Search of human proteins with 40789249

Search of human proteins with 40789249

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|40789249 aspartyl-tRNA synthetase 2, mitochondrial [Homo
sapiens]
         (645 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|40789249 aspartyl-tRNA synthetase 2, mitochondrial [Homo sapi...  1302   0.0  
gi|45439306 aspartyl-tRNA synthetase [Homo sapiens]                    77   6e-14
gi|194272210 lysyl-tRNA synthetase isoform 1 [Homo sapiens]            75   2e-13
gi|5031815 lysyl-tRNA synthetase isoform 2 [Homo sapiens]              75   2e-13
gi|4758762 asparaginyl-tRNA synthetase [Homo sapiens]                  57   4e-08
gi|226491502 asparaginyl-tRNA synthetase 2, mitochondrial [Homo ...    42   0.002
gi|80861486 granule cell antiserum positive 14 [Homo sapiens]          33   0.81 
gi|4502171 adenine phosphoribosyltransferase isoform a [Homo sap...    31   4.0  
gi|4502523 calcium channel, voltage-dependent, N type, alpha 1B ...    30   5.3  
gi|7656967 cadherin EGF LAG seven-pass G-type receptor 1 [Homo s...    30   6.9  
gi|28827782 zinc fingers and homeoboxes 3 [Homo sapiens]               30   6.9  
gi|158631177 homeodomain leucine zipper protein [Homo sapiens]         30   6.9  
gi|17149834 sortilin 1 preproprotein [Homo sapiens]                    30   9.0  
gi|4759162 SRY-box 14 [Homo sapiens]                                   30   9.0  

>gi|40789249 aspartyl-tRNA synthetase 2, mitochondrial [Homo
           sapiens]
          Length = 645

 Score = 1302 bits (3370), Expect = 0.0
 Identities = 645/645 (100%), Positives = 645/645 (100%)

Query: 1   MYFPSWLSQLYRGLSRPIRRTTQPIWGSLYRSLLQSSQRRIPEFSSFVVRTNTCGELRSS 60
           MYFPSWLSQLYRGLSRPIRRTTQPIWGSLYRSLLQSSQRRIPEFSSFVVRTNTCGELRSS
Sbjct: 1   MYFPSWLSQLYRGLSRPIRRTTQPIWGSLYRSLLQSSQRRIPEFSSFVVRTNTCGELRSS 60

Query: 61  HLGQEVTLCGWIQYRRQNTFLVLRDFDGLVQVIIPQDESAASVKKILCEAPVESVVQVSG 120
           HLGQEVTLCGWIQYRRQNTFLVLRDFDGLVQVIIPQDESAASVKKILCEAPVESVVQVSG
Sbjct: 61  HLGQEVTLCGWIQYRRQNTFLVLRDFDGLVQVIIPQDESAASVKKILCEAPVESVVQVSG 120

Query: 121 TVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKNFVKKTEALRLQYRYLDLRS 180
           TVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKNFVKKTEALRLQYRYLDLRS
Sbjct: 121 TVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKNFVKKTEALRLQYRYLDLRS 180

Query: 181 FQMQYNLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGAKEFLVPSREPGKFYSLP 240
           FQMQYNLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGAKEFLVPSREPGKFYSLP
Sbjct: 181 FQMQYNLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGAKEFLVPSREPGKFYSLP 240

Query: 241 QSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQTGIQSLIEGL 300
           QSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQTGIQSLIEGL
Sbjct: 241 QSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQTGIQSLIEGL 300

Query: 301 LQYSWPNDKDPVVVPFPTMTFAEVLATYGTDKPDTRFGMKIIDISDVFRNTEIGFLQDAL 360
           LQYSWPNDKDPVVVPFPTMTFAEVLATYGTDKPDTRFGMKIIDISDVFRNTEIGFLQDAL
Sbjct: 301 LQYSWPNDKDPVVVPFPTMTFAEVLATYGTDKPDTRFGMKIIDISDVFRNTEIGFLQDAL 360

Query: 361 SKPHGTVKAICIPEGAKYLKRKDIESIRNFAADHFNQEILPVFLNANRNWNSPVANFIME 420
           SKPHGTVKAICIPEGAKYLKRKDIESIRNFAADHFNQEILPVFLNANRNWNSPVANFIME
Sbjct: 361 SKPHGTVKAICIPEGAKYLKRKDIESIRNFAADHFNQEILPVFLNANRNWNSPVANFIME 420

