Search of human proteins with 4505495

Search of human proteins with 4505495

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4505495 8-oxoguanine DNA-glycosylase 1 isoform 1a [Homo
sapiens]
         (345 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4505495 8-oxoguanine DNA-glycosylase 1 isoform 1a [Homo sapiens]   715   0.0  
gi|8670540 8-oxoguanine DNA-glycosylase 1 isoform 2d [Homo sapiens]   659   0.0  
gi|8670530 8-oxoguanine DNA-glycosylase 1 isoform 1b [Homo sapiens]   659   0.0  
gi|8670534 8-oxoguanine DNA-glycosylase 1 isoform 2a [Homo sapiens]   658   0.0  
gi|8670542 8-oxoguanine DNA-glycosylase 1 isoform 2e [Homo sapiens]   657   0.0  
gi|8670532 8-oxoguanine DNA-glycosylase 1 isoform 1c [Homo sapiens]   657   0.0  
gi|8670536 8-oxoguanine DNA-glycosylase 1 isoform 2b [Homo sapiens]   510   e-145
gi|8670538 8-oxoguanine DNA-glycosylase 1 isoform 2c [Homo sapiens]   395   e-110
gi|4505471 nth endonuclease III-like 1 [Homo sapiens]                  31   1.9  
gi|94966752 elongation factor Tu GTP binding domain containing 1...    31   1.9  
gi|94966754 elongation factor Tu GTP binding domain containing 1...    31   1.9  
gi|11034811 catenin (cadherin-associated protein), delta 2 (neur...    30   2.4  
gi|21630285 PDZ domain containing 3 [Homo sapiens]                     30   3.2  
gi|4826665 copper chaperone for superoxide dismutase [Homo sapiens]    30   4.1  
gi|228008400 synaptotagmin binding, cytoplasmic RNA interacting ...    28   9.2  
gi|228008398 synaptotagmin binding, cytoplasmic RNA interacting ...    28   9.2  
gi|228008295 synaptotagmin binding, cytoplasmic RNA interacting ...    28   9.2  
gi|228008293 synaptotagmin binding, cytoplasmic RNA interacting ...    28   9.2  
gi|228008291 synaptotagmin binding, cytoplasmic RNA interacting ...    28   9.2  
gi|117422433 kallikrein-related peptidase 10 preproprotein [Homo...    28   9.2  
gi|22208984 kallikrein-related peptidase 10 preproprotein [Homo ...    28   9.2  
gi|22208982 kallikrein-related peptidase 10 preproprotein [Homo ...    28   9.2  

>gi|4505495 8-oxoguanine DNA-glycosylase 1 isoform 1a [Homo sapiens]
          Length = 345

 Score =  715 bits (1846), Expect = 0.0
 Identities = 345/345 (100%), Positives = 345/345 (100%)

Query: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60
           MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
Sbjct: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60

Query: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120
           DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
Sbjct: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120

Query: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180
           QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
Sbjct: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180

Query: 181 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL 240
           FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
Sbjct: 181 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL 240

Query: 241 CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG 300
           CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG
Sbjct: 241 CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG 300

Query: 301 NFFRSLWGPYAGWAQAVLFSADLRQSRHAQEPPAKRRKGSKGPEG 345
           NFFRSLWGPYAGWAQAVLFSADLRQSRHAQEPPAKRRKGSKGPEG
Sbjct: 301 NFFRSLWGPYAGWAQAVLFSADLRQSRHAQEPPAKRRKGSKGPEG 345


>gi|8670540 8-oxoguanine DNA-glycosylase 1 isoform 2d [Homo sapiens]
          Length = 356

 Score =  659 bits (1701), Expect = 0.0
 Identities = 323/345 (93%), Positives = 326/345 (94%), Gaps = 5/345 (1%)

Query: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60
           MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
Sbjct: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60

Query: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120
           DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
Sbjct: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120

Query: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180
           QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
Sbjct: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180

Query: 181 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL 240
           FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
Sbjct: 181 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL 240

Query: 241 CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG 300
           CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG
Sbjct: 241 CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG 300

Query: 301 NFFRSLWGPYAGWAQAV-----LFSADLRQSRHAQEPPAKRRKGS 340
           NFFRSLWGPYAGWAQA+      F   L   R  Q PP + +  S
Sbjct: 301 NFFRSLWGPYAGWAQALCQVITTFMTFLGPHRLDQMPPEELQTSS 345


>gi|8670530 8-oxoguanine DNA-glycosylase 1 isoform 1b [Homo sapiens]
          Length = 324

