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Search of human proteins with 4507709
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4507709 tissue specific transplantation antigen P35B [Homo
sapiens]
(321 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4507709 tissue specific transplantation antigen P35B [Homo sa... 660 0.0
gi|42516563 UDP-glucuronate decarboxylase 1 [Homo sapiens] 73 3e-13
gi|7657641 TDP-glucose 4,6-dehydratase [Homo sapiens] 58 1e-08
gi|56118217 UDP-galactose-4-epimerase [Homo sapiens] 40 0.003
gi|56237023 UDP-galactose-4-epimerase [Homo sapiens] 40 0.003
gi|189083684 UDP-galactose-4-epimerase [Homo sapiens] 40 0.003
gi|226371723 FCH domain only 2 isoform a [Homo sapiens] 30 2.2
gi|33519455 methionine adenosyltransferase II, beta isoform 2 [H... 30 2.9
gi|11034825 methionine adenosyltransferase II, beta isoform 1 [H... 30 2.9
gi|14150045 calcium/calmodulin-dependent protein kinase 1 alpha ... 30 3.7
gi|148806859 calcium/calmodulin-dependent protein kinase 1 alpha... 30 3.7
gi|27437011 calcium/calmodulin-dependent protein kinase 1 alpha ... 30 3.7
gi|14149688 hypothetical protein LOC25912 isoform 1 [Homo sapiens] 29 6.4
gi|41281688 hypothetical protein LOC25912 isoform 2 [Homo sapiens] 29 6.4
gi|148833486 hypothetical protein LOC25912 isoform 3 [Homo sapiens] 29 6.4
gi|57529737 PDZ domain containing ring finger 3 [Homo sapiens] 29 6.4
>gi|4507709 tissue specific transplantation antigen P35B [Homo
sapiens]
Length = 321
Score = 660 bits (1704), Expect = 0.0
Identities = 321/321 (100%), Positives = 321/321 (100%)
Query: 1 MGEPQGSMRILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTRALFEK 60
MGEPQGSMRILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTRALFEK
Sbjct: 1 MGEPQGSMRILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTRALFEK 60
Query: 61 VQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPD 120
VQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPD
Sbjct: 61 VQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPD 120
Query: 121 KTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNF 180
KTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNF
Sbjct: 121 KTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNF 180
Query: 181 NIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNEVEPI 240
NIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNEVEPI
Sbjct: 181 NIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNEVEPI 240
Query: 241 ILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNSKLRTYLPDFRFTP 300
ILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNSKLRTYLPDFRFTP
Sbjct: 241 ILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNSKLRTYLPDFRFTP 300
Query: 301 FKQAVKETCAWFTDNYEQARK 321
FKQAVKETCAWFTDNYEQARK
Sbjct: 301 FKQAVKETCAWFTDNYEQARK 321
>gi|42516563 UDP-glucuronate decarboxylase 1 [Homo sapiens]
Length = 420
Score = 73.2 bits (178), Expect = 3e-13
Identities = 82/321 (25%), Positives = 131/321 (40%), Gaps = 26/321 (8%)
Query: 9 RILVTGGSGLVGKAI-QKVVADGAGLPGEDWVFVSSK----------DADLTDTAQTRAL 57
RIL+TGG+G VG + K++ DG + D F K + +L + L
Sbjct: 90 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 149
Query: 58 FEKVQPTHVIHLAAMVGGLFRNIKYN-LDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTC 116
+ +V + HLA+ N YN + + N N+L A VGAR +++ S
