Guide to the Human Genome
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Search of human proteins with 4507669

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4507669 tumor protein, translationally-controlled 1 [Homo
sapiens]
         (172 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4507669 tumor protein, translationally-controlled 1 [Homo sap...   350   3e-97
gi|169178083 PREDICTED: similar to tumor protein, translationall...   268   2e-72
gi|169179309 PREDICTED: similar to tumor protein, translationall...   268   2e-72
gi|169181065 PREDICTED: similar to tumor protein, translationall...   266   9e-72
gi|46409468 hypothetical protein LOC392490 [Homo sapiens]             232   1e-61
gi|117414135 apoptosis inhibitor [Homo sapiens]                       162   2e-40
gi|239752409 PREDICTED: similar to hCG1793821 [Homo sapiens]          154   5e-38
gi|239746926 PREDICTED: similar to hCG1793821 [Homo sapiens]          152   2e-37
gi|239757896 PREDICTED: similar to hCG1793821 [Homo sapiens]          151   2e-37
gi|48762942 huntingtin interacting protein-1-related [Homo sapiens]    33   0.16 
gi|239750456 PREDICTED: similar to KIAA0655 protein [Homo sapiens]     33   0.16 
gi|34740331 otoferlin isoform a [Homo sapiens]                         28   3.0  
gi|41352705 kinesin family member 3C [Homo sapiens]                    28   3.0  
gi|125988409 RED protein [Homo sapiens]                                28   3.9  
gi|21071077 dishevelled-associated activator of morphogenesis 1 ...    28   3.9  
gi|75677576 dyslexia susceptibility 1 candidate 1 isoform c [Hom...    28   5.1  
gi|75677567 dyslexia susceptibility 1 candidate 1 isoform b [Hom...    28   5.1  
gi|75677570 dyslexia susceptibility 1 candidate 1 isoform a [Hom...    28   5.1  
gi|21237725 phosphoinositide-3-kinase, catalytic, gamma polypept...    27   6.7  
gi|109826564 neurofibromin isoform 1 [Homo sapiens]                    27   8.7  
gi|4557793 neurofibromin isoform 2 [Homo sapiens]                      27   8.7  
gi|189458804 neurofibromin isoform 3 [Homo sapiens]                    27   8.7  

>gi|4507669 tumor protein, translationally-controlled 1 [Homo
           sapiens]
          Length = 172

 Score =  350 bits (898), Expect = 3e-97
 Identities = 172/172 (100%), Positives = 172/172 (100%)

Query: 1   MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60
           MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE
Sbjct: 1   MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60

Query: 61  GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120
           GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE
Sbjct: 61  GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120

Query: 121 QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172
           QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC
Sbjct: 121 QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172


>gi|169178083 PREDICTED: similar to tumor protein,
           translationally-controlled 1 [Homo sapiens]
          Length = 138

 Score =  268 bits (684), Expect = 2e-72
 Identities = 130/138 (94%), Positives = 133/138 (96%)

Query: 35  MVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDIVMNHHLQETSFTKEAYKKYIKD 94
           MVSRTEGNIDDSLIGGN SAEGPEGEGTESTVIT VD+VMNHHLQETSFTKEA+KKYIKD
Sbjct: 1   MVSRTEGNIDDSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKD 60

Query: 95  YMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYRED 154
           YMKSIKGKLEE RPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDY ED
Sbjct: 61  YMKSIKGKLEELRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYGED 120

Query: 155 GVTPYMIFFKDGLEMEKC 172
           GVTPYMIFF+DGLE EKC
Sbjct: 121 GVTPYMIFFRDGLETEKC 138


>gi|169179309 PREDICTED: similar to tumor protein,
           translationally-controlled 1 [Homo sapiens]
          Length = 138

 Score =  268 bits (684), Expect = 2e-72
 Identities = 130/138 (94%), Positives = 133/138 (96%)

Query: 35  MVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDIVMNHHLQETSFTKEAYKKYIKD 94
           MVSRTEGNIDDSLIGGN SAEGPEGEGTESTVIT VD+VMNHHLQETSFTKEA+KKYIKD
Sbjct: 1   MVSRTEGNIDDSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKD 60

Query: 95  YMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYRED 154
           YMKSIKGKLEE RPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDY ED
Sbjct: 61  YMKSIKGKLEELRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYGED 120

Query: 155 GVTPYMIFFKDGLEMEKC 172
           GVTPYMIFF+DGLE EKC
Sbjct: 121 GVTPYMIFFRDGLETEKC 138


>gi|169181065 PREDICTED: similar to tumor protein,
           translationally-controlled 1 [Homo sapiens]
          Length = 138

 Score =  266 bits (679), Expect = 9e-72
 Identities = 129/138 (93%), Positives = 132/138 (95%)

