Search of human proteins with 4504263

Search of human proteins with 4504263

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4504263 histone cluster 1, H2bm [Homo sapiens]
         (126 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4504263 histone cluster 1, H2bm [Homo sapiens]                     246   3e-66
gi|10800138 histone cluster 1, H2bd [Homo sapiens]                    241   1e-64
gi|20336752 histone cluster 1, H2bd [Homo sapiens]                    241   1e-64
gi|21396484 histone cluster 1, H2be [Homo sapiens]                    241   1e-64
gi|4504265 histone cluster 1, H2bf [Homo sapiens]                     241   1e-64
gi|4504257 histone cluster 1, H2bg [Homo sapiens]                     241   1e-64
gi|21166389 histone cluster 1, H2bc [Homo sapiens]                    241   1e-64
gi|4504271 histone cluster 1, H2bi [Homo sapiens]                     241   1e-64
gi|4504277 histone cluster 2, H2be [Homo sapiens]                     240   2e-64
gi|4504261 histone cluster 1, H2bn [Homo sapiens]                     240   2e-64
gi|10800140 histone cluster 1, H2bb [Homo sapiens]                    240   2e-64
gi|18105048 histone cluster 1, H2bk [Homo sapiens]                    239   3e-64
gi|4504269 histone cluster 1, H2bh [Homo sapiens]                     239   3e-64
gi|20336754 histone cluster 1, H2bj [Homo sapiens]                    239   4e-64
gi|16306566 histone cluster 1, H2bo [Homo sapiens]                    239   4e-64
gi|238624110 histone cluster 2, H2bf isoform b [Homo sapiens]         238   9e-64
gi|66912162 histone cluster 2, H2bf isoform a [Homo sapiens]          238   9e-64
gi|4504259 histone cluster 1, H2bl [Homo sapiens]                     234   1e-62
gi|28173554 histone cluster 3, H2bb [Homo sapiens]                    234   1e-62
gi|24586679 histone cluster 1, H2ba [Homo sapiens]                    207   2e-54
gi|169217174 PREDICTED: H2B histone family, member M [Homo sapiens]    98   2e-21
gi|169216381 PREDICTED: H2B histone family, member M [Homo sapiens]    98   2e-21
gi|169216635 PREDICTED: H2B histone family, member M [Homo sapiens]    98   2e-21
gi|50897288 H2B histone family, member W, testis-specific [Homo ...    94   3e-20
gi|169217181 PREDICTED: similar to RAB40A, member RAS oncogene f...    39   0.001
gi|169216368 PREDICTED: similar to RAB40A, member RAS oncogene f...    39   0.001
gi|169216631 PREDICTED: similar to RAB40A, member RAS oncogene f...    39   0.001
gi|65786661 BTB (POZ) domain containing 11 isoform a [Homo sapiens]    34   0.026
gi|169167761 PREDICTED: similar to HIStone family member (his-72...    30   0.49 
gi|88987392 PREDICTED: similar to HIStone family member (his-72)...    30   0.49 

>gi|4504263 histone cluster 1, H2bm [Homo sapiens]
          Length = 126

 Score =  246 bits (629), Expect = 3e-66
 Identities = 126/126 (100%), Positives = 126/126 (100%)

Query: 1   MPEPVKSAPVPKKGSKKAINKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MPEPVKSAPVPKKGSKKAINKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPEPVKSAPVPKKGSKKAINKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|10800138 histone cluster 1, H2bd [Homo sapiens]
          Length = 126

 Score =  241 bits (614), Expect = 1e-64
 Identities = 122/126 (96%), Positives = 123/126 (97%)

Query: 1   MPEPVKSAPVPKKGSKKAINKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MPEP KSAP PKKGSKKA+ KAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|20336752 histone cluster 1, H2bd [Homo sapiens]
          Length = 126

 Score =  241 bits (614), Expect = 1e-64
 Identities = 122/126 (96%), Positives = 123/126 (97%)

Query: 1   MPEPVKSAPVPKKGSKKAINKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MPEP KSAP PKKGSKKA+ KAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|21396484 histone cluster 1, H2be [Homo sapiens]
          Length = 126

 Score =  241 bits (614), Expect = 1e-64
 Identities = 122/126 (96%), Positives = 123/126 (97%)

Query: 1   MPEPVKSAPVPKKGSKKAINKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MPEP KSAP PKKGSKKA+ KAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|4504265 histone cluster 1, H2bf [Homo sapiens]
          Length = 126

 Score =  241 bits (614), Expect = 1e-64
 Identities = 122/126 (96%), Positives = 123/126 (97%)

