Search of human proteins with 45545411

Search of human proteins with 45545411

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|45545411 NCK-associated protein 1 isoform 2 [Homo sapiens]
         (1134 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|45545411 NCK-associated protein 1 isoform 2 [Homo sapiens]        2240   0.0  
gi|7305303 NCK-associated protein 1 isoform 1 [Homo sapiens]         2219   0.0  
gi|34485727 NCK-associated protein 1-like [Homo sapiens]             1372   0.0  
gi|110815815 centlein isoform 1 [Homo sapiens]                         32   4.5  
gi|38788416 laminin, alpha 1 precursor [Homo sapiens]                  31   5.8  
gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precurs...    31   5.8  
gi|14270502 protocadherin gamma subfamily B, 6 isoform 2 precurs...    31   5.8  
gi|226053185 paternally expressed 3 isoform 3 [Homo sapiens]           30   10.0 
gi|226053169 paternally expressed 3 isoform 1 [Homo sapiens]           30   10.0 
gi|226053148 paternally expressed 3 isoform 2 [Homo sapiens]           30   10.0 
gi|226053126 paternally expressed 3 isoform 1 [Homo sapiens]           30   10.0 
gi|33354285 paternally expressed 3 isoform 1 [Homo sapiens]            30   10.0 
gi|44888835 ATPase, class I, type 8B, member 3 [Homo sapiens]          30   10.0 

>gi|45545411 NCK-associated protein 1 isoform 2 [Homo sapiens]
          Length = 1134

 Score = 2240 bits (5804), Expect = 0.0
 Identities = 1134/1134 (100%), Positives = 1134/1134 (100%)

Query: 1    MSRSVLQPSQQKLAEKLTILNDRGVGMLTRLYNIKKQGQVWKACGDPKAKPSYLIDKNLE 60
            MSRSVLQPSQQKLAEKLTILNDRGVGMLTRLYNIKKQGQVWKACGDPKAKPSYLIDKNLE
Sbjct: 1    MSRSVLQPSQQKLAEKLTILNDRGVGMLTRLYNIKKQGQVWKACGDPKAKPSYLIDKNLE 60

Query: 61   SAVKFIVRKFPAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHVCELLNTI 120
            SAVKFIVRKFPAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHVCELLNTI
Sbjct: 61   SAVKFIVRKFPAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHVCELLNTI 120

Query: 121  DVCQVFFDITVNFDLTKNYLDLIITYTTLMILLSRIEERKAIIGLYNYAHEMTHGASDRE 180
            DVCQVFFDITVNFDLTKNYLDLIITYTTLMILLSRIEERKAIIGLYNYAHEMTHGASDRE
Sbjct: 121  DVCQVFFDITVNFDLTKNYLDLIITYTTLMILLSRIEERKAIIGLYNYAHEMTHGASDRE 180

Query: 181  YPRLGQMIVDYENPLKKMMEEFVPHSKSLSDALISLQMVYPRRNLSADQWRNAQLLSLIS 240
            YPRLGQMIVDYENPLKKMMEEFVPHSKSLSDALISLQMVYPRRNLSADQWRNAQLLSLIS
Sbjct: 181  YPRLGQMIVDYENPLKKMMEEFVPHSKSLSDALISLQMVYPRRNLSADQWRNAQLLSLIS 240

Query: 241  APSTMLNPAQSDTMPCEYLSLDAMEKWIIFGFILCHGILNTDATALNLWKLALQSSSCLS 300
            APSTMLNPAQSDTMPCEYLSLDAMEKWIIFGFILCHGILNTDATALNLWKLALQSSSCLS
Sbjct: 241  APSTMLNPAQSDTMPCEYLSLDAMEKWIIFGFILCHGILNTDATALNLWKLALQSSSCLS 300

Query: 301  LFRDEVFHIHKAAEDLFVNIRGYNKRINDIRECKEAAVSHAGSMHRERRKFLRSALKELA 360
            LFRDEVFHIHKAAEDLFVNIRGYNKRINDIRECKEAAVSHAGSMHRERRKFLRSALKELA
Sbjct: 301  LFRDEVFHIHKAAEDLFVNIRGYNKRINDIRECKEAAVSHAGSMHRERRKFLRSALKELA 360

