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Search of human proteins with 40548420
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|40548420 collectin sub-family member 11 isoform b [Homo
sapiens]
(268 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|40548420 collectin sub-family member 11 isoform b [Homo sapiens] 548 e-156
gi|13128972 collectin sub-family member 11 isoform a [Homo sapiens] 427 e-120
gi|5453619 collectin sub-family member 10 [Homo sapiens] 243 2e-64
gi|61699226 pulmonary surfactant-associated protein D precursor ... 108 4e-24
gi|4557739 soluble mannose-binding lectin precursor [Homo sapiens] 101 6e-22
gi|38888175 surfactant, pulmonary-associated protein A1B [Homo s... 85 8e-17
gi|148886696 surfactant protein A2 [Homo sapiens] 81 8e-16
gi|146149162 surfactant, pulmonary-associated protein A2 [Homo s... 81 8e-16
gi|147903070 surfactant protein A1 [Homo sapiens] 80 2e-15
gi|18641360 collectin sub-family member 12 [Homo sapiens] 75 6e-14
gi|223029384 CD209 molecule isoform 7 [Homo sapiens] 65 5e-11
gi|223029380 CD209 molecule isoform 5 [Homo sapiens] 65 5e-11
gi|223278347 C-type lectin domain family 4, member M isoform 9 [... 65 6e-11
gi|223278337 C-type lectin domain family 4, member M isoform 12 ... 65 6e-11
gi|223278335 C-type lectin domain family 4, member M isoform 2 [... 65 6e-11
gi|223278350 C-type lectin domain family 4, member M isoform 8 [... 65 6e-11
gi|42542390 C-type lectin domain family 4, member M isoform 1 [H... 65 6e-11
gi|223278339 C-type lectin domain family 4, member M isoform 7 [... 65 8e-11
gi|223029386 CD209 molecule isoform 3 [Homo sapiens] 64 2e-10
gi|223029382 CD209 molecule isoform 6 [Homo sapiens] 64 2e-10
gi|10863957 CD209 molecule isoform 1 [Homo sapiens] 64 2e-10
gi|223278342 C-type lectin domain family 4, member M isoform 11 ... 64 2e-10
gi|13994280 C1q and tumor necrosis factor related protein 7 isof... 63 3e-10
gi|206597454 C1q and tumor necrosis factor related protein 7 iso... 63 3e-10
gi|206597452 C1q and tumor necrosis factor related protein 7 iso... 63 3e-10
gi|148728186 C-type lectin domain family 3 member A [Homo sapiens] 62 4e-10
gi|223029388 CD209 molecule isoform 4 [Homo sapiens] 61 1e-09
gi|118600983 chondroitin sulfate proteoglycan 3 [Homo sapiens] 61 1e-09
gi|4506803 stem cell growth factor precursor [Homo sapiens] 60 2e-09
gi|110735435 collagen, type V, alpha 3 preproprotein [Homo sapiens] 60 3e-09
>gi|40548420 collectin sub-family member 11 isoform b [Homo sapiens]
Length = 268
Score = 548 bits (1413), Expect = e-156
Identities = 268/268 (100%), Positives = 268/268 (100%)
Query: 1 MTPALCRSSSLASKGMRERRETKAPPDGLEESAPREKKQSQPVVTASDISKRKCTSSFVE 60
MTPALCRSSSLASKGMRERRETKAPPDGLEESAPREKKQSQPVVTASDISKRKCTSSFVE
Sbjct: 1 MTPALCRSSSLASKGMRERRETKAPPDGLEESAPREKKQSQPVVTASDISKRKCTSSFVE 60