Query: 421 SQRLELIRLMETQEEDVVLLTAGEHNKACSLLGKLRLECADLLETRGVVLRDPTLFSFLW 480
           SQRLELIRLMETQEEDVVLLTAGEHNKACSLLGKLRLECADLLETRGVVLRDPTLFSFLW
Sbjct: 421 SQRLELIRLMETQEEDVVLLTAGEHNKACSLLGKLRLECADLLETRGVVLRDPTLFSFLW 480

Query: 481 VVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYTEPKKARSQHYDLVLNGNEIGGGS 540
           VVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYTEPKKARSQHYDLVLNGNEIGGGS
Sbjct: 481 VVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYTEPKKARSQHYDLVLNGNEIGGGS 540

Query: 541 IRIHNAELQRYILATLLKEDVKMLSHLLQALDYGAPPHGGIALGLDRLICLVTGSPSIRD 600
           IRIHNAELQRYILATLLKEDVKMLSHLLQALDYGAPPHGGIALGLDRLICLVTGSPSIRD
Sbjct: 541 IRIHNAELQRYILATLLKEDVKMLSHLLQALDYGAPPHGGIALGLDRLICLVTGSPSIRD 600

Query: 601 VIAFPKSFRGHDLMSNTPDSVPPEELKPYHIRVSKPTDSKAERAH 645
           VIAFPKSFRGHDLMSNTPDSVPPEELKPYHIRVSKPTDSKAERAH
Sbjct: 601 VIAFPKSFRGHDLMSNTPDSVPPEELKPYHIRVSKPTDSKAERAH 645


>gi|45439306 aspartyl-tRNA synthetase [Homo sapiens]
          Length = 501

 Score = 76.6 bits (187), Expect = 6e-14
 Identities = 66/224 (29%), Positives = 106/224 (47%), Gaps = 21/224 (9%)

Query: 80  FLVLRDFDGLVQVIIPQ-DESAASVKKILCEAPVESVVQVSGTVISRPAGQENPKMPTGE 138
           FLVLR     VQ ++   D ++  + K       ES+V V G V  R   Q+       +
Sbjct: 77  FLVLRQQQFNVQALVAVGDHASKQMVKFAANINKESIVDVEGVV--RKVNQKIGSCTQQD 134

Query: 139 IEIKVKTAELLNACK-KLPFEIKNFVKK------------TEALRLQYRYLDLRSFQMQY 185
           +E+ V+   +++  + +LP ++ + V+              +  RL  R +DLR+   Q 
Sbjct: 135 VELHVQKIYVISLAEPRLPLQLDDAVRPEAEGEEEGRATVNQDTRLDNRVIDLRTSTSQA 194

Query: 186 NLRLRSQMVMKMREYLCNLHGFVDIETPTLFKR-TPGGAKEFLVPSREPGKFYSLPQSPQ 244
             RL+S +    RE L N  GFV+I+TP +    + GGA  F V   +   +  L QSPQ
Sbjct: 195 VFRLQSGICHLFRETLIN-KGFVEIQTPKIISAASEGGANVFTVSYFKNNAY--LAQSPQ 251

Query: 245 QFKQLLMVGGLDRYFQVARCYRDEGSRPDRQ-PEFTQIDIEMSF 287
            +KQ+ +    ++ F +   +R E S   R   EF  +DIEM+F
Sbjct: 252 LYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTEFVGLDIEMAF 295



 Score = 53.1 bits (126), Expect = 8e-07
 Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 8/104 (7%)

Query: 508 HPSDIHLLYTEP---KKARSQHYDLVLNGNEIGGGSIRIHNAEL--QRYILATLLKEDVK 562
           +P  +   YT P      +S  YD+ + G EI  G+ RIH+ +L  +R +   +   D++
Sbjct: 394 YPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHHGI---DLE 450

Query: 563 MLSHLLQALDYGAPPHGGIALGLDRLICLVTGSPSIRDVIAFPK 606
            +   + +  +GAPPH G  +GL+R+  L  G  ++R    FP+
Sbjct: 451 KIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPR 494