Sbjct: 150 YIEVD--QIYHLASPASP--PNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSE- 204
Query: 117 IFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGP 176
++ D +P E + P Y KR+ + AY +Q G N FGP
Sbjct: 205 VYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGP 264
Query: 177 HDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNE 236
+ N DG V+ I L G LTV+G+G+ R F Y DL + L N
Sbjct: 265 RMHMN--DGRVVSNFI----LQALQGEPLTVYGSGSQTRAFQYVSDLVNGLV-ALMNSNV 317
Query: 237 VEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNSKLRTYLPDF 296
P+ ++G +E +I E A+ + + E+ F + D K+ K + L
Sbjct: 318 SSPV--NLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWE 375
Query: 297 RFTPFKQAVKETCAWFTDNYE 317
P ++ + + +F E
Sbjct: 376 PVVPLEEGLNKAIHYFRKELE 396
>gi|7657641 TDP-glucose 4,6-dehydratase [Homo sapiens]
Length = 350
Score = 57.8 bits (138), Expect = 1e-08
Identities = 73/344 (21%), Positives = 142/344 (41%), Gaps = 48/344 (13%)
Query: 2 GEPQG-SMRILVTGGSGLVGK-AIQKVVADGAG-----LPGEDWVF-------VSSKD-- 45
G P G + R+LVTGG+G + I +V D L D+ +S+K
Sbjct: 11 GLPGGFAKRVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNY 70
Query: 46 ----ADLTDTAQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSA 101
D+ D+ + LFE + V+H AA ++ +F NV+ ++ +A
Sbjct: 71 KFIQGDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRA-FEFTYVNVYGTHVLVSAA 129
Query: 102 FEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQY 161
E K + + ++ DE+ P Y+ +K + ++Y++QY
Sbjct: 130 HEARVEKFIYVSTDEVYGGSLDKEFDESS-----PKQPTNPYASSKAAAECFVQSYWEQY 184
Query: 162 GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSL 221
+NV+GPH V+P I + + + G+G R F+Y+
Sbjct: 185 KFPVVITRSSNVYGPHQY----PEKVIPKFISLLQHNRKC----CIHGSGLQTRNFLYAT 236
Query: 222 DLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVE---------AMDFHGEVTFD 272
D+ + F+ VL++ E I ++G E+S+ + A+ +++ M+ + D
Sbjct: 237 DVVEAFLTVLKKGKPGE--IYNIGTNFEMSVVQLAKELIQLIKETNSESEMENWVDYVND 294
Query: 273 TTKSDGQFKKTASNSKLRTYLPDFRFTPFKQAVKETCAWFTDNY 316
+D ++ + + P P+K+ +K+T W+ +N+
Sbjct: 295 RPTNDMRYPMKSEKIHGLGWRPK---VPWKEGIKKTIEWYRENF 335
>gi|56118217 UDP-galactose-4-epimerase [Homo sapiens]
Length = 348
Score = 40.0 bits (92), Expect = 0.003
Identities = 65/263 (24%), Positives = 104/263 (39%), Gaps = 41/263 (15%)
Query: 9 RILVTGGSGLVGK---------AIQKVVAD--------GAGLPGE-------DWVFVSSK 44
++LVTGG+G +G VV D G LP V +
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE 63
Query: 45 DADLTDTAQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEV 104
+ D+ D + LF+K VIH A + + +++ LD++R N+ +L
Sbjct: 64 EMDILDQGALQRLFKKYSFMAVIHFAGL-KAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 105 GARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCT 164
G + +V S ++ + P+DE P Y +K I+ R Q T
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEA----HPTGGCTNPYGKSKFFIEEMIRDLCQA-DKT 177
Query: 165 FTAVIPT--NVFGPHDNFNI-EDGHVLPG--LIHKVHLAKSSGSALTVWGT------GNP 213
+ AV+ N G H + I ED +P + + +A AL V+G G
Sbjct: 178 WNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTG 237
Query: 214 RRQFIYSLDLAQLFIWVLREYNE 236
R +I+ +DLA+ I LR+ E
Sbjct: 238 VRDYIHVVDLAKGHIAALRKLKE 260
>gi|56237023 UDP-galactose-4-epimerase [Homo sapiens]
Length = 348
Score = 40.0 bits (92), Expect = 0.003
Identities = 65/263 (24%), Positives = 104/263 (39%), Gaps = 41/263 (15%)
