Search of human proteins with 42560227

Search of human proteins with 42560227

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|42560227 recombining binding protein suppressor of hairless
isoform 1 [Homo sapiens]
         (500 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|42560227 recombining binding protein suppressor of hairless i...  1025   0.0  
gi|42560229 recombining binding protein suppressor of hairless i...   984   0.0  
gi|42560223 recombining binding protein suppressor of hairless i...   981   0.0  
gi|42560225 recombining binding protein suppressor of hairless i...   981   0.0  
gi|34577081 recombining binding protein L [Homo sapiens]              489   e-138
gi|24497506 forkhead box A3 [Homo sapiens]                             31   3.0  
gi|96974985 coiled-coil and C2 domain containing 1A [Homo sapiens]     30   5.1  
gi|139948432 adlican [Homo sapiens]                                    30   5.1  
gi|164698517 MAM domain containing 1 isoform 1 [Homo sapiens]          30   6.7  
gi|38158013 MAM domain containing 1 isoform 2 [Homo sapiens]           30   6.7  
gi|169214154 PREDICTED: hypothetical protein [Homo sapiens]            29   8.7  
gi|169213511 PREDICTED: hypothetical protein [Homo sapiens]            29   8.7  

>gi|42560227 recombining binding protein suppressor of hairless
           isoform 1 [Homo sapiens]
          Length = 500

 Score = 1025 bits (2651), Expect = 0.0
 Identities = 500/500 (100%), Positives = 500/500 (100%)

Query: 1   MDHTEGSPAEEPPAHAPSPGKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSY 60
           MDHTEGSPAEEPPAHAPSPGKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSY
Sbjct: 1   MDHTEGSPAEEPPAHAPSPGKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSY 60

Query: 61  GNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGK 120
           GNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGK
Sbjct: 61  GNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGK 120

Query: 121 NYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLC 180
           NYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLC
Sbjct: 121 NYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLC 180

Query: 181 IASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDG 240
           IASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDG
Sbjct: 181 IASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDG 240

Query: 241 YIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCL 300
           YIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCL
Sbjct: 241 YIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCL 300

Query: 301 SQERIIQFQATPCPKEPNKEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESL 360
           SQERIIQFQATPCPKEPNKEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESL
Sbjct: 301 SQERIIQFQATPCPKEPNKEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESL 360

Query: 361 QLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQ 420
           QLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQ
Sbjct: 361 QLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQ 420

Query: 421 PVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGS 480
           PVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGS
Sbjct: 421 PVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGS 480

Query: 481 YTNASTNSTSVTSSTATVVS 500
           YTNASTNSTSVTSSTATVVS
Sbjct: 481 YTNASTNSTSVTSSTATVVS 500


>gi|42560229 recombining binding protein suppressor of hairless
           isoform 2 [Homo sapiens]
          Length = 487

 Score =  984 bits (2543), Expect = 0.0
 Identities = 481/481 (100%), Positives = 481/481 (100%)

Query: 20  GKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCVYLMGSG 79
           GKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCVYLMGSG
Sbjct: 7   GKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCVYLMGSG 66

Query: 80  WKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDSDKRKHF 139
           WKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDSDKRKHF
Sbjct: 67  WKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDSDKRKHF 126

Query: 140 MLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVS 199
           MLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVS
Sbjct: 127 MLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVS 186

Query: 200 TRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMAL 259
           TRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMAL
Sbjct: 187 TRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMAL 246

Query: 260 PRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPNK 319
           PRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPNK
Sbjct: 247 PRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPNK 306

Query: 320 EMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFT 379
           EMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFT
Sbjct: 307 EMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFT 366

Query: 380 PNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTS 439
           PNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTS
Sbjct: 367 PNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTS 426

Query: 440 LTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGSYTNASTNSTSVTSSTATVV 499
           LTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGSYTNASTNSTSVTSSTATVV
Sbjct: 427 LTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGSYTNASTNSTSVTSSTATVV 486

Query: 500 S 500
           S
Sbjct: 487 S 487


>gi|42560223 recombining binding protein suppressor of hairless
           isoform 4 [Homo sapiens]
          Length = 486

 Score =  981 bits (2537), Expect = 0.0
 Identities = 480/480 (100%), Positives = 480/480 (100%)

Query: 21  KFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCVYLMGSGW 80
           KFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCVYLMGSGW
Sbjct: 7   KFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCVYLMGSGW 66

