Guide to the Human Genome
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Name: APRT Sequence: fasta or formatted (180aa) NCBI GI: 4502171
Description:

adenine phosphoribosyltransferase isoform a

Referenced in:

Purine Biosynthesis and Catabolism

Other entries for this name:
alt prot [134aa] adenine phosphoribosyltransferase isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         16           2
 C cysteine            1.7          3           1
 D aspartate           5.0          9           2
 E glutamate           7.2         13           1
 F phenylalanine       4.4          8           2
 G glycine             9.4         17           2
 H histidine           1.1          2           1
 I isoleucine          3.9          7           1
 K lysine              4.4          8           1
 L leucine            16.1         29           2
 M methionine          1.1          2           1
 N asparagine          0.6          1           1
 P proline             6.1         11           1
 Q glutamine           3.9          7           1
 R arginine            6.7         12           1
 S serine              6.1         11           1
 T threonine           3.3          6           1
 V valine              7.2         13           4
 W tryptophan          0.6          1           1
 Y tyrosine            2.2          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   adenine phosphoribosyltransferase isoform a 
APRT                  0.728   adenine phosphoribosyltransferase isoform b 
DARS2                 0.018   aspartyl-tRNA synthetase 2, mitochondrial 
DNAH14                0.012   dynein, axonemal, heavy polypeptide 14 isoform 1 [H...
DNAH14                0.012   dynein, axonemal, heavy polypeptide 14 isoform 2 [H...
LOC729196             0.012   PREDICTED: similar to unc-93 homolog B1 (C. elegans...
LOC729196             0.012   PREDICTED: similar to unc-93 homolog B1 (C. elegans...
DNAH14                0.012   dynein, axonemal, heavy polypeptide 14 isoform 3 [H...
URM1                  0.009   ubiquitin related modifier 1 homolog isoform a [Homo...
UBA7                  0.009   ubiquitin-like modifier activating enzyme 7 
ABHD2                 0.009   alpha/beta hydrolase domain containing protein 2 [Ho...
ABHD2                 0.009   alpha/beta hydrolase domain containing protein 2 [Ho...
PRTFDC1               0.009   phosphoribosyl transferase domain containing 1 
ARMC3                 0.006   armadillo repeat containing 3 
PTPN13                0.006   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.006   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.006   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.006   protein tyrosine phosphatase, non-receptor type 13 is...
UMPS                  0.006   uridine monophosphate synthase 
MCM4                  0.006   minichromosome maintenance complex component 4 [Homo...
MCM4                  0.006   minichromosome maintenance complex component 4 [Homo...
FREM1                 0.006   FRAS1 related extracellular matrix 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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