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Search of human proteins with 12597633
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|12597633 RAN binding protein 17 [Homo sapiens]
(1088 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|12597633 RAN binding protein 17 [Homo sapiens] 2164 0.0
gi|154448892 exportin 7 isoform b [Homo sapiens] 1502 0.0
gi|154448896 exportin 7 isoform c [Homo sapiens] 1496 0.0
gi|154448894 exportin 7 isoform a [Homo sapiens] 1496 0.0
gi|148886661 exportin 4 [Homo sapiens] 73 1e-12
gi|55770858 golgi SNAP receptor complex member 1 isoform 2 [Homo... 33 1.5
gi|18201905 glucose phosphate isomerase [Homo sapiens] 32 2.5
gi|109452589 family with sequence similarity 98, member B isofor... 32 4.3
gi|109452587 family with sequence similarity 98, member B isofor... 32 4.3
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens] 31 5.6
gi|120587023 down-regulated in metastasis [Homo sapiens] 31 5.6
gi|89036565 PREDICTED: similar to Temporarily Assigned Gene name... 31 5.6
gi|54234040 vacuolar protein sorting 54 isoform 2 [Homo sapiens] 31 5.6
gi|54234034 vacuolar protein sorting 54 isoform 1 [Homo sapiens] 31 5.6
gi|13775238 plasmalemma vesicle associated protein [Homo sapiens] 30 9.5
>gi|12597633 RAN binding protein 17 [Homo sapiens]
Length = 1088
Score = 2164 bits (5608), Expect = 0.0
Identities = 1088/1088 (100%), Positives = 1088/1088 (100%)
Query: 1 MALHFQSLAELEVLCTHLYIGTDLTQRIEAEKALLELIDSPECLSKCQLLLEQGTTSYAQ 60
MALHFQSLAELEVLCTHLYIGTDLTQRIEAEKALLELIDSPECLSKCQLLLEQGTTSYAQ
Sbjct: 1 MALHFQSLAELEVLCTHLYIGTDLTQRIEAEKALLELIDSPECLSKCQLLLEQGTTSYAQ 60
Query: 61 LLAATCLSKLVSRVSPLPVEQRMDIRNYILNYVASQPKLAPFVIQALIQVIAKITKLGWF 120
LLAATCLSKLVSRVSPLPVEQRMDIRNYILNYVASQPKLAPFVIQALIQVIAKITKLGWF
Sbjct: 61 LLAATCLSKLVSRVSPLPVEQRMDIRNYILNYVASQPKLAPFVIQALIQVIAKITKLGWF 120
Query: 121 EVQKDQFVFREIIADVKKFLQGTVEHCIIGVIILSELTQEMNLVDYSRPSAKHRKIATSF 180
EVQKDQFVFREIIADVKKFLQGTVEHCIIGVIILSELTQEMNLVDYSRPSAKHRKIATSF
Sbjct: 121 EVQKDQFVFREIIADVKKFLQGTVEHCIIGVIILSELTQEMNLVDYSRPSAKHRKIATSF 180
Query: 181 RDTSLKDVLVLACSLLKEVFAKPLNLQDQCQQNLVMQVLKLVLNCLNFDFIGSSADESAD 240
RDTSLKDVLVLACSLLKEVFAKPLNLQDQCQQNLVMQVLKLVLNCLNFDFIGSSADESAD
Sbjct: 181 RDTSLKDVLVLACSLLKEVFAKPLNLQDQCQQNLVMQVLKLVLNCLNFDFIGSSADESAD 240
Query: 241 DLCTVQIPTTWRTIFLEPETLDLFFNLYHSLPPLLSQLALSCLVQFASTRRSLFNSPERA 300
DLCTVQIPTTWRTIFLEPETLDLFFNLYHSLPPLLSQLALSCLVQFASTRRSLFNSPERA
Sbjct: 241 DLCTVQIPTTWRTIFLEPETLDLFFNLYHSLPPLLSQLALSCLVQFASTRRSLFNSPERA 300
Query: 301 KYLGNLIKGVKRILENPQGLSDPGNYHEFCRFLARLKTNYQLGELVMVKEYPEVIRLIAN 360
KYLGNLIKGVKRILENPQGLSDPGNYHEFCRFLARLKTNYQLGELVMVKEYPEVIRLIAN
Sbjct: 301 KYLGNLIKGVKRILENPQGLSDPGNYHEFCRFLARLKTNYQLGELVMVKEYPEVIRLIAN 360
Query: 361 FTITSLQHWEFAPNSVHYLLTLWQRMVASVPFVKSTEPHLLDTYAPEITKAFITSRLDSV 420
FTITSLQHWEFAPNSVHYLLTLWQRMVASVPFVKSTEPHLLDTYAPEITKAFITSRLDSV
Sbjct: 361 FTITSLQHWEFAPNSVHYLLTLWQRMVASVPFVKSTEPHLLDTYAPEITKAFITSRLDSV 420
Query: 421 AIVVRDHLDDPLDDTATVFQQLEQLCTVSRCEYEKTCALLVQLFDQNAQNYQKLLHPYSG 480
AIVVRDHLDDPLDDTATVFQQLEQLCTVSRCEYEKTCALLVQLFDQNAQNYQKLLHPYSG
Sbjct: 421 AIVVRDHLDDPLDDTATVFQQLEQLCTVSRCEYEKTCALLVQLFDQNAQNYQKLLHPYSG 480
Query: 481 VTVDITIQEGRLAWLVYLVGTVVGGRLTYTSTDEHDAMDGELSCRVFQLISLMDTGLPRC 540
VTVDITIQEGRLAWLVYLVGTVVGGRLTYTSTDEHDAMDGELSCRVFQLISLMDTGLPRC
Sbjct: 481 VTVDITIQEGRLAWLVYLVGTVVGGRLTYTSTDEHDAMDGELSCRVFQLISLMDTGLPRC 540