Query: 61 MGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLPCECSQLRKAIG 120
MGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLPCECSQLRKAIG
Sbjct: 61 MGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLPCECSQLRKAIG 120
Query: 121 EMDNQVSQLTSELKFIKNAVAGVRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMPKDE 180
EMDNQVSQLTSELKFIKNAVAGVRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMPKDE
Sbjct: 121 EMDNQVSQLTSELKFIKNAVAGVRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMPKDE 180
Query: 181 AANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPNNAYDEEDCV 240
AANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPNNAYDEEDCV
Sbjct: 181 AANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPNNAYDEEDCV 240
Query: 241 EMVASGGWNDVACHTTMYFMCEFDKENM 268
EMVASGGWNDVACHTTMYFMCEFDKENM
Sbjct: 241 EMVASGGWNDVACHTTMYFMCEFDKENM 268
>gi|13128972 collectin sub-family member 11 isoform a [Homo sapiens]
Length = 271
Score = 427 bits (1099), Expect = e-120
Identities = 205/207 (99%), Positives = 206/207 (99%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLPCECSQLRKAIGE 121
G +GDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLPCECSQLRKAIGE
Sbjct: 65 GEKGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLPCECSQLRKAIGE 124
Query: 122 MDNQVSQLTSELKFIKNAVAGVRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMPKDEA 181
MDNQVSQLTSELKFIKNAVAGVRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMPKDEA
Sbjct: 125 MDNQVSQLTSELKFIKNAVAGVRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMPKDEA 184
Query: 182 ANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPNNAYDEEDCVE 241
ANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPNNAYDEEDCVE
Sbjct: 185 ANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPNNAYDEEDCVE 244
Query: 242 MVASGGWNDVACHTTMYFMCEFDKENM 268
MVASGGWNDVACHTTMYFMCEFDKENM
Sbjct: 245 MVASGGWNDVACHTTMYFMCEFDKENM 271
>gi|5453619 collectin sub-family member 10 [Homo sapiens]
Length = 277
Score = 243 bits (619), Expect = 2e-64
Identities = 103/205 (50%), Positives = 154/205 (75%), Gaps = 3/205 (1%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLPCECSQLRKAIGE 121
G +G++GD G +G++G K GPIG KG+KG+ G +G PG G+ G C+C + RK +G+
Sbjct: 74 GIKGELGDMGDRGNIG---KTGPIGKKGDKGEKGLLGIPGEKGKAGTVCDCGRYRKFVGQ 130
Query: 122 MDNQVSQLTSELKFIKNAVAGVRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMPKDEA 181
+D +++L + +KF+KN +AG+RETE K Y +V+EEK Y ++ C+ RGG L+MPKDEA
Sbjct: 131 LDISIARLKTSMKFVKNVIAGIRETEEKFYYIVQEEKNYRESLTHCRIRGGMLAMPKDEA 190
Query: 182 ANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPNNAYDEEDCVE 241
AN L+A Y+A++G RVFIG+NDLE+EG ++++D++P++ ++ W GEP++ Y EDCVE
Sbjct: 191 ANTLIADYVAKSGFFRVFIGVNDLEREGQYMFTDNTPLQNYSNWNEGEPSDPYGHEDCVE 250
Query: 242 MVASGGWNDVACHTTMYFMCEFDKE 266