Query: 361  TVLSDQPGLLGPKALFVFMALSFARDEIIWLLRHADNMPKKSADDFIDKHIAELIFYMEE 420
            TVLSDQPGLLGPKALFVFMALSFARDEIIWLLRHADNMPKKSADDFIDKHIAELIFYMEE
Sbjct: 361  TVLSDQPGLLGPKALFVFMALSFARDEIIWLLRHADNMPKKSADDFIDKHIAELIFYMEE 420

Query: 421  LRAHVRKYGPVMQRYYVQYLSGFDAVVLNELVQNLSVCPEDESIIMSSFVNTMTSLSVKQ 480
            LRAHVRKYGPVMQRYYVQYLSGFDAVVLNELVQNLSVCPEDESIIMSSFVNTMTSLSVKQ
Sbjct: 421  LRAHVRKYGPVMQRYYVQYLSGFDAVVLNELVQNLSVCPEDESIIMSSFVNTMTSLSVKQ 480

Query: 481  VEDGEVFDFRGMRLDWFRLQAYTSVSKASLGLADHRELGKMMNTIIFHTKMVDSLVEMLV 540
            VEDGEVFDFRGMRLDWFRLQAYTSVSKASLGLADHRELGKMMNTIIFHTKMVDSLVEMLV
Sbjct: 481  VEDGEVFDFRGMRLDWFRLQAYTSVSKASLGLADHRELGKMMNTIIFHTKMVDSLVEMLV 540

Query: 541  ETSDLSIFCFYSRAFEKMFQQCLELPSQSRYSIAFPLLCTHFMSCTHELCPEERHHIGDR 600
            ETSDLSIFCFYSRAFEKMFQQCLELPSQSRYSIAFPLLCTHFMSCTHELCPEERHHIGDR
Sbjct: 541  ETSDLSIFCFYSRAFEKMFQQCLELPSQSRYSIAFPLLCTHFMSCTHELCPEERHHIGDR 600

Query: 601  SLSLCNMFLDEMAKQARNLITDICTEQCTLSDQLLPKHCAKTISQAVNKKSKKQTGKKGE 660
            SLSLCNMFLDEMAKQARNLITDICTEQCTLSDQLLPKHCAKTISQAVNKKSKKQTGKKGE
Sbjct: 601  SLSLCNMFLDEMAKQARNLITDICTEQCTLSDQLLPKHCAKTISQAVNKKSKKQTGKKGE 660

Query: 661  PEREKPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEI 720
            PEREKPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEI
Sbjct: 661  PEREKPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEI 720

Query: 721  RFTKSIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQ 780
            RFTKSIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQ
Sbjct: 721  RFTKSIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQ 780

Query: 781  HLDSHGEPTITSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDIS 840
            HLDSHGEPTITSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDIS
Sbjct: 781  HLDSHGEPTITSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDIS 840

Query: 841  EMRSLSELLGPYGMKFLSESLMWHISSQVAELKKLVVENVDVLTQMRTSFDKPDQMAALF 900
            EMRSLSELLGPYGMKFLSESLMWHISSQVAELKKLVVENVDVLTQMRTSFDKPDQMAALF
Sbjct: 841  EMRSLSELLGPYGMKFLSESLMWHISSQVAELKKLVVENVDVLTQMRTSFDKPDQMAALF 900

Query: 901  KRLSSVDSVLKRMTIIGVILSFRSLAQEALRDVLSYHIPFLVSSIEDFKDHIPRETDMKV 960
            KRLSSVDSVLKRMTIIGVILSFRSLAQEALRDVLSYHIPFLVSSIEDFKDHIPRETDMKV
Sbjct: 901  KRLSSVDSVLKRMTIIGVILSFRSLAQEALRDVLSYHIPFLVSSIEDFKDHIPRETDMKV 960

Query: 961  AMNVYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNV 1020
            AMNVYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNV
Sbjct: 961  AMNVYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNV 1020

Query: 1021 MSQYSPAIEGHCNNIHCLAKAINQIAAALFTIHKGSIEDRLKEFLALASSSLLKIGQETD 1080
            MSQYSPAIEGHCNNIHCLAKAINQIAAALFTIHKGSIEDRLKEFLALASSSLLKIGQETD
Sbjct: 1021 MSQYSPAIEGHCNNIHCLAKAINQIAAALFTIHKGSIEDRLKEFLALASSSLLKIGQETD 1080