>gi|194272210 lysyl-tRNA synthetase isoform 1 [Homo sapiens]
          Length = 625

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 56/178 (31%), Positives = 94/178 (52%), Gaps = 9/178 (5%)

Query: 129 QENP-KMPTGEIEIKVKTAELLNACKKLPFEIKNFVKKTEALRLQYRYLDL--RSFQMQY 185
           Q NP K   GE+ I      LL+ C  +   + +F  K +  R + RYLDL    F  Q 
Sbjct: 213 QGNPGKTKKGELSIIPYEITLLSPCLHMLPHL-HFGLKDKETRYRQRYLDLILNDFVRQK 271

Query: 186 NLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGA--KEFLVPSREPGKFYSLPQSP 243
            + +RS+++  +R +L  L GF++IETP +    PGGA  K F+    E      +  +P
Sbjct: 272 FI-IRSKIITYIRSFLDEL-GFLEIETP-MMNIIPGGAVAKPFITYHNELDMNLYMRIAP 328

Query: 244 QQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQTGIQSLIEGLL 301
           + + ++L+VGG+DR +++ R +R+EG      PEFT  +  M++ D   +  + E ++
Sbjct: 329 ELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEKMV 386



 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 9/119 (7%)

Query: 496 ELESAHHPFTAPHPSDIHLL--YTEPKKARSQHYDLVLNGNEIGGGSIRIHNAELQRYIL 553
           E+   +  F   HP  +  L  +   K+  ++ ++L +   EI      +++   QR + 
Sbjct: 481 EVTCINPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDPMRQRQLF 540

Query: 554 ATLLK-----EDVKML--SHLLQALDYGAPPHGGIALGLDRLICLVTGSPSIRDVIAFP 605
               K     +D  M    +   AL+YG PP  G  +G+DR+   +T S +I++V+ FP
Sbjct: 541 EEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFP 599


>gi|5031815 lysyl-tRNA synthetase isoform 2 [Homo sapiens]
          Length = 597

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 56/178 (31%), Positives = 94/178 (52%), Gaps = 9/178 (5%)

Query: 129 QENP-KMPTGEIEIKVKTAELLNACKKLPFEIKNFVKKTEALRLQYRYLDL--RSFQMQY 185
           Q NP K   GE+ I      LL+ C  +   + +F  K +  R + RYLDL    F  Q 
Sbjct: 185 QGNPGKTKKGELSIIPYEITLLSPCLHMLPHL-HFGLKDKETRYRQRYLDLILNDFVRQK 243

Query: 186 NLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGA--KEFLVPSREPGKFYSLPQSP 243
            + +RS+++  +R +L  L GF++IETP +    PGGA  K F+    E      +  +P
Sbjct: 244 FI-IRSKIITYIRSFLDEL-GFLEIETP-MMNIIPGGAVAKPFITYHNELDMNLYMRIAP 300

Query: 244 QQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQTGIQSLIEGLL 301
           + + ++L+VGG+DR +++ R +R+EG      PEFT  +  M++ D   +  + E ++
Sbjct: 301 ELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEKMV 358



 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 9/119 (7%)

Query: 496 ELESAHHPFTAPHPSDIHLL--YTEPKKARSQHYDLVLNGNEIGGGSIRIHNAELQRYIL 553
           E+   +  F   HP  +  L  +   K+  ++ ++L +   EI      +++   QR + 
Sbjct: 453 EVTCINPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDPMRQRQLF 512

Query: 554 ATLLK-----EDVKML--SHLLQALDYGAPPHGGIALGLDRLICLVTGSPSIRDVIAFP 605
               K     +D  M    +   AL+YG PP  G  +G+DR+   +T S +I++V+ FP
Sbjct: 513 EEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFP 571


>gi|4758762 asparaginyl-tRNA synthetase [Homo sapiens]
          Length = 548

 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 67/245 (27%), Positives = 111/245 (45%), Gaps = 17/245 (6%)

Query: 63  GQEVTLCGWI-QYRRQNT---FLVLRDFDGLVQVIIPQDESAASVKKILCEAPVESVVQV 118
           GQ V + GW+ + RRQ     FLVLRD  G +Q ++  DE       +L     ES V V
Sbjct: 125 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVL-ADELCQCYNGVLLS--TESSVAV 181

