BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|4507669 tumor protein, translationally-controlled 1 [Homo sapiens] (172 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|4507669 tumor protein, translationally-controlled 1 [Homo sap... 350 3e-97 gi|169178083 PREDICTED: similar to tumor protein, translationall... 268 2e-72 gi|169179309 PREDICTED: similar to tumor protein, translationall... 268 2e-72 gi|169181065 PREDICTED: similar to tumor protein, translationall... 266 9e-72 gi|46409468 hypothetical protein LOC392490 [Homo sapiens] 232 1e-61 gi|117414135 apoptosis inhibitor [Homo sapiens] 162 2e-40 gi|239752409 PREDICTED: similar to hCG1793821 [Homo sapiens] 154 5e-38 gi|239746926 PREDICTED: similar to hCG1793821 [Homo sapiens] 152 2e-37 gi|239757896 PREDICTED: similar to hCG1793821 [Homo sapiens] 151 2e-37 gi|48762942 huntingtin interacting protein-1-related [Homo sapiens] 33 0.16 gi|239750456 PREDICTED: similar to KIAA0655 protein [Homo sapiens] 33 0.16 gi|34740331 otoferlin isoform a [Homo sapiens] 28 3.0 gi|41352705 kinesin family member 3C [Homo sapiens] 28 3.0 gi|125988409 RED protein [Homo sapiens] 28 3.9 gi|21071077 dishevelled-associated activator of morphogenesis 1 ... 28 3.9 gi|75677576 dyslexia susceptibility 1 candidate 1 isoform c [Hom... 28 5.1 gi|75677567 dyslexia susceptibility 1 candidate 1 isoform b [Hom... 28 5.1 gi|75677570 dyslexia susceptibility 1 candidate 1 isoform a [Hom... 28 5.1 gi|21237725 phosphoinositide-3-kinase, catalytic, gamma polypept... 27 6.7 gi|109826564 neurofibromin isoform 1 [Homo sapiens] 27 8.7 gi|4557793 neurofibromin isoform 2 [Homo sapiens] 27 8.7 gi|189458804 neurofibromin isoform 3 [Homo sapiens] 27 8.7 >gi|4507669 tumor protein, translationally-controlled 1 [Homo sapiens] Length = 172 Score = 350 bits (898), Expect = 3e-97 Identities = 172/172 (100%), Positives = 172/172 (100%) Query: 1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE Sbjct: 1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60 Query: 61 GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120 GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE Sbjct: 61 GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120 Query: 121 QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172 QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC Sbjct: 121 QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172 >gi|169178083 PREDICTED: similar to tumor protein, translationally-controlled 1 [Homo sapiens] Length = 138 Score = 268 bits (684), Expect = 2e-72 Identities = 130/138 (94%), Positives = 133/138 (96%) Query: 35 MVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDIVMNHHLQETSFTKEAYKKYIKD 94 MVSRTEGNIDDSLIGGN SAEGPEGEGTESTVIT VD+VMNHHLQETSFTKEA+KKYIKD Sbjct: 1 MVSRTEGNIDDSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKD 60 Query: 95 YMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYRED 154 YMKSIKGKLEE RPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDY ED Sbjct: 61 YMKSIKGKLEELRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYGED 120 Query: 155 GVTPYMIFFKDGLEMEKC 172 GVTPYMIFF+DGLE EKC Sbjct: 121 GVTPYMIFFRDGLETEKC 138 >gi|169179309 PREDICTED: similar to tumor protein, translationally-controlled 1 [Homo sapiens] Length = 138 Score = 268 bits (684), Expect = 2e-72 Identities = 130/138 (94%), Positives = 133/138 (96%) Query: 35 MVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDIVMNHHLQETSFTKEAYKKYIKD 94 MVSRTEGNIDDSLIGGN SAEGPEGEGTESTVIT VD+VMNHHLQETSFTKEA+KKYIKD Sbjct: 