRYLHDN 88
Query: 119 VLGEYEEYITKLFNYHKVLP--------MNTGVEAGETACKLARKWGYTVKGIQKYKAKI 170
++ +Y +L + LP +N+G EA + A +LAR + G Q +
Sbjct: 89 IV----DYAQRL---SETLPEQLCVFYFLNSGSEANDLALRLARHY----TGHQD----V 133
Query: 171 VFAAGNFWGRTLSAISSSTD-----------------PTSYDG-FGPFMPGFDIIPYNDL 212
V + G S I S P +Y G + P + N++
Sbjct: 134 VVLDHAYHGHLSSLIDISPYKFRNLDGQKEWVHVAPLPDTYRGPYREDHPNPAMAYANEV 193
Query: 213 PALERALQDPN--VAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLA 270
+ + Q+ +AAF E + G ++P GY V E + +F+ADEIQ G
Sbjct: 194 KRVVSSAQEKGRKIAAFFAESLPSVGGQIIPPAGYFSQVAEHIRKAGGVFVADEIQVGFG 253
Query: 271 RTGR--W-LAVDYENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPG--EHGSTYGG 325
R G+ W + ++ PDIV +GK++ G +PV+ V + + E+ +T+GG
Sbjct: 254 RVGKHFWAFQLQGKDFVPDIVTMGKSIGNG-HPVACVAATQPVARAFEATGVEYFNTFGG 312
Query: 326 NPLGCRVAIAALEVLEEENLAENADKLGIILRNEL--MKLPSDVVTAVRGKGLLNAI-VI 382
+P+ C V +A L VLE+E L ++A +G L L K+ +V VRG GL + +I
Sbjct: 313 SPVSCAVGLAVLNVLEKEQLQDHATSVGSFLMQLLGQQKIKHPIVGDVRGVGLFIGVDLI 372
Query: 383 KE-----TKDWDAWKVCLRLRDNGLLAKPTHG---DIIRFAPPLVIKEDELRESI 429
K+ +A + RL++N +L T G +I++F PP+ D R+ +
Sbjct: 373 KDEATRTPATEEAAYLVSRLKENYVLLS-TDGPGRNILKFKPPMCFSLDNARQVV 426
>gi|37574042 alanine-glyoxylate aminotransferase 2-like 1 isoform 1
[Homo sapiens]
Length = 499
Score = 127 bits (320), Expect = 2e-29
Identities = 111/424 (26%), Positives = 196/424 (46%), Gaps = 66/424 (15%)
Query: 59 PVALERGKGIYLWDVEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAFYNN 118
P+ + R + Y++D G +Y D +++ + V GHCHP +V A Q++ L SR ++N
Sbjct: 30 PIKIVRAQRQYMFDENGEQYLDCINNVAHV--GHCHPGVVKAALKQMELLNTNSRFLHDN 87
Query: 119 VLGEYEEYITKLFNYHKVLP--------MNTGVEAGETACKLARKWGYTVKGIQKYKAKI 170
++ EY +L LP N+G EA + A +LAR++ +G Q +
Sbjct: 88 IV----EYAKRL---SATLPEKLSVCYFTNSGSEANDLALRLARQF----RGHQD----V 132
Query: 171 VFAAGNFWGRTLSAISSST------------------DPTSYDGFGPFMPGFDIIPYNDL 212
+ + G S I S P +Y G Y D
Sbjct: 133 ITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKYREDHADSASAYAD- 191
Query: 213 PALERALQDPN-----VAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQT 267
+++ ++D + +AAF+ E +Q G ++P GY V E +FIADE+Q
Sbjct: 192 -EVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHGAGGVFIADEVQV 250
Query: 268 GLARTGR--WLAVDY-ENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPG--EHGST 322
G R G+ W Y E+ PDIV +GK + G +PV+ V+ +I E+ +T
Sbjct: 251 GFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNG-HPVACVVTTKEIAEAFSSSGMEYFNT 309
Query: 323 YGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNEL--MKLPSDVVTAVRGKGLLNAI 380
YGGNP+ C V +A L+++E E+L NA ++G L L K ++ +RG GL I
Sbjct: 310 YGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLTELLKKQKAKHTLIGDIRGIGLFIGI 369
Query: 381 VI------KETKDWDAWKVCLRLRDNGLL--AKPTHGDIIRFAPPLVIKEDELRESIEII 432