Query: 1081 KTTTRNRESVYLLLDMIVQESPFLTMDLLESCFPYVLLRNAYHAVYKQSVTSSA 1134
            KTTTRNRESVYLLLDMIVQESPFLTMDLLESCFPYVLLRNAYHAVYKQSVTSSA
Sbjct: 1081 KTTTRNRESVYLLLDMIVQESPFLTMDLLESCFPYVLLRNAYHAVYKQSVTSSA 1134


>gi|7305303 NCK-associated protein 1 isoform 1 [Homo sapiens]
          Length = 1128

 Score = 2219 bits (5751), Expect = 0.0
 Identities = 1128/1134 (99%), Positives = 1128/1134 (99%), Gaps = 6/1134 (0%)

Query: 1    MSRSVLQPSQQKLAEKLTILNDRGVGMLTRLYNIKKQGQVWKACGDPKAKPSYLIDKNLE 60
            MSRSVLQPSQQKLAEKLTILNDRGVGMLTRLYNIKK      ACGDPKAKPSYLIDKNLE
Sbjct: 1    MSRSVLQPSQQKLAEKLTILNDRGVGMLTRLYNIKK------ACGDPKAKPSYLIDKNLE 54

Query: 61   SAVKFIVRKFPAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHVCELLNTI 120
            SAVKFIVRKFPAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHVCELLNTI
Sbjct: 55   SAVKFIVRKFPAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHVCELLNTI 114

Query: 121  DVCQVFFDITVNFDLTKNYLDLIITYTTLMILLSRIEERKAIIGLYNYAHEMTHGASDRE 180
            DVCQVFFDITVNFDLTKNYLDLIITYTTLMILLSRIEERKAIIGLYNYAHEMTHGASDRE
Sbjct: 115  DVCQVFFDITVNFDLTKNYLDLIITYTTLMILLSRIEERKAIIGLYNYAHEMTHGASDRE 174

Query: 181  YPRLGQMIVDYENPLKKMMEEFVPHSKSLSDALISLQMVYPRRNLSADQWRNAQLLSLIS 240
            YPRLGQMIVDYENPLKKMMEEFVPHSKSLSDALISLQMVYPRRNLSADQWRNAQLLSLIS
Sbjct: 175  YPRLGQMIVDYENPLKKMMEEFVPHSKSLSDALISLQMVYPRRNLSADQWRNAQLLSLIS 234

Query: 241  APSTMLNPAQSDTMPCEYLSLDAMEKWIIFGFILCHGILNTDATALNLWKLALQSSSCLS 300
            APSTMLNPAQSDTMPCEYLSLDAMEKWIIFGFILCHGILNTDATALNLWKLALQSSSCLS
Sbjct: 235  APSTMLNPAQSDTMPCEYLSLDAMEKWIIFGFILCHGILNTDATALNLWKLALQSSSCLS 294

Query: 301  LFRDEVFHIHKAAEDLFVNIRGYNKRINDIRECKEAAVSHAGSMHRERRKFLRSALKELA 360
            LFRDEVFHIHKAAEDLFVNIRGYNKRINDIRECKEAAVSHAGSMHRERRKFLRSALKELA
Sbjct: 295  LFRDEVFHIHKAAEDLFVNIRGYNKRINDIRECKEAAVSHAGSMHRERRKFLRSALKELA 354

Query: 361  TVLSDQPGLLGPKALFVFMALSFARDEIIWLLRHADNMPKKSADDFIDKHIAELIFYMEE 420
            TVLSDQPGLLGPKALFVFMALSFARDEIIWLLRHADNMPKKSADDFIDKHIAELIFYMEE
Sbjct: 355  TVLSDQPGLLGPKALFVFMALSFARDEIIWLLRHADNMPKKSADDFIDKHIAELIFYMEE 414