Query: 541 CNEKIELAILWFLDQFRKTYVGDQLQRTSKVYARMSEVLGITDDNHVLETFMTKIVTNLK 600
CNEKIELAILWFLDQFRKTYVGDQLQRTSKVYARMSEVLGITDDNHVLETFMTKIVTNLK
Sbjct: 541 CNEKIELAILWFLDQFRKTYVGDQLQRTSKVYARMSEVLGITDDNHVLETFMTKIVTNLK 600
Query: 601 YWGRYEPVISRTLQFLNDLSVGYILLKKLVKIDAVKFMLKNHTSEHFPFLGISDNHSLSD 660
YWGRYEPVISRTLQFLNDLSVGYILLKKLVKIDAVKFMLKNHTSEHFPFLGISDNHSLSD
Sbjct: 601 YWGRYEPVISRTLQFLNDLSVGYILLKKLVKIDAVKFMLKNHTSEHFPFLGISDNHSLSD 660
Query: 661 FRCRTTFYTALTRLLMVDLGEDEDEFENFMLPLTVAFETVLQIFNNNFKQEDVKRMLIGL 720
FRCRTTFYTALTRLLMVDLGEDEDEFENFMLPLTVAFETVLQIFNNNFKQEDVKRMLIGL
Sbjct: 661 FRCRTTFYTALTRLLMVDLGEDEDEFENFMLPLTVAFETVLQIFNNNFKQEDVKRMLIGL 720
Query: 721 ARDLRGIAFALNTKTSYTMLFDWMYPTYLPLLQNAVERWYGEPTCTTPILKLMAELMQNR 780
ARDLRGIAFALNTKTSYTMLFDWMYPTYLPLLQNAVERWYGEPTCTTPILKLMAELMQNR
Sbjct: 721 ARDLRGIAFALNTKTSYTMLFDWMYPTYLPLLQNAVERWYGEPTCTTPILKLMAELMQNR 780
Query: 781 SQRLNFDVSSPNGILLFREASKMVCTYGNQILSLGSLSKDQIYPMKLKGISICYSALKSA 840
SQRLNFDVSSPNGILLFREASKMVCTYGNQILSLGSLSKDQIYPMKLKGISICYSALKSA
Sbjct: 781 SQRLNFDVSSPNGILLFREASKMVCTYGNQILSLGSLSKDQIYPMKLKGISICYSALKSA 840
Query: 841 LCGNYVSFGVFKLYGDNHFDNVLQAFVKMLLSVSHSDLLQYRKLSQSYYPLLECLTQDHM 900
LCGNYVSFGVFKLYGDNHFDNVLQAFVKMLLSVSHSDLLQYRKLSQSYYPLLECLTQDHM
Sbjct: 841 LCGNYVSFGVFKLYGDNHFDNVLQAFVKMLLSVSHSDLLQYRKLSQSYYPLLECLTQDHM 900
Query: 901 SFIINLEPPVLMYVLTSISEGLTTLDTVVSSSCCTSLDYIVTYLFKHIAKEGKKPLRCRE 960
SFIINLEPPVLMYVLTSISEGLTTLDTVVSSSCCTSLDYIVTYLFKHIAKEGKKPLRCRE
Sbjct: 901 SFIINLEPPVLMYVLTSISEGLTTLDTVVSSSCCTSLDYIVTYLFKHIAKEGKKPLRCRE 960
Query: 961 ATQAGQRLLHFMQQNPDVLQQMMSVLMNTIVFEDCRNQWSVSRPLLGLILLNEKYFSELR 1020
ATQAGQRLLHFMQQNPDVLQQMMSVLMNTIVFEDCRNQWSVSRPLLGLILLNEKYFSELR
Sbjct: 961 ATQAGQRLLHFMQQNPDVLQQMMSVLMNTIVFEDCRNQWSVSRPLLGLILLNEKYFSELR 1020
Query: 1021 ASLINSQPLPKQEVLAQCFRNLMEGVEQNLSVKNRDRFTQNLSVFRRDVAEALRSDGNTE 1080
ASLINSQPLPKQEVLAQCFRNLMEGVEQNLSVKNRDRFTQNLSVFRRDVAEALRSDGNTE
Sbjct: 1021 ASLINSQPLPKQEVLAQCFRNLMEGVEQNLSVKNRDRFTQNLSVFRRDVAEALRSDGNTE 1080
Query: 1081 PCSLDMMS 1088
PCSLDMMS
Sbjct: 1081 PCSLDMMS 1088
>gi|154448892 exportin 7 isoform b [Homo sapiens]
Length = 1087
Score = 1502 bits (3888), Expect = 0.0
Identities = 723/1077 (67%), Positives = 896/1077 (83%), Gaps = 4/1077 (0%)
Query: 1 MALHFQSLAELEVLCTHLYIGTDLTQRIEAEKALLELIDSPECLSKCQLLLEQGTTSYAQ 60
MA H QSLA+LE LC LY TD T R++AEKAL+E +SP+CLSKCQLLLE+G++SY+Q
Sbjct: 1 MADHVQSLAQLENLCKQLYETTDTTTRLQAEKALVEFTNSPDCLSKCQLLLERGSSSYSQ 60
Query: 61 LLAATCLSKLVSRVS-PLPVEQRMDIRNYILNYVASQPKLAPFVIQALIQVIAKITKLGW 119
LLAATCL+KLVSR + PLP+EQR+DIRNY+LNY+A++PKLA FV QALIQ+ A+ITKLGW
Sbjct: 61 LLAATCLTKLVSRTNNPLPLEQRIDIRNYVLNYLATRPKLATFVTQALIQLYARITKLGW 120
Query: 120 FEVQKDQFVFREIIADVKKFLQGTVEHCIIGVIILSELTQEMNLVDYSRPSAKHRKIATS 179
F+ QKD +VFR I DV +FLQ +VE+CIIGV ILS+LT E+N D + P KHRKIA+S
Sbjct: 121 FDCQKDDYVFRNAITDVTRFLQDSVEYCIIGVTILSQLTNEINQADTTHPLTKHRKIASS 180
Query: 180 FRDTSLKDVLVLACSLLKEVFAKPLNLQDQCQQNLVMQVLKLVLNCLNFDFIGSSADESA 239
FRD+SL D+ L+C+LLK+ K LNL D+ Q L+MQ+LKL NCLNFDFIG+S DES+
Sbjct: 181 FRDSSLFDIFTLSCNLLKQASGKNLNLNDESQHGLLMQLLKLTHNCLNFDFIGTSTDESS 240
Query: 240 DDLCTVQIPTTWRTIFLEPETLDLFFNLYHSLPPLLSQLALSCLVQFASTRRSLFNSPER 299
DDLCTVQIPT+WR+ FL+ TL LFF+LYHS+PP S L LSCLVQ AS RRSLFN+ ER
Sbjct: 241 DDLCTVQIPTSWRSAFLDSSTLQLFFDLYHSIPPSFSPLVLSCLVQIASVRRSLFNNAER 300
Query: 300 AKYLGNLIKGVKRILENPQGLSDPGNYHEFCRFLARLKTNYQLGELVMVKEYPEVIRLIA 359
AK+L +L+ GVKRILENPQ LSDP NYHEFCR LARLK+NYQLGELV V+ YPEVIRLIA
