Guide to the Human Genome
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Search of human proteins with 41406069

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|41406069 H2A histone family, member V isoform 4 [Homo
sapiens]
         (66 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|41406069 H2A histone family, member V isoform 4 [Homo sapiens]     130   2e-31
gi|6912616 H2A histone family, member V isoform 1 [Homo sapiens]      130   2e-31
gi|20357599 H2A histone family, member V isoform 2 [Homo sapiens]     130   2e-31
gi|4504255 H2A histone family, member Z [Homo sapiens]                127   2e-30
gi|41406067 H2A histone family, member V isoform 3 [Homo sapiens]      80   3e-16
gi|15617199 histone cluster 3, H2a [Homo sapiens]                      77   4e-15
gi|106775678 histone cluster 2, H2aa4 [Homo sapiens]                   76   7e-15
gi|24638446 histone cluster 2, H2ac [Homo sapiens]                     76   7e-15
gi|4504251 histone cluster 2, H2aa3 [Homo sapiens]                     76   7e-15
gi|4504245 histone cluster 1, H2ac [Homo sapiens]                      75   9e-15
gi|28195394 histone cluster 2, H2ab [Homo sapiens]                     75   9e-15
gi|19557656 histone cluster 1, H2ab [Homo sapiens]                     75   9e-15
gi|10645195 histone cluster 1, H2ae [Homo sapiens]                     75   9e-15
gi|10800130 histone cluster 1, H2ad [Homo sapiens]                     75   9e-15
gi|4504253 H2A histone family, member X [Homo sapiens]                 74   2e-14
gi|10800132 histone cluster 1, H2ag [Homo sapiens]                     74   2e-14
gi|4504239 histone cluster 1, H2ai [Homo sapiens]                      74   2e-14
gi|18105045 histone cluster 1, H2ah [Homo sapiens]                     74   2e-14
gi|4504241 histone cluster 1, H2ak [Homo sapiens]                      74   2e-14
gi|25092737 histone cluster 1, H2aa [Homo sapiens]                     74   2e-14
gi|4504249 histone cluster 1, H2am [Homo sapiens]                      74   2e-14
gi|4504243 histone cluster 1, H2al [Homo sapiens]                      74   2e-14
gi|10800144 histone cluster 1, H2aj [Homo sapiens]                     74   2e-14
gi|29553970 H2A histone family, member J [Homo sapiens]                74   2e-14
gi|8923920 H2A histone family, member Y2 [Homo sapiens]                57   2e-09
gi|4758496 H2A histone family, member Y isoform 2 [Homo sapiens]       56   7e-09
gi|93141020 H2A histone family, member Y isoform 2 [Homo sapiens]      56   7e-09
gi|93141018 H2A histone family, member Y isoform 3 [Homo sapiens]      56   7e-09
gi|20336746 H2A histone family, member Y isoform 1 [Homo sapiens]      56   7e-09
gi|41406071 H2A histone family, member V isoform 5 [Homo sapiens]      55   2e-08

>gi|41406069 H2A histone family, member V isoform 4 [Homo sapiens]
          Length = 66

 Score =  130 bits (327), Expect = 2e-31
 Identities = 66/66 (100%), Positives = 66/66 (100%)

Query: 1  MAGGKAGKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILE 60
          MAGGKAGKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILE
Sbjct: 1  MAGGKAGKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILE 60

Query: 61 YLTAEV 66
          YLTAEV
Sbjct: 61 YLTAEV 66


>gi|6912616 H2A histone family, member V isoform 1 [Homo sapiens]
          Length = 128

 Score =  130 bits (327), Expect = 2e-31
 Identities = 66/66 (100%), Positives = 66/66 (100%)

Query: 1  MAGGKAGKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILE 60
          MAGGKAGKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILE
Sbjct: 1  MAGGKAGKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILE 60

Query: 61 YLTAEV 66
          YLTAEV
Sbjct: 61 YLTAEV 66


>gi|20357599 H2A histone family, member V isoform 2 [Homo sapiens]
          Length = 114

 Score =  130 bits (327), Expect = 2e-31
 Identities = 66/66 (100%), Positives = 66/66 (100%)

Query: 1  MAGGKAGKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILE 60
          MAGGKAGKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILE
Sbjct: 1  MAGGKAGKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILE 60

