BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|4504333 histidine ammonia-lyase [Homo sapiens] (657 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|4504333 histidine ammonia-lyase [Homo sapiens] 1310 0.0 gi|119120907 par-3 partitioning defective 3 homolog B isoform a ... 36 0.098 gi|119120903 par-3 partitioning defective 3 homolog B isoform c ... 36 0.098 gi|119120897 par-3 partitioning defective 3 homolog B isoform b ... 36 0.098 gi|16445033 ACRC protein [Homo sapiens] 34 0.37 gi|16933565 protocadherin 21 precursor [Homo sapiens] 34 0.49 gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens] 33 1.1 gi|48928029 trafficking protein particle complex 10 [Homo sapiens] 32 1.4 gi|24497531 Ellis van Creveld syndrome protein [Homo sapiens] 31 4.1 gi|17196626 patatin-like phospholipase domain containing 3 [Homo... 30 5.4 >gi|4504333 histidine ammonia-lyase [Homo sapiens] Length = 657 Score = 1310 bits (3389), Expect = 0.0 Identities = 657/657 (100%), Positives = 657/657 (100%) Query: 1 MPRYTVHVRGEWLAVPCQDAQLTVGWLGREAVRRYIKNKPDNGGFTSVDDAHFLVRRCKG 60 MPRYTVHVRGEWLAVPCQDAQLTVGWLGREAVRRYIKNKPDNGGFTSVDDAHFLVRRCKG Sbjct: 1 MPRYTVHVRGEWLAVPCQDAQLTVGWLGREAVRRYIKNKPDNGGFTSVDDAHFLVRRCKG 60 Query: 61 LGLLDNEDRLEVALENNEFVEVVIEGDAMSPDFIPSQPEGVYLYSKYREPEKYIELDGDR 120 LGLLDNEDRLEVALENNEFVEVVIEGDAMSPDFIPSQPEGVYLYSKYREPEKYIELDGDR Sbjct: 61 LGLLDNEDRLEVALENNEFVEVVIEGDAMSPDFIPSQPEGVYLYSKYREPEKYIELDGDR 120 Query: 121 LTTEDLVNLGKGRYKIKLTPTAEKRVQKSREVIDSIIKEKTVVYGITTGFGKFARTVIPI 180 LTTEDLVNLGKGRYKIKLTPTAEKRVQKSREVIDSIIKEKTVVYGITTGFGKFARTVIPI Sbjct: 121 LTTEDLVNLGKGRYKIKLTPTAEKRVQKSREVIDSIIKEKTVVYGITTGFGKFARTVIPI 180 Query: 181 NKLQELQVNLVRSHSSGVGKPLSPERCRMLLALRINVLAKGYSGISLETLKQVIEMFNAS 240 NKLQELQVNLVRSHSSGVGKPLSPERCRMLLALRINVLAKGYSGISLETLKQVIEMFNAS Sbjct: 181 NKLQELQVNLVRSHSSGVGKPLSPERCRMLLALRINVLAKGYSGISLETLKQVIEMFNAS 240 Query: 241 CLPYVPEKGTVGASGDLAPLSHLALGLVGEGKMWSPKSGWADAKYVLEAHGLKPVILKPK 300 CLPYVPEKGTVGASGDLAPLSHLALGLVGEGKMWSPKSGWADAKYVLEAHGLKPVILKPK Sbjct: 241 CLPYVPEKGTVGASGDLAPLSHLALGLVGEGKMWSPKSGWADAKYVLEAHGLKPVILKPK 300 Query: 301 EGLALINGTQMITSLGCEAVERASAIARQADIVAALTLEVLKGTTKAFDTDIHALRPHRG 360 EGLALINGTQMITSLGCEAVERASAIARQADIVAALTLEVLKGTTKAFDTDIHALRPHRG Sbjct: 301 EGLALINGTQMITSLGCEAVERASAIARQADIVAALTLEVLKGTTKAFDTDIHALRPHRG 360 Query: 361 