+ + +A + ++++ +L A H ++++ PP+ E++ + ++ +
Sbjct: 370 DLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEEDAKFMVDQL 429
Query: 433 NKTI 436
++ +
Sbjct: 430 DRIL 433
>gi|226442709 alanine-glyoxylate aminotransferase 2-like 1 isoform 3
[Homo sapiens]
Length = 441
Score = 114 bits (285), Expect = 2e-25
Identities = 103/392 (26%), Positives = 178/392 (45%), Gaps = 64/392 (16%)
Query: 91 GHCHPKIVNALKSQVDKLTLTSRAFYNNVLGEYEEYITKLFNYHKVLP--------MNTG 142
GHCHP +V A Q++ L SR ++N++ EY +L LP N+G
Sbjct: 2 GHCHPGVVKAALKQMELLNTNSRFLHDNIV----EYAKRL---SATLPEKLSVCYFTNSG 54
Query: 143 VEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSST------------- 189
EA + A +LAR++ +G Q ++ + G S I S
Sbjct: 55 SEANDLALRLARQF----RGHQD----VITLDHAYHGHLSSLIEISPYKFQKGKDVKKEF 106
Query: 190 -----DPTSYDGFGPFMPGFDIIPYNDLPALERALQDPN-----VAAFMVEPIQGEAGVV 239
P +Y G Y D +++ ++D + +AAF+ E +Q G +
Sbjct: 107 VHVAPTPDTYRGKYREDHADSASAYAD--EVKKIIEDAHNSGRKIAAFIAESMQSCGGQI 164
Query: 240 VPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGR--WLAVDY-ENVRPDIVLLGKALSG 296
+P GY V E +FIADE+Q G R G+ W Y E+ PDIV +GK +
Sbjct: 165 IPPAGYFQKVAEYVHGAGGVFIADEVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGN 224
Query: 297 GLYPVSAVLCDDDIMLTIKPG--EHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGI 354
G +PV+ V+ +I E+ +TYGGNP+ C V +A L+++E E+L NA ++G
Sbjct: 225 G-HPVACVVTTKEIAEAFSSSGMEYFNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGN 283
Query: 355 ILRNEL--MKLPSDVVTAVRGKGLLNAIVI------KETKDWDAWKVCLRLRDNGLL--A 404
L L K ++ +RG GL I + + +A + ++++ +L A
Sbjct: 284 YLTELLKKQKAKHTLIGDIRGIGLFIGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSA 343
Query: 405 KPTHGDIIRFAPPLVIKEDELRESIEIINKTI 436
H ++++ PP+ E++ + ++ +++ +
Sbjct: 344 DGPHRNVLKIKPPMCFTEEDAKFMVDQLDRIL 375
>gi|226442705 alanine-glyoxylate aminotransferase 2-like 1 isoform 2
[Homo sapiens]
Length = 493
Score = 110 bits (274), Expect = 3e-24
Identities = 107/424 (25%), Positives = 190/424 (44%), Gaps = 72/424 (16%)
Query: 59 PVALERGKGIYLWDVEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAFYNN 118
P+ + R + Y++D G +Y D ++ N H +V A Q++ L SR ++N
Sbjct: 30 PIKIVRAQRQYMFDENGEQYLDCIN-----NVAH---GVVKAALKQMELLNTNSRFLHDN 81
Query: 119 VLGEYEEYITKLFNYHKVLP--------MNTGVEAGETACKLARKWGYTVKGIQKYKAKI 170
++ EY +L LP N+G EA + A +LAR++ +G Q +
Sbjct: 82 IV----EYAKRL---SATLPEKLSVCYFTNSGSEANDLALRLARQF----RGHQD----V 126
Query: 171 VFAAGNFWGRTLSAISSST------------------DPTSYDGFGPFMPGFDIIPYNDL 212
+ + G S I S P +Y G Y D
Sbjct: 127 ITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKYREDHADSASAYAD- 185
Query: 213 PALERALQDPN-----VAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQT 267
+++ ++D + +AAF+ E +Q G ++P GY V E +FIADE+Q
Sbjct: 186 -EVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHGAGGVFIADEVQV 244
