Search of human proteins with 45504357

Search of human proteins with 45504357

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|45504357 surfactant associated protein G precursor [Homo
sapiens]
         (78 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|45504357 surfactant associated protein G precursor [Homo sapi...   158   1e-39
gi|7706683 Rh family, C glycoprotein [Homo sapiens]                    32   0.11 
gi|193082993 GTP binding protein 3 (mitochondrial) isoform III [...    32   0.14 
gi|193082991 GTP binding protein 3 (mitochondrial) isoform V [Ho...    32   0.14 
gi|193082988 GTP binding protein 3 (mitochondrial) isoform IV [H...    32   0.14 
gi|126116565 MYC binding protein 2 [Homo sapiens]                      28   1.6  
gi|23463303 purinergic receptor P2Y11 [Homo sapiens]                   28   1.6  
gi|99028871 PPAN-P2RY11 protein [Homo sapiens]                         28   1.6  
gi|169205072 PREDICTED: hypothetical protein [Homo sapiens]            26   7.9  
gi|113424011 PREDICTED: hypothetical protein [Homo sapiens]            26   7.9  
gi|239744776 PREDICTED: hypothetical protein [Homo sapiens]            26   7.9  

>gi|45504357 surfactant associated protein G precursor [Homo
          sapiens]
          Length = 78

 Score =  158 bits (399), Expect = 1e-39
 Identities = 78/78 (100%), Positives = 78/78 (100%)

Query: 1  MGSGLPLVLLLTLLGSSHGTGPGMTLQLKLKESFLTNSSYESSFLELLEKLCLLLHLPSG 60
          MGSGLPLVLLLTLLGSSHGTGPGMTLQLKLKESFLTNSSYESSFLELLEKLCLLLHLPSG
Sbjct: 1  MGSGLPLVLLLTLLGSSHGTGPGMTLQLKLKESFLTNSSYESSFLELLEKLCLLLHLPSG 60

Query: 61 TSVTLHHARSQHHVVCNT 78
          TSVTLHHARSQHHVVCNT
Sbjct: 61 TSVTLHHARSQHHVVCNT 78


>gi|7706683 Rh family, C glycoprotein [Homo sapiens]
          Length = 479

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 37  NSSYESSFLELLEKLCLLLHLPSGTSVTLHHARSQHHVVCNT 78
           NS Y+S    ++  L L ++ PS  S   +H  SQH    NT
Sbjct: 212 NSVYQSDLFAMIGTLFLWMYWPSFNSAISYHGDSQHRAAINT 253


>gi|193082993 GTP binding protein 3 (mitochondrial) isoform III
           [Homo sapiens]
          Length = 471

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 25/70 (35%), Positives = 31/70 (44%)

Query: 5   LPLVLLLTLLGSSHGTGPGMTLQLKLKESFLTNSSYESSFLELLEKLCLLLHLPSGTSVT 64
           L LVL  + L S  G GPG  L   L  S LT    +     L ++L  +   PS     
Sbjct: 348 LLLVLNKSDLLSPEGPGPGPDLPPHLLLSCLTGEGLDGLLEALRKELAAVCGDPSTDPPL 407

Query: 65  LHHARSQHHV 74
           L  AR QHH+
Sbjct: 408 LTRARHQHHL 417


>gi|193082991 GTP binding protein 3 (mitochondrial) isoform V [Homo
           sapiens]
          Length = 492

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 25/70 (35%), Positives = 31/70 (44%)

Query: 5   LPLVLLLTLLGSSHGTGPGMTLQLKLKESFLTNSSYESSFLELLEKLCLLLHLPSGTSVT 64
           L LVL  + L S  G GPG  L   L  S LT    +     L ++L  +   PS     
Sbjct: 369 LLLVLNKSDLLSPEGPGPGPDLPPHLLLSCLTGEGLDGLLEALRKELAAVCGDPSTDPPL 428

Query: 65  LHHARSQHHV 74
           L  AR QHH+
Sbjct: 429 LTRARHQHHL 438


>gi|193082988 GTP binding protein 3 (mitochondrial) isoform IV [Homo
           sapiens]
          Length = 524

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 25/70 (35%), Positives = 31/70 (44%)

Query: 5   LPLVLLLTLLGSSHGTGPGMTLQLKLKESFLTNSSYESSFLELLEKLCLLLHLPSGTSVT 64
           L LVL  + L S  G GPG  L   L  S LT    +     L ++L  +   PS     
Sbjct: 401 LLLVLNKSDLLSPEGPGPGPDLPPHLLLSCLTGEGLDGLLEALRKELAAVCGDPSTDPPL 460

Query: 65  LHHARSQHHV 74
           L  AR QHH+
Sbjct: 461 LTRARHQHHL 470


>gi|126116565 MYC binding protein 2 [Homo sapiens]
          Length = 4640

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 15/42 (35%), Positives = 24/42 (57%)

Query: 37   NSSYESSFLELLEKLCLLLHLPSGTSVTLHHARSQHHVVCNT 78
            N S  +SF E+LEK+ +++ LP   S+   +     H+V NT
Sbjct: 1613 NISGMTSFREVLEKMLVIVVLPVRNSLRRENELFSSHLVSNT 1654


>gi|23463303 purinergic receptor P2Y11 [Homo sapiens]
          Length = 374

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 6/51 (11%)

Query: 1   MGSGLPLVLLLT---LLGSSHGTGPGMTLQLKLKESFLTNSS---YESSFL 45
           +G GLPL+L L     LG +    PGMT+  KL+ + L  S    Y SS++
Sbjct: 212 LGCGLPLLLTLAAYGALGRAVLRSPGMTVAEKLRVAALVASGVALYASSYV 262


>gi|99028871 PPAN-P2RY11 protein [Homo sapiens]
          Length = 794

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 6/51 (11%)

Query: 1   MGSGLPLVLLLT---LLGSSHGTGPGMTLQLKLKESFLTNSS---YESSFL 45
           +G GLPL+L L     LG +    PGMT+  KL+ + L  S    Y SS++
Sbjct: 632 LGCGLPLLLTLAAYGALGRAVLRSPGMTVAEKLRVAALVASGVALYASSYV 682


>gi|169205072 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 159

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 15/27 (55%), Positives = 16/27 (59%)

Query: 5  LPLVLLLTLLGSSHGTGPGMTLQLKLK 31
          L L+LLL LLGS  G GP   L L  K
Sbjct: 9  LLLLLLLLLLGSMAGYGPQKKLNLSHK 35


>gi|113424011 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 159

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 15/27 (55%), Positives = 16/27 (59%)

Query: 5  LPLVLLLTLLGSSHGTGPGMTLQLKLK 31
          L L+LLL LLGS  G GP   L L  K
Sbjct: 9  LLLLLLLLLLGSMAGYGPQKKLNLSHK 35


>gi|239744776 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 159

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 15/27 (55%), Positives = 16/27 (59%)

Query: 5  LPLVLLLTLLGSSHGTGPGMTLQLKLK 31
          L L+LLL LLGS  G GP   L L  K
Sbjct: 9  LLLLLLLLLLGSMAGYGPQKKLNLSHK 35


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.134    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,268,556
Number of Sequences: 37866
Number of extensions: 118856
Number of successful extensions: 348
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 339
Number of HSP's gapped (non-prelim): 11
length of query: 78
length of database: 18,247,518
effective HSP length: 50
effective length of query: 28
effective length of database: 16,354,218
effective search space: 457918104
effective search space used: 457918104
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.