Search of human proteins with 45439306

Search of human proteins with 45439306

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|45439306 aspartyl-tRNA synthetase [Homo sapiens]
         (501 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|45439306 aspartyl-tRNA synthetase [Homo sapiens]                  1000   0.0  
gi|4758762 asparaginyl-tRNA synthetase [Homo sapiens]                 149   4e-36
gi|226491502 asparaginyl-tRNA synthetase 2, mitochondrial [Homo ...   121   1e-27
gi|194272210 lysyl-tRNA synthetase isoform 1 [Homo sapiens]            81   3e-15
gi|5031815 lysyl-tRNA synthetase isoform 2 [Homo sapiens]              81   3e-15
gi|40789249 aspartyl-tRNA synthetase 2, mitochondrial [Homo sapi...    77   5e-14
gi|7661700 sorbin and SH3 domain containing 1 isoform 2 [Homo sa...    35   0.21 
gi|78000160 sorbin and SH3 domain containing 1 isoform 1 [Homo s...    35   0.21 
gi|58532584 C1GALT1-specific chaperone 1 [Homo sapiens]                34   0.35 
gi|23097329 C1GALT1-specific chaperone 1 [Homo sapiens]                34   0.35 
gi|193788697 hypothetical protein LOC140688 [Homo sapiens]             33   0.79 
gi|169217835 PREDICTED: similar to hCG2038921 [Homo sapiens]           32   1.3  
gi|169207803 PREDICTED: similar to hCG2038921 [Homo sapiens]           32   1.3  
gi|148235600 nucleolar protein 4 [Homo sapiens]                        32   1.3  
gi|239750758 PREDICTED: hypothetical protein XP_002347493 [Homo ...    30   3.9  
gi|67782321 spectrin beta isoform a [Homo sapiens]                     29   8.7  
gi|67782319 spectrin beta isoform b [Homo sapiens]                     29   8.7  
gi|19923403 exosome component 2 [Homo sapiens]                         29   8.7  

>gi|45439306 aspartyl-tRNA synthetase [Homo sapiens]
          Length = 501

 Score = 1000 bits (2586), Expect = 0.0
 Identities = 501/501 (100%), Positives = 501/501 (100%)

Query: 1   MPSASASRKSQEKPREIMDAAEDYAKERYGISSMIQSQEKPDRVLVRVRDLTIQKADEVV 60
           MPSASASRKSQEKPREIMDAAEDYAKERYGISSMIQSQEKPDRVLVRVRDLTIQKADEVV
Sbjct: 1   MPSASASRKSQEKPREIMDAAEDYAKERYGISSMIQSQEKPDRVLVRVRDLTIQKADEVV 60

Query: 61  WVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANINKESIVDVEGVV 120
           WVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANINKESIVDVEGVV
Sbjct: 61  WVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANINKESIVDVEGVV 120

Query: 121 RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGEEEGRATVNQDTRL 180
           RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGEEEGRATVNQDTRL
Sbjct: 121 RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGEEEGRATVNQDTRL 180

Query: 181 DNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAASEGGANVFTVSYF 240
           DNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAASEGGANVFTVSYF
Sbjct: 181 DNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAASEGGANVFTVSYF 240

Query: 241 KNNAYLAQSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYH 300
           KNNAYLAQSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYH
Sbjct: 241 KNNAYLAQSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYH 300

Query: 301 EVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLRLEYCEALAMLREAGV 360
           EVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLRLEYCEALAMLREAGV
Sbjct: 301 EVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLRLEYCEALAMLREAGV 360

Query: 361 EMGDEDDLSTPNEKLLGHLVKEKYDTDFYILDKYPLAVRPFYTMPDPRNPKQSNSYDMFM 420
           EMGDEDDLSTPNEKLLGHLVKEKYDTDFYILDKYPLAVRPFYTMPDPRNPKQSNSYDMFM
Sbjct: 361 EMGDEDDLSTPNEKLLGHLVKEKYDTDFYILDKYPLAVRPFYTMPDPRNPKQSNSYDMFM 420