1 MVSRTEGNIDDSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKD 60 Query: 95 YMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYRED 154 YMKSIKGKLEE RPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDY ED Sbjct: 61 YMKSIKGKLEELRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYGED 120 Query: 155 GVTPYMIFFKDGLEMEKC 172 GVTPYMIFF+DGLE EKC Sbjct: 121 GVTPYMIFFRDGLETEKC 138 >gi|169181065 PREDICTED: similar to tumor protein, translationally-controlled 1 [Homo sapiens] Length = 138 Score = 266 bits (679), Expect = 9e-72 Identities = 129/138 (93%), Positives = 132/138 (95%) Query: 35 MVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDIVMNHHLQETSFTKEAYKKYIKD 94 MVSRTEGNIDDSLIGGN SAEGPEGEGTESTVIT VD+VMNHHLQETSFTKEA+KKYIKD Sbjct: 1 MVSRTEGNIDDSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKD 60 Query: 95 YMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYRED 154 YMKSIKGKLEE RPERVKPFMTGAAEQIKHILANFKNY FFIGENMNPDGMVALLDY ED Sbjct: 61 YMKSIKGKLEELRPERVKPFMTGAAEQIKHILANFKNYHFFIGENMNPDGMVALLDYGED 120 Query: 155 GVTPYMIFFKDGLEMEKC 172 GVTPYMIFF+DGLE EKC Sbjct: 121 GVTPYMIFFRDGLETEKC 138 >gi|46409468 hypothetical protein LOC392490 [Homo sapiens] Length = 140 Score = 232 bits (591), Expect = 1e-61 Identities = 118/133 (88%), Positives = 122/133 (91%) Query: 1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60 MI Y DLISH EMFSD Y +EIADGL LEVEGK+VSRTEGNI DSLIGGNASAEGPEG+ Sbjct: 6 MITYWDLISHSEMFSDSYMSQEIADGLRLEVEGKIVSRTEGNIFDSLIGGNASAEGPEGK 65 Query: 61 GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120 GTESTVITGVD VMNHHLQETSFTKEAY K IKDYMKSIKGKLEEQRP+RVKPFMTGAAE Sbjct: 66 GTESTVITGVDSVMNHHLQETSFTKEAYNKCIKDYMKSIKGKLEEQRPKRVKPFMTGAAE 125 Query: 121 QIKHILANFKNYQ 133 QIKHILANFKNYQ Sbjct: 126 QIKHILANFKNYQ 138 >gi|117414135 apoptosis inhibitor [Homo sapiens] Length = 127 Score = 162 bits (409), Expect = 2e-40 Identities = 84/118 (71%), Positives = 93/118 (78%) Query: 13 MFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDI 72 MFSDIYKI EI +GLCLEVE KM+S+T GN DDSLIG N+S+E E E TEST+IT VDI Sbjct: 1 MFSDIYKIWEITNGLCLEVEQKMLSKTTGNTDDSLIGRNSSSESTEDEVTESTIITSVDI 60 Query: 73 VMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFK 130 V NHHLQE+ FTKEAYKKYIKDYMKSI KLEEQRPERVK F+TG + L FK Sbjct: 61 VTNHHLQESIFTKEAYKKYIKDYMKSINEKLEEQRPERVKLFITGMKNKSSTSLLIFK 118 >gi|239752409 PREDICTED: similar to hCG1793821 [Homo sapiens] Length = 131 Score = 154 bits (388), Expect = 5e-38 Identities = 95/170 (55%), Positives = 105/170 (61%), Gaps = 41/170 (24%) Query: 1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60 MIIY DLISH S+IYK +EI G CLEVEGK+VSRTE NID SLIG NAS E PEGE Sbjct: 1 MIIYPDLISH----SEIYKNQEITKGPCLEVEGKIVSRTEDNIDGSLIGRNASTEVPEGE 56 Query: 61 GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120 T+STVITGVD VM++HLQETSFTKEA Sbjct: 57 ETQSTVITGVD-VMHYHLQETSFTKEASHP------------------------------ 85 Query: 121 QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEME 170 NFK YQFFIGEN N D +VALLDY ED V +M+FFKD LEM+ Sbjct: 86 ------CNFKIYQFFIGENKNLDSVVALLDYCEDTVILHMLFFKDDLEMK 129 >gi|239746926 PREDICTED: similar to hCG1793821 [Homo sapiens] Length = 131 Score = 152 bits (383), Expect = 2e-37 Identities = 94/170 (55%), Positives = 104/170 (61%), Gaps = 41/170 (24%) Query: 1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60 MIIY DLISH S+IYK +EI G CLEVEGK+VSRTE N D SLIG NAS E PEGE Sbjct: 1 MIIYPDLISH----SEIYKNQEITKGPCLEVEGKIVSRTEDNTDGSLIGRNASTEVPEGE 56 Query: 61 GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120 