Search of human proteins with 4504253

Search of human proteins with 4504253

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4504253 H2A histone family, member X [Homo sapiens]
         (143 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4504253 H2A histone family, member X [Homo sapiens]                279   6e-76
gi|28195394 histone cluster 2, H2ab [Homo sapiens]                    231   2e-61
gi|25092737 histone cluster 1, H2aa [Homo sapiens]                    228   1e-60
gi|4504245 histone cluster 1, H2ac [Homo sapiens]                     228   1e-60
gi|106775678 histone cluster 2, H2aa4 [Homo sapiens]                  228   2e-60
gi|24638446 histone cluster 2, H2ac [Homo sapiens]                    228   2e-60
gi|4504251 histone cluster 2, H2aa3 [Homo sapiens]                    228   2e-60
gi|10800132 histone cluster 1, H2ag [Homo sapiens]                    227   2e-60
gi|4504239 histone cluster 1, H2ai [Homo sapiens]                     227   2e-60
gi|18105045 histone cluster 1, H2ah [Homo sapiens]                    227   2e-60
gi|4504241 histone cluster 1, H2ak [Homo sapiens]                     227   2e-60
gi|15617199 histone cluster 3, H2a [Homo sapiens]                     227   2e-60
gi|4504249 histone cluster 1, H2am [Homo sapiens]                     227   2e-60
gi|4504243 histone cluster 1, H2al [Homo sapiens]                     227   2e-60
gi|10800144 histone cluster 1, H2aj [Homo sapiens]                    227   2e-60
gi|29553970 H2A histone family, member J [Homo sapiens]               227   3e-60
gi|19557656 histone cluster 1, H2ab [Homo sapiens]                    226   5e-60
gi|10645195 histone cluster 1, H2ae [Homo sapiens]                    226   5e-60
gi|10800130 histone cluster 1, H2ad [Homo sapiens]                    226   5e-60
gi|4758496 H2A histone family, member Y isoform 2 [Homo sapiens]      159   1e-39
gi|93141020 H2A histone family, member Y isoform 2 [Homo sapiens]     159   1e-39
gi|93141018 H2A histone family, member Y isoform 3 [Homo sapiens]     159   1e-39
gi|20336746 H2A histone family, member Y isoform 1 [Homo sapiens]     159   1e-39
gi|8923920 H2A histone family, member Y2 [Homo sapiens]               153   5e-38
gi|6912616 H2A histone family, member V isoform 1 [Homo sapiens]      135   9e-33
gi|4504255 H2A histone family, member Z [Homo sapiens]                134   2e-32
gi|20357599 H2A histone family, member V isoform 2 [Homo sapiens]     122   1e-28
gi|41406067 H2A histone family, member V isoform 3 [Homo sapiens]     107   4e-24
gi|169206129 PREDICTED: similar to hCG1643984 [Homo sapiens]          100   4e-22
gi|169206468 PREDICTED: similar to hCG1643984 [Homo sapiens]          100   4e-22

>gi|4504253 H2A histone family, member X [Homo sapiens]
          Length = 143

 Score =  279 bits (713), Expect = 6e-76
 Identities = 143/143 (100%), Positives = 143/143 (100%)

Query: 1   MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT 60
           MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TSATVGPKAPSGGKKATQASQEY 143
           TSATVGPKAPSGGKKATQASQEY
Sbjct: 121 TSATVGPKAPSGGKKATQASQEY 143


>gi|28195394 histone cluster 2, H2ab [Homo sapiens]
          Length = 130

 Score =  231 bits (589), Expect = 2e-61
 Identities = 118/123 (95%), Positives = 121/123 (98%)

Query: 1   MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT 60
           MSGRGK GGKARAKAKSRSSRAGLQFPVGRVHRLLRKG+YAERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TSA 123
           T +
Sbjct: 121 TES 123


>gi|25092737 histone cluster 1, H2aa [Homo sapiens]
          Length = 131

 Score =  228 bits (582), Expect = 1e-60
 Identities = 115/123 (93%), Positives = 121/123 (98%)