Query: 421 RGEEILSGAQRIHDPQLLTERALHHGIDLEKIKAYIDSFRFGAPPHAGGGIGLERVTMLF 480
           RGEEILSGAQRIHDPQLLTERALHHGIDLEKIKAYIDSFRFGAPPHAGGGIGLERVTMLF
Sbjct: 421 RGEEILSGAQRIHDPQLLTERALHHGIDLEKIKAYIDSFRFGAPPHAGGGIGLERVTMLF 480

Query: 481 LGLHNVRQTSMFPRDPKRLTP 501
           LGLHNVRQTSMFPRDPKRLTP
Sbjct: 481 LGLHNVRQTSMFPRDPKRLTP 501


>gi|4758762 asparaginyl-tRNA synthetase [Homo sapiens]
          Length = 548

 Score =  149 bits (377), Expect = 4e-36
 Identities = 97/335 (28%), Positives = 163/335 (48%), Gaps = 23/335 (6%)

Query: 177 DTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAASEGGANVFT 236
           D +L+NR + +R      + + +S +   FR+   ++G+ E+  P ++    EGGA +F 
Sbjct: 227 DVQLNNRHMMIRGENMSKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFK 286

Query: 237 VSYFKNNAYLAQSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTEFVGLDIE---M 293
           + YF   A+L QS QLY + C+ A    VF I   +RAE S T RHL E+  ++ E   +
Sbjct: 287 LDYFGEEAFLTQSSQLYLETCLPA-LGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFL 345

Query: 294 AFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLRLEYCEALA 353
            F+   + + + + D + +I K        E+   N Q P  PFK      R+ Y +A+ 
Sbjct: 346 TFDDLLNRLEDLVCDVVDRILKSPAGSIVHELNP-NFQPPKRPFK------RMNYSDAIV 398

Query: 354 MLREAGVEMGD------EDDLSTPNEKLLGHLVKEKYDTDFYILDKYPLAVRPFYTMPDP 407
            L+E  V+  D       +D+    E+L+   + E       +L ++P+ ++ FY    P
Sbjct: 399 WLKEHDVKKEDGTFYEFGEDIPEAPERLMTDTINEP-----ILLCRFPVEIKSFYMQRCP 453

Query: 408 RNPKQSNSYDMFMRG-EEILSGAQRIHDPQLLTERALHHGIDLEKIKAYIDSFRFGAPPH 466
            + + + S D+ M    EI+ G+ RI D + +       GID      Y D  ++G  PH
Sbjct: 454 EDSRLTESVDVLMPNVGEIVGGSMRIFDSEEILAGYKREGIDPTPYYWYTDQRKYGTCPH 513

Query: 467 AGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 501
            G G+GLER     L  +++R   ++PR  +R TP
Sbjct: 514 GGYGLGLERFLTWILNRYHIRDVCLYPRFVQRCTP 548


>gi|226491502 asparaginyl-tRNA synthetase 2, mitochondrial [Homo
           sapiens]
          Length = 477

 Score =  121 bits (304), Expect = 1e-27
 Identities = 129/484 (26%), Positives = 218/484 (45%), Gaps = 57/484 (11%)

Query: 38  QEKPDRVLVRVRD-LTIQKAD-EVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGD 95
           + KP   L  VRD L  Q A  E + ++  + + R++ +  FL +     ++++L  V D
Sbjct: 21  KHKPSAKL-SVRDALGAQNASGERIKIQGWIRSVRSQKEVLFLHVNDGS-SLESLQVVAD 78

Query: 96  HASKQMVKFAANINKESIVDVEGVVRKVNQKIGSCTQQDVELHVQKIYVISLAEPR-LPL 154
                    +  +N  S V+V+G + K   K     +Q+VEL  +KI VI   + +  P+
Sbjct: 79  SGLD-----SRELNFGSSVEVQGQLIKSPSK-----RQNVELKAEKIKVIGNCDAKDFPI 128

Query: 155 QLDDAVRPEAEGEEEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKG 214
           +           E      + Q           RT+   ++ R++S           + G
Sbjct: 129 KYK---------ERHPLEYLRQYPHFR-----CRTNVLGSILRIRSEATAAIHSFFKDSG 174

Query: 215 FVEIQTPKIISAASEGGANVFTV-----------SYFKNNAYLAQSPQLYKQMCICADFE 263
           FV I TP I S  SEG   +F +           ++F   A+L  S QL+ ++   A F 
Sbjct: 175 FVHIHTPIITSNDSEGAGELFQLEPSGKLKVPEENFFNVPAFLTVSGQLHLEVMSGA-FT 233

Query: 264 KVFSIGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQT 323
           +VF+ GP FRAE+S + RHL EF  ++ E++F     ++M+ I +        +  +   
Sbjct: 234 QVFTFGPTFRAENSQSRRHLAEFYMIEAEISFVDSLQDLMQVIEELFKATTMMVLSKCPE 293

Query: 324 EIQTVNKQFPCEPFKFLEPTLR-----LEYCEALAMLREAGVEMGDED----DLSTPNEK 374
           +++  +K         LE  L+     + Y EA+ +L++A            DL T +EK
Sbjct: 294 DVELCHKFIAPGQKDRLEHMLKNNFLIISYTEAVEILKQASQNFTFTPEWGADLRTEHEK 353

Query: 375 LLGHLVKEKYDTDFYILDKYPLAVRPFYTMPDPRNPKQS-NSYDMFMRGE-EILSGAQRI 432
              +LVK   +   ++++ YPL ++PFY   +   P+ +  + D+ + G  E+  G  R 
Sbjct: 354 ---YLVKHCGNIPVFVIN-YPLTLKPFYMRDNEDGPQHTVAAVDLLVPGVGELFGGGLRE 409

Query: 433 HDPQLLTERALHHGIDLEKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMF 492
                L ER    G+  E  + Y+D  RFG+ PH G G+G ER     LG+ N++    F
Sbjct: 410 ERYHFLEERLARSGLT-EVYQWYLDLRRFGSVPHGGFGMGFERYLQCILGVDNIKDVIPF 468

Query: 493 PRDP 496
           PR P
Sbjct: 469 PRFP 472


>gi|194272210 lysyl-tRNA synthetase isoform 1 [Homo sapiens]
          Length = 625

 Score = 80.9 bits (198), Expect = 3e-15
 Identities = 106/475 (22%), Positives = 193/475 (40%), Gaps = 64/475 (13%)

Query: 57  DEVVWVRARVHTSRAKG-KQCFLVLRQQQFNVQALVAVGDHASKQ-MVKFAANINKESIV 114
           D  + V  R+H  RA G K  F  LR +   +Q +    ++ S++  +     + +  I+
Sbjct: 151 DITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDII 210

Query: 115 DVEGVVRKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGEEEGRATV 174
            V+G   K  +   S    ++ L    ++++    P L   L D                
Sbjct: 211 GVQGNPGKTKKGELSIIPYEITLLSPCLHML----PHLHFGLKD---------------- 250

Query: 175 NQDTRLDNRVIDLRTSTS-QAVFRLQSGICHLFRETLINKGFVEIQTPKIISAASEGGAN 233
            ++TR   R +DL  +   +  F ++S I    R  L   GF+EI+TP +        A 
Sbjct: 251 -KETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAK 309

Query: 234 VFTVSYFKN---NAYLAQSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTEFVGLD 290
            F ++Y      N Y+  +P+LY +M +    ++V+ IG  FR E  +   H  EF   +
Sbjct: 310 PF-ITYHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDL-THNPEFTTCE 367