QIEVAFRFRSLLDSDHHPSEIAESHRFCDRVQDAYTLRCCPQVHGVVNDTIAFVKNIITT 420 QIEVAFRFRSLLDSDHHPSEIAESHRFCDRVQDAYTLRCCPQVHGVVNDTIAFVKNIITT Sbjct: 361 QIEVAFRFRSLLDSDHHPSEIAESHRFCDRVQDAYTLRCCPQVHGVVNDTIAFVKNIITT 420 Query: 421 ELNSATDNPMVFANRGETVSGGNFHGEYPAKALDYLAIGIHELAAISERRIERLCNPSLS 480 ELNSATDNPMVFANRGETVSGGNFHGEYPAKALDYLAIGIHELAAISERRIERLCNPSLS Sbjct: 421 ELNSATDNPMVFANRGETVSGGNFHGEYPAKALDYLAIGIHELAAISERRIERLCNPSLS 480 Query: 481 ELPAFLVAEGGLNSGFMIAHCTAAALVSENKALCHPSSVDSLSTSAATEDHVSMGGWAAR 540 ELPAFLVAEGGLNSGFMIAHCTAAALVSENKALCHPSSVDSLSTSAATEDHVSMGGWAAR Sbjct: 481 ELPAFLVAEGGLNSGFMIAHCTAAALVSENKALCHPSSVDSLSTSAATEDHVSMGGWAAR 540 Query: 541 KALRVIEHVEQVLAIELLAACQGIEFLRPLKTTTPLEKVYDLVRSVVRPWIKDRFMAPDI 600 KALRVIEHVEQVLAIELLAACQGIEFLRPLKTTTPLEKVYDLVRSVVRPWIKDRFMAPDI Sbjct: 541 KALRVIEHVEQVLAIELLAACQGIEFLRPLKTTTPLEKVYDLVRSVVRPWIKDRFMAPDI 600 Query: 601 EAAHRLLLEQKVWEVAAPYIEKYRMEHIPESRPLSPTAFSLQFLHKKSTKIPESEDL 657 EAAHRLLLEQKVWEVAAPYIEKYRMEHIPESRPLSPTAFSLQFLHKKSTKIPESEDL Sbjct: 601 EAAHRLLLEQKVWEVAAPYIEKYRMEHIPESRPLSPTAFSLQFLHKKSTKIPESEDL 657 >gi|119120907 par-3 partitioning defective 3 homolog B isoform a [Homo sapiens] Length = 1104 Score = 36.2 bits (82), Expect = 0.098 Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 4/73 (5%) Query: 13 LAVPCQDAQLTVGWLGREAVRRYIKNKPDNGGFTSVDDAHFLVRRCKGLGLLDNEDRLEV 72 + VPC++ QL VG L ++A++RY+K + G+ H L G+LD +D L Sbjct: 12 IVVPCKEGQLRVGELTQQALQRYLKTREKGPGYWV--KIHHL--EYTDGGILDPDDVLAD 67 Query: 73 ALENNEFVEVVIE 85 +E+ + + V E Sbjct: 68 VVEDKDKLIAVFE 80 >gi|119120903 par-3 partitioning defective 3 homolog B isoform c [Homo sapiens] Length = 1136 Score = 36.2 bits (82), Expect = 0.098 Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 4/73 (5%) Query: 13 LAVPCQDAQLTVGWLGREAVRRYIKNKPDNGGFTSVDDAHFLVRRCKGLGLLDNEDRLEV 72 + VPC++ QL VG L ++A++RY+K + G+ H L G+LD +D L Sbjct: 12 IVVPCKEGQLRVGELTQQALQRYLKTREKGPGYWV--KIHHL--EYTDGGILDPDDVLAD 67 Query: 73 ALENNEFVEVVIE 85 +E+ + + V E Sbjct: 68 VVEDKDKLIAVFE 80 >gi|119120897 par-3 partitioning defective 3 homolog B isoform b [Homo sapiens] Length = 1143 Score = 36.2 bits (82), Expect = 0.098 Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 4/73 (5%) Query: 13 LAVPCQDAQLTVGWLGREAVRRYIKNKPDNGGFTSVDDAHFLVRRCKGLGLLDNEDRLEV 72 + VPC++ QL VG L ++A++RY+K + G+ H L G+LD +D L Sbjct: 12 IVVPCKEGQLRVGELTQQALQRYLKTREKGPGYWV--KIHHL--EYTDGGILDPDDVLAD 