Query: 421  LRAHVRKYGPVMQRYYVQYLSGFDAVVLNELVQNLSVCPEDESIIMSSFVNTMTSLSVKQ 480
            LRAHVRKYGPVMQRYYVQYLSGFDAVVLNELVQNLSVCPEDESIIMSSFVNTMTSLSVKQ
Sbjct: 415  LRAHVRKYGPVMQRYYVQYLSGFDAVVLNELVQNLSVCPEDESIIMSSFVNTMTSLSVKQ 474

Query: 481  VEDGEVFDFRGMRLDWFRLQAYTSVSKASLGLADHRELGKMMNTIIFHTKMVDSLVEMLV 540
            VEDGEVFDFRGMRLDWFRLQAYTSVSKASLGLADHRELGKMMNTIIFHTKMVDSLVEMLV
Sbjct: 475  VEDGEVFDFRGMRLDWFRLQAYTSVSKASLGLADHRELGKMMNTIIFHTKMVDSLVEMLV 534

Query: 541  ETSDLSIFCFYSRAFEKMFQQCLELPSQSRYSIAFPLLCTHFMSCTHELCPEERHHIGDR 600
            ETSDLSIFCFYSRAFEKMFQQCLELPSQSRYSIAFPLLCTHFMSCTHELCPEERHHIGDR
Sbjct: 535  ETSDLSIFCFYSRAFEKMFQQCLELPSQSRYSIAFPLLCTHFMSCTHELCPEERHHIGDR 594

Query: 601  SLSLCNMFLDEMAKQARNLITDICTEQCTLSDQLLPKHCAKTISQAVNKKSKKQTGKKGE 660
            SLSLCNMFLDEMAKQARNLITDICTEQCTLSDQLLPKHCAKTISQAVNKKSKKQTGKKGE
Sbjct: 595  SLSLCNMFLDEMAKQARNLITDICTEQCTLSDQLLPKHCAKTISQAVNKKSKKQTGKKGE 654

Query: 661  PEREKPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEI 720
            PEREKPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEI
Sbjct: 655  PEREKPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEI 714

Query: 721  RFTKSIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQ 780
            RFTKSIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQ
Sbjct: 715  RFTKSIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQ 774

Query: 781  HLDSHGEPTITSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDIS 840
            HLDSHGEPTITSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDIS
Sbjct: 775  HLDSHGEPTITSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDIS 834

Query: 841  EMRSLSELLGPYGMKFLSESLMWHISSQVAELKKLVVENVDVLTQMRTSFDKPDQMAALF 900
            EMRSLSELLGPYGMKFLSESLMWHISSQVAELKKLVVENVDVLTQMRTSFDKPDQMAALF
Sbjct: 835  EMRSLSELLGPYGMKFLSESLMWHISSQVAELKKLVVENVDVLTQMRTSFDKPDQMAALF 894

Query: 901  KRLSSVDSVLKRMTIIGVILSFRSLAQEALRDVLSYHIPFLVSSIEDFKDHIPRETDMKV 960
            KRLSSVDSVLKRMTIIGVILSFRSLAQEALRDVLSYHIPFLVSSIEDFKDHIPRETDMKV
Sbjct: 895  KRLSSVDSVLKRMTIIGVILSFRSLAQEALRDVLSYHIPFLVSSIEDFKDHIPRETDMKV 954

Query: 961  AMNVYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNV 1020
            AMNVYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNV
Sbjct: 955  AMNVYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNV 1014

Query: 1021 MSQYSPAIEGHCNNIHCLAKAINQIAAALFTIHKGSIEDRLKEFLALASSSLLKIGQETD 1080
            MSQYSPAIEGHCNNIHCLAKAINQIAAALFTIHKGSIEDRLKEFLALASSSLLKIGQETD
Sbjct: 1015 MSQYSPAIEGHCNNIHCLAKAINQIAAALFTIHKGSIEDRLKEFLALASSSLLKIGQETD 1074

Query: 1081 KTTTRNRESVYLLLDMIVQESPFLTMDLLESCFPYVLLRNAYHAVYKQSVTSSA 1134
            KTTTRNRESVYLLLDMIVQESPFLTMDLLESCFPYVLLRNAYHAVYKQSVTSSA
Sbjct: 1075 KTTTRNRESVYLLLDMIVQESPFLTMDLLESCFPYVLLRNAYHAVYKQSVTSSA 1128