Query: 119 SGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKNFVKKTEALRLQYRYLDL 178
            G +   P G++ P    G  E+     EL+        +     +    ++L  R++ +
Sbjct: 182 YGMLNLTPKGKQAP----GGHELSCDFWELIGLAPAGGADNLINEESDVDVQLNNRHMMI 237

Query: 179 RSFQMQYNLRLRSQMVMKMREYLCNLHGFVDIETPTLFK-RTPGGAKEFLVPSREPGKFY 237
           R   M   L+ RS +    R++  +  G+ ++  PTL + +  GGA  F +     G+  
Sbjct: 238 RGENMSKILKARSMVTRCFRDHFFD-RGYYEVTPPTLVQTQVEGGATLFKLDYF--GEEA 294

Query: 238 SLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQ-PEFTQIDIEMSFVDQTGIQSL 296
            L QS Q + +  +   L   F +A+ YR E SR  R   E+T ++ E  F+    + + 
Sbjct: 295 FLTQSSQLYLETCL-PALGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFDDLLNR 353

Query: 297 IEGLL 301
           +E L+
Sbjct: 354 LEDLV 358



 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 9/104 (8%)

Query: 509 PSDIHLLYTE--PKKAR-SQHYDLVL-NGNEIGGGSIRIHNAELQRYILATLLKEDVKML 564
           P +I   Y +  P+ +R ++  D+++ N  EI GGS+RI ++E    ILA   +E +   
Sbjct: 441 PVEIKSFYMQRCPEDSRLTESVDVLMPNVGEIVGGSMRIFDSE---EILAGYKREGIDPT 497

Query: 565 SHL--LQALDYGAPPHGGIALGLDRLICLVTGSPSIRDVIAFPK 606
            +        YG  PHGG  LGL+R +  +     IRDV  +P+
Sbjct: 498 PYYWYTDQRKYGTCPHGGYGLGLERFLTWILNRYHIRDVCLYPR 541


>gi|226491502 asparaginyl-tRNA synthetase 2, mitochondrial [Homo
           sapiens]
          Length = 477

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 9/109 (8%)

Query: 504 FTAPHPSDIHLLYTEPKKARSQH----YDLVLNG-NEIGGGSIRIHNAELQRYILATLLK 558
           F   +P  +   Y    +   QH     DL++ G  E+ GG +R    E   ++   L +
Sbjct: 365 FVINYPLTLKPFYMRDNEDGPQHTVAAVDLLVPGVGELFGGGLR---EERYHFLEERLAR 421

Query: 559 EDV-KMLSHLLQALDYGAPPHGGIALGLDRLICLVTGSPSIRDVIAFPK 606
             + ++    L    +G+ PHGG  +G +R +  + G  +I+DVI FP+
Sbjct: 422 SGLTEVYQWYLDLRRFGSVPHGGFGMGFERYLQCILGVDNIKDVIPFPR 470


>gi|80861486 granule cell antiserum positive 14 [Homo sapiens]
          Length = 834

 Score = 33.1 bits (74), Expect = 0.81
 Identities = 35/114 (30%), Positives = 48/114 (42%), Gaps = 23/114 (20%)

Query: 132 PKMPTGEIEIKV-KTAELLNACKKLPFEIKNFVKKTEALRLQYRYLDLRSFQMQYNLRLR 190
           P  P  E   KV K  +LLN  K+L  EIK   +K + L LQ              L  +
Sbjct: 703 PSSPEPEDGDKVYKNEDLLNEIKQLKDEIKKKDEKIQLLELQ--------------LATQ 748

Query: 191 SQMVMKMREYLCNLHGFVDIETPTLFKRTPGGAKEFLVPSREP--GKFYSLPQS 242
                K +E  C    + D  T T ++R PGG   +  PS  P  G F  +P++
Sbjct: 749 HICHQKCKEEKCT---YADKYTQTPWRRIPGG---YSAPSFSPWQGSFQGIPRT 796


>gi|4502171 adenine phosphoribosyltransferase isoform a [Homo
           sapiens]
          Length = 180

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 3/32 (9%)

Query: 436 DVVLLTAGEHNKACSLLGKLR---LECADLLE 464
           D +L T G  N AC LLG+L+   LEC  L+E
Sbjct: 127 DDLLATGGTMNAACELLGRLQAEVLECVSLVE 158


