Search of human proteins with 42542381

Search of human proteins with 42542381

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|42542381 solute carrier family 28, member 1 isoform 1 [Homo
sapiens]
         (649 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|42542381 solute carrier family 28, member 1 isoform 1 [Homo s...  1285   0.0  
gi|227116277 solute carrier family 28 (sodium-coupled nucleoside...   836   0.0  
gi|11545853 concentrative Na+-nucleoside cotransporter [Homo sap...   533   e-151
gi|42542383 solute carrier family 28, member 1 isoform 2 [Homo s...   314   2e-85
gi|4885057 apelin receptor [Homo sapiens]                              33   0.82 
gi|215272392 solute carrier family 18 (vesicular monoamine), mem...    32   1.4  
gi|215272390 solute carrier family 18 (vesicular monoamine), mem...    32   1.4  
gi|208879454 solute carrier family 18 (vesicular monoamine), mem...    32   1.4  
gi|4506987 solute carrier family 18 (vesicular monoamine), membe...    32   1.4  
gi|109633022 mucosal vascular addressin cell adhesion molecule 1...    30   6.9  
gi|18780285 mucosal vascular addressin cell adhesion molecule 1 ...    30   6.9  
gi|73747881 zinc finger, ZZ type with EF hand domain 1 [Homo sap...    30   6.9  
gi|15088795 phosphatidylinositol glycan anchor biosynthesis, cla...    30   9.1  

>gi|42542381 solute carrier family 28, member 1 isoform 1 [Homo
           sapiens]
          Length = 649

 Score = 1285 bits (3325), Expect = 0.0
 Identities = 649/649 (100%), Positives = 649/649 (100%)

Query: 1   MENDPSRRRESISLTPVAKGLENMGADFLESLEEGQLPRSDLSPAEIRSSWSEAAPKPFS 60
           MENDPSRRRESISLTPVAKGLENMGADFLESLEEGQLPRSDLSPAEIRSSWSEAAPKPFS
Sbjct: 1   MENDPSRRRESISLTPVAKGLENMGADFLESLEEGQLPRSDLSPAEIRSSWSEAAPKPFS 60

Query: 61  RWRNLQPALRARSFCREHMQLFRWIGTGLLCTGLSAFLLVACLLDFQRALALFVLTCVVL 120
           RWRNLQPALRARSFCREHMQLFRWIGTGLLCTGLSAFLLVACLLDFQRALALFVLTCVVL
Sbjct: 61  RWRNLQPALRARSFCREHMQLFRWIGTGLLCTGLSAFLLVACLLDFQRALALFVLTCVVL 120

Query: 121 TFLGHRLLKRLLGPKLRRFLKPQGHPRLLLWFKRGLALAAFLGLVLWLSLDTSQRPEQLV 180
           TFLGHRLLKRLLGPKLRRFLKPQGHPRLLLWFKRGLALAAFLGLVLWLSLDTSQRPEQLV
Sbjct: 121 TFLGHRLLKRLLGPKLRRFLKPQGHPRLLLWFKRGLALAAFLGLVLWLSLDTSQRPEQLV 180

Query: 181 SFAGICVFVALLFACSKHHCAVSWRAVSWGLGLQFVLGLLVIRTEPGFIAFEWLGEQIRI 240
           SFAGICVFVALLFACSKHHCAVSWRAVSWGLGLQFVLGLLVIRTEPGFIAFEWLGEQIRI
Sbjct: 181 SFAGICVFVALLFACSKHHCAVSWRAVSWGLGLQFVLGLLVIRTEPGFIAFEWLGEQIRI 240

Query: 241 FLSYTKAGSSFVFGEALVKDVFAFQVLPIIVFFSCVISVLYHVGLMQWVILKIAWLMQVT 300
           FLSYTKAGSSFVFGEALVKDVFAFQVLPIIVFFSCVISVLYHVGLMQWVILKIAWLMQVT
Sbjct: 241 FLSYTKAGSSFVFGEALVKDVFAFQVLPIIVFFSCVISVLYHVGLMQWVILKIAWLMQVT 300