Query: 268 GLARTGR--WLAVDY-ENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPG--EHGST 322
G R G+ W Y E+ PDIV +GK + G +PV+ V+ +I E+ +T
Sbjct: 245 GFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNG-HPVACVVTTKEIAEAFSSSGMEYFNT 303
Query: 323 YGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNEL--MKLPSDVVTAVRGKGLLNAI 380
YGGNP+ C V +A L+++E E+L NA ++G L L K ++ +RG GL I
Sbjct: 304 YGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLTELLKKQKAKHTLIGDIRGIGLFIGI 363
Query: 381 VI------KETKDWDAWKVCLRLRDNGLL--AKPTHGDIIRFAPPLVIKEDELRESIEII 432
+ + +A + ++++ +L A H ++++ PP+ E++ + ++ +
Sbjct: 364 DLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEEDAKFMVDQL 423
Query: 433 NKTI 436
++ +
Sbjct: 424 DRIL 427
>gi|13994255 alanine-glyoxylate aminotransferase 2 precursor [Homo
sapiens]
Length = 514
Score = 105 bits (261), Expect = 1e-22
Identities = 64/168 (38%), Positives = 97/168 (57%), Gaps = 5/168 (2%)
Query: 223 NVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTG-RWLAVDYE 281
++A F EPIQG GVV G+L EL + IADE+QTG R G +
Sbjct: 280 SIAGFFAEPIQGVNGVVQYPKGFLKEAFELVRARGGVCIADEVQTGFGRLGSHFWGFQTH 339
Query: 282 NVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTI-KPGEHGSTYGGNPLGCRVAIAALEVL 340
+V PDIV + K + G +P++AV+ +I ++ K +H +T+GGNP+ C + A LEV+
Sbjct: 340 DVLPDIVTMAKGIGNG-FPMAAVITTPEIAKSLAKCLQHFNTFGGNPMACAIGSAVLEVI 398
Query: 341 EEENLAENADKLGIILRNELMKLPS--DVVTAVRGKGLLNAIVIKETK 386
+EENL EN+ ++G + + KL ++V VRGKGL+ I + + K
Sbjct: 399 KEENLQENSQEVGTYMLLKFAKLRDEFEIVGDVRGKGLMIGIEMVQDK 446
Score = 66.2 bits (160), Expect = 5e-11
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 55 YHPLPVALERGKGIYLWDVEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRA 114
Y P+ L +G +L+D EG +Y DF S V+ GHCHPK+ + Q+ +L TS
Sbjct: 81 YFQKPLLLHQGHMEWLFDAEGSRYLDFFSGIVTVSVGHCHPKVNAVAQKQLGRLWHTSTV 140
Query: 115 FYNNVLGEYEEYITKLF--NYHKVLPMNTGVEAGETACKLAR 154
F++ + EY E + L + +N+G EA E A +AR
Sbjct: 141 FFHPPMHEYAEKLAALLPEPLKVIFLVNSGSEANELAMLMAR 182
>gi|188536080 4-aminobutyrate aminotransferase precursor [Homo
sapiens]
Length = 500
Score = 68.9 bits (167), Expect = 8e-12
Identities = 90/437 (20%), Positives = 168/437 (38%), Gaps = 75/437 (17%)
Query: 63 ERGKGIYLWDVEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAFYNNVLGE 122
E +G YL DV+G + D S S+V G+ HP ++ ++ + +R +
Sbjct: 78 EESRGNYLVDVDGNRMLDLYSQISSVPIGYSHPALLKLIQQPQNASMFVNRPALGIL--P 135
Query: 123 YEEYITKLFN---------YHKVLPMNTGVEAGETACKLARKW---------GYTVKGIQ 164
E ++ KL +++ M G + E A K W G++ + ++
Sbjct: 136 PENFVEKLRQSLLSVAPKGMSQLITMACGSCSNENALKTIFMWYRSKERGQRGFSQEELE 195
Query: 165 KYKAK---------IVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYNDLPAL 215
I+ G F GRT+ ++++ + +P FD P P L