>gi|34485727 NCK-associated protein 1-like [Homo sapiens]
          Length = 1127

 Score = 1372 bits (3550), Expect = 0.0
 Identities = 664/1125 (59%), Positives = 890/1125 (79%), Gaps = 9/1125 (0%)

Query: 4    SVLQPSQQKLAEKLTILNDRGVGMLTRLYNIKKQGQVWKACGDPKAKPSYLIDKNLESAV 63
            S+    Q KLAEKLTILNDRG G+L R+YNIKK       C DPK+KP +L++K++E ++
Sbjct: 2    SLTSAYQHKLAEKLTILNDRGQGVLIRMYNIKK------TCSDPKSKPPFLLEKSMEPSL 55

Query: 64   KFIVRKFPAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHVCELLNTIDVC 123
            K+I +KFP ++ RN+ Q L  + +EK+EI++ L  YY +FVDVMEF+DHV ELLNTID C
Sbjct: 56   KYINKKFPNIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVYELLNTIDAC 115

Query: 124  QVFFDITVNFDLTKNYLDLIITYTTLMILLSRIEERKAIIGLYNYAHEMTHGASDREYPR 183
            Q  FDI +NFD T++YLDLI+TYT++++LLSRIE+R+ +IG+YN AHEM HG  D  + R
Sbjct: 116  QCHFDINLNFDFTRSYLDLIVTYTSVILLLSRIEDRRILIGMYNCAHEMLHGHGDPSFAR 175

Query: 184  LGQMIVDYENPLKKMMEEFVPHSKSLSDALISLQMVYPRRNLSADQWRNAQLLSLISAPS 243
            LGQM+++Y++PLKK+ EEF PH+K++S AL+SL  ++ RRN  A+QWR+AQLLSLIS P 
Sbjct: 176  LGQMVLEYDHPLKKLTEEFGPHTKAVSGALLSLHFLFVRRNQGAEQWRSAQLLSLISNPP 235

Query: 244  TMLNPAQSDTMPCEYLSLDAMEKWIIFGFILCHGILNTDATALNLWKLALQSSSCLSLFR 303
             M+NPA SDTM CEYLS++ ME+WII GF+LCHG LN+++    LWKL LQ S  ++L R
Sbjct: 236  AMINPANSDTMACEYLSVEVMERWIIIGFLLCHGCLNSNSQCQKLWKLCLQGSLYITLIR 295

Query: 304  DEVFHIHKAAEDLFVNIRGYNKRINDIRECKEAAVSHAGSMHRERRKFLRSALKELATVL 363
            ++V  +HK  EDLF +++GY KR+ DI+E KE  ++++G  H +RR+FLR A+KEL TVL
Sbjct: 296  EDVLQVHKVTEDLFSSLKGYGKRVADIKESKEHVIANSGQFHCQRRQFLRMAVKELETVL 355

Query: 364  SDQPGLLGPKALFVFMALSFARDEIIWLLRHADNMPK-KSADDFIDKHIAELIFYMEELR 422
            +D+PGLLGPKALF FMALSF RDE+ WL+RH +N+ K K+ +D+ D  IAEL+F +E +R
Sbjct: 356  ADEPGLLGPKALFAFMALSFIRDEVTWLVRHTENVTKTKTPEDYADSSIAELLFLLEGIR 415

Query: 423  AHVRKYGPVMQRYYVQYLSGFDAVVLNELVQNLSVCPEDESIIMSSFVNTMTSLSVKQVE 482
            + VR++  V+Q+Y++QYL+ FDA+VL++++QNLSVCPE+ESIIMSSFV+ ++SL++KQV+
Sbjct: 416  SLVRRHIKVIQQYHLQYLARFDALVLSDIIQNLSVCPEEESIIMSSFVSILSSLNLKQVD 475

Query: 483  DGEVFDFRGMRLDWFRLQAYTSVSKASLGLADHRELGKMMNTIIFHTKMVDSLVEMLVET 542
            +GE F+F G+RLDWFRLQAYTSV+KA L L ++ +L K+MN I+FH++M+DS+ ++LVET
Sbjct: 476  NGEKFEFSGLRLDWFRLQAYTSVAKAPLHLHENPDLAKVMNLIVFHSRMLDSVEKLLVET 535

