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Search of human proteins with 4505529
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4505529 orosomucoid 2 [Homo sapiens]
(201 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4505529 orosomucoid 2 [Homo sapiens] 419 e-117
gi|167857790 orosomucoid 1 precursor [Homo sapiens] 377 e-105
gi|224451131 eyes shut homolog isoform 2 [Homo sapiens] 31 0.62
gi|224451128 eyes shut homolog isoform 1 [Homo sapiens] 31 0.62
gi|38093661 eyes shut homolog isoform 3 [Homo sapiens] 31 0.62
gi|223633939 solute carrier family 39 (zinc transporter), member... 31 0.81
gi|223633937 solute carrier family 39 (zinc transporter), member... 31 0.81
gi|7662302 TBK1 binding protein 1 [Homo sapiens] 30 1.4
gi|118150654 non-protein coding RNA 153 isoform 1 [Homo sapiens] 30 1.8
gi|4505445 neuropeptide Y receptor Y1 [Homo sapiens] 30 1.8
gi|14210520 solute carrier family 30, member 2 isoform 2 [Homo s... 30 1.8
gi|52352805 solute carrier family 30, member 2 isoform 1 [Homo s... 30 1.8
gi|76159293 thioesterase superfamily member 4 [Homo sapiens] 28 6.9
>gi|4505529 orosomucoid 2 [Homo sapiens]
Length = 201
Score = 419 bits (1076), Expect = e-117
Identities = 201/201 (100%), Positives = 201/201 (100%)
Query: 1 MALSWVLTVLSLLPLLEAQIPLCANLVPVPITNATLDRITGKWFYIASAFRNEEYNKSVQ 60
MALSWVLTVLSLLPLLEAQIPLCANLVPVPITNATLDRITGKWFYIASAFRNEEYNKSVQ
Sbjct: 1 MALSWVLTVLSLLPLLEAQIPLCANLVPVPITNATLDRITGKWFYIASAFRNEEYNKSVQ 60
Query: 61 EIQATFFYFTPNKTEDTIFLREYQTRQNQCFYNSSYLNVQRENGTVSRYEGGREHVAHLL 120
EIQATFFYFTPNKTEDTIFLREYQTRQNQCFYNSSYLNVQRENGTVSRYEGGREHVAHLL
Sbjct: 61 EIQATFFYFTPNKTEDTIFLREYQTRQNQCFYNSSYLNVQRENGTVSRYEGGREHVAHLL 120
Query: 121 FLRDTKTLMFGSYLDDEKNWGLSFYADKPETTKEQLGEFYEALDCLCIPRSDVMYTDWKK 180
FLRDTKTLMFGSYLDDEKNWGLSFYADKPETTKEQLGEFYEALDCLCIPRSDVMYTDWKK
Sbjct: 121 FLRDTKTLMFGSYLDDEKNWGLSFYADKPETTKEQLGEFYEALDCLCIPRSDVMYTDWKK 180
Query: 181 DKCEPLEKQHEKERKQEEGES 201
DKCEPLEKQHEKERKQEEGES
Sbjct: 181 DKCEPLEKQHEKERKQEEGES 201
>gi|167857790 orosomucoid 1 precursor [Homo sapiens]
Length = 201
Score = 377 bits (969), Expect = e-105
Identities = 181/201 (90%), Positives = 190/201 (94%)
Query: 1 MALSWVLTVLSLLPLLEAQIPLCANLVPVPITNATLDRITGKWFYIASAFRNEEYNKSVQ 60
MALSWVLTVLSLLPLLEAQIPLCANLVPVPITNATLDRITGKWFYIASAFRNEEYNKSVQ
Sbjct: 1 MALSWVLTVLSLLPLLEAQIPLCANLVPVPITNATLDRITGKWFYIASAFRNEEYNKSVQ 60
Query: 61 EIQATFFYFTPNKTEDTIFLREYQTRQNQCFYNSSYLNVQRENGTVSRYEGGREHVAHLL 120
EIQATFFYFTPNKTEDTIFLREYQTRQ+QC YN++YLNVQRENGT+SRY GG+EH AHLL
Sbjct: 61 EIQATFFYFTPNKTEDTIFLREYQTRQDQCIYNTTYLNVQRENGTISRYVGGQEHFAHLL 120
Query: 121 FLRDTKTLMFGSYLDDEKNWGLSFYADKPETTKEQLGEFYEALDCLCIPRSDVMYTDWKK 180
LRDTKT M ++DEKNWGLS YADKPETTKEQLGEFYEALDCL IP+SDV+YTDWKK
Sbjct: 121 ILRDTKTYMLAFDVNDEKNWGLSVYADKPETTKEQLGEFYEALDCLRIPKSDVVYTDWKK 180