Query: 301 MGTTATETLSVAGNIFVSQTEAPLLIRPYLADMTLSEVHVVMTGGYATIAGSLLGAYISF 360
           MGTTATETLSVAGNIFVSQTEAPLLIRPYLADMTLSEVHVVMTGGYATIAGSLLGAYISF
Sbjct: 301 MGTTATETLSVAGNIFVSQTEAPLLIRPYLADMTLSEVHVVMTGGYATIAGSLLGAYISF 360

Query: 361 GIDATSLIAASVMAAPCALALSKLVYPEVEESKFRREEGVKLTYGDAQNLIEAASTGAAI 420
           GIDATSLIAASVMAAPCALALSKLVYPEVEESKFRREEGVKLTYGDAQNLIEAASTGAAI
Sbjct: 361 GIDATSLIAASVMAAPCALALSKLVYPEVEESKFRREEGVKLTYGDAQNLIEAASTGAAI 420

Query: 421 SVKVVANIAANLIAFLAVLDFINAALSWLGDMVDIQGLSFQLICSYILRPVAFLMGVAWE 480
           SVKVVANIAANLIAFLAVLDFINAALSWLGDMVDIQGLSFQLICSYILRPVAFLMGVAWE
Sbjct: 421 SVKVVANIAANLIAFLAVLDFINAALSWLGDMVDIQGLSFQLICSYILRPVAFLMGVAWE 480

Query: 481 DCPVVAELLGIKLFLNEFVAYQDLSKYKQRRLAGAEEWVGDRKQWISVRAEVLTTFALCG 540
           DCPVVAELLGIKLFLNEFVAYQDLSKYKQRRLAGAEEWVGDRKQWISVRAEVLTTFALCG
Sbjct: 481 DCPVVAELLGIKLFLNEFVAYQDLSKYKQRRLAGAEEWVGDRKQWISVRAEVLTTFALCG 540

Query: 541 FANFSSIGIMLGGLTSMVPQRKSDFSQIVLRALFTGACVSLVNACMAGILYMPRGAEVDC 600
           FANFSSIGIMLGGLTSMVPQRKSDFSQIVLRALFTGACVSLVNACMAGILYMPRGAEVDC
Sbjct: 541 FANFSSIGIMLGGLTSMVPQRKSDFSQIVLRALFTGACVSLVNACMAGILYMPRGAEVDC 600

Query: 601 MSLLNTTLSSSSFEIYQCCREAFQSVNPEFSPEALDNCCRFYNHTICAQ 649
           MSLLNTTLSSSSFEIYQCCREAFQSVNPEFSPEALDNCCRFYNHTICAQ
Sbjct: 601 MSLLNTTLSSSSFEIYQCCREAFQSVNPEFSPEALDNCCRFYNHTICAQ 649


>gi|227116277 solute carrier family 28 (sodium-coupled nucleoside
           transporter), member 2 [Homo sapiens]
          Length = 658

 Score =  836 bits (2160), Expect = 0.0
 Identities = 414/655 (63%), Positives = 516/655 (78%), Gaps = 18/655 (2%)

Query: 9   RESISLTPVAKGLENMGADFLESLEEGQLPRSDLSPAEIRSSWSEAAPKPFSRWRNLQPA 68
           R+SI+L+ V  G  N G + +E  +E +   S  + A+  S      P  + R R+  P 
Sbjct: 7   RQSIALSTVETGTVNPGLELME--KEVEPEGSKRTDAQGHSLGDGLGPSTYQR-RSRWPF 63