Query: 543  SDLSIFCFYSRAFEKMFQQCLELPSQSRYSIAFPLLCTHFMSCTHELCPEERHHIGDRSL 602
            SDLS FCF+ R FEKMF   LE  +  RY+IAFPL+C HF+ CTHE+CPEE  H+ +  L
Sbjct: 536  SDLSTFCFHLRIFEKMFAMTLEESAMLRYAIAFPLICAHFVHCTHEMCPEEYPHLKNHGL 595

Query: 603  SLCNMFLDEMAKQARNLITDICTEQCTLSDQLLPKHCAKTISQAVNKKSKKQ--TGKKGE 660
              CN FL+E+AKQ  N + +IC EQ  LS+QLLPKHCA TIS+A NKK++KQ  T +KGE
Sbjct: 596  HHCNSFLEELAKQTSNCVLEICAEQRNLSEQLLPKHCATTISKAKNKKTRKQRQTPRKGE 655

Query: 661  PEREKPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEI 720
            PER+KPG ES RKNR +VTN+DKLH  L+EL  ++N+V +  V+EHT  P EYL+SHLE 
Sbjct: 656  PERDKPGAESHRKNRSIVTNMDKLHLNLTELALTMNHVYSFSVFEHTIFPSEYLSSHLEA 715

Query: 721  RFTKSIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQ 780
            R  ++IV +  YN  TQEI +PSELL  V+AY+  +QS+  ++  D +RV  N LLQQTQ
Sbjct: 716  RLNRAIVWLAGYNATTQEIVRPSELLAGVKAYIGFIQSLAQFLGADASRVIRNALLQQTQ 775

Query: 781  HLDSHGEPTITSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDIS 840
             LDS GE TIT+LYTNWYLE+LLRQ S+G I   PAM+AFV+LP E E  F+AEE+SDIS
Sbjct: 776  PLDSCGEQTITTLYTNWYLESLLRQASSGTIILSPAMQAFVSLPREGEQNFSAEEFSDIS 835

Query: 841  EMRSLSELLGPYGMKFLSESLMWHISSQVAELKKLVVENVDVLTQMRTSFDKPDQMAALF 900
            EMR+L+ELLGPYGMKFLSE+LMWH++SQ+ ELKKLVVEN+D+L Q+R++F KPD MA+L 
Sbjct: 836  EMRALAELLGPYGMKFLSENLMWHVTSQIVELKKLVVENMDILVQIRSNFSKPDLMASLL 895

Query: 901  KRLSSVDSVLKRMTIIGVILSFRSLAQEALRDVLSYHIPFLVSSIEDFKDHIPRETDMKV 960
             +L+  ++VLKRMTIIGVILSFR++AQE LR+V S H PFL+  IE  K+ +  +TD+KV
Sbjct: 896  PQLTGAENVLKRMTIIGVILSFRAMAQEGLREVFSSHCPFLMGPIECLKEFVTPDTDIKV 955

Query: 961  AMNVYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNV 1020
             ++++EL+SAAG+ C+IDPALV A+++ K++  SPEEEYK+ACLL++F+AVSLP LA++ 
Sbjct: 956  TLSIFELASAAGVGCDIDPALVAAIANLKADTSSPEEEYKVACLLLIFLAVSLPLLATDP 1015

Query: 1021 MSQYSPAIEGHCNNIHCLAKAINQIAAALFTIHKGSIEDRLKEFLALASSSLLKIGQETD 1080
             S YS   +G+ NNIHCL KAI Q++AALFT++  +IE  LKEFL +AS SLL++GQETD
Sbjct: 1016 SSFYSIEKDGYNNNIHCLTKAIIQVSAALFTLYNKNIETHLKEFLVVASVSLLQLGQETD 1075

Query: 1081 KTTTRNRESVYLLLDMIVQESPFLTMDLLESCFPYVLLRNAYHAV 1125
            K  TRNRES+ LL+ ++V+ES FLT+D+LESCFPYVLLRNAY  V
Sbjct: 1076 KLKTRNRESISLLMRLVVEESSFLTLDMLESCFPYVLLRNAYREV 1120