>gi|4502523 calcium channel, voltage-dependent, N type, alpha 1B
            subunit [Homo sapiens]
          Length = 2339

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 9/82 (10%)

Query: 557  LKEDVKMLSHLLQALDYGAPPHG----GIALGLDRLIC----LVTGSPSIRDVIAFPKSF 608
            L  DV+M S   +  D G P  G    G A  + RL      +   SP  R +    +  
Sbjct: 1971 LAVDVQMQSITRRGPD-GEPQPGLESQGRAASMPRLAAETQPVTDASPMKRSISTLAQRP 2029

Query: 609  RGHDLMSNTPDSVPPEELKPYH 630
            RG  L S TPD  PP +   +H
Sbjct: 2030 RGTHLCSTTPDRPPPSQASSHH 2051


>gi|7656967 cadherin EGF LAG seven-pass G-type receptor 1 [Homo
           sapiens]
          Length = 3014

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 14/66 (21%)

Query: 526 HYDLVLNGNE-IGGGS-------------IRIHNAELQRYILATLLKEDVKMLSHLLQAL 571
           HY LV   +  +GGGS              +IHN+     + A L +E+V+  S  ++A+
Sbjct: 601 HYRLVDTASTFLGGGSAGPKNPAPTPDFPFQIHNSSGWITVCAELDREEVEHYSFGVEAV 660

Query: 572 DYGAPP 577
           D+G+PP
Sbjct: 661 DHGSPP 666


>gi|28827782 zinc fingers and homeoboxes 3 [Homo sapiens]
          Length = 956

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 3/64 (4%)

Query: 87  DGLVQVIIPQDESAASVKKILCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTA 146
           DG  ++II +      +K    +A  + +  +   V S+P G+  PK+ TGE+E++    
Sbjct: 174 DGQAEIIITKTPIMKIMKG---KAEAKKIHTLKENVPSQPVGEALPKLSTGEMEVREGDH 230

Query: 147 ELLN 150
             +N
Sbjct: 231 SFIN 234


>gi|158631177 homeodomain leucine zipper protein [Homo sapiens]
          Length = 550

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 208 VDIETPTLFKRTPGGAKEFLVPSREPGKFYSLPQSPQQFKQLLMVGG 254
           + I  PTL K  P   K   V   EP +   LPQS Q+ K+ LM  G
Sbjct: 165 IGIGPPTLSK--PTQTKGLKVEPEEPSQMPPLPQSHQKLKESLMTPG 209


>gi|17149834 sortilin 1 preproprotein [Homo sapiens]
          Length = 831

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 2/59 (3%)

Query: 297 IEGLLQYSWPNDKDPVVVPFPTMTFAEVLATYGTDK--PDTRFGMKIIDISDVFRNTEI 353
           + G +  SW  D   V++   T     V+ T+G  K      +G    DI+D+  NT I
Sbjct: 108 LRGSVSLSWVGDSTGVILVLTTFHVPLVIMTFGQSKLYRSEDYGKNFKDITDLINNTFI 166


>gi|4759162 SRY-box 14 [Homo sapiens]
          Length = 240

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 10/119 (8%)

Query: 125 RPAGQENPKMPTGEIEIKVKTA-ELLNACKKLPFEIKNFVKKTEALRLQYRYLDLRSFQM 183
           R   QENPKM   EI  ++    +LL+  +K P+         EA RL+ +++       
Sbjct: 24  RKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPY-------IDEAKRLRAQHMKEHP-DY 75

Query: 184 QYNLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGAKEFLVPSREPGKFYSLPQS 242
           +Y  R + + ++K   Y+  L    D + P      P GA + L+ + E  + +  P S
Sbjct: 76  KYRPRRKPKNLLKKDRYVFPLPYLGDTD-PLKAAGLPVGASDGLLSAPEKARAFLPPAS 133


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.138    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,728,438
Number of Sequences: 37866
Number of extensions: 1197998
Number of successful extensions: 2476
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2464
Number of HSP's gapped (non-prelim): 19
length of query: 645
length of database: 18,247,518
effective HSP length: 109
effective length of query: 536
effective length of database: 14,120,124
effective search space: 7568386464
effective search space used: 7568386464
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.