Query: 69  LRARSFCREHMQLFRWIGTGLLCTGLSAFLLVACLLDFQRALALFVLTCVVLTFLGHRLL 128
            +ARSFC+ H  LF+ I  GLLC   +A+LL AC+L+FQRALALFV+TC+V+  L H  L
Sbjct: 64  SKARSFCKTHASLFKKILLGLLCLAYAAYLLAACILNFQRALALFVITCLVIFVLVHSFL 123

Query: 129 KRLLGPKLRRFLKPQGHPRLLLWFKRGLALAAFLGLVLWLSLDTSQRPEQLVSFAGICVF 188
           K+LLG KL R LKP  + RL LW K   A  + +GL+LWL+LDT+QRPEQL+ FAGIC+F
Sbjct: 124 KKLLGKKLTRCLKPFENSRLRLWTKWVFAGVSLVGLILWLALDTAQRPEQLIPFAGICMF 183

Query: 189 VALLFACSKHHCAVSWRAVSWGLGLQFVLGLLVIRTEPGFIAFEWLGEQIRIFLSYTKAG 248
           + +LFACSKHH AVSWR V  GLGLQFV G+LVIRT+ G+  F+WLGEQ++IFL+YT AG
Sbjct: 184 ILILFACSKHHSAVSWRTVFSGLGLQFVFGILVIRTDLGYTVFQWLGEQVQIFLNYTVAG 243

Query: 249 SSFVFGEALVKDVFAFQVLPIIVFFSCVISVLYHVGLMQWVILKIAWLMQVTMGTTATET 308
           SSFVFG+ LVKDVFAFQ LPII+FF CV+S+LY++GL+QWV+ K+AW +Q+TMGTTATET
Sbjct: 244 SSFVFGDTLVKDVFAFQALPIIIFFGCVVSILYYLGLVQWVVQKVAWFLQITMGTTATET 303

Query: 309 LSVAGNIFVSQTEAPLLIRPYLADMTLSEVHVVMTGGYATIAGSLLGAYISFGIDATSLI 368
           L+VAGNIFV  TEAPLLIRPYL DMTLSE+H VMTGG+ATI+G++LGA+I+FG+DA+SLI
Sbjct: 304 LAVAGNIFVGMTEAPLLIRPYLGDMTLSEIHAVMTGGFATISGTVLGAFIAFGVDASSLI 363

Query: 369 AASVMAAPCALALSKLVYPEVEESKFRREEGVKLTYGDAQNLIEAASTGAAISVKVVANI 428
           +ASVMAAPCALA SKL YPEVEESKF+ EEGVKL  G  +N++EAAS GA  ++ +  N+
Sbjct: 364 SASVMAAPCALASSKLAYPEVEESKFKSEEGVKLPRGKERNVLEAASNGAVDAIGLATNV 423

Query: 429 AANLIAFLAVLDFINAALSWLGDMVDIQGLSFQLICSYILRPVAFLMGVAWEDCPVVAEL 488
           AANLIAFLAVL FINAALSWLG++VDIQGL+FQ+ICSY+LRP+ F+MGV W DCP+VAE+
Sbjct: 424 AANLIAFLAVLAFINAALSWLGELVDIQGLTFQVICSYLLRPMVFMMGVEWTDCPMVAEM 483

Query: 489 LGIKLFLNEFVAYQDLSKYKQRRLAGAEEWVGDRKQWISVRAEVLTTFALCGFANFSSIG 548
           +GIK F+NEFVAYQ LS+YK +RL+G EEW+   KQWISVRAE++TTF+LCGFAN SSIG
Sbjct: 484 VGIKFFINEFVAYQQLSQYKNKRLSGMEEWIEGEKQWISVRAEIITTFSLCGFANLSSIG 543

Query: 549 IMLGGLTSMVPQRKSDFSQIVLRALFTGACVSLVNACMAGILYMPRGAEVDCMSLLNTTL 608
           I LGGLTS+VP RKSD S++V+RALFTGACVSL++ACMAGILY+PRGAE DC+S  NT+ 
Sbjct: 544 ITLGGLTSIVPHRKSDLSKVVVRALFTGACVSLISACMAGILYVPRGAEADCVSFPNTSF 603