Query: 291 IEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLRLEYCE 350
             MA+   YH++ME     +  + K +   ++        +       F  P  R+   E
Sbjct: 368 FYMAYA-DYHDLMEITEKMVSGMVKHITGSYKVTYHPDGPEGQAYDVDFTPPFRRINMVE 426

Query: 351 ----ALAM-LREAGVEMGDE-----DDLSTPN--------------EKLLGHLVKEKYDT 386
               AL M L E  +   +E     DD+                  +KL+G  ++     
Sbjct: 427 ELEKALGMKLPETNLFETEETRKILDDICVAKAVECPPPRTTARLLDKLVGEFLEVTCIN 486

Query: 387 DFYILDKYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDP----QLLTERA 442
             +I D +P  + P       +    +  +++F+  +EI +    ++DP    QL  E+A
Sbjct: 487 PTFICD-HPQIMSPLAKWHRSKEGL-TERFELFVMKKEICNAYTELNDPMRQRQLFEEQA 544

Query: 443 LHHGIDLEKIKAYIDSF----RFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFP 493
                  ++     ++F     +G PP AG G+G++RV M     +N+++  +FP
Sbjct: 545 KAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFP 599


>gi|5031815 lysyl-tRNA synthetase isoform 2 [Homo sapiens]
          Length = 597

 Score = 80.9 bits (198), Expect = 3e-15
 Identities = 106/475 (22%), Positives = 193/475 (40%), Gaps = 64/475 (13%)

Query: 57  DEVVWVRARVHTSRAKG-KQCFLVLRQQQFNVQALVAVGDHASKQ-MVKFAANINKESIV 114
           D  + V  R+H  RA G K  F  LR +   +Q +    ++ S++  +     + +  I+
Sbjct: 123 DITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDII 182

Query: 115 DVEGVVRKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGEEEGRATV 174
            V+G   K  +   S    ++ L    ++++    P L   L D                
Sbjct: 183 GVQGNPGKTKKGELSIIPYEITLLSPCLHML----PHLHFGLKD---------------- 222

Query: 175 NQDTRLDNRVIDLRTSTS-QAVFRLQSGICHLFRETLINKGFVEIQTPKIISAASEGGAN 233
            ++TR   R +DL  +   +  F ++S I    R  L   GF+EI+TP +        A 
Sbjct: 223 -KETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAK 281

Query: 234 VFTVSYFKN---NAYLAQSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTEFVGLD 290
            F ++Y      N Y+  +P+LY +M +    ++V+ IG  FR E  +   H  EF   +
Sbjct: 282 PF-ITYHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDL-THNPEFTTCE 339

Query: 291 IEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLRLEYCE 350
             MA+   YH++ME     +  + K +   ++        +       F  P  R+   E
Sbjct: 340 FYMAYA-DYHDLMEITEKMVSGMVKHITGSYKVTYHPDGPEGQAYDVDFTPPFRRINMVE 398

Query: 351 ----ALAM-LREAGVEMGDE-----DDLSTPN--------------EKLLGHLVKEKYDT 386
               AL M L E  +   +E     DD+                  +KL+G  ++     
Sbjct: 399 ELEKALGMKLPETNLFETEETRKILDDICVAKAVECPPPRTTARLLDKLVGEFLEVTCIN 458

Query: 387 DFYILDKYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDP----QLLTERA 442
             +I D +P  + P       +    +  +++F+  +EI +    ++DP    QL  E+A
Sbjct: 459 PTFICD-HPQIMSPLAKWHRSKEGL-TERFELFVMKKEICNAYTELNDPMRQRQLFEEQA 516

Query: 443 LHHGIDLEKIKAYIDSF----RFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFP 493
                  ++     ++F     +G PP AG G+G++RV M     +N+++  +FP
Sbjct: 517 KAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFP 571


>gi|40789249 aspartyl-tRNA synthetase 2, mitochondrial [Homo
           sapiens]
          Length = 645