M++SG WND CH TMYF+CEF K+
Sbjct: 251 MLSSGRWNDTECHLTMYFVCEFIKK 275
>gi|61699226 pulmonary surfactant-associated protein D precursor
[Homo sapiens]
Length = 375
Score = 108 bits (271), Expect = 4e-24
Identities = 67/206 (32%), Positives = 94/206 (45%), Gaps = 5/206 (2%)
Query: 60 EMGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLPCECSQLRKAI 119
E G G+ G G G++G G G G G KGD G G G GE GLP + + LR+ +
Sbjct: 173 ERGVPGNTGAAGSAGAMGPQGSPGARGPPGLKGDKGIPGDKGAKGESGLP-DVASLRQQV 231
Query: 120 GEMDNQVSQLTSELKFIKNA--VAGVRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMP 177
+ QV L + K + KI+ K + +AQL C GG L+ P
Sbjct: 232 EALQGQVQHLQAAFSQYKKVELFPNGQSVGEKIFKTAGFVKPFTEAQLLCTQAGGQLASP 291
Query: 178 KDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPNNAYDEE 237
+ A N + + A F+ + D + EG F Y + ++ W GEPN+ E
Sbjct: 292 RSAAENAALQQLVVAKNEA-AFLSMTDSKTEGKFTYPTGESL-VYSNWAPGEPNDDGGSE 349
Query: 238 DCVEMVASGGWNDVACHTTMYFMCEF 263
DCVE+ +G WND AC +CEF
Sbjct: 350 DCVEIFTNGKWNDRACGEKRLVVCEF 375
Score = 52.4 bits (124), Expect = 4e-07
Identities = 24/46 (52%), Positives = 27/46 (58%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
G+ G G GQ G VG G G +G G KGD+G GPPGP G PG
Sbjct: 70 GAAGQAGMPGQAGPVGPKGDNGSVGEPGPKGDTGPSGPPGPPGVPG 115
Score = 51.2 bits (121), Expect = 9e-07
Identities = 25/54 (46%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSK------GEKGDSGDIGPPGPNGEPGLP 109
G +GD G G G G G+ GP+G K GE G GD GP GP G PG+P
Sbjct: 61 GEKGDPGLPGAAGQAGMPGQAGPVGPKGDNGSVGEPGPKGDTGPSGPPGPPGVP 114
Score = 50.1 bits (118), Expect = 2e-06
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
G +G+ GD G G+ G+ G G G G KGD+G +G PGP G+ G
Sbjct: 58 GPRGEKGDPGLPGAAGQAGMPGQAGPVGPKGDNGSVGEPGPKGDTG 103
Score = 45.1 bits (105), Expect = 7e-05
Identities = 34/108 (31%), Positives = 45/108 (41%), Gaps = 3/108 (2%)
Query: 2 TPALCRS--SSLASKGMRERRETKAPPDGLEESAPREKKQSQPVVTASDISKRKCTSSFV 59
T +C S S L + R+ RE G + P Q+ A + + S
Sbjct: 36 TLVMCSSVESGLPGRDGRDGREGPRGEKG-DPGLPGAAGQAGMPGQAGPVGPKGDNGSVG 94
Query: 60 EMGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
E G +GD G G G G G G G G++G+ G G PGP GE G
Sbjct: 95 EPGPKGDTGPSGPPGPPGVPGPAGREGPLGKQGNIGPQGKPGPKGEAG 142
Score = 28.5 bits (62), Expect = 6.4
Identities = 13/29 (44%), Positives = 14/29 (48%)
Query: 86 GSKGEKGDSGDIGPPGPNGEPGLPCECSQ 114
G G G G GP G G+PGLP Q
Sbjct: 46 GLPGRDGRDGREGPRGEKGDPGLPGAAGQ 74
>gi|4557739 soluble mannose-binding lectin precursor [Homo sapiens]
Length = 248
Score = 101 bits (252), Expect = 6e-22
Identities = 66/213 (30%), Positives = 100/213 (46%), Gaps = 25/213 (11%)
Query: 62 GSQGDMGDKGQKGSVGR--HGKIGPIGSKGEKGDSGDIGPPGPNGEPGLPCECSQLRKAI 119
G G G KG+KG G+ G GP G G G+ G G PGP G+ G P +
Sbjct: 48 GKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKSP------ 101