Query: 609 SSSSFEIYQCCREAFQS-----VNP----------EFSPEALDNCCRFYNHTICA 648
           ++ ++E Y CCR  FQS      NP          EFS  AL NCC FYN+T+CA
Sbjct: 604 TNRTYETYMCCRGLFQSTSLNGTNPPSFSGPWEDKEFSAMALTNCCGFYNNTVCA 658


>gi|11545853 concentrative Na+-nucleoside cotransporter [Homo
           sapiens]
          Length = 691

 Score =  533 bits (1374), Expect = e-151
 Identities = 276/589 (46%), Positives = 388/589 (65%), Gaps = 22/589 (3%)

Query: 74  FCREHMQLFRWIGTGLLCTGLSAFLLVACLLDFQRALALFVLTCVVLTFLGHRLLKRLLG 133
           FCR+H    R I  G+L  G    ++ AC+L+F RAL LFV+T   + F+    L     
Sbjct: 93  FCRKHKTTLRHIIWGILLAGYLVMVISACVLNFHRALPLFVITVAAIFFVVWDHLMAKYE 152

Query: 134 PKLRRFLKPQGHPRLL----LWFKRGLALAAFLGLVLWLSLDTSQR-PEQLVSFAGICVF 188
            ++   L P    RLL     W K  +  +  L ++ WL+ DT++   +QLVSF G+ ++
Sbjct: 153 HRIDEMLSPGR--RLLNSHWFWLKWVIWSSLVLAVIFWLAFDTAKLGQQQLVSFGGLIMY 210

Query: 189 VALLFACSKHHCAVSWRAVSWGLGLQFVLGLLVIRTEPGFIAFEWLGEQIRIFLSYTKAG 248
           + LLF  SK+   V WR V WG+GLQF+LGLL++RT+PGFIAF+WLG Q++ FL YT AG
Sbjct: 211 IVLLFLFSKYPTRVYWRPVLWGIGLQFLLGLLILRTDPGFIAFDWLGRQVQTFLEYTDAG 270

Query: 249 SSFVFGEALVKDVFAFQVLPIIVFFSCVISVLYHVGLMQWVILKIAWLMQVTMGTTATET 308
           +SFVFGE      FAF+VLPI+VFFS V+S+LY++GLMQW+I K+ W+M VT G++  E+
Sbjct: 271 ASFVFGEKYKDHFFAFKVLPIVVFFSTVMSMLYYLGLMQWIIRKVGWIMLVTTGSSPIES 330

Query: 309 LSVAGNIFVSQTEAPLLIRPYLADMTLSEVHVVMTGGYATIAGSLLGAYISFGIDATSLI 368
           +  +GNIFV QTE+PLL+RPYL  +T SE+H +MT G++TIAGS+LGAYISFG+ ++ L+
Sbjct: 331 VVASGNIFVGQTESPLLVRPYLPYITKSELHAIMTAGFSTIAGSVLGAYISFGVPSSHLL 390

Query: 369 AASVMAAPCALALSKLVYPEVEESKFRREEGVKLTYGDAQNLIEAASTGAAISVKVVANI 428
            ASVM+AP +LA +KL +PE E+ K   +  +K+  GD+ NL+EAA+ GA+ S+ +VANI
Sbjct: 391 TASVMSAPASLAAAKLFWPETEKPKITLKNAMKMESGDSGNLLEAATQGASSSISLVANI 450

Query: 429 AANLIAFLAVLDFINAALSWLGDMVDIQGLSFQLICSYILRPVAFLMGVAWEDCPVVAEL 488
           A NLIAFLA+L F+N+ALSW G+M D   LSF+LICSYI  P +F+MGV W+D  +VA L
Sbjct: 451 AVNLIAFLALLSFMNSALSWFGNMFDYPQLSFELICSYIFMPFSFMMGVEWQDSFMVARL 510

