Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 4506789

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4506789 diamine N-acetyltransferase 1 [Homo sapiens]
         (171 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4506789 diamine N-acetyltransferase 1 [Homo sapiens]               358   2e-99
gi|19424126 diamine N-acetyltransferase 2 [Homo sapiens]              164   3e-41
gi|61175248 spermidine/spermine N1-acetyl transferase-like 1 [Ho...   115   2e-26
gi|134254455 N-acetyltransferase 15 [Homo sapiens]                     33   0.16 
gi|134254440 N-acetyltransferase 15 [Homo sapiens]                     33   0.16 
gi|13376261 N-acetyltransferase 15 [Homo sapiens]                      33   0.16 
gi|13376735 N-acetyltransferase 13 [Homo sapiens]                      30   1.3  
gi|126517478 peroxidasin homolog-like [Homo sapiens]                   29   1.7  
gi|109150416 peroxidasin [Homo sapiens]                                29   2.3  
gi|33946313 ninein isoform 4 [Homo sapiens]                            28   3.0  
gi|33946321 ninein isoform 5 [Homo sapiens]                            28   3.0  
gi|148536871 ninein isoform 1 [Homo sapiens]                           28   3.0  
gi|148536869 ninein isoform 2 [Homo sapiens]                           28   3.0  
gi|115511046 zinc finger protein 258 [Homo sapiens]                    28   5.0  
gi|153285408 microsomal triglyceride transfer protein large subu...    27   6.6  

>gi|4506789 diamine N-acetyltransferase 1 [Homo sapiens]
          Length = 171

 Score =  358 bits (918), Expect = 2e-99
 Identities = 171/171 (100%), Positives = 171/171 (100%)

Query: 1   MAKFVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFYHCLVAEVP 60
           MAKFVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFYHCLVAEVP
Sbjct: 1   MAKFVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFYHCLVAEVP 60

Query: 61  KEHWTPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRC 120
           KEHWTPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRC
Sbjct: 61  KEHWTPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRC 120

Query: 121 RCSSMHFLVAEWNEPSINFYKRRGASDLSSEEGWRLFKIDKEYLLKMATEE 171
           RCSSMHFLVAEWNEPSINFYKRRGASDLSSEEGWRLFKIDKEYLLKMATEE
Sbjct: 121 RCSSMHFLVAEWNEPSINFYKRRGASDLSSEEGWRLFKIDKEYLLKMATEE 171


>gi|19424126 diamine N-acetyltransferase 2 [Homo sapiens]
          Length = 170

 Score =  164 bits (416), Expect = 3e-41
 Identities = 78/168 (46%), Positives = 109/168 (64%)

Query: 1   MAKFVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFYHCLVAEVP 60
           MA   IR A   DC DILRLI+ELA++E + +QV ++E+ L  DGFG++PFYHCLVAE+ 
Sbjct: 1   MASVRIREAKEGDCGDILRLIRELAEFEKLSDQVKISEEALRADGFGDNPFYHCLVAEIL 60

Query: 61  KEHWTPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRC 120
                  G  +VG+ +YYF Y  W G+ +YLED +VM +YRG GIGS+I+K +++VA+  
Sbjct: 61  PAPGKLLGPCVVGYGIYYFIYSTWKGRTIYLEDIYVMPEYRGQGIGSKIIKKVAEVALDK 120

Query: 121 RCSSMHFLVAEWNEPSINFYKRRGASDLSSEEGWRLFKIDKEYLLKMA 168
            CS     V +WN+ +++ YK  GA DL+  EGW  F    E   K+A
Sbjct: 121 GCSQFRLAVLDWNQRAMDLYKALGAQDLTEAEGWHFFCFQGEATRKLA 168


>gi|61175248 spermidine/spermine N1-acetyl transferase-like 1 [Homo
           sapiens]
          Length = 445

 Score =  115 bits (288), Expect = 2e-26
 Identities = 58/101 (57%), Positives = 70/101 (69%), Gaps = 1/101 (0%)

Query: 1   MAKFVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFYHCLVAEVP 60
           M  F IR A A DC +ILRLIKELA  E M + + LT  DLL DGFG++P ++CL+AEV 
Sbjct: 339 MDYFQIRHAEAGDCPEILRLIKELAACENMLDAMELTAADLLRDGFGDNPLFYCLIAEV- 397

Query: 61  KEHWTPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYR 101
            +   P G   VGFAMYYFTYD W GK+LYLEDF+V   Y+
Sbjct: 398 NDQQKPSGKLTVGFAMYYFTYDSWTGKVLYLEDFYVTQAYQ 438


>gi|134254455 N-acetyltransferase 15 [Homo sapiens]
          Length = 242

 Score = 32.7 bits (73), Expect = 0.16
 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 3/60 (5%)

Query: 87  KLLYLEDFFVMSDYRGFGIGSEILKNLSQ---VAMRCRCSSMHFLVAEWNEPSINFYKRR 143
           ++ Y+    V+ ++R  GIGS +L++L        +  C +++  V   N  +INFY+ R
Sbjct: 94  QVAYILSLGVVKEFRKHGIGSLLLESLKDHISTTAQDHCKAIYLHVLTTNNTAINFYENR 153


>gi|134254440 N-acetyltransferase 15 [Homo sapiens]
          Length = 242

 Score = 32.7 bits (73), Expect = 0.16
 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 3/60 (5%)