Query: 1   MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT 60
           MSGRGK GGKARAK+KSRSSRAGLQFPVGR+HRLLRKG+YAER+GAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNA+RDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TSA 123
           T +
Sbjct: 121 TES 123


>gi|4504245 histone cluster 1, H2ac [Homo sapiens]
          Length = 130

 Score =  228 bits (582), Expect = 1e-60
 Identities = 118/123 (95%), Positives = 120/123 (97%)

Query: 1   MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT 60
           MSGRGK GGKARAKAKSRSSRAGLQFPVGRVHRLLRKG+YAERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TSA 123
           T +
Sbjct: 121 TES 123


>gi|106775678 histone cluster 2, H2aa4 [Homo sapiens]
          Length = 130

 Score =  228 bits (580), Expect = 2e-60
 Identities = 117/123 (95%), Positives = 120/123 (97%)

Query: 1   MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT 60
           MSGRGK GGKARAKAKSRSSRAGLQFPVGRVHRLLRKG+YAERVGAGAPVY+AAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TSA 123
           T +
Sbjct: 121 TES 123


>gi|24638446 histone cluster 2, H2ac [Homo sapiens]
          Length = 129

 Score =  228 bits (580), Expect = 2e-60
 Identities = 117/123 (95%), Positives = 120/123 (97%)

Query: 1   MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT 60
           MSGRGK GGKARAKAKSRSSRAGLQFPVGRVHRLLRKG+YAERVGAGAPVY+AAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TSA 123
           T +
Sbjct: 121 TES 123


>gi|4504251 histone cluster 2, H2aa3 [Homo sapiens]
          Length = 130

 Score =  228 bits (580), Expect = 2e-60
 Identities = 117/123 (95%), Positives = 120/123 (97%)

Query: 1   MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT 60
           MSGRGK GGKARAKAKSRSSRAGLQFPVGRVHRLLRKG+YAERVGAGAPVY+AAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TSA 123
           T +
Sbjct: 121 TES 123


>gi|10800132 histone cluster 1, H2ag [Homo sapiens]
          Length = 130

 Score =  227 bits (579), Expect = 2e-60
 Identities = 117/123 (95%), Positives = 120/123 (97%)

Query: 1   MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT 60
           MSGRGK GGKARAKAK+RSSRAGLQFPVGRVHRLLRKG+YAERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TSA 123
           T +
Sbjct: 121 TES 123


>gi|4504239 histone cluster 1, H2ai [Homo sapiens]
          Length = 130

 Score =  227 bits (579), Expect = 2e-60
 Identities = 117/123 (95%), Positives = 120/123 (97%)

Query: 1   MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT 60
           MSGRGK GGKARAKAK+RSSRAGLQFPVGRVHRLLRKG+YAERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TSA 123
           T +
Sbjct: 121 TES 123


>gi|18105045 histone cluster 1, H2ah [Homo sapiens]
          Length = 128

 Score =  227 bits (579), Expect = 2e-60
 Identities = 117/123 (95%), Positives = 120/123 (97%)

Query: 1   MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT 60
           MSGRGK GGKARAKAK+RSSRAGLQFPVGRVHRLLRKG+YAERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TSA 123
           T +
Sbjct: 121 TES 123


>gi|4504241 histone cluster 1, H2ak [Homo sapiens]
          Length = 130

 Score =  227 bits (579), Expect = 2e-60
 Identities = 117/123 (95%), Positives = 120/123 (97%)

Query: 1   MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT 60
           MSGRGK GGKARAKAK+RSSRAGLQFPVGRVHRLLRKG+YAERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TSA 123
           T +
Sbjct: 121 TES 123


>gi|15617199 histone cluster 3, H2a [Homo sapiens]
          Length = 130

 Score =  227 bits (579), Expect = 2e-60
 Identities = 117/123 (95%), Positives = 120/123 (97%)

Query: 1   MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT 60
           MSGRGK GGKARAKAKSRSSRAGLQFPVGRVHRLLRKG+Y+ERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TSA 123
           T +
Sbjct: 121 TES 123