 Score = 76.6 bits (187), Expect = 5e-14
 Identities = 66/224 (29%), Positives = 106/224 (47%), Gaps = 21/224 (9%)

Query: 77  FLVLRQQQFNVQALVAVGDHASKQMVKFAANINKESIVDVEGVV--RKVNQKIGSCTQQD 134
           FLVLR     VQ ++   D ++  + K       ES+V V G V  R   Q+       +
Sbjct: 80  FLVLRDFDGLVQVIIPQ-DESAASVKKILCEAPVESVVQVSGTVISRPAGQENPKMPTGE 138

Query: 135 VELHVQKIYVISLAEPRLPLQLDDAVRPEAEGEEEGRATVNQDTRLDNRVIDLRTSTSQA 194
           +E+ V+   +++  + +LP ++ + V+              +  RL  R +DLR+   Q 
Sbjct: 139 IEIKVKTAELLNACK-KLPFEIKNFVKK------------TEALRLQYRYLDLRSFQMQY 185

Query: 195 VFRLQSGICHLFRETLIN-KGFVEIQTPKIISAASEGGANVFTVSYFKNNAY--LAQSPQ 251
             RL+S +    RE L N  GFV+I+TP +    + GGA  F V   +   +  L QSPQ
Sbjct: 186 NLRLRSQMVMKMREYLCNLHGFVDIETPTLFKR-TPGGAKEFLVPSREPGKFYSLPQSPQ 244

Query: 252 LYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTEFVGLDIEMAF 295
            +KQ+ +    ++ F +   +R E S   R   EF  +DIEM+F
Sbjct: 245 QFKQLLMVGGLDRYFQVARCYRDEGSRPDRQ-PEFTQIDIEMSF 287



 Score = 53.1 bits (126), Expect = 6e-07
 Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 8/104 (7%)

Query: 394 YPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHHGI---DLE 450
           +P  +   YT P      +S  YD+ + G EI  G+ RIH+ +L  +R +   +   D++
Sbjct: 508 HPSDIHLLYTEP---KKARSQHYDLVLNGNEIGGGSIRIHNAEL--QRYILATLLKEDVK 562

Query: 451 KIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPR 494
            +   + +  +GAPPH G  +GL+R+  L  G  ++R    FP+
Sbjct: 563 MLSHLLQALDYGAPPHGGIALGLDRLICLVTGSPSIRDVIAFPK 606


>gi|7661700 sorbin and SH3 domain containing 1 isoform 2 [Homo
           sapiens]
          Length = 816

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 20/78 (25%), Positives = 43/78 (55%), Gaps = 6/78 (7%)

Query: 2   PSASASRKSQEKPR-----EIMDAAEDYAKERYGISSMIQSQEKPDRVLVRVRDLTIQKA 56
           PS+SAS K  E PR     + +++ E++ + R+    M  ++ K D     +++L +QK 
Sbjct: 540 PSSSASTKDSESPRHFIPADYLESTEEFIRRRHDDKEMRPARAKFDFKAQTLKELPLQKG 599

Query: 57  DEVVWVRARVHTSRAKGK 74
           D +V++  ++  +  +G+
Sbjct: 600 D-IVYIYKQIDQNWYEGE 616


>gi|78000160 sorbin and SH3 domain containing 1 isoform 1 [Homo
           sapiens]
          Length = 684

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 20/78 (25%), Positives = 43/78 (55%), Gaps = 6/78 (7%)

Query: 2   PSASASRKSQEKPR-----EIMDAAEDYAKERYGISSMIQSQEKPDRVLVRVRDLTIQKA 56
           PS+SAS K  E PR     + +++ E++ + R+    M  ++ K D     +++L +QK 
Sbjct: 408 PSSSASTKDSESPRHFIPADYLESTEEFIRRRHDDKEMRPARAKFDFKAQTLKELPLQKG 467