Query: 81  KKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDSDKRKHFM 140
           KKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDSDKRKHFM
Sbjct: 67  KKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDSDKRKHFM 126

Query: 141 LSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVST 200
           LSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVST
Sbjct: 127 LSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVST 186

Query: 201 RYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALP 260
           RYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALP
Sbjct: 187 RYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALP 246

Query: 261 RLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPNKE 320
           RLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPNKE
Sbjct: 247 RLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPNKE 306

Query: 321 MINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFTP 380
           MINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFTP
Sbjct: 307 MINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFTP 366

Query: 381 NLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTSL 440
           NLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTSL
Sbjct: 367 NLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTSL 426

Query: 441 TFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGSYTNASTNSTSVTSSTATVVS 500
           TFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGSYTNASTNSTSVTSSTATVVS
Sbjct: 427 TFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGSYTNASTNSTSVTSSTATVVS 486


>gi|42560225 recombining binding protein suppressor of hairless
           isoform 3 [Homo sapiens]
          Length = 485

 Score =  981 bits (2537), Expect = 0.0
 Identities = 480/480 (100%), Positives = 480/480 (100%)

Query: 21  KFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCVYLMGSGW 80
           KFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCVYLMGSGW
Sbjct: 6   KFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCVYLMGSGW 65

Query: 81  KKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDSDKRKHFM 140
           KKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDSDKRKHFM
Sbjct: 66  KKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDSDKRKHFM 125

Query: 141 LSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVST 200
           LSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVST
Sbjct: 126 LSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVST 185

Query: 201 RYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALP 260
           RYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALP
Sbjct: 186 RYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALP 245

Query: 261 RLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPNKE 320
           RLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPNKE
Sbjct: 246 RLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPNKE 305

Query: 321 MINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFTP 380
           MINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFTP
Sbjct: 306 MINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFTP 365

Query: 381 NLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTSL 440
           NLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTSL
Sbjct: 366 NLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTSL 425

Query: 441 TFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGSYTNASTNSTSVTSSTATVVS 500
           TFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGSYTNASTNSTSVTSSTATVVS
Sbjct: 426 TFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGSYTNASTNSTSVTSSTATVVS 485


>gi|34577081 recombining binding protein L [Homo sapiens]
          Length = 517

 Score =  489 bits (1258), Expect = e-138
 Identities = 240/438 (54%), Positives = 314/438 (71%), Gaps = 12/438 (2%)

Query: 26  PPPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCVYLMGSGWKKKKE 85
           P    + R  +R  L+++ +QTV ILHAKVAQKSYGNEKRFFCPPPCVYL G GW+ K  
Sbjct: 47  PEHTTILRGGVRRCLQQQCEQTVRILHAKVAQKSYGNEKRFFCPPPCVYLSGPGWRVKPG 106

Query: 86  QMERDGCSEQESQPCAFIGIGN---SDQEMQQLNLE----GKNYCTAKTLYISDSDKRKH 138
           Q +     E     C ++G+ +   S  E Q+LN E     + +  AKTLYISD+DKRKH
Sbjct: 107 QDQAHQAGETGPTVCGYMGLDSASGSATETQKLNFEQQPDSREFGCAKTLYISDADKRKH 166

Query: 139 FMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTV 198
           F L +++      ++G F S+ IKVISKPS+KKQSLKN DLCI+SG+KV+LFNRLRSQTV
Sbjct: 167 FRLVLRLVLRGGRELGTFHSRLIKVISKPSQKKQSLKNTDLCISSGSKVSLFNRLRSQTV 226

Query: 199 STRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMA 258
           STRYL VE G F AS++QW AF +HL D   ++G+ F  R+GY+ YG  V+LVC+VTG+ 
Sbjct: 227 STRYLSVEDGAFVASARQWAAFTLHLADGHSAQGD-FPPREGYVRYGSLVQLVCTVTGIT 285

Query: 259 LPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTER----MYLCLSQERIIQFQATPCP 314
           LP +IIRKV KQ ALLD D+P+SQLHKCAF    +       YLCL+ E+++QFQA+PCP
Sbjct: 286 LPPMIIRKVAKQCALLDVDEPISQLHKCAFQFPGSPPGGGGTYLCLATEKVVQFQASPCP 345

Query: 315 KEPNKEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELT 374
           KE N+ ++ND + WTII T+  E++F   +   L PVTPVP++ +L+L+GGGDVA LEL 
Sbjct: 346 KEANRALLNDSSCWTIIGTESVEFSFSTSLACTLEPVTPVPLISTLELSGGGDVATLELH 405

