Search of human proteins with 126091070

Search of human proteins with 126091070

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|126091070 sperm associated antigen 11B isoform E precursor
[Homo sapiens]
         (80 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|126091070 sperm associated antigen 11B isoform E precursor [H...   177   1e-45
gi|126131097 sperm associated antigen 11B isoform D preproprotei...   142   4e-35
gi|126091042 sperm associated antigen 11B isoform G preproprotei...    66   7e-12
gi|126032340 sperm associated antigen 11A [Homo sapiens]               59   8e-10
gi|71999151 sperm associated antigen 11B isoform B precursor [Ho...    40   5e-04
gi|120587019 zinc finger protein 318 [Homo sapiens]                    30   0.32 
gi|8923890 defensin, beta 103A precursor [Homo sapiens]                30   0.42 
gi|125656159 beta-defensin 103B precursor [Homo sapiens]               30   0.42 
gi|239743453 PREDICTED: hypothetical protein XP_002342852 [Homo ...    29   0.93 
gi|4826692 defensin, beta 4 precursor [Homo sapiens]                   29   0.93 
gi|82734219 beta-defensin 114 [Homo sapiens]                           28   1.6  
gi|50845407 chromosome 22 open reading frame 13 [Homo sapiens]         28   1.6  
gi|148833506 obscurin, cytoskeletal calmodulin and titin-interac...    28   2.1  
gi|157502173 hypothetical protein LOC348487 [Homo sapiens]             27   4.6  
gi|24308527 stereocilin [Homo sapiens]                                 26   7.8  
gi|83582794 beta-defensin 110 [Homo sapiens]                           26   7.8  

>gi|126091070 sperm associated antigen 11B isoform E precursor
          [Homo sapiens]
          Length = 80

 Score =  177 bits (450), Expect = 1e-45
 Identities = 80/80 (100%), Positives = 80/80 (100%)

Query: 1  MKVFFLFAVLFCLVQTNSGDVPPGIRNTICHMQQGICRLFFCHSGEKKRDICSDPWNRCC 60
          MKVFFLFAVLFCLVQTNSGDVPPGIRNTICHMQQGICRLFFCHSGEKKRDICSDPWNRCC
Sbjct: 1  MKVFFLFAVLFCLVQTNSGDVPPGIRNTICHMQQGICRLFFCHSGEKKRDICSDPWNRCC 60

Query: 61 VSNTDEEGKEKPEMDGRSGI 80
          VSNTDEEGKEKPEMDGRSGI
Sbjct: 61 VSNTDEEGKEKPEMDGRSGI 80


>gi|126131097 sperm associated antigen 11B isoform D preproprotein
           [Homo sapiens]
          Length = 133

 Score =  142 bits (359), Expect = 4e-35
 Identities = 62/62 (100%), Positives = 62/62 (100%)

Query: 19  GDVPPGIRNTICHMQQGICRLFFCHSGEKKRDICSDPWNRCCVSNTDEEGKEKPEMDGRS 78
           GDVPPGIRNTICHMQQGICRLFFCHSGEKKRDICSDPWNRCCVSNTDEEGKEKPEMDGRS
Sbjct: 72  GDVPPGIRNTICHMQQGICRLFFCHSGEKKRDICSDPWNRCCVSNTDEEGKEKPEMDGRS 131

Query: 79  GI 80
           GI
Sbjct: 132 GI 133


>gi|126091042 sperm associated antigen 11B isoform G preproprotein
          [Homo sapiens]
          Length = 108

 Score = 65.9 bits (159), Expect = 7e-12
 Identities = 27/27 (100%), Positives = 27/27 (100%)

Query: 19 GDVPPGIRNTICHMQQGICRLFFCHSG 45
          GDVPPGIRNTICHMQQGICRLFFCHSG
Sbjct: 72 GDVPPGIRNTICHMQQGICRLFFCHSG 98


>gi|126032340 sperm associated antigen 11A [Homo sapiens]
          Length = 108

 Score = 58.9 bits (141), Expect = 8e-10
 Identities = 25/27 (92%), Positives = 25/27 (92%)

Query: 19 GDVPPGIRNTICHMQQGICRLFFCHSG 45
          GDVP GIRNTIC MQQGICRLFFCHSG
Sbjct: 72 GDVPLGIRNTICRMQQGICRLFFCHSG 98


>gi|71999151 sperm associated antigen 11B isoform B precursor
          [Homo sapiens]
          Length = 50

 Score = 39.7 bits (91), Expect = 5e-04
 Identities = 18/18 (100%), Positives = 18/18 (100%)

Query: 1  MKVFFLFAVLFCLVQTNS 18
          MKVFFLFAVLFCLVQTNS
Sbjct: 1  MKVFFLFAVLFCLVQTNS 18


>gi|120587019 zinc finger protein 318 [Homo sapiens]
          Length = 2279

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 4/44 (9%)

Query: 27   NTICHMQQGICRLFFCHSGEKKRDICSDPWNRCCVSNTDEEGKE 70
            NTIC    G    FF H   KK     DP+NR   S T  E K+
Sbjct: 1072 NTIC----GTMFDFFTHMHNKKHTQTLDPYNRPWASKTQSEAKQ 1111