Query: 57  DEVVWVRARVHTSRAKGK 74
           D +V++  ++  +  +G+
Sbjct: 468 D-IVYIYKQIDQNWYEGE 484


>gi|58532584 C1GALT1-specific chaperone 1 [Homo sapiens]
          Length = 318

 Score = 33.9 bits (76), Expect = 0.35
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 5/65 (7%)

Query: 254 KQMCICADFEKVFSIGPVFRAEDSNTHRHL-TEFVGLDIEMAFNYHYHEVMEEIADTMVQ 312
           KQ+ +C  +  VF+      AED++      T+ VGL I+ A  YH ++V+E     M  
Sbjct: 221 KQLAVCLKYAGVFAEN----AEDADGKDVFNTKSVGLSIKEAMTYHPNQVVEGCCSDMAV 276

Query: 313 IFKGL 317
            F GL
Sbjct: 277 TFNGL 281


>gi|23097329 C1GALT1-specific chaperone 1 [Homo sapiens]
          Length = 318

 Score = 33.9 bits (76), Expect = 0.35
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 5/65 (7%)

Query: 254 KQMCICADFEKVFSIGPVFRAEDSNTHRHL-TEFVGLDIEMAFNYHYHEVMEEIADTMVQ 312
           KQ+ +C  +  VF+      AED++      T+ VGL I+ A  YH ++V+E     M  
Sbjct: 221 KQLAVCLKYAGVFAEN----AEDADGKDVFNTKSVGLSIKEAMTYHPNQVVEGCCSDMAV 276

Query: 313 IFKGL 317
            F GL
Sbjct: 277 TFNGL 281


>gi|193788697 hypothetical protein LOC140688 [Homo sapiens]
          Length = 436

 Score = 32.7 bits (73), Expect = 0.79
 Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 8/92 (8%)

Query: 275 EDSNTHRHLTEFVGLDIEM--AFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQF 332
           +D   +  + +  G+D E   AFN      ++E  D MV I K  +E+ Q  I++ ++QF
Sbjct: 168 DDHEDNDKMNDSEGMDPERLKAFNMFVRLFVDENLDRMVPISKQPKEKIQAIIESCSRQF 227

Query: 333 PCEPFKFLEPTLR--LEYCEALAMLREAGVEM 362
           P    +F E   +    Y ++   +++ G+EM
Sbjct: 228 P----EFQERARKRIRTYLKSCRRMKKNGMEM 255


>gi|169217835 PREDICTED: similar to hCG2038921 [Homo sapiens]
          Length = 120

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 21/109 (19%)

Query: 92  AVGDHASKQMVKFAANINKESIVDVEGVVRKVNQKIGSCTQQDVELH-VQKIYVISLAEP 150
           A G HA  Q+V+  A + K       G   K++ K+   T  D  +H VQ+        P
Sbjct: 14  ATGTHAEVQLVQSGAEVKK------PGATVKISCKVSGYTFTDYYMHWVQQ-------AP 60

Query: 151 RLPLQLDDAVRPEAEGEE------EGRATVNQDTRLDNRVIDLRTSTSQ 193
              L+    V PE +GE       +GR T+  DT  D   ++L +  S+
Sbjct: 61  GKGLEWMGLVDPE-DGETIYAEKFQGRVTITADTSTDTAYMELSSLRSE 108


>gi|169207803 PREDICTED: similar to hCG2038921 [Homo sapiens]
          Length = 120

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 21/109 (19%)

Query: 92  AVGDHASKQMVKFAANINKESIVDVEGVVRKVNQKIGSCTQQDVELH-VQKIYVISLAEP 150
           A G HA  Q+V+  A + K       G   K++ K+   T  D  +H VQ+        P
Sbjct: 14  ATGTHAEVQLVQSGAEVKK------PGATVKISCKVSGYTFTDYYMHWVQQ-------AP 60