>gi|4504249 histone cluster 1, H2am [Homo sapiens]
          Length = 130

 Score =  227 bits (579), Expect = 2e-60
 Identities = 117/123 (95%), Positives = 120/123 (97%)

Query: 1   MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT 60
           MSGRGK GGKARAKAK+RSSRAGLQFPVGRVHRLLRKG+YAERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TSA 123
           T +
Sbjct: 121 TES 123


>gi|4504243 histone cluster 1, H2al [Homo sapiens]
          Length = 130

 Score =  227 bits (579), Expect = 2e-60
 Identities = 117/123 (95%), Positives = 120/123 (97%)

Query: 1   MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT 60
           MSGRGK GGKARAKAK+RSSRAGLQFPVGRVHRLLRKG+YAERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TSA 123
           T +
Sbjct: 121 TES 123


>gi|10800144 histone cluster 1, H2aj [Homo sapiens]
          Length = 128

 Score =  227 bits (579), Expect = 2e-60
 Identities = 117/123 (95%), Positives = 120/123 (97%)

Query: 1   MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT 60
           MSGRGK GGKARAKAK+RSSRAGLQFPVGRVHRLLRKG+YAERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TSA 123
           T +
Sbjct: 121 TES 123


>gi|29553970 H2A histone family, member J [Homo sapiens]
          Length = 129

 Score =  227 bits (578), Expect = 3e-60
 Identities = 117/123 (95%), Positives = 119/123 (96%)

Query: 1   MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT 60
           MSGRGK GGK RAKAKSRSSRAGLQFPVGRVHRLLRKG+YAERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TSA 123
           T +
Sbjct: 121 TES 123


>gi|19557656 histone cluster 1, H2ab [Homo sapiens]
          Length = 130

 Score =  226 bits (576), Expect = 5e-60
 Identities = 116/123 (94%), Positives = 120/123 (97%)

Query: 1   MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT 60
           MSGRGK GGKARAKAK+RSSRAGLQFPVGRVHRLLRKG+Y+ERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TSA 123
           T +
Sbjct: 121 TES 123


>gi|10645195 histone cluster 1, H2ae [Homo sapiens]
          Length = 130

 Score =  226 bits (576), Expect = 5e-60
 Identities = 116/123 (94%), Positives = 120/123 (97%)

Query: 1   MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT 60
           MSGRGK GGKARAKAK+RSSRAGLQFPVGRVHRLLRKG+Y+ERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TSA 123
           T +
Sbjct: 121 TES 123


>gi|10800130 histone cluster 1, H2ad [Homo sapiens]
          Length = 130

 Score =  226 bits (576), Expect = 5e-60
 Identities = 116/123 (94%), Positives = 120/123 (97%)

Query: 1   MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT 60
           MSGRGK GGKARAKAK+RSSRAGLQFPVGRVHRLLRKG+Y+ERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TSA 123
           T +
Sbjct: 121 TES 123


>gi|4758496 H2A histone family, member Y isoform 2 [Homo sapiens]
          Length = 371

 Score =  159 bits (401), Expect = 1e-39
 Identities = 85/138 (61%), Positives = 102/138 (73%), Gaps = 3/138 (2%)

Query: 8   GGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLTAEILELA 67
           GGK ++   SRS++AG+ FPVGR+ R ++KGH   R+G GAPVY+AAVLEYLTAEILELA
Sbjct: 5   GGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILELA 64

Query: 68  GNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTSATVGP 127
           GNAARDNKK R+ PRH+ LA+ NDEELN+LL GVTIA GGVLPNI   LL KK  +    
Sbjct: 65  GNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGSKGKL 124

Query: 128 KA---PSGGKKATQASQE 142
           +A   P   KKA   SQ+
Sbjct: 125 EAIITPPPAKKAKSPSQK 142


>gi|93141020 H2A histone family, member Y isoform 2 [Homo sapiens]
          Length = 371

 Score =  159 bits (401), Expect = 1e-39
 Identities = 85/138 (61%), Positives = 102/138 (73%), Gaps = 3/138 (2%)