Query: 489 LGIKLFLNEFVAYQDLSKYKQRRLAGAEEWVGDRKQWISVRAEVLTTFALCGFANFSSIG 548
           +G K F NEFVAY+ LSK+   R  G  ++V   +Q+IS+R+E++ T+ALCGFAN  S+G
Sbjct: 511 IGYKTFFNEFVAYEHLSKWIHLRKEGGPKFVNGVQQYISIRSEIIATYALCGFANIGSLG 570

Query: 549 IMLGGLTSMVPQRKSDFSQIVLRALFTGACVSLVNACMAGILYMPRGAEVDCMSLL---- 604
           I++GGLTSM P RK D +   +RAL  G     + AC+AGIL      +++C  +L    
Sbjct: 571 IVIGGLTSMAPSRKRDIASGAVRALIAGTVACFMTACIAGIL-SSTPVDINCHHVLENAF 629

Query: 605 NTTLSSSSFEIYQCCREAFQSV----------NPEFSPEALDNCCRFYN 643
           N+T   ++ ++  CC+    S               S  +L  CC   N
Sbjct: 630 NSTFPGNTTKVIACCQSLLSSTVAKGPGEVIPGGNHSLYSLKGCCTLLN 678


>gi|42542383 solute carrier family 28, member 1 isoform 2 [Homo
           sapiens]
          Length = 175

 Score =  314 bits (804), Expect = 2e-85
 Identities = 154/154 (100%), Positives = 154/154 (100%)

Query: 1   MENDPSRRRESISLTPVAKGLENMGADFLESLEEGQLPRSDLSPAEIRSSWSEAAPKPFS 60
           MENDPSRRRESISLTPVAKGLENMGADFLESLEEGQLPRSDLSPAEIRSSWSEAAPKPFS
Sbjct: 1   MENDPSRRRESISLTPVAKGLENMGADFLESLEEGQLPRSDLSPAEIRSSWSEAAPKPFS 60

Query: 61  RWRNLQPALRARSFCREHMQLFRWIGTGLLCTGLSAFLLVACLLDFQRALALFVLTCVVL 120
           RWRNLQPALRARSFCREHMQLFRWIGTGLLCTGLSAFLLVACLLDFQRALALFVLTCVVL
Sbjct: 61  RWRNLQPALRARSFCREHMQLFRWIGTGLLCTGLSAFLLVACLLDFQRALALFVLTCVVL 120

Query: 121 TFLGHRLLKRLLGPKLRRFLKPQGHPRLLLWFKR 154
           TFLGHRLLKRLLGPKLRRFLKPQGHPRLLLWFKR
Sbjct: 121 TFLGHRLLKRLLGPKLRRFLKPQGHPRLLLWFKR 154


>gi|4885057 apelin receptor [Homo sapiens]
          Length = 380

 Score = 33.1 bits (74), Expect = 0.82
 Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 13/111 (11%)

Query: 498 FVAYQDLSKYKQRRLAGAEEWVGDRKQWISVRAEVLTTFALCGFA-NFSSIGIMLGGLTS 556
           F+A      +++ R+ G  +    R++ +S+   ++ TFALC    +      MLG L  
Sbjct: 223 FIAQTIAGHFRKERIEGLRK----RRRLLSIIVVLVVTFALCWMPYHLVKTLYMLGSLLH 278

Query: 557 MVPQRKSDFSQIVLRALFTGACVSLVNACMAGILYM---PRGAEVDCMSLL 604
                  DF   ++       C+S VN+C+   LY    PR  +  C S+L
Sbjct: 279 W----PCDFDLFLMNIFPYCTCISYVNSCLNPFLYAFFDPRFRQA-CTSML 324


>gi|215272392 solute carrier family 18 (vesicular monoamine), member
           1 isoform c [Homo sapiens]
          Length = 472

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 9/140 (6%)

