Search of human proteins with 4507319

Search of human proteins with 4507319

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4507319 surfeit 1 [Homo sapiens]
         (300 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4507319 surfeit 1 [Homo sapiens]                                   610   e-175
gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f...    30   2.6  
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e...    30   2.6  
gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d...    30   2.6  
gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b ...    30   2.6  
gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a ...    30   2.6  
gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c ...    30   2.6  
gi|145279222 WD repeat domain 66 [Homo sapiens]                        29   4.4  
gi|239753986 PREDICTED: similar to hCG1989907 [Homo sapiens]           28   7.6  
gi|239748521 PREDICTED: hypothetical protein XP_002346713 [Homo ...    28   7.6  
gi|239742701 PREDICTED: hypothetical protein XP_002342609 [Homo ...    28   7.6  
gi|239742492 PREDICTED: hypothetical protein XP_002342529 [Homo ...    28   7.6  
gi|122937211 KIAA0368 protein [Homo sapiens]                           28   7.6  
gi|169636420 carbonic anhydrase IX precursor [Homo sapiens]            28   9.9  

>gi|4507319 surfeit 1 [Homo sapiens]
          Length = 300

 Score =  610 bits (1574), Expect = e-175
 Identities = 300/300 (100%), Positives = 300/300 (100%)

Query: 1   MAAVAALQLGLRAAGLGRAPASAAWRSVLRVSPRPGVAWRPSRCGSSAAEASATKAEDDS 60
           MAAVAALQLGLRAAGLGRAPASAAWRSVLRVSPRPGVAWRPSRCGSSAAEASATKAEDDS
Sbjct: 1   MAAVAALQLGLRAAGLGRAPASAAWRSVLRVSPRPGVAWRPSRCGSSAAEASATKAEDDS 60

Query: 61  FLQWVLLLIPVTAFGLGTWQVQRRKWKLNLIAELESRVLAEPVPLPADPMELKNLEYRPV 120
           FLQWVLLLIPVTAFGLGTWQVQRRKWKLNLIAELESRVLAEPVPLPADPMELKNLEYRPV
Sbjct: 61  FLQWVLLLIPVTAFGLGTWQVQRRKWKLNLIAELESRVLAEPVPLPADPMELKNLEYRPV 120

Query: 121 KVRGCFDHSKELYMMPRTMVDPVREAREGGLISSSTQSGAYVVTPFHCTDLGVTILVNRG 180
           KVRGCFDHSKELYMMPRTMVDPVREAREGGLISSSTQSGAYVVTPFHCTDLGVTILVNRG
Sbjct: 121 KVRGCFDHSKELYMMPRTMVDPVREAREGGLISSSTQSGAYVVTPFHCTDLGVTILVNRG 180

Query: 181 FVPRKKVNPETRQKGQIEGEVDLIGMVRLTETRQPFVPENNPERNHWHYRDLEAMARITG 240
           FVPRKKVNPETRQKGQIEGEVDLIGMVRLTETRQPFVPENNPERNHWHYRDLEAMARITG
Sbjct: 181 FVPRKKVNPETRQKGQIEGEVDLIGMVRLTETRQPFVPENNPERNHWHYRDLEAMARITG 240

Query: 241 AEPIFIDANFQSTVPGGPIGGQTRVTLRNEHLQYIVTWYGLSAATSYLWFKKFLRGTPGV 300
           AEPIFIDANFQSTVPGGPIGGQTRVTLRNEHLQYIVTWYGLSAATSYLWFKKFLRGTPGV
Sbjct: 241 AEPIFIDANFQSTVPGGPIGGQTRVTLRNEHLQYIVTWYGLSAATSYLWFKKFLRGTPGV 300


>gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f
           [Homo sapiens]
          Length = 1412

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 17  GRAPASAAWRSVLRVSPRPGVAWRPSR-CGSSAAEASATKAEDDS 60
           G+AP   A  +  + SPR G A  P R  G +AA+    K E+DS
Sbjct: 354 GKAPQVRAASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDS 398


>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
           [Homo sapiens]
          Length = 1451

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 17  GRAPASAAWRSVLRVSPRPGVAWRPSR-CGSSAAEASATKAEDDS 60
           G+AP   A  +  + SPR G A  P R  G +AA+    K E+DS
Sbjct: 431 GKAPQVRAASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDS 475


>gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d
           [Homo sapiens]
          Length = 1488

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 17  GRAPASAAWRSVLRVSPRPGVAWRPSR-CGSSAAEASATKAEDDS 60
           G+AP   A  +  + SPR G A  P R  G +AA+    K E+DS
Sbjct: 431 GKAPQVRAASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDS 475


>gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b
           [Homo sapiens]
          Length = 1411

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 17  GRAPASAAWRSVLRVSPRPGVAWRPSR-CGSSAAEASATKAEDDS 60
           G+AP   A  +  + SPR G A  P R  G +AA+    K E+DS
Sbjct: 354 GKAPQVRAASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDS 398


>gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a
           [Homo sapiens]
          Length = 1450