Query: 8   GGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLTAEILELA 67
           GGK ++   SRS++AG+ FPVGR+ R ++KGH   R+G GAPVY+AAVLEYLTAEILELA
Sbjct: 5   GGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILELA 64

Query: 68  GNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTSATVGP 127
           GNAARDNKK R+ PRH+ LA+ NDEELN+LL GVTIA GGVLPNI   LL KK  +    
Sbjct: 65  GNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGSKGKL 124

Query: 128 KA---PSGGKKATQASQE 142
           +A   P   KKA   SQ+
Sbjct: 125 EAIITPPPAKKAKSPSQK 142


>gi|93141018 H2A histone family, member Y isoform 3 [Homo sapiens]
          Length = 372

 Score =  159 bits (401), Expect = 1e-39
 Identities = 85/138 (61%), Positives = 102/138 (73%), Gaps = 3/138 (2%)

Query: 8   GGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLTAEILELA 67
           GGK ++   SRS++AG+ FPVGR+ R ++KGH   R+G GAPVY+AAVLEYLTAEILELA
Sbjct: 5   GGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILELA 64

Query: 68  GNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTSATVGP 127
           GNAARDNKK R+ PRH+ LA+ NDEELN+LL GVTIA GGVLPNI   LL KK  +    
Sbjct: 65  GNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGSKGKL 124

Query: 128 KA---PSGGKKATQASQE 142
           +A   P   KKA   SQ+
Sbjct: 125 EAIITPPPAKKAKSPSQK 142


>gi|20336746 H2A histone family, member Y isoform 1 [Homo sapiens]
          Length = 369

 Score =  159 bits (401), Expect = 1e-39
 Identities = 85/138 (61%), Positives = 102/138 (73%), Gaps = 3/138 (2%)

Query: 8   GGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLTAEILELA 67
           GGK ++   SRS++AG+ FPVGR+ R ++KGH   R+G GAPVY+AAVLEYLTAEILELA
Sbjct: 5   GGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILELA 64

Query: 68  GNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTSATVGP 127
           GNAARDNKK R+ PRH+ LA+ NDEELN+LL GVTIA GGVLPNI   LL KK  +    
Sbjct: 65  GNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGSKGKL 124

Query: 128 KA---PSGGKKATQASQE 142
           +A   P   KKA   SQ+
Sbjct: 125 EAIITPPPAKKAKSPSQK 142


>gi|8923920 H2A histone family, member Y2 [Homo sapiens]
          Length = 372

 Score =  153 bits (386), Expect = 5e-38
 Identities = 84/147 (57%), Positives = 100/147 (68%), Gaps = 9/147 (6%)

Query: 1   MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT 60
           MSGR    GK +    SRS+RAG+ FPVGR+ R L+KG +  R+  GAPVY+AAV+EYL 
Sbjct: 1   MSGRS---GKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLA 57

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPK- 119
           AEILELAGNAARDNKK RI PRH+ LA+ NDEELN+LL GVTIA GGVLP I   LL K 
Sbjct: 58  AEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK 117

Query: 120 -----KTSATVGPKAPSGGKKATQASQ 141
                K+   + P     G+KAT   +
Sbjct: 118 RGTKGKSETILSPPPEKRGRKATSGKK 144


>gi|6912616 H2A histone family, member V isoform 1 [Homo sapiens]
          Length = 128

 Score =  135 bits (341), Expect = 9e-33
 Identities = 76/117 (64%), Positives = 89/117 (76%), Gaps = 2/117 (1%)

Query: 5   GKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAE-RVGAGAPVYLAAVLEYLTAEI 63
           GK  GKA+AKA SRS RAGLQFPVGR+HR L+    +  RVGA A VY AA+LEYLTAE+
Sbjct: 7   GKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66

Query: 64  LELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           LELAGNA++D K  RI PRHLQLAIR DEEL+ L+   TIA GGV+P+I   L+ KK
Sbjct: 67  LELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 122


>gi|4504255 H2A histone family, member Z [Homo sapiens]
          Length = 128

 Score =  134 bits (338), Expect = 2e-32
 Identities = 75/117 (64%), Positives = 88/117 (75%), Gaps = 2/117 (1%)