Query: 9 RILVTGGSGLVGK---------AIQKVVAD--------GAGLPGE-------DWVFVSSK 44
++LVTGG+G +G VV D G LP V +
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE 63
Query: 45 DADLTDTAQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEV 104
+ D+ D + LF+K VIH A + + +++ LD++R N+ +L
Sbjct: 64 EMDILDQGALQRLFKKYSFMAVIHFAGL-KAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 105 GARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCT 164
G + +V S ++ + P+DE P Y +K I+ R Q T
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEA----HPTGGCTNPYGKSKFFIEEMIRDLCQA-DKT 177
Query: 165 FTAVIPT--NVFGPHDNFNI-EDGHVLPG--LIHKVHLAKSSGSALTVWGT------GNP 213
+ AV+ N G H + I ED +P + + +A AL V+G G
Sbjct: 178 WNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTG 237
Query: 214 RRQFIYSLDLAQLFIWVLREYNE 236
R +I+ +DLA+ I LR+ E
Sbjct: 238 VRDYIHVVDLAKGHIAALRKLKE 260
>gi|189083684 UDP-galactose-4-epimerase [Homo sapiens]
Length = 348
Score = 40.0 bits (92), Expect = 0.003
Identities = 65/263 (24%), Positives = 104/263 (39%), Gaps = 41/263 (15%)
Query: 9 RILVTGGSGLVGK---------AIQKVVAD--------GAGLPGE-------DWVFVSSK 44
++LVTGG+G +G VV D G LP V +
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE 63
Query: 45 DADLTDTAQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEV 104
+ D+ D + LF+K VIH A + + +++ LD++R N+ +L
Sbjct: 64 EMDILDQGALQRLFKKYSFMAVIHFAGL-KAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 105 GARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCT 164
G + +V S ++ + P+DE P Y +K I+ R Q T
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEA----HPTGGCTNPYGKSKFFIEEMIRDLCQA-DKT 177
Query: 165 FTAVIPT--NVFGPHDNFNI-EDGHVLPG--LIHKVHLAKSSGSALTVWGT------GNP 213
+ AV+ N G H + I ED +P + + +A AL V+G G
Sbjct: 178 WNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTG 237
Query: 214 RRQFIYSLDLAQLFIWVLREYNE 236
R +I+ +DLA+ I LR+ E
Sbjct: 238 VRDYIHVVDLAKGHIAALRKLKE 260
>gi|226371723 FCH domain only 2 isoform a [Homo sapiens]
Length = 810
Score = 30.4 bits (67), Expect = 2.2
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 11/55 (20%)
Query: 48 LTDTAQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAF 102
+T+TAQ F+ ++ TH+IH+ ++G L I K +H+ +H F
Sbjct: 195 MTETAQK---FQDIEETHLIHIKEIIGSLSNAI--------KEIHLQIGQVHEEF 238
>gi|33519455 methionine adenosyltransferase II, beta isoform 2
[Homo sapiens]
Length = 323
Score = 30.0 bits (66), Expect = 2.9
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 9/69 (13%)
Query: 9 RILVTGGSGLVGKAIQKVV------ADGAGLPGEDWVFVSSKDADLTDTAQTRALFEKVQ 62
R+LVTG +GL+G+A+ K A G G F + +L D+ + Q
Sbjct: 19 RVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKF---EQVNLLDSNAVHHIIHDFQ 75
Query: 63 PTHVIHLAA 71
P ++H AA
Sbjct: 76 PHVIVHCAA 84
>gi|11034825 methionine adenosyltransferase II, beta isoform 1
[Homo sapiens]
Length = 334
Score = 30.0 bits (66), Expect = 2.9
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 9/69 (13%)
Query: 9 RILVTGGSGLVGKAIQKVV------ADGAGLPGEDWVFVSSKDADLTDTAQTRALFEKVQ 62
R+LVTG +GL+G+A+ K A G G F + +L D+ + Q
Sbjct: 30 RVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKF---EQVNLLDSNAVHHIIHDFQ 86
Query: 63 PTHVIHLAA 71
P ++H AA
Sbjct: 87 PHVIVHCAA 95
>gi|14150045 calcium/calmodulin-dependent protein kinase 1 alpha
isoform a [Homo sapiens]