Query: 120 GEMDNQVSQLTSELKFIKNAVAGVR---------ETESKIYLLVKEEKRYADAQLSCQGR 170
D S SE K ++ +A ++ + +K +L E + + C
Sbjct: 102 ---DGDSSLAASERKALQTEMARIKKWLTFSLGKQVGNKFFLTNGEIMTFEKVKALCVKF 158
Query: 171 GGTLSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEP 230
+++ P++ A NG + + + F+GI D + EG FV + + T+ W GEP
Sbjct: 159 QASVATPRNAAENGAIQNLIKE----EAFLGITDEKTEGQFVDLTGNRL-TYTNWNEGEP 213
Query: 231 NNAYDEEDCVEMVASGGWNDVACHTTMYFMCEF 263
NNA +EDCV ++ +G WNDV C T+ +CEF
Sbjct: 214 NNAGSDEDCVLLLKNGQWNDVPCSTSHLAVCEF 246
>gi|38888175 surfactant, pulmonary-associated protein A1B [Homo
sapiens]
Length = 248
Score = 84.7 bits (208), Expect = 8e-17
Identities = 62/229 (27%), Positives = 100/229 (43%), Gaps = 39/229 (17%)
Query: 67 MGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGE-------------PGLPCEC- 112
+G G G+ G HG G G G KGD G GP GP GE PG+P EC
Sbjct: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECG 86
Query: 113 ------------------SQLRKAIGEMDNQVSQLTSELKFIKNAVAGVRETESKIYLLV 154
+L+ + + +Q+ Q L ++ ++ V E K++
Sbjct: 87 EKGEPGERGPPGLPAHLDEELQATLHDFRHQILQTRGALS-LQGSIMTVGE---KVFSSN 142
Query: 155 KEEKRYADAQLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYS 214
+ + Q +C GG +++P++ N +A+++ + ++G+ + G F YS
Sbjct: 143 GQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKKYN-TYAYVGLTEGPSPGDFRYS 201
Query: 215 DHSPMRTFNKWRSGEPNNAYDEEDCVEMVASGGWNDVACHTTMYFMCEF 263
D +P+ + W GEP +E CVEM G WND C + +CEF
Sbjct: 202 DGTPV-NYTNWYRGEPAGR-GKEQCVEMYTDGQWNDRNCLYSRLTICEF 248
>gi|148886696 surfactant protein A2 [Homo sapiens]
Length = 248
Score = 81.3 bits (199), Expect = 8e-16
Identities = 61/229 (26%), Positives = 98/229 (42%), Gaps = 39/229 (17%)
Query: 67 MGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGE--------------------- 105
+G G G+ G HG G G G KGD G GP GP GE
Sbjct: 27 VGSPGIPGTPGSHGLPGRDGRDGVKGDPGPPGPMGPPGETPCPPGNNGLPGAPGVPGERG 86
Query: 106 ----------PGLPCEC-SQLRKAIGEMDNQVSQLTSELKFIKNAVAGVRETESKIYLLV 154
PGLP +L+ + + +Q+ Q L ++ ++ V E K++
Sbjct: 87 EKGEAGERGPPGLPAHLDEELQATLHDFRHQILQTRGALS-LQGSIMTVGE---KVFSSN 142
Query: 155 KEEKRYADAQLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYS 214
+ + Q +C GG +++P++ N +A+++ + ++G+ + G F YS
Sbjct: 143 GQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKKYN-TYAYVGLTEGPSPGDFRYS 201
Query: 215 DHSPMRTFNKWRSGEPNNAYDEEDCVEMVASGGWNDVACHTTMYFMCEF 263
D +P+ + W GEP +E CVEM G WND C + +CEF
Sbjct: 202 DGTPV-NYTNWYRGEPAGR-GKEQCVEMYTDGQWNDRNCLYSRLTICEF 248
>gi|146149162 surfactant, pulmonary-associated protein A2 [Homo
sapiens]
Length = 248
Score = 81.3 bits (199), Expect = 8e-16
Identities = 61/229 (26%), Positives = 98/229 (42%), Gaps = 39/229 (17%)
Query: 67 MGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGE--------------------- 105
+G G G+ G HG G G G KGD G GP GP GE