Sbjct: 301 AKFLSHLVDGVKRILENPQSLSDPNNYHEFCRLLARLKSNYQLGELVKVENYPEVIRLIA 360
Query: 360 NFTITSLQHWEFAPNSVHYLLTLWQRMVASVPFVKSTEPHLLDTYAPEITKAFITSRLDS 419
NFT+TSLQHWEFAPNSVHYLL+LWQR+ ASVP+VK+TEPH+L+TY PE+TKA+ITSRL+S
Sbjct: 361 NFTVTSLQHWEFAPNSVHYLLSLWQRLAASVPYVKATEPHMLETYTPEVTKAYITSRLES 420
Query: 420 VAIVVRDHLDDPLDDTATVFQQLEQLCTVSRCEYEKTCALLVQLFDQNAQNYQKLLHPYS 479
V I++RD L+DPL+DT V QQL+QL T+ RCEYEKTCALLVQLFDQ+AQ+YQ+LL S
Sbjct: 421 VHIILRDGLEDPLEDTGLVQQQLDQLSTIGRCEYEKTCALLVQLFDQSAQSYQELLQSAS 480
Query: 480 GVTVDITIQEGRLAWLVYLVGTVVGGRLTYTSTDEHDAMDGELSCRVFQLISLMDTGLPR 539
+DI +QEGRL WLVY++G V+GGR+++ STDE DAMDGEL CRV QL++L D+ L +
Sbjct: 481 ASPMDIAVQEGRLTWLVYIIGAVIGGRVSFASTDEQDAMDGELVCRVLQLMNLTDSRLAQ 540
Query: 540 CCNEKIELAILWFLDQFRKTYVGDQLQRTSKVYARMSEVLGITDDNHVLETFMTKIVTNL 599
NEK+ELA+L F +QFRK Y+GDQ+Q++SK+Y R+SEVLG+ D+ VL F+ KI+TNL
Sbjct: 541 AGNEKLELAMLSFFEQFRKIYIGDQVQKSSKLYRRLSEVLGLNDETMVLSVFIGKIITNL 600
Query: 600 KYWGRYEPVISRTLQFLNDLSVGYILLKKLVKIDAVKFMLKNHTSEHFPFLGISDNHSLS 659
KYWGR EP+ S+TLQ LNDLS+GY ++KLVK+ AV+FML NHTSEHF FLGI++ +L+
Sbjct: 601 KYWGRCEPITSKTLQLLNDLSIGYSSVRKLVKLSAVQFMLNNHTSEHFSFLGINNQSNLT 660
Query: 660 DFRCRTTFYTALTRLLMVDLGEDEDEFENFMLPLTVAFETVLQIFN-NNFKQEDVKRMLI 718
D RCRTTFYTAL RLLMVDLGEDED++E FMLPLT AFE V Q+F+ N+F +++ KR L+
Sbjct: 661 DMRCRTTFYTALGRLLMVDLGEDEDQYEQFMLPLTAAFEAVAQMFSTNSFNEQEAKRTLV 720
Query: 719 GLARDLRGIAFALNTKTSYTMLFDWMYPTYLPLLQNAVERWYGEPTCTTPILKLMAELMQ 778
GL RDLRGIAFA N KTS+ MLF+W+YP+Y+P+LQ A+E WY +P CTTP+LKLMAEL+
Sbjct: 721 GLVRDLRGIAFAFNAKTSFMMLFEWIYPSYMPILQRAIELWYHDPACTTPVLKLMAELVH 780
Query: 779 NRSQRLNFDVSSPNGILLFREASKMVCTYGNQILSLGSLSKDQIYPMKLKGISICYSALK 838
NRSQRL FDVSSPNGILLFRE SKM+ YGN+IL+LG + KDQ+Y +KLKGISIC+S LK
Sbjct: 781 NRSQRLQFDVSSPNGILLFRETSKMITMYGNRILTLGEVPKDQVYALKLKGISICFSMLK 840
Query: 839 SALCGNYVSFGVFKLYGDNHFDNVLQAFVKMLLSVSHSDLLQYRKLSQSYYPLLECLTQD 898
+AL G+YV+FGVF+LYGD+ DN LQ F+K+LLS+ HSDLL Y KLSQSYY LLE LTQD
Sbjct: 841 AALSGSYVNFGVFRLYGDDALDNALQTFIKLLLSIPHSDLLDYPKLSQSYYSLLEVLTQD 900
Query: 899 HMSFIINLEPPVLMYVLTSISEGLTTLDTVVSSSCCTSLDYIVTYLFKHIAKEGKKPLRC 958
HM+FI +LEP V+MY+L+SISEGLT LDT+V + CC+ LD+IVTYLFK +++ KK R
Sbjct: 901 HMNFIASLEPHVIMYILSSISEGLTALDTMVCTGCCSCLDHIVTYLFKQLSRSTKK--RT 958
Query: 959 REATQAGQRLLHFMQQNPDVLQQMMSVLMNTIVFEDCRNQWSVSRPLLGLILLNEKYFSE 1018
Q R LH MQQ+P+++QQM+S ++N I+FEDCRNQWS+SRPLLGLILLNEKYFS+
Sbjct: 959 TPLNQESDRFLHIMQQHPEMIQQMLSTVLNIIIFEDCRNQWSMSRPLLGLILLNEKYFSD 1018
Query: 1019 LRASLINSQPLPKQEVLAQCFRNLMEGVEQNLSVKNRDRFTQNLSVFRRDVAEALRS 1075
LR S++NSQP KQ+ + CF NLMEG+E+NL KNRDRFTQNLS FRR+V +++++
Sbjct: 1019 LRNSIVNSQPPEKQQAMHLCFENLMEGIERNLLTKNRDRFTQNLSAFRREVNDSMKN 1075
>gi|154448896 exportin 7 isoform c [Homo sapiens]
Length = 1088
Score = 1496 bits (3872), Expect = 0.0
Identities = 719/1072 (67%), Positives = 893/1072 (83%), Gaps = 4/1072 (0%)
Query: 6 QSLAELEVLCTHLYIGTDLTQRIEAEKALLELIDSPECLSKCQLLLEQGTTSYAQLLAAT 65
+SLA+LE LC LY TD T R++AEKAL+E +SP+CLSKCQLLLE+G++SY+QLLAAT
Sbjct: 7 KSLAQLENLCKQLYETTDTTTRLQAEKALVEFTNSPDCLSKCQLLLERGSSSYSQLLAAT 66
Query: 66 CLSKLVSRVS-PLPVEQRMDIRNYILNYVASQPKLAPFVIQALIQVIAKITKLGWFEVQK 124
CL+KLVSR + PLP+EQR+DIRNY+LNY+A++PKLA FV QALIQ+ A+ITKLGWF+ QK
Sbjct: 67 CLTKLVSRTNNPLPLEQRIDIRNYVLNYLATRPKLATFVTQALIQLYARITKLGWFDCQK 126
Query: 125 DQFVFREIIADVKKFLQGTVEHCIIGVIILSELTQEMNLVDYSRPSAKHRKIATSFRDTS 184
