Guide to the Human Genome
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Name: DUSP6 Sequence: fasta or formatted (235aa) NCBI GI: 42764687
Description:

dual specificity phosphatase 6 isoform b

Referenced in:

Dual-Specificity Phosphatases

Other entries for this name:
alt prot [381aa] dual specificity phosphatase 6 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         12           1
 C cysteine            2.6          6           1
 D aspartate           6.0         14           1
 E glutamate           6.4         15           1
 F phenylalanine       3.4          8           1
 G glycine             6.0         14           2
 H histidine           0.9          2           1
 I isoleucine          3.8          9           1
 K lysine              4.3         10           2
 L leucine            12.8         30           3
 M methionine          3.4          8           1
 N asparagine          6.4         15           1
 P proline             3.8          9           1
 Q glutamine           4.3         10           2
 R arginine            6.8         16           2
 S serine              8.1         19           3
 T threonine           5.5         13           2
 V valine              6.8         16           2
 W tryptophan          0.9          2           1
 Y tyrosine            3.0          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dual specificity phosphatase 6 isoform b 
DUSP6                 0.548   dual specificity phosphatase 6 isoform a 
DUSP7                 0.331   dual specificity phosphatase 7 
DUSP9                 0.226   dual specificity phosphatase 9 
DUSP8                 0.143   dual specificity phosphatase 8 
DUSP16                0.139   dual specificity phosphatase 16 
DUSP10                0.125   dual specificity phosphatase 10 isoform b 
DUSP10                0.125   dual specificity phosphatase 10 isoform b 
DUSP10                0.125   dual specificity phosphatase 10 isoform a 
DUSP2                 0.114   dual specificity phosphatase 2 
DUSP4                 0.112   dual specificity phosphatase 4 isoform 1 
DUSP4                 0.112   dual specificity phosphatase 4 isoform 2 
DUSP5                 0.110   dual specificity phosphatase 5 
DUSP1                 0.107   dual specificity phosphatase 1 
SSH1                  0.085   slingshot 1 isoform 1 
SSH1                  0.085   slingshot 1 isoform 3 
SSH1                  0.085   slingshot 1 isoform 2 
DUSP14                0.085   dual specificity phosphatase 14 
DUSP22                0.078   dual specificity phosphatase 22 
DUSP19                0.067   dual specificity phosphatase 19 isoform 1 
SSH2                  0.065   slingshot 2 
DUSP21                0.060   dual specificity phosphatase 21 
DUSP19                0.060   dual specificity phosphatase 19 isoform 2 
DUSP15                0.056   dual specificity phosphatase 15 isoform a 
DUSP3                 0.056   dual specificity phosphatase 3 
DUSP12                0.054   dual specificity phosphatase 12 
LOC100290651          0.051   PREDICTED: hypothetical protein XP_002347464 
STYX                  0.051   serine/threonine/tyrosine interacting protein [Homo...
STYX                  0.051   serine/threonine/tyrosine interacting protein 
DUSP13                0.049   testis and skeletal muscle-specific dual specificity...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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