>gi|110815815 centlein isoform 1 [Homo sapiens]
          Length = 1406

 Score = 31.6 bits (70), Expect = 4.5
 Identities = 41/189 (21%), Positives = 77/189 (40%), Gaps = 17/189 (8%)

Query: 600  RSLSLCNMFLDEMAKQARNLITDICTEQCTLSDQLLPKH-CAKTISQAVNKKSKKQTGKK 658
            RS+ L    L    K A N +T   +   TL  +LL K    K + + +++  +  T K+
Sbjct: 1088 RSMDLEMKQLQYKLKNATNELTKQSSNVKTLKFELLAKEEHIKEMHEKISRMERDITMKR 1147

Query: 659  GEPE----REKPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYL 714
               E    R+K  +ES +    ++ NLDK    L+E C             +     + L
Sbjct: 1148 HLIEDLKFRQKVNLESNKSFSEMLQNLDKKVKTLTEEC------------SNKKVSIDSL 1195

Query: 715  TSHLEIRFTKSIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNV 774
               L +   +      MY ++ +E+ K    LT + + ++  +S    ++   ++    +
Sbjct: 1196 KQRLNVAVKEKSQYEQMYQKSKEELEKKDLKLTLLVSRISETESAMAEIETAASKQLQEL 1255

Query: 775  LLQQTQHLD 783
             LQ  Q L+
Sbjct: 1256 ALQSEQVLE 1264


>gi|38788416 laminin, alpha 1 precursor [Homo sapiens]
          Length = 3075

 Score = 31.2 bits (69), Expect = 5.8
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 311  KAAEDLFVNIR-GYNKRINDIRECKEAAVSHAGSMHRERRKFLRSALKELATVLSDQPGL 369
            KAAEDL   I+  Y K + ++   KEAA SH  S H    K   + ++E    + +   L
Sbjct: 1723 KAAEDLLSQIQENYQKPLEELEVLKEAA-SHVLSKHNNELKAAEALVREAEAKMQESNHL 1781

Query: 370  L 370
            L
Sbjct: 1782 L 1782


>gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precursor
            [Homo sapiens]
          Length = 930

 Score = 31.2 bits (69), Expect = 5.8
 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 7/57 (12%)

Query: 945  IEDFKDHIPRETDMKVAMNVYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKI 1001
            IED  DH P+    ++ + ++E S++AG    +DPA      +    NI+  ++YKI
Sbjct: 123  IEDVNDHAPQFDKKEIHLEIFE-SASAGTRLSLDPA------TDPDININSIKDYKI 172


>gi|14270502 protocadherin gamma subfamily B, 6 isoform 2 precursor
            [Homo sapiens]
          Length = 820

 Score = 31.2 bits (69), Expect = 5.8
 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 7/57 (12%)

Query: 945  IEDFKDHIPRETDMKVAMNVYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKI 1001
            IED  DH P+    ++ + ++E S++AG    +DPA      +    NI+  ++YKI
Sbjct: 123  IEDVNDHAPQFDKKEIHLEIFE-SASAGTRLSLDPA------TDPDININSIKDYKI 172


>gi|226053185 paternally expressed 3 isoform 3 [Homo sapiens]
          Length = 1464

 Score = 30.4 bits (67), Expect = 10.0
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 23/94 (24%)

Query: 155  RIEERKAIIGLYNYAHEMTHGASDREYPR--LGQMIVDYENPLKKMMEEFVPHS------ 206
            ++  RK ++    Y H + H  S  EY R   G+ +  YE P  K  E F+  S      
Sbjct: 1003 KVHSRKCLVDSREYTHSVIHTHSISEYQRDYTGEQL--YECP--KCGESFIHSSFLFEHQ 1058

Query: 207  -----------KSLSDALISLQMVYPRRNLSADQ 229
                       K   D  I+L  + PRRN +A++
Sbjct: 1059 RIHEQDQLYSMKGCDDGFIALLPMKPRRNRAAER 1092


>gi|226053169 paternally expressed 3 isoform 1 [Homo sapiens]
          Length = 1588

 Score = 30.4 bits (67), Expect = 10.0
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 23/94 (24%)