Query: 35  MVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDIVMNHHLQETSFTKEAYKKYIKD 94
           MVSRTEGNIDDSLIGGN SAEGPEGEGTESTVIT VD+VMNHHLQETSFTKEA+KKYIKD
Sbjct: 1   MVSRTEGNIDDSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKD 60

Query: 95  YMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYRED 154
           YMKSIKGKLEE RPERVKPFMTGAAEQIKHILANFKNY FFIGENMNPDGMVALLDY ED
Sbjct: 61  YMKSIKGKLEELRPERVKPFMTGAAEQIKHILANFKNYHFFIGENMNPDGMVALLDYGED 120

Query: 155 GVTPYMIFFKDGLEMEKC 172
           GVTPYMIFF+DGLE EKC
Sbjct: 121 GVTPYMIFFRDGLETEKC 138


>gi|46409468 hypothetical protein LOC392490 [Homo sapiens]
          Length = 140

 Score =  232 bits (591), Expect = 1e-61
 Identities = 118/133 (88%), Positives = 122/133 (91%)

Query: 1   MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60
           MI Y DLISH EMFSD Y  +EIADGL LEVEGK+VSRTEGNI DSLIGGNASAEGPEG+
Sbjct: 6   MITYWDLISHSEMFSDSYMSQEIADGLRLEVEGKIVSRTEGNIFDSLIGGNASAEGPEGK 65

Query: 61  GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120
           GTESTVITGVD VMNHHLQETSFTKEAY K IKDYMKSIKGKLEEQRP+RVKPFMTGAAE
Sbjct: 66  GTESTVITGVDSVMNHHLQETSFTKEAYNKCIKDYMKSIKGKLEEQRPKRVKPFMTGAAE 125

Query: 121 QIKHILANFKNYQ 133
           QIKHILANFKNYQ
Sbjct: 126 QIKHILANFKNYQ 138


>gi|117414135 apoptosis inhibitor [Homo sapiens]
          Length = 127

 Score =  162 bits (409), Expect = 2e-40
 Identities = 84/118 (71%), Positives = 93/118 (78%)

Query: 13  MFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDI 72
           MFSDIYKI EI +GLCLEVE KM+S+T GN DDSLIG N+S+E  E E TEST+IT VDI
Sbjct: 1   MFSDIYKIWEITNGLCLEVEQKMLSKTTGNTDDSLIGRNSSSESTEDEVTESTIITSVDI 60

Query: 73  VMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFK 130
           V NHHLQE+ FTKEAYKKYIKDYMKSI  KLEEQRPERVK F+TG   +    L  FK
Sbjct: 61  VTNHHLQESIFTKEAYKKYIKDYMKSINEKLEEQRPERVKLFITGMKNKSSTSLLIFK 118


>gi|239752409 PREDICTED: similar to hCG1793821 [Homo sapiens]
          Length = 131

 Score =  154 bits (388), Expect = 5e-38
 Identities = 95/170 (55%), Positives = 105/170 (61%), Gaps = 41/170 (24%)

Query: 1   MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60
           MIIY DLISH    S+IYK +EI  G CLEVEGK+VSRTE NID SLIG NAS E PEGE
Sbjct: 1   MIIYPDLISH----SEIYKNQEITKGPCLEVEGKIVSRTEDNIDGSLIGRNASTEVPEGE 56

Query: 61  GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120
            T+STVITGVD VM++HLQETSFTKEA                                 
Sbjct: 57  ETQSTVITGVD-VMHYHLQETSFTKEASHP------------------------------ 85

Query: 121 QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEME 170
                  NFK YQFFIGEN N D +VALLDY ED V  +M+FFKD LEM+
Sbjct: 86  ------CNFKIYQFFIGENKNLDSVVALLDYCEDTVILHMLFFKDDLEMK 129


>gi|239746926 PREDICTED: similar to hCG1793821 [Homo sapiens]
          Length = 131

 Score =  152 bits (383), Expect = 2e-37
 Identities = 94/170 (55%), Positives = 104/170 (61%), Gaps = 41/170 (24%)

Query: 1   MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60
           MIIY DLISH    S+IYK +EI  G CLEVEGK+VSRTE N D SLIG NAS E PEGE
Sbjct: 1   MIIYPDLISH----SEIYKNQEITKGPCLEVEGKIVSRTEDNTDGSLIGRNASTEVPEGE 56

Query: 61  GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120
            T+STVITGVD VM++HLQETSFTKEA                                 
Sbjct: 57  ETQSTVITGVD-VMHYHLQETSFTKEASHP------------------------------ 85

Query: 121 QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEME 170
                  NFK YQFFIGEN N D +VALLDY ED V  +M+FFKD LEM+
Sbjct: 86  ------CNFKIYQFFIGENKNLDSVVALLDYCEDTVILHMLFFKDDLEMK 129