Length = 505
Score = 29.6 bits (65), Expect = 3.7
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 201 SGSALTVWGTGNPRRQFIY-SLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAV 259
SG AL VW TG F+Y FI L + EP++ EE E+S +E + +
Sbjct: 330 SGKALDVWATGVTLYCFVYGKCPFIDDFILALHRKIKNEPVVFP--EEPEIS-EELKDLI 386
Query: 260 VEAMDFHGE 268
++ +D + E
Sbjct: 387 LKMLDKNPE 395
>gi|148806859 calcium/calmodulin-dependent protein kinase 1 alpha
isoform b [Homo sapiens]
Length = 520
Score = 29.6 bits (65), Expect = 3.7
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 201 SGSALTVWGTGNPRRQFIY-SLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAV 259
SG AL VW TG F+Y FI L + EP++ EE E+S +E + +
Sbjct: 368 SGKALDVWATGVTLYCFVYGKCPFIDDFILALHRKIKNEPVVFP--EEPEIS-EELKDLI 424
Query: 260 VEAMDFHGE 268
++ +D + E
Sbjct: 425 LKMLDKNPE 433
>gi|27437011 calcium/calmodulin-dependent protein kinase 1 alpha
isoform a [Homo sapiens]
Length = 505
Score = 29.6 bits (65), Expect = 3.7
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 201 SGSALTVWGTGNPRRQFIY-SLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAV 259
SG AL VW TG F+Y FI L + EP++ EE E+S +E + +
Sbjct: 330 SGKALDVWATGVTLYCFVYGKCPFIDDFILALHRKIKNEPVVFP--EEPEIS-EELKDLI 386
Query: 260 VEAMDFHGE 268
++ +D + E
Sbjct: 387 LKMLDKNPE 395
>gi|14149688 hypothetical protein LOC25912 isoform 1 [Homo sapiens]
Length = 219
Score = 28.9 bits (63), Expect = 6.4
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 276 SDGQFKKTASNSKLRTYLPDFR--FTPFKQAVKETCAWFTDNYEQAR 320
S+G+ ++ R+YL D R TPFK K D YE AR
Sbjct: 85 SEGRHPRSLMGKNFRSYLLDLRNTSTPFKGVRKALIDTLLDGYETAR 131
>gi|41281688 hypothetical protein LOC25912 isoform 2 [Homo sapiens]
Length = 201
Score = 28.9 bits (63), Expect = 6.4
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 276 SDGQFKKTASNSKLRTYLPDFR--FTPFKQAVKETCAWFTDNYEQAR 320
S+G+ ++ R+YL D R TPFK K D YE AR
Sbjct: 67 SEGRHPRSLMGKNFRSYLLDLRNTSTPFKGVRKALIDTLLDGYETAR 113
>gi|148833486 hypothetical protein LOC25912 isoform 3 [Homo sapiens]
Length = 253
Score = 28.9 bits (63), Expect = 6.4
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 276 SDGQFKKTASNSKLRTYLPDFR--FTPFKQAVKETCAWFTDNYEQAR 320
S+G+ ++ R+YL D R TPFK K D YE AR
Sbjct: 119 SEGRHPRSLMGKNFRSYLLDLRNTSTPFKGVRKALIDTLLDGYETAR 165
>gi|57529737 PDZ domain containing ring finger 3 [Homo sapiens]
Length = 1066
Score = 28.9 bits (63), Expect = 6.4
Identities = 18/71 (25%), Positives = 29/71 (40%)
Query: 234 YNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNSKLRTYL 293
Y +LS+ E+ EV + ++ E + + SDG T S YL
Sbjct: 801 YGPASKNLLSITEDPEVGTPTYSPSLKELDPNQPLESKERRASDGSRSPTPSQKLGSAYL 860
Query: 294 PDFRFTPFKQA 304
P + +P+K A
Sbjct: 861 PSYHHSPYKHA 871
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.135 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,288,478
Number of Sequences: 37866
Number of extensions: 522441
Number of successful extensions: 983
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 974
Number of HSP's gapped (non-prelim): 20
length of query: 321
length of database: 18,247,518
effective HSP length: 102
effective length of query: 219
effective length of database: 14,385,186
effective search space: 3150355734
effective search space used: 3150355734
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.