Sbjct: 27 VGSPGIPGTPGSHGLPGRDGRDGVKGDPGPPGPMGPPGETPCPPGNNGLPGAPGVPGERG 86
Query: 106 ----------PGLPCEC-SQLRKAIGEMDNQVSQLTSELKFIKNAVAGVRETESKIYLLV 154
PGLP +L+ + + +Q+ Q L ++ ++ V E K++
Sbjct: 87 EKGEAGERGPPGLPAHLDEELQATLHDFRHQILQTRGALS-LQGSIMTVGE---KVFSSN 142
Query: 155 KEEKRYADAQLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYS 214
+ + Q +C GG +++P++ N +A+++ + ++G+ + G F YS
Sbjct: 143 GQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKKYN-TYAYVGLTEGPSPGDFRYS 201
Query: 215 DHSPMRTFNKWRSGEPNNAYDEEDCVEMVASGGWNDVACHTTMYFMCEF 263
D +P+ + W GEP +E CVEM G WND C + +CEF
Sbjct: 202 DGTPV-NYTNWYRGEPAGR-GKEQCVEMYTDGQWNDRNCLYSRLTICEF 248
>gi|147903070 surfactant protein A1 [Homo sapiens]
Length = 245
Score = 79.7 bits (195), Expect = 2e-15
Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 39/219 (17%)
Query: 67 MGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGE-------------PGLPCEC- 112
+G G G+ G HG G G G KGD G GP GP GE PG+P EC
Sbjct: 27 VGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECG 86
Query: 113 ------------------SQLRKAIGEMDNQVSQLTSELKFIKNAVAGVRETESKIYLLV 154
+L+ + + +Q+ Q L ++ ++ V E K++
Sbjct: 87 EKGEPGERGPPGLPAHLDEELQATLHDFRHQILQTRGALS-LQGSIMTVGE---KVFSSN 142
Query: 155 KEEKRYADAQLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYS 214
+ + Q +C GG +++P++ N +A+++ + ++G+ + G F YS
Sbjct: 143 GQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKKYN-TYAYVGLTEGPSPGDFRYS 201
Query: 215 DHSPMRTFNKWRSGEPNNAYDEEDCVEMVASGGWNDVAC 253
D +P+ + W GEP +E CVEM G WND C
Sbjct: 202 DGTPV-NYTNWYRGEPAGR-GKEQCVEMYTDGQWNDRNC 238
>gi|18641360 collectin sub-family member 12 [Homo sapiens]
Length = 742
Score = 75.1 bits (183), Expect = 6e-14
Identities = 56/211 (26%), Positives = 89/211 (42%), Gaps = 16/211 (7%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLPCECSQLRKAIGE 121
G QG G +G +G+VG G GP G G G G GP GP G PG L
Sbjct: 539 GPQGPPGFQGLQGTVGEPGVPGPRGLPGLPGVPGMPGPKGPPGPPGPSGAVVPLA----- 593
Query: 122 MDNQVSQLTSELKFIKNAVAGVRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMPKDEA 181
+ N+ + + + K Y E++ + DA+L C+ + L
Sbjct: 594 LQNEPTPAPED----NGCPPHWKNFTDKCYYFSVEKEIFEDAKLFCEDKSSHLVFINTRE 649
Query: 182 ANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPNN----AYDEE 237
+ + G +IG+ D E+E + + D + + W++G+P+N E
Sbjct: 650 EQQWIKKQMV--GRESHWIGLTDSERENEWKWLDGTSP-DYKNWKAGQPDNWGHGHGPGE 706
Query: 238 DCVEMVASGGWNDVACHTTMYFMCEFDKENM 268
DC ++ +G WND C F+CE D+E +
Sbjct: 707 DCAGLIYAGQWNDFQCEDVNNFICEKDRETV 737
Score = 55.1 bits (131), Expect = 6e-08
Identities = 26/48 (54%), Positives = 29/48 (60%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLP 109
G G+ G KG KGS G G G G G +G SGD GPPGP G+ GLP
Sbjct: 491 GPPGERGGKGSKGSQGPKGSRGSPGKPGPQGPSGDPGPPGPPGKEGLP 538
Score = 53.9 bits (128), Expect = 1e-07
Identities = 23/44 (52%), Positives = 29/44 (65%)