>gi|239757896 PREDICTED: similar to hCG1793821 [Homo sapiens]
          Length = 131

 Score =  151 bits (382), Expect = 2e-37
 Identities = 94/170 (55%), Positives = 104/170 (61%), Gaps = 41/170 (24%)

Query: 1   MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60
           MIIY DLISH    S+IYK +EI  G CLEVEGK+VSRTE NID SLIG NAS E PEGE
Sbjct: 1   MIIYPDLISH----SEIYKNQEITKGPCLEVEGKIVSRTEDNIDGSLIGRNASTEVPEGE 56

Query: 61  GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120
            T+STVITGVD VM++HLQETSFTKEA                                 
Sbjct: 57  ETQSTVITGVD-VMHYHLQETSFTKEASHP------------------------------ 85

Query: 121 QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEME 170
                  NFK YQFFIGEN N D +VALLDY ED V  +M+FF D LEM+
Sbjct: 86  ------CNFKIYQFFIGENKNLDSVVALLDYCEDTVILHMLFFXDDLEMK 129


>gi|48762942 huntingtin interacting protein-1-related [Homo sapiens]
          Length = 1068

 Score = 32.7 bits (73), Expect = 0.16
 Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 2/61 (3%)

Query: 73  VMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNY 132
           ++   L++     + Y   +K  + +++G+LEEQR ++ K  +    EQ++H LA  +  
Sbjct: 365 MLRSELEKIKLEAQRYIAQLKSQVNALEGELEEQRKQKQKALVDN--EQLRHELAQLRAA 422

Query: 133 Q 133
           Q
Sbjct: 423 Q 423


>gi|239750456 PREDICTED: similar to KIAA0655 protein [Homo sapiens]
          Length = 1048

 Score = 32.7 bits (73), Expect = 0.16
 Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 2/61 (3%)

Query: 73  VMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNY 132
           ++   L++     + Y   +K  + +++G+LEEQR ++ K  +    EQ++H LA  +  
Sbjct: 345 MLRSELEKIKLEAQRYIAQLKSQVNALEGELEEQRKQKQKALVDN--EQLRHELAQLRAA 402

Query: 133 Q 133
           Q
Sbjct: 403 Q 403


>gi|34740331 otoferlin isoform a [Homo sapiens]
          Length = 1997

 Score = 28.5 bits (62), Expect = 3.0
 Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 9/123 (7%)

Query: 23  IADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDIVMNHHLQETS 82
           I   LC+EV  +    T G+ DD    G+ S +  E +  E+  +       +    E S
Sbjct: 108 IKTSLCVEVRYQATDGTVGSWDDGDFLGDESLQEEEKDSQETDGLLPGSRPSSRPPGEKS 167

Query: 83  FTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNP 142
           F +    + +   MK  K +  ++ P+R         E + H+          +G+ ++P
Sbjct: 168 FRRAG--RSVFSAMKLGKNRSHKEEPQRPDEPAVLEMEDLDHLAIR-------LGDGLDP 218

Query: 143 DGM 145
           D +
Sbjct: 219 DSV 221


>gi|41352705 kinesin family member 3C [Homo sapiens]
          Length = 793

 Score = 28.5 bits (62), Expect = 3.0
 Identities = 15/51 (29%), Positives = 27/51 (52%)

Query: 57  PEGEGTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQR 107
           PEG   E+ V    D   N+H       + A +K +++Y++  K +LEE++
Sbjct: 422 PEGPVIEAWVAEEEDDNNNNHRPPQPILESALEKNMENYLQEQKERLEEEK 472


>gi|125988409 RED protein [Homo sapiens]
          Length = 557

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 6/67 (8%)

Query: 42  NIDDSLIGGNASAEGPEGEGTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKG 101
           +I  +LI   A     E +    T +T  DIV++   Q  S+ ++  +   K   K  KG
Sbjct: 251 DIPTTLIRSKADCPTMEAQ----TTLTTNDIVISKLTQILSYLRQGTRN--KKLKKKDKG 304

Query: 102 KLEEQRP 108
           KLEE++P
Sbjct: 305 KLEEKKP 311


>gi|21071077 dishevelled-associated activator of morphogenesis 1
           [Homo sapiens]
          Length = 1078

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 2/59 (3%)

Query: 74  MNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNY 132
           +NH+ Q        +KK   + +  +K K+E  R    + F +GA +Q+  ++  F NY
Sbjct: 767 INHYQQRLQSLY--FKKKFAERVAEVKPKVEAIRSGSEEVFRSGALKQLLEVVLAFGNY 823


>gi|75677576 dyslexia susceptibility 1 candidate 1 isoform c [Homo
           sapiens]
          Length = 381