D +VFR I DV +FLQ +VE+CIIGV ILS+LT E+N D + P KHRKIA+SFRD+S
Sbjct: 127 DDYVFRNAITDVTRFLQDSVEYCIIGVTILSQLTNEINQADTTHPLTKHRKIASSFRDSS 186
Query: 185 LKDVLVLACSLLKEVFAKPLNLQDQCQQNLVMQVLKLVLNCLNFDFIGSSADESADDLCT 244
L D+ L+C+LLK+ K LNL D+ Q L+MQ+LKL NCLNFDFIG+S DES+DDLCT
Sbjct: 187 LFDIFTLSCNLLKQASGKNLNLNDESQHGLLMQLLKLTHNCLNFDFIGTSTDESSDDLCT 246
Query: 245 VQIPTTWRTIFLEPETLDLFFNLYHSLPPLLSQLALSCLVQFASTRRSLFNSPERAKYLG 304
VQIPT+WR+ FL+ TL LFF+LYHS+PP S L LSCLVQ AS RRSLFN+ ERAK+L
Sbjct: 247 VQIPTSWRSAFLDSSTLQLFFDLYHSIPPSFSPLVLSCLVQIASVRRSLFNNAERAKFLS 306
Query: 305 NLIKGVKRILENPQGLSDPGNYHEFCRFLARLKTNYQLGELVMVKEYPEVIRLIANFTIT 364
+L+ GVKRILENPQ LSDP NYHEFCR LARLK+NYQLGELV V+ YPEVIRLIANFT+T
Sbjct: 307 HLVDGVKRILENPQSLSDPNNYHEFCRLLARLKSNYQLGELVKVENYPEVIRLIANFTVT 366
Query: 365 SLQHWEFAPNSVHYLLTLWQRMVASVPFVKSTEPHLLDTYAPEITKAFITSRLDSVAIVV 424
SLQHWEFAPNSVHYLL+LWQR+ ASVP+VK+TEPH+L+TY PE+TKA+ITSRL+SV I++
Sbjct: 367 SLQHWEFAPNSVHYLLSLWQRLAASVPYVKATEPHMLETYTPEVTKAYITSRLESVHIIL 426
Query: 425 RDHLDDPLDDTATVFQQLEQLCTVSRCEYEKTCALLVQLFDQNAQNYQKLLHPYSGVTVD 484
RD L+DPL+DT V QQL+QL T+ RCEYEKTCALLVQLFDQ+AQ+YQ+LL S +D
Sbjct: 427 RDGLEDPLEDTGLVQQQLDQLSTIGRCEYEKTCALLVQLFDQSAQSYQELLQSASASPMD 486
Query: 485 ITIQEGRLAWLVYLVGTVVGGRLTYTSTDEHDAMDGELSCRVFQLISLMDTGLPRCCNEK 544
I +QEGRL WLVY++G V+GGR+++ STDE DAMDGEL CRV QL++L D+ L + NEK
Sbjct: 487 IAVQEGRLTWLVYIIGAVIGGRVSFASTDEQDAMDGELVCRVLQLMNLTDSRLAQAGNEK 546
Query: 545 IELAILWFLDQFRKTYVGDQLQRTSKVYARMSEVLGITDDNHVLETFMTKIVTNLKYWGR 604
+ELA+L F +QFRK Y+GDQ+Q++SK+Y R+SEVLG+ D+ VL F+ KI+TNLKYWGR
Sbjct: 547 LELAMLSFFEQFRKIYIGDQVQKSSKLYRRLSEVLGLNDETMVLSVFIGKIITNLKYWGR 606
Query: 605 YEPVISRTLQFLNDLSVGYILLKKLVKIDAVKFMLKNHTSEHFPFLGISDNHSLSDFRCR 664
EP+ S+TLQ LNDLS+GY ++KLVK+ AV+FML NHTSEHF FLGI++ +L+D RCR
Sbjct: 607 CEPITSKTLQLLNDLSIGYSSVRKLVKLSAVQFMLNNHTSEHFSFLGINNQSNLTDMRCR 666
Query: 665 TTFYTALTRLLMVDLGEDEDEFENFMLPLTVAFETVLQIFN-NNFKQEDVKRMLIGLARD 723
TTFYTAL RLLMVDLGEDED++E FMLPLT AFE V Q+F+ N+F +++ KR L+GL RD
Sbjct: 667 TTFYTALGRLLMVDLGEDEDQYEQFMLPLTAAFEAVAQMFSTNSFNEQEAKRTLVGLVRD 726
Query: 724 LRGIAFALNTKTSYTMLFDWMYPTYLPLLQNAVERWYGEPTCTTPILKLMAELMQNRSQR 783
LRGIAFA N KTS+ MLF+W+YP+Y+P+LQ A+E WY +P CTTP+LKLMAEL+ NRSQR
Sbjct: 727 LRGIAFAFNAKTSFMMLFEWIYPSYMPILQRAIELWYHDPACTTPVLKLMAELVHNRSQR 786
Query: 784 LNFDVSSPNGILLFREASKMVCTYGNQILSLGSLSKDQIYPMKLKGISICYSALKSALCG 843
L FDVSSPNGILLFRE SKM+ YGN+IL+LG + KDQ+Y +KLKGISIC+S LK+AL G
Sbjct: 787 LQFDVSSPNGILLFRETSKMITMYGNRILTLGEVPKDQVYALKLKGISICFSMLKAALSG 846
Query: 844 NYVSFGVFKLYGDNHFDNVLQAFVKMLLSVSHSDLLQYRKLSQSYYPLLECLTQDHMSFI 903
+YV+FGVF+LYGD+ DN LQ F+K+LLS+ HSDLL Y KLSQSYY LLE LTQDHM+FI
Sbjct: 847 SYVNFGVFRLYGDDALDNALQTFIKLLLSIPHSDLLDYPKLSQSYYSLLEVLTQDHMNFI 906
Query: 904 INLEPPVLMYVLTSISEGLTTLDTVVSSSCCTSLDYIVTYLFKHIAKEGKKPLRCREATQ 963
+LEP V+MY+L+SISEGLT LDT+V + CC+ LD+IVTYLFK +++ KK R Q
Sbjct: 907 ASLEPHVIMYILSSISEGLTALDTMVCTGCCSCLDHIVTYLFKQLSRSTKK--RTTPLNQ 964
Query: 964 AGQRLLHFMQQNPDVLQQMMSVLMNTIVFEDCRNQWSVSRPLLGLILLNEKYFSELRASL 1023
R LH MQQ+P+++QQM+S ++N I+FEDCRNQWS+SRPLLGLILLNEKYFS+LR S+
Sbjct: 965 ESDRFLHIMQQHPEMIQQMLSTVLNIIIFEDCRNQWSMSRPLLGLILLNEKYFSDLRNSI 1024
Query: 1024 INSQPLPKQEVLAQCFRNLMEGVEQNLSVKNRDRFTQNLSVFRRDVAEALRS 1075
+NSQP KQ+ + CF NLMEG+E+NL KNRDRFTQNLS FRR+V +++++
Sbjct: 1025 VNSQPPEKQQAMHLCFENLMEGIERNLLTKNRDRFTQNLSAFRREVNDSMKN 1076
>gi|154448894 exportin 7 isoform a [Homo sapiens]
Length = 1096