Query: 181 DKCEPLEKQHEKERKQEEGES 201
DKCEPLEKQHEKERKQEEGES
Sbjct: 181 DKCEPLEKQHEKERKQEEGES 201
>gi|224451131 eyes shut homolog isoform 2 [Homo sapiens]
Length = 619
Score = 31.2 bits (69), Expect = 0.62
Identities = 17/80 (21%), Positives = 33/80 (41%)
Query: 60 QEIQATFFYFTPNKTEDTIFLREYQTRQNQCFYNSSYLNVQRENGTVSRYEGGREHVAHL 119
Q + +F+ N TED ++ + + + C++ NG E + +L
Sbjct: 494 QGVIDAYFFLAANCTEDATYVNDPEDNNSSCWFPHEGTKEICANGCSCLSEEDSQEYRYL 553
Query: 120 LFLRDTKTLMFGSYLDDEKN 139
FLR + + DD++N
Sbjct: 554 CFLRWAGNMYLENTTDDQEN 573
>gi|224451128 eyes shut homolog isoform 1 [Homo sapiens]
Length = 3144
Score = 31.2 bits (69), Expect = 0.62
Identities = 17/80 (21%), Positives = 33/80 (41%)
Query: 60 QEIQATFFYFTPNKTEDTIFLREYQTRQNQCFYNSSYLNVQRENGTVSRYEGGREHVAHL 119
Q + +F+ N TED ++ + + + C++ NG E + +L
Sbjct: 494 QGVIDAYFFLAANCTEDATYVNDPEDNNSSCWFPHEGTKEICANGCSCLSEEDSQEYRYL 553
Query: 120 LFLRDTKTLMFGSYLDDEKN 139
FLR + + DD++N
Sbjct: 554 CFLRWAGNMYLENTTDDQEN 573
>gi|38093661 eyes shut homolog isoform 3 [Homo sapiens]
Length = 594
Score = 31.2 bits (69), Expect = 0.62
Identities = 17/80 (21%), Positives = 33/80 (41%)
Query: 60 QEIQATFFYFTPNKTEDTIFLREYQTRQNQCFYNSSYLNVQRENGTVSRYEGGREHVAHL 119
Q + +F+ N TED ++ + + + C++ NG E + +L
Sbjct: 494 QGVIDAYFFLAANCTEDATYVNDPEDNNSSCWFPHEGTKEICANGCSCLSEEDSQEYRYL 553
Query: 120 LFLRDTKTLMFGSYLDDEKN 139
FLR + + DD++N
Sbjct: 554 CFLRWAGNMYLENTTDDQEN 573
>gi|223633939 solute carrier family 39 (zinc transporter), member 12
isoform 1 [Homo sapiens]
Length = 691
Score = 30.8 bits (68), Expect = 0.81
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 22/136 (16%)
Query: 68 YFTPNKTEDTI-FLREY-QTRQNQCFYNSSYLNVQRENGTVSRYEGGRE----HVAHLLF 121
+ + N+TED + F R+Y T Q+QC + +Q+++G VS EG E +A ++
Sbjct: 158 FLSQNETEDILAFTRQYFDTSQSQCMETKT---LQKKSGIVSS-EGANESTLPQLAAMII 213
Query: 122 LRDTKTLMFGS-YLDDEKNWGLSFYADKPETTKEQLGEFYEALDCLCIPRSDVMYTDWKK 180
+ + G L + ++ T +L E + L+ L W +
Sbjct: 214 TLSLQGVCLGQGNLPSPDYFTEYIFSSLNRTNTLRLSELDQLLNTL-----------WTR 262
Query: 181 DKCEPLEKQHEKERKQ 196
C EK H+ +RKQ
Sbjct: 263 STCIKNEKIHQFQRKQ 278
>gi|223633937 solute carrier family 39 (zinc transporter), member 12
isoform 2 [Homo sapiens]
Length = 654
Score = 30.8 bits (68), Expect = 0.81
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 22/136 (16%)
Query: 68 YFTPNKTEDTI-FLREY-QTRQNQCFYNSSYLNVQRENGTVSRYEGGRE----HVAHLLF 121
+ + N+TED + F R+Y T Q+QC + +Q+++G VS EG E +A ++
Sbjct: 158 FLSQNETEDILAFTRQYFDTSQSQCMETKT---LQKKSGIVSS-EGANESTLPQLAAMII 213
Query: 122 LRDTKTLMFGS-YLDDEKNWGLSFYADKPETTKEQLGEFYEALDCLCIPRSDVMYTDWKK 180
+ + G L + ++ T +L E + L+ L W +
Sbjct: 214 TLSLQGVCLGQGNLPSPDYFTEYIFSSLNRTNTLRLSELDQLLNTL-----------WTR 262
Query: 181 DKCEPLEKQHEKERKQ 196
C EK H+ +RKQ
Sbjct: 263 STCIKNEKIHQFQRKQ 278
>gi|7662302 TBK1 binding protein 1 [Homo sapiens]