Query: 64 QGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
QG G +G +G G G GP G+KG+KG+ G+ GPPGP GE G
Sbjct: 442 QGPPGPRGPRGDRGSQGPPGPTGNKGQKGEKGEPGPPGPAGERG 485
Score = 50.1 bits (118), Expect = 2e-06
Identities = 23/46 (50%), Positives = 26/46 (56%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
GS+G G KG +GS G+ G GP G G G G G PGP G PG
Sbjct: 500 GSKGSQGPKGSRGSPGKPGPQGPSGDPGPPGPPGKEGLPGPQGPPG 545
Score = 48.9 bits (115), Expect = 5e-06
Identities = 23/48 (47%), Positives = 26/48 (54%)
Query: 60 EMGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
+ GSQG G G KG G G+ GP G GE+G G GPPG G G
Sbjct: 453 DRGSQGPPGPTGNKGQKGEKGEPGPPGPAGERGPIGPAGPPGERGGKG 500
Score = 48.5 bits (114), Expect = 6e-06
Identities = 21/48 (43%), Positives = 25/48 (52%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLP 109
G +G+ G+ G G G G IGP G GE+G G G GP G G P
Sbjct: 467 GQKGEKGEPGPPGPAGERGPIGPAGPPGERGGKGSKGSQGPKGSRGSP 514
Score = 48.1 bits (113), Expect = 8e-06
Identities = 33/95 (34%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Query: 14 KGMRERRETKAPPDGLEESAPR-EKKQSQPVVTASDISKRKCTSSFVEMGSQGDMGDKGQ 72
+G R R ++ PP + EK + P A + E G +G G +G
Sbjct: 448 RGPRGDRGSQGPPGPTGNKGQKGEKGEPGPPGPAGERGPIGPAGPPGERGGKGSKGSQGP 507
Query: 73 KGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
KGS G GK GP +G GD G GPPG G PG
Sbjct: 508 KGSRGSPGKPGP---QGPSGDPGPPGPPGKEGLPG 539
Score = 46.2 bits (108), Expect = 3e-05
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLP 109
G +G +G G G G G G G KG +G G GP GP+G+PG P
Sbjct: 482 GERGPIGPAGPPGERGGKGSKGSQGPKGSRGSPGKPGPQGPSGDPGPP 529
>gi|223029384 CD209 molecule isoform 7 [Homo sapiens]
Length = 312
Score = 65.5 bits (158), Expect = 5e-11
Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 111 ECSQLRKAIGEMD--NQVSQLTSELKFIKNAVAGVRET--------ESKIYLLVKEEKRY 160
E ++L+ A+GE+ +++ ++ EL ++K AV + + Y + ++ +
Sbjct: 126 ELTRLKAAVGELPEKSKLQEIYQELTWLKAAVERLCHPCPWEWTFFQGNCYFMSNSQRNW 185
Query: 161 ADAQLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMR 220
D+ +C+ G L + K + +++ ++G++DL +EG + + D SP+
Sbjct: 186 HDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNRF-TWMGLSDLNQEGTWQWVDGSPLL 244
Query: 221 TFNK--WRSGEPNNAYDEEDCVEMVASGGWNDVACHTTMYFMCE 262
K W GEPNN EEDC E + GWND C+ +++C+
Sbjct: 245 PSFKQYWNRGEPNNV-GEEDCAEF-SGNGWNDDKCNLAKFWICK 286
>gi|223029380 CD209 molecule isoform 5 [Homo sapiens]
Length = 268
Score = 65.5 bits (158), Expect = 5e-11
Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 111 ECSQLRKAIGEMD--NQVSQLTSELKFIKNAVAGVRET--------ESKIYLLVKEEKRY 160
E ++L+ A+GE+ +++ ++ EL ++K AV + + Y + ++ +
Sbjct: 82 ELTRLKAAVGELPEKSKLQEIYQELTWLKAAVERLCHPCPWEWTFFQGNCYFMSNSQRNW 141
Query: 161 ADAQLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMR 220
D+ +C+ G L + K + +++ ++G++DL +EG + + D SP+