Score = 1496 bits (3872), Expect = 0.0
Identities = 724/1086 (66%), Positives = 897/1086 (82%), Gaps = 13/1086 (1%)
Query: 1 MALHFQSLAELEVLCTHLYIGTDLTQRIEAEKALLELIDSPECLSKCQLLLEQGTTSYAQ 60
MA H QSLA+LE LC LY TD T R++AEKAL+E +SP+CLSKCQLLLE+G++SY+Q
Sbjct: 1 MADHVQSLAQLENLCKQLYETTDTTTRLQAEKALVEFTNSPDCLSKCQLLLERGSSSYSQ 60
Query: 61 LLAATCLSKLVSRVS-PLPVEQRMDIRNYILNYVASQPKLAPFVIQALIQVIAKITKLGW 119
LLAATCL+KLVSR + PLP+EQR+DIRNY+LNY+A++PKLA FV QALIQ+ A+ITKLGW
Sbjct: 61 LLAATCLTKLVSRTNNPLPLEQRIDIRNYVLNYLATRPKLATFVTQALIQLYARITKLGW 120
Query: 120 FEVQKDQFVFREIIADVKKFLQGTVEHCIIGVIILSELTQEMNLV---------DYSRPS 170
F+ QKD +VFR I DV +FLQ +VE+CIIGV ILS+LT E+N V D + P
Sbjct: 121 FDCQKDDYVFRNAITDVTRFLQDSVEYCIIGVTILSQLTNEINQVSATAFLIEADTTHPL 180
Query: 171 AKHRKIATSFRDTSLKDVLVLACSLLKEVFAKPLNLQDQCQQNLVMQVLKLVLNCLNFDF 230
KHRKIA+SFRD+SL D+ L+C+LLK+ K LNL D+ Q L+MQ+LKL NCLNFDF
Sbjct: 181 TKHRKIASSFRDSSLFDIFTLSCNLLKQASGKNLNLNDESQHGLLMQLLKLTHNCLNFDF 240
Query: 231 IGSSADESADDLCTVQIPTTWRTIFLEPETLDLFFNLYHSLPPLLSQLALSCLVQFASTR 290
IG+S DES+DDLCTVQIPT+WR+ FL+ TL LFF+LYHS+PP S L LSCLVQ AS R
Sbjct: 241 IGTSTDESSDDLCTVQIPTSWRSAFLDSSTLQLFFDLYHSIPPSFSPLVLSCLVQIASVR 300
Query: 291 RSLFNSPERAKYLGNLIKGVKRILENPQGLSDPGNYHEFCRFLARLKTNYQLGELVMVKE 350
RSLFN+ ERAK+L +L+ GVKRILENPQ LSDP NYHEFCR LARLK+NYQLGELV V+
Sbjct: 301 RSLFNNAERAKFLSHLVDGVKRILENPQSLSDPNNYHEFCRLLARLKSNYQLGELVKVEN 360
Query: 351 YPEVIRLIANFTITSLQHWEFAPNSVHYLLTLWQRMVASVPFVKSTEPHLLDTYAPEITK 410
YPEVIRLIANFT+TSLQHWEFAPNSVHYLL+LWQR+ ASVP+VK+TEPH+L+TY PE+TK
Sbjct: 361 YPEVIRLIANFTVTSLQHWEFAPNSVHYLLSLWQRLAASVPYVKATEPHMLETYTPEVTK 420
Query: 411 AFITSRLDSVAIVVRDHLDDPLDDTATVFQQLEQLCTVSRCEYEKTCALLVQLFDQNAQN 470
A+ITSRL+SV I++RD L+DPL+DT V QQL+QL T+ RCEYEKTCALLVQLFDQ+AQ+
Sbjct: 421 AYITSRLESVHIILRDGLEDPLEDTGLVQQQLDQLSTIGRCEYEKTCALLVQLFDQSAQS 480
Query: 471 YQKLLHPYSGVTVDITIQEGRLAWLVYLVGTVVGGRLTYTSTDEHDAMDGELSCRVFQLI 530
YQ+LL S +DI +QEGRL WLVY++G V+GGR+++ STDE DAMDGEL CRV QL+
Sbjct: 481 YQELLQSASASPMDIAVQEGRLTWLVYIIGAVIGGRVSFASTDEQDAMDGELVCRVLQLM 540
Query: 531 SLMDTGLPRCCNEKIELAILWFLDQFRKTYVGDQLQRTSKVYARMSEVLGITDDNHVLET 590
+L D+ L + NEK+ELA+L F +QFRK Y+GDQ+Q++SK+Y R+SEVLG+ D+ VL
Sbjct: 541 NLTDSRLAQAGNEKLELAMLSFFEQFRKIYIGDQVQKSSKLYRRLSEVLGLNDETMVLSV 600
Query: 591 FMTKIVTNLKYWGRYEPVISRTLQFLNDLSVGYILLKKLVKIDAVKFMLKNHTSEHFPFL 650
F+ KI+TNLKYWGR EP+ S+TLQ LNDLS+GY ++KLVK+ AV+FML NHTSEHF FL
Sbjct: 601 FIGKIITNLKYWGRCEPITSKTLQLLNDLSIGYSSVRKLVKLSAVQFMLNNHTSEHFSFL 660
Query: 651 GISDNHSLSDFRCRTTFYTALTRLLMVDLGEDEDEFENFMLPLTVAFETVLQIFN-NNFK 709
GI++ +L+D RCRTTFYTAL RLLMVDLGEDED++E FMLPLT AFE V Q+F+ N+F
Sbjct: 661 GINNQSNLTDMRCRTTFYTALGRLLMVDLGEDEDQYEQFMLPLTAAFEAVAQMFSTNSFN 720
Query: 710 QEDVKRMLIGLARDLRGIAFALNTKTSYTMLFDWMYPTYLPLLQNAVERWYGEPTCTTPI 769
+++ KR L+GL RDLRGIAFA N KTS+ MLF+W+YP+Y+P+LQ A+E WY +P CTTP+
Sbjct: 721 EQEAKRTLVGLVRDLRGIAFAFNAKTSFMMLFEWIYPSYMPILQRAIELWYHDPACTTPV 780
Query: 770 LKLMAELMQNRSQRLNFDVSSPNGILLFREASKMVCTYGNQILSLGSLSKDQIYPMKLKG 829
LKLMAEL+ NRSQRL FDVSSPNGILLFRE SKM+ YGN+IL+LG + KDQ+Y +KLKG
Sbjct: 781 LKLMAELVHNRSQRLQFDVSSPNGILLFRETSKMITMYGNRILTLGEVPKDQVYALKLKG 840
Query: 830 ISICYSALKSALCGNYVSFGVFKLYGDNHFDNVLQAFVKMLLSVSHSDLLQYRKLSQSYY 889
ISIC+S LK+AL G+YV+FGVF+LYGD+ DN LQ F+K+LLS+ HSDLL Y KLSQSYY
Sbjct: 841 ISICFSMLKAALSGSYVNFGVFRLYGDDALDNALQTFIKLLLSIPHSDLLDYPKLSQSYY 900
Query: 890 PLLECLTQDHMSFIINLEPPVLMYVLTSISEGLTTLDTVVSSSCCTSLDYIVTYLFKHIA 949