Query: 155  RIEERKAIIGLYNYAHEMTHGASDREYPR--LGQMIVDYENPLKKMMEEFVPHS------ 206
            ++  RK ++    Y H + H  S  EY R   G+ +  YE P  K  E F+  S      
Sbjct: 1127 KVHSRKCLVDSREYTHSVIHTHSISEYQRDYTGEQL--YECP--KCGESFIHSSFLFEHQ 1182

Query: 207  -----------KSLSDALISLQMVYPRRNLSADQ 229
                       K   D  I+L  + PRRN +A++
Sbjct: 1183 RIHEQDQLYSMKGCDDGFIALLPMKPRRNRAAER 1216


>gi|226053148 paternally expressed 3 isoform 2 [Homo sapiens]
          Length = 1462

 Score = 30.4 bits (67), Expect = 10.0
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 23/94 (24%)

Query: 155  RIEERKAIIGLYNYAHEMTHGASDREYPR--LGQMIVDYENPLKKMMEEFVPHS------ 206
            ++  RK ++    Y H + H  S  EY R   G+ +  YE P  K  E F+  S      
Sbjct: 1001 KVHSRKCLVDSREYTHSVIHTHSISEYQRDYTGEQL--YECP--KCGESFIHSSFLFEHQ 1056

Query: 207  -----------KSLSDALISLQMVYPRRNLSADQ 229
                       K   D  I+L  + PRRN +A++
Sbjct: 1057 RIHEQDQLYSMKGCDDGFIALLPMKPRRNRAAER 1090


>gi|226053126 paternally expressed 3 isoform 1 [Homo sapiens]
          Length = 1588

 Score = 30.4 bits (67), Expect = 10.0
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 23/94 (24%)

Query: 155  RIEERKAIIGLYNYAHEMTHGASDREYPR--LGQMIVDYENPLKKMMEEFVPHS------ 206
            ++  RK ++    Y H + H  S  EY R   G+ +  YE P  K  E F+  S      
Sbjct: 1127 KVHSRKCLVDSREYTHSVIHTHSISEYQRDYTGEQL--YECP--KCGESFIHSSFLFEHQ 1182

Query: 207  -----------KSLSDALISLQMVYPRRNLSADQ 229
                       K   D  I+L  + PRRN +A++
Sbjct: 1183 RIHEQDQLYSMKGCDDGFIALLPMKPRRNRAAER 1216


>gi|33354285 paternally expressed 3 isoform 1 [Homo sapiens]
          Length = 1588

 Score = 30.4 bits (67), Expect = 10.0
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 23/94 (24%)

Query: 155  RIEERKAIIGLYNYAHEMTHGASDREYPR--LGQMIVDYENPLKKMMEEFVPHS------ 206
            ++  RK ++    Y H + H  S  EY R   G+ +  YE P  K  E F+  S      
Sbjct: 1127 KVHSRKCLVDSREYTHSVIHTHSISEYQRDYTGEQL--YECP--KCGESFIHSSFLFEHQ 1182

Query: 207  -----------KSLSDALISLQMVYPRRNLSADQ 229
                       K   D  I+L  + PRRN +A++
Sbjct: 1183 RIHEQDQLYSMKGCDDGFIALLPMKPRRNRAAER 1216


>gi|44888835 ATPase, class I, type 8B, member 3 [Homo sapiens]
          Length = 1300

 Score = 30.4 bits (67), Expect = 10.0
 Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 6/70 (8%)

Query: 571 YSIAFPLLCTHFMSCTHELCPEERHHIGDRSLS--LCNMFLDEMAKQARNLITDICTEQ- 627
           +S++ P++C  F+  T +L  +   H  DR+++   C + + +  KQ +    D+C    
Sbjct: 183 FSLSTPMVCLLFIRATRDLVDDMGRHKSDRAINNRPCQILMGKSFKQKK--WQDLCVGDV 240

Query: 628 -CTLSDQLLP 636
            C   D ++P
Sbjct: 241 VCLRKDNIVP 250


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.133    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,137,053
Number of Sequences: 37866
Number of extensions: 1488778
Number of successful extensions: 4107
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 4099
Number of HSP's gapped (non-prelim): 15
length of query: 1134
length of database: 18,247,518
effective HSP length: 113
effective length of query: 1021
effective length of database: 13,968,660
effective search space: 14262001860
effective search space used: 14262001860
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.