Query: 307 ETLSVAGNIFVSQTEAPLLIRPYLADMT-LSEVHVVMTGGY-----ATIAGSLLGAYISF 360
           E ++  G +F S+    LL+ P++  +T     H+ M  G+     +T+  +  G Y   
Sbjct: 134 EEITRVGVLFASKAVMQLLVNPFVGPLTNRIGYHIPMFAGFVIMFLSTVMFAFSGTYTLL 193

Query: 361 GIDATSLIAASVMAAPCALALSKLVYPEVEESKFRREEGVKLTYGDAQNLIEAASTGAAI 420
            +  T     S  ++   L +   VY +  E    R  G  L  G A  L+  A  G+ +
Sbjct: 194 FVARTLQGIGSSFSSVAGLGMLASVYTDDHER--GRAMGTALG-GLALGLLVGAPFGSVM 250

Query: 421 SVKVVANIAANLIAFLAVLD 440
              V  +    ++AFLA+LD
Sbjct: 251 YEFVGKSAPFLILAFLALLD 270


>gi|215272390 solute carrier family 18 (vesicular monoamine), member
           1 isoform b [Homo sapiens]
          Length = 493

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 9/140 (6%)

Query: 307 ETLSVAGNIFVSQTEAPLLIRPYLADMT-LSEVHVVMTGGY-----ATIAGSLLGAYISF 360
           E ++  G +F S+    LL+ P++  +T     H+ M  G+     +T+  +  G Y   
Sbjct: 134 EEITRVGVLFASKAVMQLLVNPFVGPLTNRIGYHIPMFAGFVIMFLSTVMFAFSGTYTLL 193

Query: 361 GIDATSLIAASVMAAPCALALSKLVYPEVEESKFRREEGVKLTYGDAQNLIEAASTGAAI 420
            +  T     S  ++   L +   VY +  E    R  G  L  G A  L+  A  G+ +
Sbjct: 194 FVARTLQGIGSSFSSVAGLGMLASVYTDDHER--GRAMGTALG-GLALGLLVGAPFGSVM 250

Query: 421 SVKVVANIAANLIAFLAVLD 440
              V  +    ++AFLA+LD
Sbjct: 251 YEFVGKSAPFLILAFLALLD 270


>gi|208879454 solute carrier family 18 (vesicular monoamine), member
           1 isoform a [Homo sapiens]
          Length = 525

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 9/140 (6%)

Query: 307 ETLSVAGNIFVSQTEAPLLIRPYLADMT-LSEVHVVMTGGY-----ATIAGSLLGAYISF 360
           E ++  G +F S+    LL+ P++  +T     H+ M  G+     +T+  +  G Y   
Sbjct: 134 EEITRVGVLFASKAVMQLLVNPFVGPLTNRIGYHIPMFAGFVIMFLSTVMFAFSGTYTLL 193

Query: 361 GIDATSLIAASVMAAPCALALSKLVYPEVEESKFRREEGVKLTYGDAQNLIEAASTGAAI 420
            +  T     S  ++   L +   VY +  E    R  G  L  G A  L+  A  G+ +
Sbjct: 194 FVARTLQGIGSSFSSVAGLGMLASVYTDDHER--GRAMGTALG-GLALGLLVGAPFGSVM 250

Query: 421 SVKVVANIAANLIAFLAVLD 440
              V  +    ++AFLA+LD
Sbjct: 251 YEFVGKSAPFLILAFLALLD 270


>gi|4506987 solute carrier family 18 (vesicular monoamine), member 1
           isoform a [Homo sapiens]
          Length = 525

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 9/140 (6%)

Query: 307 ETLSVAGNIFVSQTEAPLLIRPYLADMT-LSEVHVVMTGGY-----ATIAGSLLGAYISF 360
           E ++  G +F S+    LL+ P++  +T     H+ M  G+     +T+  +  G Y   
Sbjct: 134 EEITRVGVLFASKAVMQLLVNPFVGPLTNRIGYHIPMFAGFVIMFLSTVMFAFSGTYTLL 193