Query: 151 RLPLQLDDAVRPEAEGEE------EGRATVNQDTRLDNRVIDLRTSTSQ 193
              L+    V PE +GE       +GR T+  DT  D   ++L +  S+
Sbjct: 61  GKGLEWMGLVDPE-DGETIYAEKFQGRVTITADTSTDTAYMELSSLRSE 108


>gi|148235600 nucleolar protein 4 [Homo sapiens]
          Length = 638

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 4/90 (4%)

Query: 275 EDSNTHRHLTEFVGLDIEM--AFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQF 332
           ED +    + E  G++ E   AFN      ++E  D MV I K  +E+ Q  I +  +QF
Sbjct: 389 EDHDDSEKVNETDGVEAERLKAFNMFVRLFVDENLDRMVPISKQPKEKIQAIIDSCRRQF 448

Query: 333 PCEPFKFLEPTLRLEYCEALAMLREAGVEM 362
           P E  +     +R  Y ++   ++ +G EM
Sbjct: 449 P-EYQERARKRIR-TYLKSCRRMKRSGFEM 476


>gi|239750758 PREDICTED: hypothetical protein XP_002347493 [Homo
           sapiens]
          Length = 120

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 19/108 (17%)

Query: 92  AVGDHASKQMVKFAANINKESIVDVEGVVRKVNQKIGSCTQQDVELHVQKIYVISLAEPR 151
           A G HA  Q+V+  A + K       G   KV+ K+   T  ++ +H  +        P 
Sbjct: 14  ATGTHAQVQLVQSGAEVKKP------GASVKVSCKVSGYTLTELSMHWVR------QAPG 61

Query: 152 LPLQLDDAVRPEAEGEE------EGRATVNQDTRLDNRVIDLRTSTSQ 193
             L+      PE +GE       +GR T+ +DT  D   ++L +  S+
Sbjct: 62  KGLEWMGGFDPE-DGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSE 108


>gi|67782321 spectrin beta isoform a [Homo sapiens]
          Length = 2328

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 4/67 (5%)

Query: 261  DFEKVFSIGPVFRAEDSNTHRHLTEFVGLDIEMAFNYH-YHEVME---EIADTMVQIFKG 316
            D  + F  G          HR L E VGLD   A ++H  H   E    +    VQ F+ 
Sbjct: 1798 DLHRYFYTGAEILGLIDEKHRELPEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQD 1857

Query: 317  LQERFQT 323
            +  R QT
Sbjct: 1858 VATRLQT 1864


>gi|67782319 spectrin beta isoform b [Homo sapiens]
          Length = 2137

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 4/67 (5%)

Query: 261  DFEKVFSIGPVFRAEDSNTHRHLTEFVGLDIEMAFNYH-YHEVME---EIADTMVQIFKG 316
            D  + F  G          HR L E VGLD   A ++H  H   E    +    VQ F+ 
Sbjct: 1798 DLHRYFYTGAEILGLIDEKHRELPEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQD 1857

Query: 317  LQERFQT 323
            +  R QT
Sbjct: 1858 VATRLQT 1864


>gi|19923403 exosome component 2 [Homo sapiens]
          Length = 293

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)

Query: 95  DHASKQMVKFAANINKESIVDVEGVVRKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPL 154
           +H  ++   F AN+   S+ D E + R  N  I   TQ+ +      +Y     E  LP 
Sbjct: 210 EHKEEEAGGFIANLEPVSLADREVISRLRNCIISLVTQRMMLYDTSILYCY---EASLPH 266

Query: 155 QLDDAVRPE 163
           Q+ D ++PE
Sbjct: 267 QIKDILKPE 275


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.135    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,781,661
Number of Sequences: 37866
Number of extensions: 753927
Number of successful extensions: 1751
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1727
Number of HSP's gapped (non-prelim): 21
length of query: 501
length of database: 18,247,518
effective HSP length: 106
effective length of query: 395
effective length of database: 14,233,722
effective search space: 5622320190
effective search space used: 5622320190
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.