Query: 1   MPEPVKSAPVPKKGSKKAINKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MPEP KSAP PKKGSKKA+ KAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|4504257 histone cluster 1, H2bg [Homo sapiens]
          Length = 126

 Score =  241 bits (614), Expect = 1e-64
 Identities = 122/126 (96%), Positives = 123/126 (97%)

Query: 1   MPEPVKSAPVPKKGSKKAINKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MPEP KSAP PKKGSKKA+ KAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|21166389 histone cluster 1, H2bc [Homo sapiens]
          Length = 126

 Score =  241 bits (614), Expect = 1e-64
 Identities = 122/126 (96%), Positives = 123/126 (97%)

Query: 1   MPEPVKSAPVPKKGSKKAINKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MPEP KSAP PKKGSKKA+ KAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|4504271 histone cluster 1, H2bi [Homo sapiens]
          Length = 126

 Score =  241 bits (614), Expect = 1e-64
 Identities = 122/126 (96%), Positives = 123/126 (97%)

Query: 1   MPEPVKSAPVPKKGSKKAINKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MPEP KSAP PKKGSKKA+ KAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|4504277 histone cluster 2, H2be [Homo sapiens]
          Length = 126

 Score =  240 bits (613), Expect = 2e-64
 Identities = 121/126 (96%), Positives = 123/126 (97%)

Query: 1   MPEPVKSAPVPKKGSKKAINKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MPEP KSAP PKKGSKKA+ KAQKKDGKKRKRSRKESYS+YVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|4504261 histone cluster 1, H2bn [Homo sapiens]
          Length = 126

 Score =  240 bits (612), Expect = 2e-64
 Identities = 122/126 (96%), Positives = 123/126 (97%)

Query: 1   MPEPVKSAPVPKKGSKKAINKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MPEP KSAP PKKGSKKA+ KAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPEPSKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|10800140 histone cluster 1, H2bb [Homo sapiens]
          Length = 126

 Score =  240 bits (612), Expect = 2e-64
 Identities = 122/126 (96%), Positives = 123/126 (97%)

Query: 1   MPEPVKSAPVPKKGSKKAINKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MPEP KSAP PKKGSKKAI KAQKKDGKKRKRSRKESYS+YVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPEPSKSAPAPKKGSKKAITKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|18105048 histone cluster 1, H2bk [Homo sapiens]
          Length = 126

 Score =  239 bits (611), Expect = 3e-64
 Identities = 121/126 (96%), Positives = 123/126 (97%)

Query: 1   MPEPVKSAPVPKKGSKKAINKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MPEP KSAP PKKGSKKA+ KAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTS+K
Sbjct: 121 KYTSAK 126


>gi|4504269 histone cluster 1, H2bh [Homo sapiens]
          Length = 126

 Score =  239 bits (611), Expect = 3e-64
 Identities = 121/126 (96%), Positives = 123/126 (97%)

Query: 1   MPEPVKSAPVPKKGSKKAINKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MP+P KSAP PKKGSKKA+ KAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPDPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|20336754 histone cluster 1, H2bj [Homo sapiens]
          Length = 126

 Score =  239 bits (610), Expect = 4e-64
 Identities = 120/126 (95%), Positives = 123/126 (97%)

Query: 1   MPEPVKSAPVPKKGSKKAINKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MPEP KSAP PKKGSKKA+ KAQKKDGKKRKRSRKESYS+YVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTS+K
Sbjct: 121 KYTSAK 126


>gi|16306566 histone cluster 1, H2bo [Homo sapiens]
          Length = 126

 Score =  239 bits (610), Expect = 4e-64
 Identities = 120/126 (95%), Positives = 123/126 (97%)

Query: 1   MPEPVKSAPVPKKGSKKAINKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MP+P KSAP PKKGSKKA+ KAQKKDGKKRKRSRKESYS+YVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPDPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|238624110 histone cluster 2, H2bf isoform b [Homo sapiens]
          Length = 134

 Score =  238 bits (607), Expect = 9e-64
 Identities = 120/126 (95%), Positives = 122/126 (96%)

Query: 1   MPEPVKSAPVPKKGSKKAINKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MP+P KSAP PKKGSKKA+ K QKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPDPAKSAPAPKKGSKKAVTKVQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|66912162 histone cluster 2, H2bf isoform a [Homo sapiens]
          Length = 126

 Score =  238 bits (607), Expect = 9e-64
 Identities = 120/126 (95%), Positives = 122/126 (96%)

Query: 1   MPEPVKSAPVPKKGSKKAINKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MP+P KSAP PKKGSKKA+ K QKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPDPAKSAPAPKKGSKKAVTKVQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|4504259 histone cluster 1, H2bl [Homo sapiens]
          Length = 126