T+STVITGVD VM++HLQETSFTKEA Sbjct: 57 ETQSTVITGVD-VMHYHLQETSFTKEASHP------------------------------ 85 Query: 121 QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEME 170 NFK YQFFIGEN N D +VALLDY ED V +M+FFKD LEM+ Sbjct: 86 ------CNFKIYQFFIGENKNLDSVVALLDYCEDTVILHMLFFKDDLEMK 129 >gi|239757896 PREDICTED: similar to hCG1793821 [Homo sapiens] Length = 131 Score = 151 bits (382), Expect = 2e-37 Identities = 94/170 (55%), Positives = 104/170 (61%), Gaps = 41/170 (24%) Query: 1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60 MIIY DLISH S+IYK +EI G CLEVEGK+VSRTE NID SLIG NAS E PEGE Sbjct: 1 MIIYPDLISH----SEIYKNQEITKGPCLEVEGKIVSRTEDNIDGSLIGRNASTEVPEGE 56 Query: 61 GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120 T+STVITGVD VM++HLQETSFTKEA Sbjct: 57 ETQSTVITGVD-VMHYHLQETSFTKEASHP------------------------------ 85 Query: 121 QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEME 170 NFK YQFFIGEN N D +VALLDY ED V +M+FF D LEM+ Sbjct: 86 ------CNFKIYQFFIGENKNLDSVVALLDYCEDTVILHMLFFXDDLEMK 129 >gi|48762942 huntingtin interacting protein-1-related [Homo sapiens] Length = 1068 Score = 32.7 bits (73), Expect = 0.16 Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 2/61 (3%) Query: 73 VMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNY 132 ++ L++ + Y +K + +++G+LEEQR ++ K + EQ++H LA + Sbjct: 365 MLRSELEKIKLEAQRYIAQLKSQVNALEGELEEQRKQKQKALVDN--EQLRHELAQLRAA 422 Query: 133 Q 133 Q Sbjct: 423 Q 423 >gi|239750456 PREDICTED: similar to KIAA0655 protein [Homo sapiens] Length = 1048 Score = 32.7 bits (73), Expect = 0.16 Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 2/61 (3%) Query: 73 VMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNY 132 ++ L++ + Y +K + +++G+LEEQR ++ K + EQ++H LA + Sbjct: 345 MLRSELEKIKLEAQRYIAQLKSQVNALEGELEEQRKQKQKALVDN--EQLRHELAQLRAA 402 Query: 133 Q 133 Q Sbjct: 403 Q 403 >gi|34740331 otoferlin isoform a [Homo sapiens] Length = 1997 Score = 28.5 bits (62), Expect = 3.0 Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 9/123 (7%) Query: 23 IADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDIVMNHHLQETS 82 I LC+EV + T G+ DD G+ S + E + E+ + + E S Sbjct: 108 IKTSLCVEVRYQATDGTVGSWDDGDFLGDESLQEEEKDSQETDGLLPGSRPSSRPPGEKS 167 Query: 83 FTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNP 142 F + + + MK K + ++ P+R E + H+ +G+ ++P Sbjct: 168 FRRAG--RSVFSAMKLGKNRSHKEEPQRPDEPAVLEMEDLDHLAIR-------LGDGLDP 218 Query: 143 DGM 145 D + Sbjct: 219 DSV 221 >gi|41352705 kinesin family member 3C [Homo sapiens] Length = 793 Score = 28.5 bits (62), Expect = 3.0 Identities = 15/51 (29%), Positives = 27/51 (52%) Query: 57 PEGEGTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQR 107 PEG E+ V D N+H + A +K +++Y++ K +LEE++ Sbjct: 422 PEGPVIEAWVAEEEDDNNNNHRPPQPILESALEKNMENYLQEQKERLEEEK 472 >gi|125988409 RED protein [Homo sapiens] Length = 557 Score = 28.1 bits (61), Expect = 3.9 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 6/67 (8%) Query: 42 NIDDSLIGGNASAEGPEGEGTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKG 101 +I +LI A E + T +T DIV++ Q S+ ++ + K K KG Sbjct: 251 DIPTTLIRSKADCPTMEAQ----TTLTTNDIVISKLTQILSYLRQGTRN--KKLKKKDKG 304 Query: 102 KLEEQRP 108 KLEE++P Sbjct: 305 KLEEKKP 311 >gi|21071077 dishevelled-associated activator of morphogenesis 1 [Homo sapiens] Length = 1078 Score = 28.1 bits (61), Expect = 3.9 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Query: 74 MNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNY 132 +NH+ Q +KK + + +K K+E R + F +GA +Q+ ++ F NY Sbjct: 767 