LLE LTQDHM+FI +LEP V+MY+L+SISEGLT LDT+V + CC+ LD+IVTYLFK ++
Sbjct: 901 SLLEVLTQDHMNFIASLEPHVIMYILSSISEGLTALDTMVCTGCCSCLDHIVTYLFKQLS 960
Query: 950 KEGKKPLRCREATQAGQRLLHFMQQNPDVLQQMMSVLMNTIVFEDCRNQWSVSRPLLGLI 1009
+ KK R Q R LH MQQ+P+++QQM+S ++N I+FEDCRNQWS+SRPLLGLI
Sbjct: 961 RSTKK--RTTPLNQESDRFLHIMQQHPEMIQQMLSTVLNIIIFEDCRNQWSMSRPLLGLI 1018
Query: 1010 LLNEKYFSELRASLINSQPLPKQEVLAQCFRNLMEGVEQNLSVKNRDRFTQNLSVFRRDV 1069
LLNEKYFS+LR S++NSQP KQ+ + CF NLMEG+E+NL KNRDRFTQNLS FRR+V
Sbjct: 1019 LLNEKYFSDLRNSIVNSQPPEKQQAMHLCFENLMEGIERNLLTKNRDRFTQNLSAFRREV 1078
Query: 1070 AEALRS 1075
+++++
Sbjct: 1079 NDSMKN 1084
>gi|148886661 exportin 4 [Homo sapiens]
Length = 1151
Score = 73.2 bits (178), Expect = 1e-12
Identities = 71/299 (23%), Positives = 136/299 (45%), Gaps = 18/299 (6%)
Query: 26 QRIEAEKALLELIDSPECLSKCQLLLEQGTTSYAQLLAATCLSKLVSRVSPLPVEQRMD- 84
QR AE L S + C+ +LE Y AAT + + V R L + ++
Sbjct: 33 QRQHAEHIFLSFRKSKSPFAVCKHILETSKVDYVLFQAATAIMEAVVREWILLEKGSIES 92
Query: 85 IRNYILNYVASQPKLAPFVIQALIQVIAKITKLGWFEVQKD-QFVFREIIADVKKFLQGT 143
+R ++L YV +P L +V + ++ +A I K G + D + +F E ++ + T
Sbjct: 93 LRTFLLTYVLQRPNLQKYVREQILLAVAVIVKRGSLDKSIDCKSIFHE-VSQLISSGNPT 151
Query: 144 VE--HCIIGVIILSELTQEMNLVDYSRPSAKHRKIATSFRDTSLKDVLVLACSLLKEVFA 201
V+ C I +LSE + + H F++ L+ + +L +L+E F+
Sbjct: 152 VQTLACSILTALLSEFSSSSKTSNIGLSMEFHGNCKRVFQEEDLRQIFMLTVEVLQE-FS 210
Query: 202 KPLNLQDQCQQNLVMQVLKLVLNCLNFDFIGSSAD-------ESADDLCTVQIPTTWRTI 254
+ NL Q ++ + L L L+++F+ + ES+ ++ ++ +WR
Sbjct: 211 RRENLNAQ-MSSVFQRYLALANQVLSWNFLPPNLGRHYIAMFESSQNV-LLKPTESWRET 268
Query: 255 FLEPETLDLFFNLYHSL--PPLLSQLALSCLVQFASTRRSLF-NSPERAKYLGNLIKGV 310
L+ ++LFF ++ + ++Q +L CL Q AS +F + + YL + I+G+
Sbjct: 269 LLDSRVMELFFTVHRKIREDSDMAQDSLQCLAQLASLHGPIFPDEGSQVDYLAHFIEGL 327
Score = 52.4 bits (124), Expect = 2e-06
Identities = 111/551 (20%), Positives = 210/551 (38%), Gaps = 66/551 (11%)
Query: 549 ILWFLDQFRKTYVGDQLQRTSKVYARMSEVLGITDDNH--VLETFMTKIVTNLKYWGRYE 606
I+WFL ++ KTY+ + ++ S G + ++ + K+++NL W +
Sbjct: 638 IVWFLKRWAKTYLLVDEKLYDQISLPFSTAFGADTEGSQWIIGYLLQKVISNLSVWSSEQ 697
Query: 607 PVISRTLQFLNDLSVGYILLKKLVKIDAVKFMLKNHTSEHFPFLGISDNHSLSDFRCRTT 666
+ + T+Q L L +++ + + K S P N S +
Sbjct: 698 DLANDTVQLLVTLVERRERANLVIQCENWWNLAKQFASRSPPL-----NFLSSPVQRTLM 752
Query: 667 FYTALTRLLMVDLGEDEDEFENFMLPLTVAFETVL--QIFNNNFKQEDVKRMLIGLARDL 724
L +D + + + PL F V+ + F +QE+VK+ + L
Sbjct: 753 KALVLGGFAHMDTETKQQYWTEVLQPLQQRFLRVINQENFQQMCQQEEVKQEITATLEAL 812
Query: 725 RGIAFALNTKTSYTMLFDWMYPTYLPLLQNAVERWYGEPTCTTPILKLMAELMQNRSQRL 784
GIA A + +LF+++ +L +E + P I+++ E+ +
Sbjct: 813 CGIAEATQID-NVAILFNFLMD-FLTNCIGLMEVYKNTPETVNLIIEVFVEVAHKQ---- 866
Query: 785 NFDVSSPNGILLFREASKM----VCTYGNQILSLGSLSKDQI----YPMKLKGISICYSA 836
I E+ M C Q+ S +L + +I + + + +
Sbjct: 867 ---------ICYLGESKAMNLYEACLTLLQVYSKNNLGRQRIDVTAEEEQYQDLLLIMEL 917
Query: 837 LKSALCGNYVSFG----VFKLYGDNHFDN-------VLQAFVKMLLSVSHSDLLQYRKLS 885
L + L ++ F VF+ + N V+ V ++L + DLL++ L
Sbjct: 918 LTNLLSKEFIDFSDTDEVFRGHEPGQAANRSVSAADVVLYGVNLILPLMSQDLLKFPTLC 977
Query: 886 QSYYPLLECLTQDHMSFIINLEPPVLMYVLTSISEGLTTLDTVVSSSCCTSLDYIVTYLF 945
YY L+ + + I L + ++ S+ G+T++ + V C +L +
Sbjct: 978 NQYYKLITFICEIFPEKIPQLPEDLFKSLMYSLELGMTSMSSEVCQLCLEALTPLAEQCA 1037
Query: 946 KHIAKEGKKPLRCREATQAGQRLLHFMQQNPDVL-QQMMSVLMNTIVFEDCRNQWSVSRP 1004
K A+E PL AT+ HF++ D+L Q + M T +