 Score =  234 bits (598), Expect = 1e-62
 Identities = 120/126 (95%), Positives = 121/126 (96%)

Query: 1   MPEPVKSAPVPKKGSKKAINKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MPE  KSAP PKKGSKKA+ KAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPELAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIA EASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|28173554 histone cluster 3, H2bb [Homo sapiens]
          Length = 126

 Score =  234 bits (597), Expect = 1e-62
 Identities = 117/126 (92%), Positives = 121/126 (96%)

Query: 1   MPEPVKSAPVPKKGSKKAINKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MP+P KSAP PKKGSKKA+ KAQKKDGKKRKR RKESYS+YVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPDPSKSAPAPKKGSKKAVTKAQKKDGKKRKRGRKESYSIYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIA EASRLAHYNKRSTITSRE+QTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIASEASRLAHYNKRSTITSREVQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|24586679 histone cluster 1, H2ba [Homo sapiens]
          Length = 127

 Score =  207 bits (526), Expect = 2e-54
 Identities = 107/127 (84%), Positives = 115/127 (90%), Gaps = 1/127 (0%)

Query: 1   MPE-PVKSAPVPKKGSKKAINKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKA 59
           MPE   K A + KKG KKA+ K QKK+GKKRKR+RKESYS+Y+YKVLKQVHPDTGISSKA
Sbjct: 1   MPEVSSKGATISKKGFKKAVVKTQKKEGKKRKRTRKESYSIYIYKVLKQVHPDTGISSKA 60

Query: 60  MGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAV 119
           M IMNSFV DIFERIA EASRLAHY+KRSTI+SREIQTAVRLLLPGELAKHAVSEGTKAV
Sbjct: 61  MSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAV 120

Query: 120 TKYTSSK 126
           TKYTSSK
Sbjct: 121 TKYTSSK 127


>gi|169217174 PREDICTED: H2B histone family, member M [Homo sapiens]
          Length = 248

 Score = 97.8 bits (242), Expect = 2e-21
 Identities = 48/110 (43%), Positives = 75/110 (68%)

Query: 12  KKGSKKAINKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIF 71
           +K  ++    ++++   +R  S  +S++ Y  +VLKQVH    +S +A+ +M+S ++DI 
Sbjct: 128 QKQKRRGCRGSRRRHANRRGDSFGDSFTPYFPRVLKQVHXGLSLSQEAVSVMDSMIHDIL 187

Query: 72  ERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTK 121
           +RIA EA +LAHY KR TITSR+IQ AVRLLLPG++ K A ++GT A  +
Sbjct: 188 DRIATEAGQLAHYTKRVTITSRDIQMAVRLLLPGKMGKLAEAQGTNAALR 237


>gi|169216381 PREDICTED: H2B histone family, member M [Homo sapiens]
          Length = 257

 Score = 97.8 bits (242), Expect = 2e-21
 Identities = 48/110 (43%), Positives = 75/110 (68%)

Query: 12  KKGSKKAINKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIF 71
           +K  ++    ++++   +R  S  +S++ Y  +VLKQVH    +S +A+ +M+S ++DI 
Sbjct: 137 QKQKRRGCRGSRRRHANRRGDSFGDSFTPYFPRVLKQVHQGLSLSQEAVSVMDSMIHDIL 196

Query: 72  ERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTK 121
           +RIA EA +LAHY KR TITSR+IQ AVRLLLPG++ K A ++GT A  +
Sbjct: 197 DRIATEAGQLAHYTKRVTITSRDIQMAVRLLLPGKMGKLAEAQGTNAALR 246


>gi|169216635 PREDICTED: H2B histone family, member M [Homo sapiens]
          Length = 257

 Score = 97.8 bits (242), Expect = 2e-21
 Identities = 48/110 (43%), Positives = 75/110 (68%)

Query: 12  KKGSKKAINKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIF 71
           +K  ++    ++++   +R  S  +S++ Y  +VLKQVH    +S +A+ +M+S ++DI 
Sbjct: 137 QKQKRRGCRGSRRRHANRRGDSFGDSFTPYFPRVLKQVHQGLSLSQEAVSVMDSMIHDIL 196

Query: 72  ERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTK 121
           +RIA EA +LAHY KR TITSR+IQ AVRLLLPG++ K A ++GT A  +
Sbjct: 197 DRIATEAGQLAHYTKRVTITSRDIQMAVRLLLPGKMGKLAEAQGTNAALR 246


>gi|50897288 H2B histone family, member W, testis-specific [Homo
           sapiens]
          Length = 175

 Score = 94.0 bits (232), Expect = 3e-20
 Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 11/117 (9%)