>gi|8923890 defensin, beta 103A precursor [Homo sapiens]
          Length = 67

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 6/61 (9%)

Query: 4  FFLFAVLFCLVQTNSGDVPPGIRNTI----CHMQQGICRLFFCHSGEKKRDICSDPWNRC 59
          + LFA+LF  +    G    GI NT+    C ++ G C +  C   E++   CS    +C
Sbjct: 5  YLLFALLFLFLVPVPGH--GGIINTLQKYYCRVRGGRCAVLSCLPKEEQIGKCSTRGRKC 62

Query: 60 C 60
          C
Sbjct: 63 C 63


>gi|125656159 beta-defensin 103B precursor [Homo sapiens]
          Length = 67

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 6/61 (9%)

Query: 4  FFLFAVLFCLVQTNSGDVPPGIRNTI----CHMQQGICRLFFCHSGEKKRDICSDPWNRC 59
          + LFA+LF  +    G    GI NT+    C ++ G C +  C   E++   CS    +C
Sbjct: 5  YLLFALLFLFLVPVPGH--GGIINTLQKYYCRVRGGRCAVLSCLPKEEQIGKCSTRGRKC 62

Query: 60 C 60
          C
Sbjct: 63 C 63


>gi|239743453 PREDICTED: hypothetical protein XP_002342852 [Homo
          sapiens]
          Length = 64

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)

Query: 3  VFFLFAVLFCLVQTNSGDVPPGIRNTICHMQQG-ICRLFFCHSGEKKRDICSDPWNRCC 60
          ++ LF+ LF  +    G V  GI + +  ++ G IC   FC    K+   C  P  +CC
Sbjct: 4  LYLLFSFLFIFLMPLPG-VFGGIGDPVTCLKSGAICHPVFCPRRYKQIGTCGLPGTKCC 61


>gi|4826692 defensin, beta 4 precursor [Homo sapiens]
          Length = 64

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)

Query: 3  VFFLFAVLFCLVQTNSGDVPPGIRNTICHMQQG-ICRLFFCHSGEKKRDICSDPWNRCC 60
          ++ LF+ LF  +    G V  GI + +  ++ G IC   FC    K+   C  P  +CC
Sbjct: 4  LYLLFSFLFIFLMPLPG-VFGGIGDPVTCLKSGAICHPVFCPRRYKQIGTCGLPGTKCC 61


>gi|82734219 beta-defensin 114 [Homo sapiens]
          Length = 69

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 30 CHMQQGICRLFFCHSGEKKRDICSDPWNRCCVSNTDEE 67
          C  + G C+   C   EK+ DICS P   CC     EE
Sbjct: 29 CTKRYGRCKRD-CLESEKQIDICSLPRKICCTEKLYEE 65


>gi|50845407 chromosome 22 open reading frame 13 [Homo sapiens]
          Length = 240

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 25  IRNTICHMQQGICRLFFCHSGEKKRDICSDPWNRCC 60
           +++   H+ QG   +   +SG    D+CS P   CC
Sbjct: 133 VKDIQAHLAQGHVAIVLVNSGVLHCDLCSSPVKYCC 168


>gi|148833506 obscurin, cytoskeletal calmodulin and titin-interacting
            RhoGEF isoform b [Homo sapiens]
          Length = 7968

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 7/47 (14%)

Query: 24   GIRNTICHMQQGICRLFFCHSGEK-------KRDICSDPWNRCCVSN 63
            G R+    +++G+ RL  C++G         +  +C+ PW R C S+
Sbjct: 7871 GARDLQRGLRKGLVRLSRCYAGLSGGAVAFLRSTLCAQPWGRPCASS 7917


>gi|157502173 hypothetical protein LOC348487 [Homo sapiens]
          Length = 280

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)

Query: 46 EKKRDICSDPWNRC 59
          +K+ D C DPW RC
Sbjct: 47 DKQMDFCWDPWQRC 60


>gi|24308527 stereocilin [Homo sapiens]
          Length = 1775

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 12/24 (50%), Positives = 13/24 (54%)

Query: 55   PWNRCCVSNTDEEGKEKPEMDGRS 78
            P  R  V+    EGKE PE  GRS
Sbjct: 1726 PEQRRAVAWAQHEGKESPEQQGRS 1749


>gi|83582794 beta-defensin 110 [Homo sapiens]
          Length = 62

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 1/61 (1%)

Query: 1  MKVFFLFAVLFCLVQTNSGDVPPGIRNTICHMQQGICRLFFCHSGEKKRDICSDPWNRCC 60
          +++FF     +  +     +  P  R   C   +GIC+  FC   E     C    ++CC
Sbjct: 3  IQLFFFILHFWVTILPARSNFEPKYRFERCEKVRGICKT-FCDDVEYDYGYCIKWRSQCC 61

Query: 61 V 61
          V
Sbjct: 62 V 62


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.142    0.483 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,751,193
Number of Sequences: 37866
Number of extensions: 155569
Number of successful extensions: 381
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 369
Number of HSP's gapped (non-prelim): 16
length of query: 80
length of database: 18,247,518
effective HSP length: 52
effective length of query: 28
effective length of database: 16,278,486
effective search space: 455797608
effective search space used: 455797608
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.