67 Query: 73 ALENNEFVEVVIE 85 +E+ + + V E Sbjct: 68 VVEDKDKLIAVFE 80 >gi|16445033 ACRC protein [Homo sapiens] Length = 691 Score = 34.3 bits (77), Expect = 0.37 Identities = 56/226 (24%), Positives = 95/226 (42%), Gaps = 24/226 (10%) Query: 71 EVALENNEFVEVVIE-GDAMSPDFIPSQPEGVYLYSKYREPEKYIELDGDRLTTED---- 125 ++A + E VE S D Q G L +PE E+ +L TE+ Sbjct: 346 QIASDEEELVEAAAAVSQHDSSDDAGEQDLGENLSKPPSDPEANPEVSERKLPTEEEPAP 405 Query: 126 -LVNLGKGRYKIK-LTPTAEKRVQKSREVIDSIIKEKTVVYGITTGFGKF-ART----VI 178 + GK + K K + KR K++ +++ K +T I K A+T V Sbjct: 406 VVEQSGKRKSKTKTIVEPPRKRQTKTKNIVEPPRKRQTKTKNIVEPLRKRKAKTKNVSVT 465 Query: 179 PINKLQELQVNLVRSHSSGVGKPLSPERCRML-LALRINVLAKGYSGISL-----ETLKQ 232 P +K + + K +P +C++ L+ +K YSG +L E +++ Sbjct: 466 PGHKKRGPSKKKPGAAKVEKRKTRTP-KCKVPGCFLQDLEKSKKYSGKNLKRNKDELVQR 524 Query: 233 VIEMFNAS-CLPYVPEKGTVGASGDLAPLSHLALGLVGEGKMWSPK 277 + ++FN S C +PEK +G + + + GL G+MW PK Sbjct: 525 IYDLFNRSVCDKKLPEKLRIGWNNKMVKTA----GLCSTGEMWYPK 566 >gi|16933565 protocadherin 21 precursor [Homo sapiens] Length = 859 Score = 33.9 bits (76), Expect = 0.49 Identities = 50/214 (23%), Positives = 78/214 (36%), Gaps = 48/214 (22%) Query: 177 VIPINKLQELQVNLVRSHSSGVGKPLSPERCRMLLALRINVLAKGYSGIS-----LETLK 231 V+P L E QV ++ +S+ + S LLA+ +N K S L+T Sbjct: 408 VVPQTVLNEAQVTIIVENSAAIDFEKSKVLTFKLLAVEVNTPEKFSSTADVVIQLLDTND 467 Query: 232 QVIEMFNASCLPYVPEKGTVGASGDLAPLSHLALGLVGEGKMWSPKSG-WADAKYVLEAH 290 V + + + +PE G+ S +A+ V P +G W + KY Sbjct: 468 NVPKFDSLYYVARIPENAPGGS-------SVVAVTAV------DPDTGPWGEVKYSTYGT 514 Query: 291 GLKPVILKPKEGLALINGTQMITSLGCEAVERASAIARQADIVAALTLEVLKGTTKAFDT 350 G ++ P GL TQ SL EA R + + D+ Sbjct: 515 GADLFLIHPSTGLIY---TQPWASLDAEATARYNFYVKAEDM------------------ 553 Query: 351 DIHALRPHRGQIEVAFRFRSLLDSDHHPSEIAES 384 G+ VA F +LLD + HP + +S Sbjct: 554 --------EGKYSVAEVFITLLDVNDHPPQFGKS 579 >gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens] Length = 495 Score = 32.7 bits (73), Expect = 1.1 Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 5/107 (4%) Query: 57 RCKGLGLLDNEDRLEVALENNEFVEVVIEGDAMSPDFIPSQPEGVYLYSKYREPEKYIEL 116 R + L + E +L+ A N E + E DA+ + + E + E K I Sbjct: 115 RENSIELRELEKKLKAAYMNKERAAQIAEKDAIKYEQMKRDAE---IAKTMMEEHKRIIK 171 Query: 117 DGDRLTTEDLVNLGKGRYKIKLTPTAEKRVQKSREVIDSIIKEKTVV 163 + + ED N K +Y + L E++ +K +E + ++KEK ++ Sbjct: 172 