Query: 5   GKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAE-RVGAGAPVYLAAVLEYLTAEI 63
           GK  GKA+ KA SRS RAGLQFPVGR+HR L+    +  RVGA A VY AA+LEYLTAE+
Sbjct: 7   GKDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEV 66

Query: 64  LELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           LELAGNA++D K  RI PRHLQLAIR DEEL+ L+   TIA GGV+P+I   L+ KK
Sbjct: 67  LELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 122


>gi|20357599 H2A histone family, member V isoform 2 [Homo sapiens]
          Length = 114

 Score =  122 bits (306), Expect = 1e-28
 Identities = 69/103 (66%), Positives = 79/103 (76%), Gaps = 2/103 (1%)

Query: 5   GKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAE-RVGAGAPVYLAAVLEYLTAEI 63
           GK  GKA+AKA SRS RAGLQFPVGR+HR L+    +  RVGA A VY AA+LEYLTAE+
Sbjct: 7   GKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66

Query: 64  LELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQG 106
           LELAGNA++D K  RI PRHLQLAIR DEEL+ L+   TIA G
Sbjct: 67  LELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGG 108


>gi|41406067 H2A histone family, member V isoform 3 [Homo sapiens]
          Length = 102

 Score =  107 bits (266), Expect = 4e-24
 Identities = 60/96 (62%), Positives = 72/96 (75%), Gaps = 2/96 (2%)

Query: 26  FPVGRVHRLLRKGHYAE-RVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHL 84
           FPVGR+HR L+    +  RVGA A VY AA+LEYLTAE+LELAGNA++D K  RI PRHL
Sbjct: 2   FPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL 61

Query: 85  QLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           QLAIR DEEL+ L+   TIA GGV+P+I   L+ KK
Sbjct: 62  QLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 96


>gi|169206129 PREDICTED: similar to hCG1643984 [Homo sapiens]
          Length = 111

 Score =  100 bits (249), Expect = 4e-22
 Identities = 63/123 (51%), Positives = 73/123 (59%), Gaps = 19/123 (15%)

Query: 1   MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT 60
           MSG GK   KA  +AK++ S   LQF  G VH LL KG+Y E+                 
Sbjct: 1   MSGCGKQSSKACTEAKTQPSWVSLQFLTGCVHLLLFKGNYYEK----------------- 43

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
             ILELAGN   DNKKT II  HLQLA  N+E++NKLLG V I Q  VLPNIQA +LPKK
Sbjct: 44  --ILELAGNGTCDNKKTCIILHHLQLASCNNEDVNKLLGKVIITQVTVLPNIQAKMLPKK 101

Query: 121 TSA 123
           T +
Sbjct: 102 TES 104


>gi|169206468 PREDICTED: similar to hCG1643984 [Homo sapiens]
          Length = 111

 Score =  100 bits (249), Expect = 4e-22
 Identities = 63/123 (51%), Positives = 73/123 (59%), Gaps = 19/123 (15%)

Query: 1   MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT 60
           MSG GK   KA  +AK++ S   LQF  G VH LL KG+Y E+                 
Sbjct: 1   MSGCGKQSSKACTEAKTQPSWVSLQFLTGCVHLLLFKGNYYEK----------------- 43

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
             ILELAGN   DNKKT II  HLQLA  N+E++NKLLG V I Q  VLPNIQA +LPKK
Sbjct: 44  --ILELAGNGTCDNKKTCIILHHLQLASCNNEDVNKLLGKVIITQVTVLPNIQAKMLPKK 101

Query: 121 TSA 123
           T +
Sbjct: 102 TES 104


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.132    0.364 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,103,671
Number of Sequences: 37866
Number of extensions: 206667
Number of successful extensions: 570
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 488
Number of HSP's gapped (non-prelim): 78
length of query: 143
length of database: 18,247,518
effective HSP length: 92
effective length of query: 51
effective length of database: 14,763,846
effective search space: 752956146
effective search space used: 752956146
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.