 Score =  659 bits (1700), Expect = 0.0
 Identities = 317/317 (100%), Positives = 317/317 (100%)

Query: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60
           MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
Sbjct: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60

Query: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120
           DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
Sbjct: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120

Query: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180
           QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
Sbjct: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180

Query: 181 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL 240
           FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
Sbjct: 181 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL 240

Query: 241 CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG 300
           CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG
Sbjct: 241 CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG 300

Query: 301 NFFRSLWGPYAGWAQAV 317
           NFFRSLWGPYAGWAQAV
Sbjct: 301 NFFRSLWGPYAGWAQAV 317


>gi|8670534 8-oxoguanine DNA-glycosylase 1 isoform 2a [Homo sapiens]
          Length = 424

 Score =  658 bits (1698), Expect = 0.0
 Identities = 326/354 (92%), Positives = 329/354 (92%), Gaps = 10/354 (2%)

Query: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60
           MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
Sbjct: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60

Query: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120
           DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
Sbjct: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120

Query: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180
           QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
Sbjct: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180

Query: 181 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL 240
           FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
Sbjct: 181 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL 240

Query: 241 CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG 300
           CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG
Sbjct: 241 CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG 300

Query: 301 NFFRSLWGPYAGWAQAVLF--SADLRQ--------SRHAQEPPAKRRKGSKGPE 344
           NFFRSLWGPYAGWAQA L   + D  Q          H +E P   R  S+G E
Sbjct: 301 NFFRSLWGPYAGWAQAGLLGNAFDGHQLLRPLIFCQDHLREGPPIGRGDSQGEE 354


>gi|8670542 8-oxoguanine DNA-glycosylase 1 isoform 2e [Homo sapiens]
          Length = 322

 Score =  657 bits (1696), Expect = 0.0
 Identities = 316/316 (100%), Positives = 316/316 (100%)

Query: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60
           MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
Sbjct: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60

Query: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120
           DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
Sbjct: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120

Query: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180
           QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
Sbjct: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180

Query: 181 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL 240
           FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
Sbjct: 181 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL 240

Query: 241 CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG 300
           CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG
Sbjct: 241 CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG 300

Query: 301 NFFRSLWGPYAGWAQA 316
           NFFRSLWGPYAGWAQA
Sbjct: 301 NFFRSLWGPYAGWAQA 316


>gi|8670532 8-oxoguanine DNA-glycosylase 1 isoform 1c [Homo sapiens]
          Length = 410

 Score =  657 bits (1696), Expect = 0.0
 Identities = 316/316 (100%), Positives = 316/316 (100%)

Query: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60
           MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
Sbjct: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60

Query: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120
           DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
Sbjct: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120

Query: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180
           QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
Sbjct: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180

Query: 181 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL 240
           FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
Sbjct: 181 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL 240

Query: 241 CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG 300
           CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG
Sbjct: 241 CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG 300

Query: 301 NFFRSLWGPYAGWAQA 316
           NFFRSLWGPYAGWAQA
Sbjct: 301 NFFRSLWGPYAGWAQA 316


>gi|8670536 8-oxoguanine DNA-glycosylase 1 isoform 2b [Homo sapiens]
          Length = 357

 Score =  510 bits (1314), Expect = e-145
 Identities = 249/249 (100%), Positives = 249/249 (100%)

Query: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60
           MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
Sbjct: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60

Query: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120
           DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
Sbjct: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120

Query: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180
           QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
Sbjct: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180

Query: 181 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL 240
           FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
Sbjct: 181 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL 240

Query: 241 CILPGVGTK 249
           CILPGVGTK
Sbjct: 241 CILPGVGTK 249


>gi|8670538 8-oxoguanine DNA-glycosylase 1 isoform 2c [Homo sapiens]
          Length = 195

 Score =  395 bits (1015), Expect = e-110
 Identities = 190/190 (100%), Positives = 190/190 (100%)

Query: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60
           MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
Sbjct: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60

Query: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120
           DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
Sbjct: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120

Query: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180
           QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
Sbjct: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180

Query: 181 FPSLQALAGP 190
           FPSLQALAGP
Sbjct: 181 FPSLQALAGP 190


>gi|4505471 nth endonuclease III-like 1 [Homo sapiens]
          Length = 312

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 5/86 (5%)

Query: 223 AWLQQLRESSYEEAHKALCILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWH 282
           A LQQ        +   L  LPGVG K+A     +A      + VD H+  IA R   W 
Sbjct: 194 AILQQHYGGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANR-LRW- 251