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 17  GRAPASAAWRSVLRVSPRPGVAWRPSR-CGSSAAEASATKAEDDS 60
           G+AP   A  +  + SPR G A  P R  G +AA+    K E+DS
Sbjct: 431 GKAPQVRAASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDS 475


>gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c
           [Homo sapiens]
          Length = 958

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 17  GRAPASAAWRSVLRVSPRPGVAWRPSR-CGSSAAEASATKAEDDS 60
           G+AP   A  +  + SPR G A  P R  G +AA+    K E+DS
Sbjct: 431 GKAPQVRAASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDS 475


>gi|145279222 WD repeat domain 66 [Homo sapiens]
          Length = 1149

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 14/52 (26%), Positives = 26/52 (50%)

Query: 188 NPETRQKGQIEGEVDLIGMVRLTETRQPFVPENNPERNHWHYRDLEAMARIT 239
           +PE +  G++E + D +    L + R+   PEN  E       D+++ A I+
Sbjct: 173 SPERQPSGELEEKTDRMPQDELGQERRDLEPENREEGQERRVSDIQSKAGIS 224


>gi|239753986 PREDICTED: similar to hCG1989907 [Homo sapiens]
          Length = 229

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 30  RVSPRPGVAWRPSRCGSSAAEASATKAEDDSFLQWVLLLIPVTAFGLGTWQVQRR 84
           R+  +PG   R    G    +  A +    SFL+++LLL+P+    LG W+ +RR
Sbjct: 107 RLPEQPGYRGRRPARGLLHLQPRALRRP--SFLRFLLLLLPLCGGCLGRWRRRRR 159


>gi|239748521 PREDICTED: hypothetical protein XP_002346713 [Homo
           sapiens]
          Length = 229

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 30  RVSPRPGVAWRPSRCGSSAAEASATKAEDDSFLQWVLLLIPVTAFGLGTWQVQRR 84
           R+  +PG   R    G    +  A +    SFL+++LLL+P+    LG W+ +RR
Sbjct: 107 RLPEQPGYRGRRPARGLLHLQPRALRRP--SFLRFLLLLLPLCGGCLGRWRRRRR 159


>gi|239742701 PREDICTED: hypothetical protein XP_002342609 [Homo
           sapiens]
          Length = 192

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 9/70 (12%)

Query: 46  SSAAEASAT--KAEDDSFLQWVL-------LLIPVTAFGLGTWQVQRRKWKLNLIAELES 96
           +SAA  ++T  KA D +FL W+L       + + V+A    ++    R+W++   +    
Sbjct: 40  TSAASRTSTPAKARDGTFLAWLLSASDATTVTVAVSASSQWSFTSTSRRWRVAFASSRVL 99

Query: 97  RVLAEPVPLP 106
            VL  PV  P
Sbjct: 100 VVLISPVQSP 109


>gi|239742492 PREDICTED: hypothetical protein XP_002342529 [Homo
           sapiens]
          Length = 229

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 30  RVSPRPGVAWRPSRCGSSAAEASATKAEDDSFLQWVLLLIPVTAFGLGTWQVQRR 84
           R+  +PG   R    G    +  A +    SFL+++LLL+P+    LG W+ +RR
Sbjct: 107 RLPEQPGYRGRRPARGLLHLQPRALRRP--SFLRFLLLLLPLCGGCLGRWRRRRR 159


>gi|122937211 KIAA0368 protein [Homo sapiens]
          Length = 2017

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 16/116 (13%)

Query: 11  LRAAGLGRAPASAAWRSVLRVSPRPGVAWRPSRC----GSSAAEASATK----------A 56
           LR     R  A+  W      + RPG   RP R     G+ A  A+  +          A
Sbjct: 139 LRLRSEARPRAAGDWPCARGGAVRPGRPHRPPRVESARGAHAGRAATDQLERVFLRLGHA 198

Query: 57  EDDSFLQWVL-LLIPVTAFGLGTWQVQRRKWKLNLIAELESRVLAEP-VPLPADPM 110
           E D  LQ ++   +P     L + Q   RK  + L+  L  R+ + P + LP + +
Sbjct: 199 ETDEQLQNIISKFLPPVLLKLSSTQEGVRKKVMELLVHLNKRIKSRPKIQLPVETL 254


>gi|169636420 carbonic anhydrase IX precursor [Homo sapiens]
          Length = 459

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 7/55 (12%)

Query: 182 VPRKKVNPETRQKGQIEGEVDLIGMVRLTETRQPFVPENNPER-------NHWHY 229
           +P ++  PE + K + EG + L  +  +     P  P+NN  R       +HW Y
Sbjct: 89  LPGEEDLPEVKPKSEEEGSLKLEDLPTVEAPGDPQEPQNNAHRDKEGDDQSHWRY 143


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.135    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,923,878
Number of Sequences: 37866
Number of extensions: 542496
Number of successful extensions: 1368
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1363
Number of HSP's gapped (non-prelim): 14
length of query: 300
length of database: 18,247,518
effective HSP length: 102
effective length of query: 198
effective length of database: 14,385,186
effective search space: 2848266828
effective search space used: 2848266828
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.