Sbjct: 1038 K--AQETDSPLFL--ATR------HFLKLVFDMLVLQKHNTEMTT----------AAGEA 1077
Query: 1005 LLGLILLNEKYFSELRASLINSQPLPK-QEVLAQCFRNL-MEGVEQNLSVKNRDRFTQNL 1062
L+ L++ +SEL +L++SQ P + LA F L L K + F ++L
Sbjct: 1078 FYTLVCLHQAEYSELVETLLSSQQDPVIYQRLADAFNKLTASSTPPTLDRKQKMAFLKSL 1137
Query: 1063 SVFRRDVAEAL 1073
F +V L
Sbjct: 1138 EEFMANVGGLL 1148
>gi|55770858 golgi SNAP receptor complex member 1 isoform 2 [Homo
sapiens]
Length = 248
Score = 33.1 bits (74), Expect = 1.5
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 856 DNHFDNVLQAFVKMLLSVSHSDLLQYRKLSQSYYPLLECLTQDHMSFIINLEPPVLMYVL 915
+N D L +F K+ S SHS R+ S PLL +QD M + +E L+ L
Sbjct: 20 ENELDLKLVSFSKLCTSYSHSSTRDGRRDSSDTTPLLNGSSQDRMFETMAIEIEQLLARL 79
Query: 916 TSISE 920
T +++
Sbjct: 80 TGVND 84
>gi|18201905 glucose phosphate isomerase [Homo sapiens]
Length = 558
Score = 32.3 bits (72), Expect = 2.5
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 682 DEDEFENFMLPLTVAFETVLQIFNNNFKQEDVKRMLIGLARDLRGIAFA 730
++D F +F L L +L ++ N EDV RML+ LA+ RG+ A
Sbjct: 33 NKDRFNHFSLTLNTNHGHILVDYSKNLVTEDVMRMLVDLAKS-RGVEAA 80
>gi|109452589 family with sequence similarity 98, member B isoform 2
[Homo sapiens]
Length = 330
Score = 31.6 bits (70), Expect = 4.3
Identities = 53/224 (23%), Positives = 97/224 (43%), Gaps = 40/224 (17%)
Query: 273 PLLSQLALSCLVQFASTRRSLFNSPERAK---YLGNLIKGVKRILEN--PQGLSDPGNYH 327
PLL + AL+ + +SPE ++ +LG+ IK + + E+ G D ++
Sbjct: 28 PLLEEQALTKAAEGG------LSSPEFSELCIWLGSQIKSLCNLEESITSAGRDDLESFQ 81
Query: 328 -EFCRFLARLKTNYQL---GELV-MVKEYPEVIRLIANFTITSLQHWEFAPNSVHYLLTL 382
E FL + Y + G++ +K+ + ++L+ F T LQ + N H L
Sbjct: 82 LEISGFLKEMACPYSVLISGDIKDRLKKKEDCLKLLL-FLSTELQASQILQNKKHKNSQL 140
Query: 383 ---------WQRMVASVPFVKSTE---PHLLDTYAPEITKAFITSRLDSVAIVVRDHLDD 430
Q M ++ KST PH+L+ ++ D ++ V ++H+
Sbjct: 141 DKNSEVYQEVQAMFDTLGIPKSTTSDIPHMLNQVESKVK--------DILSKVQKNHVGK 192
Query: 431 PL---DDTATVFQQLEQLCTVSRCEYEKTCALLVQLFDQNAQNY 471
PL D + +QLE++ CEYE +L++ D Q++
Sbjct: 193 PLLKMDLNSEQAEQLERINDALSCEYECRRRMLMKRLDVTVQSF 236
>gi|109452587 family with sequence similarity 98, member B isoform 1
[Homo sapiens]
Length = 433
Score = 31.6 bits (70), Expect = 4.3
Identities = 53/224 (23%), Positives = 97/224 (43%), Gaps = 40/224 (17%)
Query: 273 PLLSQLALSCLVQFASTRRSLFNSPERAK---YLGNLIKGVKRILEN--PQGLSDPGNYH 327
PLL + AL+ + +SPE ++ +LG+ IK + + E+ G D ++
Sbjct: 28 PLLEEQALTKAAEGG------LSSPEFSELCIWLGSQIKSLCNLEESITSAGRDDLESFQ 81
Query: 328 -EFCRFLARLKTNYQL---GELV-MVKEYPEVIRLIANFTITSLQHWEFAPNSVHYLLTL 382
E FL + Y + G++ +K+ + ++L+ F T LQ + N H L
Sbjct: 82 LEISGFLKEMACPYSVLISGDIKDRLKKKEDCLKLLL-FLSTELQASQILQNKKHKNSQL 140
Query: 383 ---------WQRMVASVPFVKSTE---PHLLDTYAPEITKAFITSRLDSVAIVVRDHLDD 430
Q M ++ KST PH+L+ ++ D ++ V ++H+
Sbjct: 141 DKNSEVYQEVQAMFDTLGIPKSTTSDIPHMLNQVESKVK--------DILSKVQKNHVGK 192
Query: 431 PL---DDTATVFQQLEQLCTVSRCEYEKTCALLVQLFDQNAQNY 471
PL D + +QLE++ CEYE +L++ D Q++
Sbjct: 193 PLLKMDLNSEQAEQLERINDALSCEYECRRRMLMKRLDVTVQSF 236
>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
Length = 1684
Score = 31.2 bits (69), Expect = 5.6
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 415 SRLDSVAIVVRDHLDDPLDDTATVFQQLEQLCTVSRCEYEKTCALLVQLFDQNAQNYQKL 474
+++ VA+ + LD +T TV ++LE L R E ++ A + L Q A++Y+ L
Sbjct: 968 NKIKLVAVKAKKELDSSRKETQTVKEELESL----RSEKDQLSASMRDLI-QGAESYKNL 1022
Query: 475 LHPYSGVTVDITIQEGR 491
L Y + + +++ R