Query: 375 GQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGI 434
           G+NF   L+VWFGDVEAETMYR   S++CVVPD++AF   WRW+R P+ +P++LVR DG+
Sbjct: 406 GENFHAGLKVWFGDVEAETMYRSPRSLVCVVPDVAAFCSDWRWLRAPITIPMSLVRADGL 465

Query: 435 IYSTSLTFTYTPEPGPRP 452
            Y ++ +FTYTPE   RP
Sbjct: 466 FYPSAFSFTYTPEYSVRP 483


>gi|24497506 forkhead box A3 [Homo sapiens]
          Length = 350

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 13/27 (48%), Positives = 18/27 (66%)

Query: 334 DKAEYTFYEGMGPVLAPVTPVPVVESL 360
           D AE+++Y   G V +PVTPVP +  L
Sbjct: 11  DLAEWSYYPEAGEVYSPVTPVPTMAPL 37


>gi|96974985 coiled-coil and C2 domain containing 1A [Homo sapiens]
          Length = 951

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 11/62 (17%)

Query: 7   SPAEEPPAHAPSPGKFGERPPPKRLTREAMRNYL----------KERGDQTVLILHAKVA 56
           SP  +PP  A +P    E PPP R   EA+   +          K +GDQ    +H ++ 
Sbjct: 324 SPPSQPPTPATAPST-TEVPPPPRTLLEALEQRMERYQVAAAQAKSKGDQRKARMHERIV 382

Query: 57  QK 58
           ++
Sbjct: 383 KQ 384


>gi|139948432 adlican [Homo sapiens]
          Length = 2828

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 6/70 (8%)

Query: 242  IHYGQTVKLVCSVTGMALPRLIIRKVDKQ--TALLDADDPVSQLHKCAFYLKDTERM--- 296
            + YG T+KL CS +G   PR++ R   K+   AL   D  +         +K        
Sbjct: 2158 VRYGGTLKLDCSASGDPWPRILWRLPSKRMIDALFSFDSRIKVFANGTLVVKSVTDKDAG 2217

Query: 297  -YLCLSQERI 305
             YLC+++ ++
Sbjct: 2218 DYLCVARNKV 2227


>gi|164698517 MAM domain containing 1 isoform 1 [Homo sapiens]
          Length = 956

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 245 GQTVKLVCSVTGMALPRLIIRKVDKQTALLD 275
           G T++L C VTG   P ++  + DK+ A+ D
Sbjct: 458 GDTIELQCQVTGKPKPIILWSRADKEVAMPD 488


>gi|38158013 MAM domain containing 1 isoform 2 [Homo sapiens]
          Length = 727

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 245 GQTVKLVCSVTGMALPRLIIRKVDKQTALLD 275
           G T++L C VTG   P ++  + DK+ A+ D
Sbjct: 229 GDTIELQCQVTGKPKPIILWSRADKEVAMPD 259


>gi|169214154 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 737

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 3/63 (4%)

Query: 437 STS-LTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGSY-TNASTNSTSVTSS 494
           STS L+ T TP P P    S     + +NSS    + +++ S  S+ T++ T STS+TS+
Sbjct: 86  STSVLSSTITPAP-PMSVLSHHTLHITSNSSTSSSSTTSSTSTSSFITSSFTTSTSITST 144

Query: 495 TAT 497
           ++T
Sbjct: 145 SST 147


>gi|169213511 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 737

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 3/63 (4%)

Query: 437 STS-LTFTYTPEPGPRPHCSAAGAILRANSSQVPPNESNTNSEGSY-TNASTNSTSVTSS 494
           STS L+ T TP P P    S     + +NSS    + +++ S  S+ T++ T STS+TS+
Sbjct: 86  STSVLSSTITPAP-PMSVLSHHTLHITSNSSTSSSSTTSSTSTSSFITSSFTTSTSITST 144

Query: 495 TAT 497
           ++T
Sbjct: 145 SST 147


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.132    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,280,262
Number of Sequences: 37866
Number of extensions: 1032843
Number of successful extensions: 3923
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3896
Number of HSP's gapped (non-prelim): 28
length of query: 500
length of database: 18,247,518
effective HSP length: 106
effective length of query: 394
effective length of database: 14,233,722
effective search space: 5608086468
effective search space used: 5608086468
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.