Sbjct: 196 TCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHK---IDIPSFDW-PIAPFPRL 251
Query: 216 ERALQD---------------------------PNVAAFMVEPIQGEAGVVVPDPGYLMG 248
+ L++ VA +VEPIQ E G +
Sbjct: 252 KYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRK 311
Query: 249 VRELCTRHQVLFIADEIQTGLARTGRWLAVDY---ENVRPDIVLLGKALSGGLYPVSAVL 305
+R++ +H F+ DE+QTG TG++ A ++ ++ + K ++GG +
Sbjct: 312 LRDIARKHGCAFLVDEVQTGGGCTGKFWAHEHWGLDDPADVMTFSKKMMTGGFF------ 365
Query: 306 CDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKLPS 365
+ P +T+ G+P + + +++ E+L NA G L L+ L +
Sbjct: 366 -HKEEFRPNAPYRIFNTWLGDPSKNLLLAEVINIIKREDLLNNAAHAGKALLTGLLDLQA 424
Query: 366 ---DVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPTHGDIIRFAPPLVIKE 422
++ VRG+G + + D K+ L R+ G++ IRF P LV ++
Sbjct: 425 RYPQFISRVRGRGTFCSFDTPD--DSIRNKLILIARNKGVVLGGCGDKSIRFRPTLVFRD 482
Query: 423 DELRESIEIINKTILSF 439
+ I + + F
Sbjct: 483 HHAHLFLNIFSDILADF 499
>gi|38679950 4-aminobutyrate aminotransferase precursor [Homo
sapiens]
Length = 500
Score = 68.9 bits (167), Expect = 8e-12
Identities = 90/437 (20%), Positives = 168/437 (38%), Gaps = 75/437 (17%)
Query: 63 ERGKGIYLWDVEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAFYNNVLGE 122
E +G YL DV+G + D S S+V G+ HP ++ ++ + +R +
Sbjct: 78 EESRGNYLVDVDGNRMLDLYSQISSVPIGYSHPALLKLIQQPQNASMFVNRPALGIL--P 135
Query: 123 YEEYITKLFN---------YHKVLPMNTGVEAGETACKLARKW---------GYTVKGIQ 164
E ++ KL +++ M G + E A K W G++ + ++
Sbjct: 136 PENFVEKLRQSLLSVAPKGMSQLITMACGSCSNENALKTIFMWYRSKERGQRGFSQEELE 195
Query: 165 KYKAK---------IVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYNDLPAL 215
I+ G F GRT+ ++++ + +P FD P P L
Sbjct: 196 TCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHK---IDIPSFDW-PIAPFPRL 251
Query: 216 ERALQD---------------------------PNVAAFMVEPIQGEAGVVVPDPGYLMG 248
+ L++ VA +VEPIQ E G +
Sbjct: 252 KYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRK 311
Query: 249 VRELCTRHQVLFIADEIQTGLARTGRWLAVDY---ENVRPDIVLLGKALSGGLYPVSAVL 305
+R++ +H F+ DE+QTG TG++ A ++ ++ + K ++GG +
Sbjct: 312 LRDIARKHGCAFLVDEVQTGGGCTGKFWAHEHWGLDDPADVMTFSKKMMTGGFF------ 365
Query: 306 CDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKLPS 365
+ P +T+ G+P + + +++ E+L NA G L L+ L +
Sbjct: 366 -HKEEFRPNAPYRIFNTWLGDPSKNLLLAEVINIIKREDLLNNAAHAGKALLTGLLDLQA 424
Query: 366 ---DVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPTHGDIIRFAPPLVIKE 422
++ VRG+G + + D K+ L R+ G++ IRF P LV ++
Sbjct: 425 RYPQFISRVRGRGTFCSFDTPD--DSIRNKLILIARNKGVVLGGCGDKSIRFRPTLVFRD 482
Query: 423 DELRESIEIINKTILSF 439
+ I + + F
Sbjct: 483 HHAHLFLNIFSDILADF 499
>gi|38679946 4-aminobutyrate aminotransferase precursor [Homo
sapiens]
Length = 500
Score = 68.9 bits (167), Expect = 8e-12
Identities = 90/437 (20%), Positives = 168/437 (38%), Gaps = 75/437 (17%)