Length = 615
Score = 30.0 bits (66), Expect = 1.4
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 12/87 (13%)
Query: 99 VQRENGTVSR----YE--------GGREHVAHLLFLRDTKTLMFGSYLDDEKNWGLSFYA 146
++REN T+ R YE G EH L ++D L ++
Sbjct: 58 LERENATLRRRLKVYEIKYPLISDFGEEHGFSLYEIKDGSLLEVEKVSLQQRLNQFQHEL 117
Query: 147 DKPETTKEQLGEFYEALDCLCIPRSDV 173
K + +EQLGE +A + LC+ +SD+
Sbjct: 118 QKNKEQEEQLGEMIQAYEKLCVEKSDL 144
>gi|118150654 non-protein coding RNA 153 isoform 1 [Homo sapiens]
Length = 673
Score = 29.6 bits (65), Expect = 1.8
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 51 RNEEYNKSVQEIQATFFYFTPNKTEDTIFLREYQTRQNQCFYNSSYLNVQRE 102
RN+EY K + +QA +FT N + EY+T+ + + L ++ E
Sbjct: 76 RNQEYLKRFERVQAHVVHFTTNTEKLQKLKLEYETQIKKMLCSKDSLGLKEE 127
>gi|4505445 neuropeptide Y receptor Y1 [Homo sapiens]
Length = 384
Score = 29.6 bits (65), Expect = 1.8
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Query: 1 MALSWVLTVLSLLPLLEAQIPLCANLVPVPITNATLDRITGKWFYIASAFRNEEYNKSVQ 60
+A+ WVL V S LP L Q+ + P N TLD K + F ++ + S
Sbjct: 159 IAVIWVLAVASSLPFLIYQV-----MTDEPFQNVTLDAYKDK-YVCFDQFPSDSHRLSYT 212
Query: 61 EIQATFFYFTP 71
+ YF P
Sbjct: 213 TLLLVLQYFGP 223
>gi|14210520 solute carrier family 30, member 2 isoform 2 [Homo
sapiens]
Length = 323
Score = 29.6 bits (65), Expect = 1.8
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 5 WVLTVLSLLPLLEAQIPLCANLVPVPITNATLDRITGKWFYIASAFRNEEYNKSVQEIQA 64
W LTV P+L I + N + R+ GK+ + + E+Y++ +++ QA
Sbjct: 260 WALTVAQ--PVLSVHIAIAQNTDAQAVLKTASSRLQGKFHFHTVTIQIEDYSEDMKDCQA 317
>gi|52352805 solute carrier family 30, member 2 isoform 1 [Homo
sapiens]
Length = 372
Score = 29.6 bits (65), Expect = 1.8
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 5 WVLTVLSLLPLLEAQIPLCANLVPVPITNATLDRITGKWFYIASAFRNEEYNKSVQEIQA 64
W LTV P+L I + N + R+ GK+ + + E+Y++ +++ QA
Sbjct: 309 WALTVAQ--PVLSVHIAIAQNTDAQAVLKTASSRLQGKFHFHTVTIQIEDYSEDMKDCQA 366
>gi|76159293 thioesterase superfamily member 4 [Homo sapiens]
Length = 240
Score = 27.7 bits (60), Expect = 6.9
Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 20 IPLCANLVPVPITNATLDRITGKWFYIASAFRNEEYNKSVQEIQATFFYFTPNKT 74
IPLC+ V + N+ LD++ G+ F+++ ++ + E + F P K+
Sbjct: 188 IPLCS----VVMINSQLDKVEGRKFFVSCNVQSVDEKTLYSEATSLFIKLNPAKS 238
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,715,759
Number of Sequences: 37866
Number of extensions: 326222
Number of successful extensions: 1064
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1060
Number of HSP's gapped (non-prelim): 13
length of query: 201
length of database: 18,247,518
effective HSP length: 97
effective length of query: 104
effective length of database: 14,574,516
effective search space: 1515749664
effective search space used: 1515749664
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.