Query: 283 PTTSQAKGPSPQTNKELGNFF-RSLW 307
             T +A     +T   L  +  R LW
Sbjct: 252 --TKKATKSPEETRAALEEWLPRELW 275


>gi|94966752 elongation factor Tu GTP binding domain containing 1
            isoform 2 [Homo sapiens]
          Length = 1069

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 17/74 (22%)

Query: 38   VLPSGQSFRWREQ---------SP----AHWSGVLADQVWTLTQTEEQLHCTVYRGDKSQ 84
            VLP  +SF + ++         SP    +HW  + +D  W  T  EE LH     G+K+ 
Sbjct: 976  VLPVAESFGFADEIRKRTSGLASPQLVFSHWEIIPSDPFWVPTTEEEYLHF----GEKAD 1031

Query: 85   ASRPTPDELEAVRK 98
            +       + AVRK
Sbjct: 1032 SENQARKYMNAVRK 1045


>gi|94966754 elongation factor Tu GTP binding domain containing 1
            isoform 1 [Homo sapiens]
          Length = 1120

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 17/74 (22%)

Query: 38   VLPSGQSFRWREQ---------SP----AHWSGVLADQVWTLTQTEEQLHCTVYRGDKSQ 84
            VLP  +SF + ++         SP    +HW  + +D  W  T  EE LH     G+K+ 
Sbjct: 1027 VLPVAESFGFADEIRKRTSGLASPQLVFSHWEIIPSDPFWVPTTEEEYLHF----GEKAD 1082

Query: 85   ASRPTPDELEAVRK 98
            +       + AVRK
Sbjct: 1083 SENQARKYMNAVRK 1096


>gi|11034811 catenin (cadherin-associated protein), delta 2 (neural
           plakophilin-related arm-repeat protein) [Homo sapiens]
          Length = 1225

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 10/74 (13%)

Query: 168 PRLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQ 227
           P L ++  +  H FPS+Q+ A     A+L+ L  G          +A +  QGG+  L  
Sbjct: 550 PELPEVIQMLQHQFPSVQSNAA----AYLQHLCFG------DNKIKAEIRRQGGIQLLVD 599

Query: 228 LRESSYEEAHKALC 241
           L +    E H++ C
Sbjct: 600 LLDHRMTEVHRSAC 613


>gi|21630285 PDZ domain containing 3 [Homo sapiens]
          Length = 491

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 17/45 (37%), Positives = 24/45 (53%)

Query: 157 GMVERLCQAFGPRLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGL 201
           G  ER     G RL++++ +   G      +AGPEVE   R+LGL
Sbjct: 187 GAAERAGVPPGARLLEVNGLWQSGQQVTLLVAGPEVEEQCRQLGL 231


>gi|4826665 copper chaperone for superoxide dismutase [Homo sapiens]
          Length = 274

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)

Query: 183 SLQALAG-PEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKALC 241
           SLQ +AG  +VE HL    +       S   +A+LE  G  A L+ +     +    A+ 
Sbjct: 32  SLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGSGQLQNLGAAVA 91

Query: 242 ILPGVGT 248
           IL G GT
Sbjct: 92  ILGGPGT 98


>gi|228008400 synaptotagmin binding, cytoplasmic RNA interacting
           protein isoform 6 [Homo sapiens]
          Length = 562

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 29/98 (29%), Positives = 35/98 (35%), Gaps = 19/98 (19%)

Query: 218 EQGGLAWLQQLRESSYEEAHKALCILPGV----------GTKVADC------ICLMALDK 261
           E G LA LQQ ++S           L GV          GTKVAD         + AL +
Sbjct: 70  EDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPDEAKIKALLE 129

Query: 262 PQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKEL 299
                +DV      QR Y   P  S   G  P    E+
Sbjct: 130 RTGYTLDV---TTGQRKYGGPPPDSVYSGQQPSVGTEI 164


>gi|228008398 synaptotagmin binding, cytoplasmic RNA interacting
           protein isoform 3 [Homo sapiens]
          Length = 527

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 29/98 (29%), Positives = 35/98 (35%), Gaps = 19/98 (19%)

Query: 218 EQGGLAWLQQLRESSYEEAHKALCILPGV----------GTKVADC------ICLMALDK 261
           E G LA LQQ ++S           L GV          GTKVAD         + AL +
Sbjct: 70  EDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPDEAKIKALLE 129