INHYQQRLQSLY--FKKKFAERVAEVKPKVEAIRSGSEEVFRSGALKQLLEVVLAFGNY 823 >gi|75677576 dyslexia susceptibility 1 candidate 1 isoform c [Homo sapiens] Length = 381 Score = 27.7 bits (60), Expect = 5.1 Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 12/83 (14%) Query: 63 ESTVITGVDIVMNHHLQETSF------------TKEAYKKYIKDYMKSIKGKLEEQRPER 110 E+ +TGVD M ++E S K A K+ + Y S+ K+EE+ ++ Sbjct: 84 ETLSVTGVDKEMMQRIREKSILQAQERAKEATEAKAAAKREDQKYALSVMMKIEEEERKK 143 Query: 111 VKPFMTGAAEQIKHILANFKNYQ 133 ++ + L +K YQ Sbjct: 144 IEDMKENERIKATKALEAWKEYQ 166 >gi|75677567 dyslexia susceptibility 1 candidate 1 isoform b [Homo sapiens] Length = 376 Score = 27.7 bits (60), Expect = 5.1 Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 12/83 (14%) Query: 63 ESTVITGVDIVMNHHLQETSF------------TKEAYKKYIKDYMKSIKGKLEEQRPER 110 E+ +TGVD M ++E S K A K+ + Y S+ K+EE+ ++ Sbjct: 84 ETLSVTGVDKEMMQRIREKSILQAQERAKEATEAKAAAKREDQKYALSVMMKIEEEERKK 143 Query: 111 VKPFMTGAAEQIKHILANFKNYQ 133 ++ + L +K YQ Sbjct: 144 IEDMKENERIKATKALEAWKEYQ 166 >gi|75677570 dyslexia susceptibility 1 candidate 1 isoform a [Homo sapiens] Length = 420 Score = 27.7 bits (60), Expect = 5.1 Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 12/83 (14%) Query: 63 ESTVITGVDIVMNHHLQETSF------------TKEAYKKYIKDYMKSIKGKLEEQRPER 110 E+ +TGVD M ++E S K A K+ + Y S+ K+EE+ ++ Sbjct: 84 ETLSVTGVDKEMMQRIREKSILQAQERAKEATEAKAAAKREDQKYALSVMMKIEEEERKK 143 Query: 111 VKPFMTGAAEQIKHILANFKNYQ 133 ++ + L +K YQ Sbjct: 144 IEDMKENERIKATKALEAWKEYQ 166 >gi|21237725 phosphoinositide-3-kinase, catalytic, gamma polypeptide [Homo sapiens] Length = 1102 Score = 27.3 bits (59), Expect = 6.7 Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 10/72 (13%) Query: 71 DIVMNHHLQETSFTKEAYKKYIKDYMKSIKG--------KLEEQRPERVKPFMTGAAEQI 122 D V+NH L+E S T+E ++ ++ ++ S G + ++ + + TG I Sbjct: 904 DEVLNHWLKEKSPTEEKFQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMITETGNLFHI 963 Query: 123 K--HILANFKNY 132 HIL N+K++ Sbjct: 964 DFGHILGNYKSF 975 >gi|109826564 neurofibromin isoform 1 [Homo sapiens] Length = 2839 Score = 26.9 bits (58), Expect = 8.7 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Query: 44 DDSLIGGNASAEGPEGEGTESTVITG-VDIVMNHHLQE 80 D L+ N +GPE +G+ + +ITG V +V H+ E Sbjct: 503 DPKLLLCNPRKQGPETQGSTAELITGLVQLVPQSHMPE 540 >gi|4557793 neurofibromin isoform 2 [Homo sapiens] Length = 2818 Score = 26.9 bits (58), Expect = 8.7 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Query: 44 DDSLIGGNASAEGPEGEGTESTVITG-VDIVMNHHLQE 80 D L+ N +GPE +G+ + +ITG V +V H+ E Sbjct: 503 DPKLLLCNPRKQGPETQGSTAELITGLVQLVPQSHMPE 540 >gi|189458804 neurofibromin isoform 3 [Homo sapiens] Length = 593 Score = 26.9 bits (58), Expect = 8.7 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Query: 44 DDSLIGGNASAEGPEGEGTESTVITG-VDIVMNHHLQE 80 D L+ N +GPE +G+ + +ITG V +V H+ E Sbjct: 503 DPKLLLCNPRKQGPETQGSTAELITGLVQLVPQSHMPE 540 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.318 0.138 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,122,676 Number of Sequences: 37866 Number of extensions: 244443 Number of successful extensions: 782 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 11 Number of HSP's that attempted gapping in prelim test: 762 Number of HSP's gapped (non-prelim): 25 length of query: 172 length of database: 18,247,518 effective HSP length: 95 effective length of query: 77 effective length of database: 14,650,248 effective search space: 1128069096 effective search space used: 1128069096 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.