Query: 16  KKAINKAQKKDGKKRKRSRK-----------ESYSVYVYKVLKQVHPDTGISSKAMGIMN 64
           K+A +   +K  K+RKR R            +S++ Y  +VLKQVH    +S +A+ +M+
Sbjct: 48  KEANSTTSQKQSKQRKRGRHGPRRCHSNCRGDSFATYFRRVLKQVHQGLSLSREAVSVMD 107

Query: 65  SFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTK 121
           S V+DI +RIA EA  LA   KR TIT+ E + AVRLLLPG++ K A SEGTKAV +
Sbjct: 108 SLVHDILDRIATEAGHLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLR 164


>gi|169217181 PREDICTED: similar to RAB40A, member RAS oncogene
          family [Homo sapiens]
          Length = 224

 Score = 38.5 bits (88), Expect = 0.001
 Identities = 18/34 (52%), Positives = 22/34 (64%)

Query: 45 VLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEA 78
          VLKQ HPD   +   +GIMN F+ DIFE I  +A
Sbjct: 31 VLKQFHPDISTTLNFLGIMNDFLIDIFEHITTKA 64


>gi|169216368 PREDICTED: similar to RAB40A, member RAS oncogene
          family [Homo sapiens]
          Length = 224

 Score = 38.5 bits (88), Expect = 0.001
 Identities = 18/34 (52%), Positives = 22/34 (64%)

Query: 45 VLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEA 78
          VLKQ HPD   +   +GIMN F+ DIFE I  +A
Sbjct: 31 VLKQFHPDISTTLNFLGIMNDFLIDIFEHITTKA 64


>gi|169216631 PREDICTED: similar to RAB40A, member RAS oncogene
          family [Homo sapiens]
          Length = 224

 Score = 38.5 bits (88), Expect = 0.001
 Identities = 18/34 (52%), Positives = 22/34 (64%)

Query: 45 VLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEA 78
          VLKQ HPD   +   +GIMN F+ DIFE I  +A
Sbjct: 31 VLKQFHPDISTTLNFLGIMNDFLIDIFEHITTKA 64


>gi|65786661 BTB (POZ) domain containing 11 isoform a [Homo sapiens]
          Length = 1104

 Score = 34.3 bits (77), Expect = 0.026
 Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 2/72 (2%)

Query: 54  GISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVS 113
           G+   A+  +++ V+    RIA EA RL+   + +  T  EIQ+A+ ++L   LA H  +
Sbjct: 123 GLPKDALAKLSTLVSRALVRIAKEAQRLSL--RFAKCTKYEIQSAMEIVLSWGLAAHCTA 180

Query: 114 EGTKAVTKYTSS 125
               A++ Y  S
Sbjct: 181 AALAALSLYNMS 192


>gi|169167761 PREDICTED: similar to HIStone family member (his-72)
           [Homo sapiens]
          Length = 136

 Score = 30.0 bits (66), Expect = 0.49
 Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 10/109 (9%)

Query: 6   KSAPVPKKGSKK---------AINKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGIS 56
           K AP P  G KK         A+ + +K     +   RK  +   V ++ + + PD    
Sbjct: 28  KRAP-PTGGIKKPHRYKPGTLALREIRKYQKSTQLLLRKLPFQRLVREIAQAISPDLRFQ 86

Query: 57  SKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPG 105
           S A+G +         ++  + +  A + +R TI  R++Q A RL   G
Sbjct: 87  SAAIGALQEASEAYLVQLFEDTNLCAIHARRVTIMPRDMQLARRLRREG 135


>gi|88987392 PREDICTED: similar to HIStone family member (his-72)
           [Homo sapiens]
          Length = 136

 Score = 30.0 bits (66), Expect = 0.49
 Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 10/109 (9%)

Query: 6   KSAPVPKKGSKK---------AINKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGIS 56
           K AP P  G KK         A+ + +K     +   RK  +   V ++ + + PD    
Sbjct: 28  KRAP-PTGGIKKPHRYKPGTLALREIRKYQKSTQLLLRKLPFQRLVREIAQAISPDLRFQ 86

Query: 57  SKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPG 105
           S A+G +         ++  + +  A + +R TI  R++Q A RL   G
Sbjct: 87  SAAIGALQEASEAYLVQLFEDTNLCAIHARRVTIMPRDMQLARRLRREG 135


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.310    0.125    0.332 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,119,205
Number of Sequences: 37866
Number of extensions: 143851
Number of successful extensions: 783
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 676
Number of HSP's gapped (non-prelim): 114
length of query: 126
length of database: 18,247,518
effective HSP length: 90
effective length of query: 36
effective length of database: 14,839,578
effective search space: 534224808
effective search space used: 534224808
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.