Query: 262 PQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKEL 299
                +DV      QR Y   P  S   G  P    E+
Sbjct: 130 RTGYTLDV---TTGQRKYGGPPPDSVYSGQQPSVGTEI 164


>gi|228008295 synaptotagmin binding, cytoplasmic RNA interacting
           protein isoform 4 [Homo sapiens]
          Length = 588

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 29/98 (29%), Positives = 35/98 (35%), Gaps = 19/98 (19%)

Query: 218 EQGGLAWLQQLRESSYEEAHKALCILPGV----------GTKVADC------ICLMALDK 261
           E G LA LQQ ++S           L GV          GTKVAD         + AL +
Sbjct: 70  EDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPDEAKIKALLE 129

Query: 262 PQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKEL 299
                +DV      QR Y   P  S   G  P    E+
Sbjct: 130 RTGYTLDV---TTGQRKYGGPPPDSVYSGQQPSVGTEI 164


>gi|228008293 synaptotagmin binding, cytoplasmic RNA interacting
           protein isoform 5 [Homo sapiens]
          Length = 561

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 29/98 (29%), Positives = 35/98 (35%), Gaps = 19/98 (19%)

Query: 218 EQGGLAWLQQLRESSYEEAHKALCILPGV----------GTKVADC------ICLMALDK 261
           E G LA LQQ ++S           L GV          GTKVAD         + AL +
Sbjct: 70  EDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPDEAKIKALLE 129

Query: 262 PQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKEL 299
                +DV      QR Y   P  S   G  P    E+
Sbjct: 130 RTGYTLDV---TTGQRKYGGPPPDSVYSGQQPSVGTEI 164


>gi|228008291 synaptotagmin binding, cytoplasmic RNA interacting
           protein isoform 1 [Homo sapiens]
          Length = 623

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 29/98 (29%), Positives = 35/98 (35%), Gaps = 19/98 (19%)

Query: 218 EQGGLAWLQQLRESSYEEAHKALCILPGV----------GTKVADC------ICLMALDK 261
           E G LA LQQ ++S           L GV          GTKVAD         + AL +
Sbjct: 70  EDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPDEAKIKALLE 129

Query: 262 PQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKEL 299
                +DV      QR Y   P  S   G  P    E+
Sbjct: 130 RTGYTLDV---TTGQRKYGGPPPDSVYSGQQPSVGTEI 164


>gi|117422433 kallikrein-related peptidase 10 preproprotein [Homo
           sapiens]
          Length = 276

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 16/67 (23%)

Query: 27  PCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLADQVWTLTQTEEQLHCTVYRGDKSQAS 86
           PC R      + L +G SF        H +GVL DQ W LT      HC    G+K   +
Sbjct: 51  PCARGSQPWQVSLFNGLSF--------HCAGVLVDQSWVLTAA----HC----GNKPLWA 94

Query: 87  RPTPDEL 93
           R   D L
Sbjct: 95  RVGDDHL 101


>gi|22208984 kallikrein-related peptidase 10 preproprotein [Homo
           sapiens]
          Length = 276

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 16/67 (23%)

Query: 27  PCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLADQVWTLTQTEEQLHCTVYRGDKSQAS 86
           PC R      + L +G SF        H +GVL DQ W LT      HC    G+K   +
Sbjct: 51  PCARGSQPWQVSLFNGLSF--------HCAGVLVDQSWVLTAA----HC----GNKPLWA 94

Query: 87  RPTPDEL 93
           R   D L
Sbjct: 95  RVGDDHL 101


>gi|22208982 kallikrein-related peptidase 10 preproprotein [Homo
           sapiens]
          Length = 276

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 16/67 (23%)

Query: 27  PCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLADQVWTLTQTEEQLHCTVYRGDKSQAS 86
           PC R      + L +G SF        H +GVL DQ W LT      HC    G+K   +
Sbjct: 51  PCARGSQPWQVSLFNGLSF--------HCAGVLVDQSWVLTAA----HC----GNKPLWA 94

Query: 87  RPTPDEL 93
           R   D L
Sbjct: 95  RVGDDHL 101


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.134    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,721,214
Number of Sequences: 37866
Number of extensions: 670963
Number of successful extensions: 1439
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1429
Number of HSP's gapped (non-prelim): 22
length of query: 345
length of database: 18,247,518
effective HSP length: 103
effective length of query: 242
effective length of database: 14,347,320
effective search space: 3472051440
effective search space used: 3472051440
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.