 Score = 27.7 bits (60), Expect = 5.1
 Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 12/83 (14%)

Query: 63  ESTVITGVDIVMNHHLQETSF------------TKEAYKKYIKDYMKSIKGKLEEQRPER 110
           E+  +TGVD  M   ++E S              K A K+  + Y  S+  K+EE+  ++
Sbjct: 84  ETLSVTGVDKEMMQRIREKSILQAQERAKEATEAKAAAKREDQKYALSVMMKIEEEERKK 143

Query: 111 VKPFMTGAAEQIKHILANFKNYQ 133
           ++        +    L  +K YQ
Sbjct: 144 IEDMKENERIKATKALEAWKEYQ 166


>gi|75677567 dyslexia susceptibility 1 candidate 1 isoform b [Homo
           sapiens]
          Length = 376

 Score = 27.7 bits (60), Expect = 5.1
 Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 12/83 (14%)

Query: 63  ESTVITGVDIVMNHHLQETSF------------TKEAYKKYIKDYMKSIKGKLEEQRPER 110
           E+  +TGVD  M   ++E S              K A K+  + Y  S+  K+EE+  ++
Sbjct: 84  ETLSVTGVDKEMMQRIREKSILQAQERAKEATEAKAAAKREDQKYALSVMMKIEEEERKK 143

Query: 111 VKPFMTGAAEQIKHILANFKNYQ 133
           ++        +    L  +K YQ
Sbjct: 144 IEDMKENERIKATKALEAWKEYQ 166


>gi|75677570 dyslexia susceptibility 1 candidate 1 isoform a [Homo
           sapiens]
          Length = 420

 Score = 27.7 bits (60), Expect = 5.1
 Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 12/83 (14%)

Query: 63  ESTVITGVDIVMNHHLQETSF------------TKEAYKKYIKDYMKSIKGKLEEQRPER 110
           E+  +TGVD  M   ++E S              K A K+  + Y  S+  K+EE+  ++
Sbjct: 84  ETLSVTGVDKEMMQRIREKSILQAQERAKEATEAKAAAKREDQKYALSVMMKIEEEERKK 143

Query: 111 VKPFMTGAAEQIKHILANFKNYQ 133
           ++        +    L  +K YQ
Sbjct: 144 IEDMKENERIKATKALEAWKEYQ 166


>gi|21237725 phosphoinositide-3-kinase, catalytic, gamma polypeptide
           [Homo sapiens]
          Length = 1102

 Score = 27.3 bits (59), Expect = 6.7
 Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 10/72 (13%)

Query: 71  DIVMNHHLQETSFTKEAYKKYIKDYMKSIKG--------KLEEQRPERVKPFMTGAAEQI 122
           D V+NH L+E S T+E ++  ++ ++ S  G         + ++  + +    TG    I
Sbjct: 904 DEVLNHWLKEKSPTEEKFQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMITETGNLFHI 963

Query: 123 K--HILANFKNY 132
              HIL N+K++
Sbjct: 964 DFGHILGNYKSF 975


>gi|109826564 neurofibromin isoform 1 [Homo sapiens]
          Length = 2839

 Score = 26.9 bits (58), Expect = 8.7
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 44  DDSLIGGNASAEGPEGEGTESTVITG-VDIVMNHHLQE 80
           D  L+  N   +GPE +G+ + +ITG V +V   H+ E
Sbjct: 503 DPKLLLCNPRKQGPETQGSTAELITGLVQLVPQSHMPE 540


>gi|4557793 neurofibromin isoform 2 [Homo sapiens]
          Length = 2818

 Score = 26.9 bits (58), Expect = 8.7
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 44  DDSLIGGNASAEGPEGEGTESTVITG-VDIVMNHHLQE 80
           D  L+  N   +GPE +G+ + +ITG V +V   H+ E
Sbjct: 503 DPKLLLCNPRKQGPETQGSTAELITGLVQLVPQSHMPE 540


>gi|189458804 neurofibromin isoform 3 [Homo sapiens]
          Length = 593

 Score = 26.9 bits (58), Expect = 8.7
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 44  DDSLIGGNASAEGPEGEGTESTVITG-VDIVMNHHLQE 80
           D  L+  N   +GPE +G+ + +ITG V +V   H+ E
Sbjct: 503 DPKLLLCNPRKQGPETQGSTAELITGLVQLVPQSHMPE 540


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.138    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,122,676
Number of Sequences: 37866
Number of extensions: 244443
Number of successful extensions: 782
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 762
Number of HSP's gapped (non-prelim): 25
length of query: 172
length of database: 18,247,518
effective HSP length: 95
effective length of query: 77
effective length of database: 14,650,248
effective search space: 1128069096
effective search space used: 1128069096
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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