Query: 63 ERGKGIYLWDVEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAFYNNVLGE 122
E +G YL DV+G + D S S+V G+ HP ++ ++ + +R +
Sbjct: 78 EESRGNYLVDVDGNRMLDLYSQISSVPIGYSHPALLKLIQQPQNASMFVNRPALGIL--P 135
Query: 123 YEEYITKLFN---------YHKVLPMNTGVEAGETACKLARKW---------GYTVKGIQ 164
E ++ KL +++ M G + E A K W G++ + ++
Sbjct: 136 PENFVEKLRQSLLSVAPKGMSQLITMACGSCSNENALKTIFMWYRSKERGQRGFSQEELE 195
Query: 165 KYKAK---------IVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYNDLPAL 215
I+ G F GRT+ ++++ + +P FD P P L
Sbjct: 196 TCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHK---IDIPSFDW-PIAPFPRL 251
Query: 216 ERALQD---------------------------PNVAAFMVEPIQGEAGVVVPDPGYLMG 248
+ L++ VA +VEPIQ E G +
Sbjct: 252 KYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRK 311
Query: 249 VRELCTRHQVLFIADEIQTGLARTGRWLAVDY---ENVRPDIVLLGKALSGGLYPVSAVL 305
+R++ +H F+ DE+QTG TG++ A ++ ++ + K ++GG +
Sbjct: 312 LRDIARKHGCAFLVDEVQTGGGCTGKFWAHEHWGLDDPADVMTFSKKMMTGGFF------ 365
Query: 306 CDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKLPS 365
+ P +T+ G+P + + +++ E+L NA G L L+ L +
Sbjct: 366 -HKEEFRPNAPYRIFNTWLGDPSKNLLLAEVINIIKREDLLNNAAHAGKALLTGLLDLQA 424
Query: 366 ---DVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPTHGDIIRFAPPLVIKE 422
++ VRG+G + + D K+ L R+ G++ IRF P LV ++
Sbjct: 425 RYPQFISRVRGRGTFCSFDTPD--DSIRNKLILIARNKGVVLGGCGDKSIRFRPTLVFRD 482
Query: 423 DELRESIEIINKTILSF 439
+ I + + F
Sbjct: 483 HHAHLFLNIFSDILADF 499
>gi|13375727 acyl-CoA synthetase short-chain family member 3 [Homo
sapiens]
Length = 686
Score = 32.7 bits (73), Expect = 0.67
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
Query: 193 SYDGFGPFMPGFDIIPYNDLP-------ALERALQDPNVAAFMVEPIQGEAGVVVPDPGY 245
SY +GP + G + Y P A R L + VAA P A + DPG
Sbjct: 349 SYICYGPLLHGNTTVLYEGKPVGTPDAGAYFRVLAEHGVAALFTAPTAIRA-IRQQDPGA 407
Query: 246 LMGVRELCTRHQVLFIADE 264
+G + TR + LF+A E
Sbjct: 408 ALGKQYSLTRFKTLFVAGE 426
>gi|91598777 transmembrane protein 146 [Homo sapiens]
Length = 798
Score = 29.3 bits (64), Expect = 7.4
Identities = 15/32 (46%), Positives = 16/32 (50%)
Query: 157 GYTVKGIQKYKAKIVFAAGNFWGRTLSAISSS 188
GYT G KYK I WGRT S +SS
Sbjct: 445 GYTSDGNTKYKLDIFLKQQQHWGRTDSNFTSS 476
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.138 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,759,776
Number of Sequences: 37866
Number of extensions: 731932
Number of successful extensions: 1448
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1416
Number of HSP's gapped (non-prelim): 19
length of query: 439
length of database: 18,247,518
effective HSP length: 105
effective length of query: 334
effective length of database: 14,271,588
effective search space: 4766710392
effective search space used: 4766710392
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.