Query: 61 YLTAEV 66
          YLTAEV
Sbjct: 61 YLTAEV 66


>gi|4504255 H2A histone family, member Z [Homo sapiens]
          Length = 128

 Score =  127 bits (319), Expect = 2e-30
 Identities = 64/66 (96%), Positives = 65/66 (98%)

Query: 1  MAGGKAGKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILE 60
          MAGGKAGKDSGKAK KAVSRSQRAGLQFPVGRIHRHLK+RTTSHGRVGATAAVYSAAILE
Sbjct: 1  MAGGKAGKDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILE 60

Query: 61 YLTAEV 66
          YLTAEV
Sbjct: 61 YLTAEV 66


>gi|41406067 H2A histone family, member V isoform 3 [Homo sapiens]
          Length = 102

 Score = 80.5 bits (197), Expect = 3e-16
 Identities = 39/39 (100%), Positives = 39/39 (100%)

Query: 28 FPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66
          FPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV
Sbjct: 2  FPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 40


>gi|15617199 histone cluster 3, H2a [Homo sapiens]
          Length = 130

 Score = 76.6 bits (187), Expect = 4e-15
 Identities = 41/60 (68%), Positives = 46/60 (76%), Gaps = 1/60 (1%)

Query: 7  GKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66
          GK  GKA+AKA SRS RAGLQFPVGR+HR L+    S  RVGA A VY AA+LEYLTAE+
Sbjct: 5  GKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSE-RVGAGAPVYLAAVLEYLTAEI 63


>gi|106775678 histone cluster 2, H2aa4 [Homo sapiens]
          Length = 130

 Score = 75.9 bits (185), Expect = 7e-15
 Identities = 40/60 (66%), Positives = 46/60 (76%), Gaps = 1/60 (1%)

Query: 7  GKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66
          GK  GKA+AKA SRS RAGLQFPVGR+HR L+    +  RVGA A VY AA+LEYLTAE+
Sbjct: 5  GKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYMAAVLEYLTAEI 63


>gi|24638446 histone cluster 2, H2ac [Homo sapiens]
          Length = 129

 Score = 75.9 bits (185), Expect = 7e-15
 Identities = 40/60 (66%), Positives = 46/60 (76%), Gaps = 1/60 (1%)

Query: 7  GKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66
          GK  GKA+AKA SRS RAGLQFPVGR+HR L+    +  RVGA A VY AA+LEYLTAE+
Sbjct: 5  GKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYMAAVLEYLTAEI 63


>gi|4504251 histone cluster 2, H2aa3 [Homo sapiens]
          Length = 130

 Score = 75.9 bits (185), Expect = 7e-15
 Identities = 40/60 (66%), Positives = 46/60 (76%), Gaps = 1/60 (1%)

Query: 7  GKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66
          GK  GKA+AKA SRS RAGLQFPVGR+HR L+    +  RVGA A VY AA+LEYLTAE+
Sbjct: 5  GKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYMAAVLEYLTAEI 63


>gi|4504245 histone cluster 1, H2ac [Homo sapiens]
          Length = 130

 Score = 75.5 bits (184), Expect = 9e-15
 Identities = 40/60 (66%), Positives = 46/60 (76%), Gaps = 1/60 (1%)

Query: 7  GKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66
          GK  GKA+AKA SRS RAGLQFPVGR+HR L+    +  RVGA A VY AA+LEYLTAE+
Sbjct: 5  GKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYLAAVLEYLTAEI 63


>gi|28195394 histone cluster 2, H2ab [Homo sapiens]
          Length = 130

 Score = 75.5 bits (184), Expect = 9e-15
 Identities = 40/60 (66%), Positives = 46/60 (76%), Gaps = 1/60 (1%)

Query: 7  GKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66
          GK  GKA+AKA SRS RAGLQFPVGR+HR L+    +  RVGA A VY AA+LEYLTAE+
Sbjct: 5  GKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYLAAVLEYLTAEI 63


>gi|19557656 histone cluster 1, H2ab [Homo sapiens]
          Length = 130

 Score = 75.5 bits (184), Expect = 9e-15
 Identities = 40/60 (66%), Positives = 46/60 (76%), Gaps = 1/60 (1%)

Query: 7  GKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66
          GK  GKA+AKA +RS RAGLQFPVGR+HR L+    S  RVGA A VY AA+LEYLTAE+
Sbjct: 5  GKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSE-RVGAGAPVYLAAVLEYLTAEI 63