EEN--AAEDKRNKAKAQYYLDLEKQLEEQEKKKQEAYEQLLKEKLMI 216 >gi|48928029 trafficking protein particle complex 10 [Homo sapiens] Length = 1259 Score = 32.3 bits (72), Expect = 1.4 Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Query: 358 HRGQIEVAFRFRSLLDSDHHPSEIAESHRFCDRVQD 393 H GQIE + SLL SDHH +E H FC + D Sbjct: 531 HLGQIENYLQTSSLLASDHHLTEEERKH-FCQEILD 565 >gi|24497531 Ellis van Creveld syndrome protein [Homo sapiens] Length = 992 Score = 30.8 bits (68), Expect = 4.1 Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 4/99 (4%) Query: 318 EAVERASAIARQADIVAALTLEVLKGTTKAFDTDIHALRPHRGQIEVAFRFRSLLDSDHH 377 +A+ER A A ++ L L+V + T H L G+ +++ R + L + H Sbjct: 367 DALERTMGRAHMAKVIEFLKLQVQEETRCRLAAISHGLELLAGEGKLSGRQKEELLTQQH 426 Query: 378 PSEIAESHR----FCDRVQDAYTLRCCPQVHGVVNDTIA 412 + E+ R F R +D T QV G T+A Sbjct: 427 KAFWQEAERFSREFVQRGKDLVTASLAHQVEGTAKLTLA 465 >gi|17196626 patatin-like phospholipase domain containing 3 [Homo sapiens] Length = 481 Score = 30.4 bits (67), Expect = 5.4 Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 25/203 (12%) Query: 342 KGTTKAFDTDIHALRPHRGQIEVAFRFRSLLDSDHHPSEIAESHRFCDRVQDAYTLRC-C 400 +G K ++H L G+I + SL + + R D V DA C Sbjct: 96 QGLCKCLPANVHQLIS--GKIGI-----SLTRVSDGENVLVSDFRSKDEVVDALVCSCFI 148 Query: 401 PQVHGVVNDTIAFVKNIITTELNSATDNPMVFANRGETVSGGNFHGEYP----AKALDYL 456 P G++ + V+ + + + + F + T++ F+GEY K+ ++L Sbjct: 149 PFYSGLIPPSFRGVRYV-----DGGVSDNVPFIDAKTTITVSPFYGEYDICPKVKSTNFL 203 Query: 457 AIGIHELAAISERRIERLCNPSLSELP-AFLVAEGGLNSGFMIAHCTAAALVSENKALCH 515 + I +L+ RLC +L L AF+ + + + A E K +C+ Sbjct: 204 HVDITKLSL-------RLCTGNLYLLSRAFVPPDLKVLGEICLRGYLDAFRFLEEKGICN 256 Query: 516 PSSVDSLSTSAATEDHVSMGGWA 538 S+S + V+M WA Sbjct: 257 RPQPGLKSSSEGMDPEVAMPSWA 279 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.319 0.135 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,944,259 Number of Sequences: 37866 Number of extensions: 1034755 Number of successful extensions: 2070 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 2062 Number of HSP's gapped (non-prelim): 13 length of query: 657 length of database: 18,247,518 effective HSP length: 109 effective length of query: 548 effective length of database: 14,120,124 effective search space: 7737827952 effective search space used: 7737827952 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.