Query: 87  KLLYLEDFFVMSDYRGFGIGSEILKNLSQ---VAMRCRCSSMHFLVAEWNEPSINFYKRR 143
           ++ Y+    V+ ++R  GIGS +L++L        +  C +++  V   N  +INFY+ R
Sbjct: 94  QVAYILSLGVVKEFRKHGIGSLLLESLKDHISTTAQDHCKAIYLHVLTTNNTAINFYENR 153


>gi|13376261 N-acetyltransferase 15 [Homo sapiens]
          Length = 242

 Score = 32.7 bits (73), Expect = 0.16
 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 3/60 (5%)

Query: 87  KLLYLEDFFVMSDYRGFGIGSEILKNLSQ---VAMRCRCSSMHFLVAEWNEPSINFYKRR 143
           ++ Y+    V+ ++R  GIGS +L++L        +  C +++  V   N  +INFY+ R
Sbjct: 94  QVAYILSLGVVKEFRKHGIGSLLLESLKDHISTTAQDHCKAIYLHVLTTNNTAINFYENR 153


>gi|13376735 N-acetyltransferase 13 [Homo sapiens]
          Length = 169

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 16/69 (23%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 87  KLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMR-CRCSSMHFLVAEWNEPSINFYKRRGA 145
           K LY+     ++ YR  GIG+++L ++  +  +     +++  V   NE +I+FY++ G 
Sbjct: 70  KRLYIMTLGCLAPYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESAIDFYRKFGF 129

Query: 146 SDLSSEEGW 154
             + +++ +
Sbjct: 130 EIIETKKNY 138


>gi|126517478 peroxidasin homolog-like [Homo sapiens]
          Length = 1463

 Score = 29.3 bits (64), Expect = 1.7
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 7/64 (10%)

Query: 63   HWT-----PEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGF--GIGSEILKNLSQ 115
            HW       E   IVG  + + TY  W+ K+L      ++  YRG+   + + I+ + + 
Sbjct: 991  HWEGNTVYQEARKIVGAELQHITYSHWLPKVLGDPGTRMLRGYRGYNPNVNAGIINSFAT 1050

Query: 116  VAMR 119
             A R
Sbjct: 1051 AAFR 1054


>gi|109150416 peroxidasin [Homo sapiens]
          Length = 1479

 Score = 28.9 bits (63), Expect = 2.3
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%)

Query: 67   EGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGF--GIGSEILKNLSQVAMR 119
            E   IVG  + + TY  W+ K+L       + +Y G+  GI + I    +  A R
Sbjct: 1017 ETRKIVGAEIQHITYQHWLPKILGEVGMRTLGEYHGYDPGINAGIFNAFATAAFR 1071


>gi|33946313 ninein isoform 4 [Homo sapiens]
          Length = 2096

 Score = 28.5 bits (62), Expect = 3.0
 Identities = 12/37 (32%), Positives = 21/37 (56%)

Query: 13  DCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEH 49
           +C++   L+KE  K E     V+  E+++LE  + EH
Sbjct: 874 ECAEAQELLKETLKREKTTSLVLTQEREMLEKTYKEH 910


>gi|33946321 ninein isoform 5 [Homo sapiens]
          Length = 2090

 Score = 28.5 bits (62), Expect = 3.0
 Identities = 12/37 (32%), Positives = 21/37 (56%)

Query: 13  DCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEH 49
           +C++   L+KE  K E     V+  E+++LE  + EH
Sbjct: 868 ECAEAQELLKETLKREKTTSLVLTQEREMLEKTYKEH 904


>gi|148536871 ninein isoform 1 [Homo sapiens]
          Length = 2046

 Score = 28.5 bits (62), Expect = 3.0
 Identities = 12/37 (32%), Positives = 21/37 (56%)

Query: 13  DCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEH 49
           +C++   L+KE  K E     V+  E+++LE  + EH
Sbjct: 868 ECAEAQELLKETLKREKTTSLVLTQEREMLEKTYKEH 904


>gi|148536869 ninein isoform 2 [Homo sapiens]
          Length = 2133

 Score = 28.5 bits (62), Expect = 3.0
 Identities = 12/37 (32%), Positives = 21/37 (56%)

Query: 13  DCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEH 49
           +C++   L+KE  K E     V+  E+++LE  + EH
Sbjct: 868 ECAEAQELLKETLKREKTTSLVLTQEREMLEKTYKEH 904


>gi|115511046 zinc finger protein 258 [Homo sapiens]
          Length = 1325

 Score = 27.7 bits (60), Expect = 5.0
 Identities = 10/18 (55%), Positives = 12/18 (66%)

Query: 78   YFTYDPWIGKLLYLEDFF 95
            YF  + W+GKL YL D F
Sbjct: 1103 YFHDEEWVGKLAYLSDIF 1120


>gi|153285408 microsomal triglyceride transfer protein large subunit
           precursor [Homo sapiens]
          Length = 894

 Score = 27.3 bits (59), Expect = 6.6
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)

Query: 5   VIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFYHCLVAEVPK 61
           ++   T+A  SD L  I +   ++  +  +IL E+ L   GF  HP    L A + K
Sbjct: 359 LVDAVTSAQTSDSLEAILDFLDFK-SDSSIILQERFLYACGFASHPNEELLRALISK 414


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.139    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,421,893
Number of Sequences: 37866
Number of extensions: 267319
Number of successful extensions: 478
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 462
Number of HSP's gapped (non-prelim): 19
length of query: 171
length of database: 18,247,518
effective HSP length: 95
effective length of query: 76
effective length of database: 14,650,248
effective search space: 1113418848
effective search space used: 1113418848
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press