Query: 361 GIDATSLIAASVMAAPCALALSKLVYPEVEESKFRREEGVKLTYGDAQNLIEAASTGAAI 420
            +  T     S  ++   L +   VY +  E    R  G  L  G A  L+  A  G+ +
Sbjct: 194 FVARTLQGIGSSFSSVAGLGMLASVYTDDHER--GRAMGTALG-GLALGLLVGAPFGSVM 250

Query: 421 SVKVVANIAANLIAFLAVLD 440
              V  +    ++AFLA+LD
Sbjct: 251 YEFVGKSAPFLILAFLALLD 270


>gi|109633022 mucosal vascular addressin cell adhesion molecule 1
           isoform a precursor [Homo sapiens]
          Length = 382

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)

Query: 152 FKRGLALAAFLGLVLWLSLDTS----QRPEQLVSFA-GICVFVALLFACSKHHCAVSWRA 206
           F   L LA  LGL+L  SL       + PE +V+ A G    +    AC+    +V WR 
Sbjct: 3   FGLALLLAGLLGLLLGQSLQVKPLQVEPPEPVVAVALGASRQLTCRLACADRGASVQWRG 62

Query: 207 VSWGLG 212
           +   LG
Sbjct: 63  LDTSLG 68


>gi|18780285 mucosal vascular addressin cell adhesion molecule 1
           isoform b precursor [Homo sapiens]
          Length = 295

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)

Query: 152 FKRGLALAAFLGLVLWLSLDTS----QRPEQLVSFA-GICVFVALLFACSKHHCAVSWRA 206
           F   L LA  LGL+L  SL       + PE +V+ A G    +    AC+    +V WR 
Sbjct: 3   FGLALLLAGLLGLLLGQSLQVKPLQVEPPEPVVAVALGASRQLTCRLACADRGASVQWRG 62

Query: 207 VSWGLG 212
           +   LG
Sbjct: 63  LDTSLG 68


>gi|73747881 zinc finger, ZZ type with EF hand domain 1 [Homo sapiens]
          Length = 2961

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 1/69 (1%)

Query: 200  CAVSWRAVSWGLGLQFVLGLLVIRTEPGFIAFEWLGEQIRIFLSYTKAGSSFVFGEALVK 259
            C +   AVSWGL LQ ++  L+ R     +A + +  Q+   +   +A  + V    L K
Sbjct: 1193 CGLPDVAVSWGLDLQLLVSRLMGRLASQCMALKSV-RQLGSNMVVPQAKMALVLSSPLWK 1251

Query: 260  DVFAFQVLP 268
             VF  QV P
Sbjct: 1252 PVFRHQVCP 1260


>gi|15088795 phosphatidylinositol glycan anchor biosynthesis, class
           S [Homo sapiens]
          Length = 555

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 2/85 (2%)

Query: 275 CVISVLYHVGLMQWVILKIAWLMQVTMGTTATETLSVAGNIFVSQTEAPLLIRPYLADMT 334
           C++S     GLM W + ++ W   V    TAT TL+    +    +   ++I+  +A   
Sbjct: 408 CLLSGPTSEGLMTWELDRLLWARSVENLATATTTLTSLAQLLGKISN--IVIKDDVASEV 465

Query: 335 LSEVHVVMTGGYATIAGSLLGAYIS 359
              V  V        +G L  A+++
Sbjct: 466 YKAVAAVQKSAEELASGHLASAFVA 490


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.327    0.139    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,509,274
Number of Sequences: 37866
Number of extensions: 926807
Number of successful extensions: 2614
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2606
Number of HSP's gapped (non-prelim): 13
length of query: 649
length of database: 18,247,518
effective HSP length: 109
effective length of query: 540
effective length of database: 14,120,124
effective search space: 7624866960
effective search space used: 7624866960
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.