>gi|10645195 histone cluster 1, H2ae [Homo sapiens]
          Length = 130

 Score = 75.5 bits (184), Expect = 9e-15
 Identities = 40/60 (66%), Positives = 46/60 (76%), Gaps = 1/60 (1%)

Query: 7  GKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66
          GK  GKA+AKA +RS RAGLQFPVGR+HR L+    S  RVGA A VY AA+LEYLTAE+
Sbjct: 5  GKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSE-RVGAGAPVYLAAVLEYLTAEI 63


>gi|10800130 histone cluster 1, H2ad [Homo sapiens]
          Length = 130

 Score = 75.5 bits (184), Expect = 9e-15
 Identities = 40/60 (66%), Positives = 46/60 (76%), Gaps = 1/60 (1%)

Query: 7  GKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66
          GK  GKA+AKA +RS RAGLQFPVGR+HR L+    S  RVGA A VY AA+LEYLTAE+
Sbjct: 5  GKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSE-RVGAGAPVYLAAVLEYLTAEI 63


>gi|4504253 H2A histone family, member X [Homo sapiens]
          Length = 143

 Score = 74.3 bits (181), Expect = 2e-14
 Identities = 40/60 (66%), Positives = 46/60 (76%), Gaps = 1/60 (1%)

Query: 7  GKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66
          GK  GKA+AKA SRS RAGLQFPVGR+HR L+    +  RVGA A VY AA+LEYLTAE+
Sbjct: 5  GKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAE-RVGAGAPVYLAAVLEYLTAEI 63


>gi|10800132 histone cluster 1, H2ag [Homo sapiens]
          Length = 130

 Score = 74.3 bits (181), Expect = 2e-14
 Identities = 39/60 (65%), Positives = 46/60 (76%), Gaps = 1/60 (1%)

Query: 7  GKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66
          GK  GKA+AKA +RS RAGLQFPVGR+HR L+    +  RVGA A VY AA+LEYLTAE+
Sbjct: 5  GKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYLAAVLEYLTAEI 63


>gi|4504239 histone cluster 1, H2ai [Homo sapiens]
          Length = 130

 Score = 74.3 bits (181), Expect = 2e-14
 Identities = 39/60 (65%), Positives = 46/60 (76%), Gaps = 1/60 (1%)

Query: 7  GKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66
          GK  GKA+AKA +RS RAGLQFPVGR+HR L+    +  RVGA A VY AA+LEYLTAE+
Sbjct: 5  GKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYLAAVLEYLTAEI 63


>gi|18105045 histone cluster 1, H2ah [Homo sapiens]
          Length = 128

 Score = 74.3 bits (181), Expect = 2e-14
 Identities = 39/60 (65%), Positives = 46/60 (76%), Gaps = 1/60 (1%)

Query: 7  GKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66
          GK  GKA+AKA +RS RAGLQFPVGR+HR L+    +  RVGA A VY AA+LEYLTAE+
Sbjct: 5  GKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYLAAVLEYLTAEI 63


>gi|4504241 histone cluster 1, H2ak [Homo sapiens]
          Length = 130

 Score = 74.3 bits (181), Expect = 2e-14
 Identities = 39/60 (65%), Positives = 46/60 (76%), Gaps = 1/60 (1%)

Query: 7  GKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66
          GK  GKA+AKA +RS RAGLQFPVGR+HR L+    +  RVGA A VY AA+LEYLTAE+
Sbjct: 5  GKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYLAAVLEYLTAEI 63


>gi|25092737 histone cluster 1, H2aa [Homo sapiens]
          Length = 131

 Score = 74.3 bits (181), Expect = 2e-14
 Identities = 39/60 (65%), Positives = 46/60 (76%), Gaps = 1/60 (1%)

Query: 7  GKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66
          GK  GKA+AK+ SRS RAGLQFPVGRIHR L+    +  R+GA A VY AA+LEYLTAE+
Sbjct: 5  GKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAE-RIGAGAPVYLAAVLEYLTAEI 63


>gi|4504249 histone cluster 1, H2am [Homo sapiens]
          Length = 130

 Score = 74.3 bits (181), Expect = 2e-14
 Identities = 39/60 (65%), Positives = 46/60 (76%), Gaps = 1/60 (1%)

Query: 7  GKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66
          GK  GKA+AKA +RS RAGLQFPVGR+HR L+    +  RVGA A VY AA+LEYLTAE+
Sbjct: 5  GKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYLAAVLEYLTAEI 63


>gi|4504243 histone cluster 1, H2al [Homo sapiens]
          Length = 130

 Score = 74.3 bits (181), Expect = 2e-14
 Identities = 39/60 (65%), Positives = 46/60 (76%), Gaps = 1/60 (1%)

Query: 7  GKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66
          GK  GKA+AKA +RS RAGLQFPVGR+HR L+    +  RVGA A VY AA+LEYLTAE+
Sbjct: 5  GKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYLAAVLEYLTAEI 63


>gi|10800144 histone cluster 1, H2aj [Homo sapiens]
          Length = 128

 Score = 74.3 bits (181), Expect = 2e-14
 Identities = 39/60 (65%), Positives = 46/60 (76%), Gaps = 1/60 (1%)

Query: 7  GKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66
          GK  GKA+AKA +RS RAGLQFPVGR+HR L+    +  RVGA A VY AA+LEYLTAE+
Sbjct: 5  GKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYLAAVLEYLTAEI 63


>gi|29553970 H2A histone family, member J [Homo sapiens]
          Length = 129

 Score = 73.9 bits (180), Expect = 2e-14
 Identities = 39/60 (65%), Positives = 45/60 (75%), Gaps = 1/60 (1%)

Query: 7  GKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66
          GK  GK +AKA SRS RAGLQFPVGR+HR L+    +  RVGA A VY AA+LEYLTAE+
Sbjct: 5  GKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYLAAVLEYLTAEI 63


>gi|8923920 H2A histone family, member Y2 [Homo sapiens]
          Length = 372

 Score = 57.4 bits (137), Expect = 2e-09
 Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 1/57 (1%)

Query: 10 SGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66
          SGK K   +SRS RAG+ FPVGR+ R+LK  T  + R+   A VY AA++EYL AE+
Sbjct: 5  SGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKY-RISVGAPVYMAAVIEYLAAEI 60


>gi|4758496 H2A histone family, member Y isoform 2 [Homo sapiens]
          Length = 371

 Score = 55.8 bits (133), Expect = 7e-09
 Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 1/56 (1%)

Query: 11 GKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66
          GK K+   SRS +AG+ FPVGR+ R++K     + R+G  A VY AA+LEYLTAE+
Sbjct: 6  GKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKY-RIGVGAPVYMAAVLEYLTAEI 60


>gi|93141020 H2A histone family, member Y isoform 2 [Homo sapiens]
          Length = 371

 Score = 55.8 bits (133), Expect = 7e-09
 Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 1/56 (1%)

Query: 11 GKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66
          GK K+   SRS +AG+ FPVGR+ R++K     + R+G  A VY AA+LEYLTAE+
Sbjct: 6  GKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKY-RIGVGAPVYMAAVLEYLTAEI 60


>gi|93141018 H2A histone family, member Y isoform 3 [Homo sapiens]
          Length = 372

 Score = 55.8 bits (133), Expect = 7e-09
 Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 1/56 (1%)

Query: 11 GKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66
          GK K+   SRS +AG+ FPVGR+ R++K     + R+G  A VY AA+LEYLTAE+
Sbjct: 6  GKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKY-RIGVGAPVYMAAVLEYLTAEI 60


>gi|20336746 H2A histone family, member Y isoform 1 [Homo sapiens]
          Length = 369

 Score = 55.8 bits (133), Expect = 7e-09
 Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 1/56 (1%)

Query: 11 GKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66
          GK K+   SRS +AG+ FPVGR+ R++K     + R+G  A VY AA+LEYLTAE+
Sbjct: 6  GKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKY-RIGVGAPVYMAAVLEYLTAEI 60


>gi|41406071 H2A histone family, member V isoform 5 [Homo sapiens]
          Length = 90

 Score = 54.7 bits (130), Expect = 2e-08
 Identities = 27/27 (100%), Positives = 27/27 (100%)

Query: 1  MAGGKAGKDSGKAKAKAVSRSQRAGLQ 27
          MAGGKAGKDSGKAKAKAVSRSQRAGLQ
Sbjct: 1  MAGGKAGKDSGKAKAKAVSRSQRAGLQ 27


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.127    0.347 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,037,804
Number of Sequences: 37866
Number of extensions: 58024
Number of successful extensions: 209
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 151
Number of HSP's gapped (non-prelim): 38
length of query: 66
length of database: 18,247,518
effective HSP length: 39
effective length of query: 27
effective length of database: 16,770,744
effective search space: 452810088
effective search space used: 452810088
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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