Sbjct: 1023 LLEYEKQSEQLDVEKER 1039
>gi|120587023 down-regulated in metastasis [Homo sapiens]
Length = 2785
Score = 31.2 bits (69), Expect = 5.6
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 883 KLSQSYYPLLECLTQDHMSFIINLEPPVLMYVLTSISEGLTTLDTVVSSSCCTSLDYIVT 942
K S +Y PLL+ + Q ++ P + LT I+ L T DT + TSL Y+
Sbjct: 99 KNSFAYQPLLDLVVQLARDLQMDFYPHFPEFFLT-ITSILETQDTELLEWAFTSLSYLYK 157
Query: 943 YLFKHIAKE 951
YL++ + K+
Sbjct: 158 YLWRLMVKD 166
>gi|89036565 PREDICTED: similar to Temporarily Assigned Gene name
family member (tag-184) [Homo sapiens]
Length = 2785
Score = 31.2 bits (69), Expect = 5.6
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 883 KLSQSYYPLLECLTQDHMSFIINLEPPVLMYVLTSISEGLTTLDTVVSSSCCTSLDYIVT 942
K S +Y PLL+ + Q ++ P + LT I+ L T DT + TSL Y+
Sbjct: 99 KNSFAYQPLLDLVVQLARDLQMDFYPHFPEFFLT-ITSILETQDTELLEWAFTSLSYLYK 157
Query: 943 YLFKHIAKE 951
YL++ + K+
Sbjct: 158 YLWRLMVKD 166
>gi|54234040 vacuolar protein sorting 54 isoform 2 [Homo sapiens]
Length = 965
Score = 31.2 bits (69), Expect = 5.6
Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 1/133 (0%)
Query: 47 CQLLLEQGTTSYA-QLLAATCLSKLVSRVSPLPVEQRMDIRNYILNYVASQPKLAPFVIQ 105
CQ+L E+ S LL L+ L + + + I+ ++N V+ ++ V+
Sbjct: 362 CQVLEEERLISLVFGLLKQRKLNFLEIYGEKMVITAKNIIKQCVINKVSQTEEIDTDVVV 421
Query: 106 ALIQVIAKITKLGWFEVQKDQFVFREIIADVKKFLQGTVEHCIIGVIILSELTQEMNLVD 165
L + + WF++ KD F I K + ++ V+ ++ T+E+ +
Sbjct: 422 KLADQMRMLNFPQWFDLLKDIFSKFTIFLQRVKATLNIIHSVVLSVLDKNQRTRELEEIS 481
Query: 166 YSRPSAKHRKIAT 178
+ +AK + T
Sbjct: 482 QQKNAAKDNSLDT 494
>gi|54234034 vacuolar protein sorting 54 isoform 1 [Homo sapiens]
Length = 977
Score = 31.2 bits (69), Expect = 5.6
Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 1/133 (0%)
Query: 47 CQLLLEQGTTSYA-QLLAATCLSKLVSRVSPLPVEQRMDIRNYILNYVASQPKLAPFVIQ 105
CQ+L E+ S LL L+ L + + + I+ ++N V+ ++ V+
Sbjct: 374 CQVLEEERLISLVFGLLKQRKLNFLEIYGEKMVITAKNIIKQCVINKVSQTEEIDTDVVV 433
Query: 106 ALIQVIAKITKLGWFEVQKDQFVFREIIADVKKFLQGTVEHCIIGVIILSELTQEMNLVD 165
L + + WF++ KD F I K + ++ V+ ++ T+E+ +
Sbjct: 434 KLADQMRMLNFPQWFDLLKDIFSKFTIFLQRVKATLNIIHSVVLSVLDKNQRTRELEEIS 493
Query: 166 YSRPSAKHRKIAT 178
+ +AK + T
Sbjct: 494 QQKNAAKDNSLDT 506
>gi|13775238 plasmalemma vesicle associated protein [Homo sapiens]
Length = 442
Score = 30.4 bits (67), Expect = 9.5
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 14/113 (12%)
Query: 171 AKHRKIATSFRDTSLKDVLVLACSLLKEVFAKPLNLQDQCQQNLVMQVLKLVLNCLNFDF 230
AK + I T +++ L + V L++ V K LQ Q +Q Q+ K+ CL D
Sbjct: 173 AKEKTICTKDKESVLLNKRVAEEQLVECV--KTRELQHQERQLAKEQLQKVQALCLPLD- 229
Query: 231 IGSSADESADDLCTVQIPTTWRTIFLEPETLD-LFFNLYHSLPPLLSQLALSC 282
D + + WR + P +LD L +NLYH L L+ + +C
Sbjct: 230 ---------KDKFEMDLRNLWRDSII-PRSLDNLGYNLYHPLGSELASIRRAC 272
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.137 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,879,739
Number of Sequences: 37866
Number of extensions: 1501186
Number of successful extensions: 4835
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 4797
Number of HSP's gapped (non-prelim): 30
length of query: 1088
length of database: 18,247,518
effective HSP length: 113
effective length of query: 975
effective length of database: 13,968,660
effective search space: 13619443500
effective search space used: 13619443500
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.