Sbjct: 142 HDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNRF-TWMGLSDLNQEGTWQWVDGSPLL 200
Query: 221 TFNK--WRSGEPNNAYDEEDCVEMVASGGWNDVACHTTMYFMCE 262
K W GEPNN EEDC E + GWND C+ +++C+
Sbjct: 201 PSFKQYWNRGEPNNV-GEEDCAEF-SGNGWNDDKCNLAKFWICK 242
>gi|223278347 C-type lectin domain family 4, member M isoform 9
[Homo sapiens]
Length = 353
Score = 65.1 bits (157), Expect = 6e-11
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 111 ECSQLRKAIGEMDNQVSQ--LTSELKFIKNAVAGVRET--------ESKIYLLVKEEKRY 160
E +QL+ A+GE+ +Q Q + EL +K A + + Y + ++ +
Sbjct: 184 ELTQLKAAVGELPDQSKQQQIYQELTDLKTAFERLCRHCPKDWTFFQGNCYFMSNSQRNW 243
Query: 161 ADAQLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMR 220
D+ +CQ L + K + +++ ++G++DL +EG + + D SP+
Sbjct: 244 HDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFS-WMGLSDLNQEGTWQWVDGSPLS 302
Query: 221 -TFNK-WRSGEPNNAYDEEDCVEMVASGGWNDVACHTTMYFMCE 262
+F + W SGEPNN+ EDC E S GWND C Y++C+
Sbjct: 303 PSFQRYWNSGEPNNS-GNEDCAEFSGS-GWNDNRCDVDNYWICK 344
>gi|223278337 C-type lectin domain family 4, member M isoform 12
[Homo sapiens]
Length = 375
Score = 65.1 bits (157), Expect = 6e-11
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 111 ECSQLRKAIGEMDNQVSQ--LTSELKFIKNAVAGVRET--------ESKIYLLVKEEKRY 160
E +QL+ A+GE+ +Q Q + EL +K A + + Y + ++ +
Sbjct: 206 ELTQLKAAVGELPDQSKQQQIYQELTDLKTAFERLCRHCPKDWTFFQGNCYFMSNSQRNW 265
Query: 161 ADAQLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMR 220
D+ +CQ L + K + +++ ++G++DL +EG + + D SP+
Sbjct: 266 HDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFS-WMGLSDLNQEGTWQWVDGSPLS 324
Query: 221 -TFNK-WRSGEPNNAYDEEDCVEMVASGGWNDVACHTTMYFMCE 262
+F + W SGEPNN+ EDC E S GWND C Y++C+
Sbjct: 325 PSFQRYWNSGEPNNS-GNEDCAEFSGS-GWNDNRCDVDNYWICK 366
>gi|223278335 C-type lectin domain family 4, member M isoform 2
[Homo sapiens]
Length = 348
Score = 65.1 bits (157), Expect = 6e-11
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 111 ECSQLRKAIGEMDNQVSQ--LTSELKFIKNAVAGVRET--------ESKIYLLVKEEKRY 160
E +QL+ A+GE+ +Q Q + EL +K A + + Y + ++ +
Sbjct: 179 ELTQLKAAVGELPDQSKQQQIYQELTDLKTAFERLCRHCPKDWTFFQGNCYFMSNSQRNW 238
Query: 161 ADAQLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMR 220
D+ +CQ L + K + +++ ++G++DL +EG + + D SP+
Sbjct: 239 HDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFS-WMGLSDLNQEGTWQWVDGSPLS 297
Query: 221 -TFNK-WRSGEPNNAYDEEDCVEMVASGGWNDVACHTTMYFMCE 262
+F + W SGEPNN+ EDC E S GWND C Y++C+
Sbjct: 298 PSFQRYWNSGEPNNS-GNEDCAEFSGS-GWNDNRCDVDNYWICK 339
>gi|223278350 C-type lectin domain family 4, member M isoform 8
[Homo sapiens]
Length = 376
Score = 65.1 bits (157), Expect = 6e-11
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 111 ECSQLRKAIGEMDNQVSQ--LTSELKFIKNAVAGVRET--------ESKIYLLVKEEKRY 160
E +QL+ A+GE+ +Q Q + EL +K A + + Y + ++ +
Sbjct: 207 ELTQLKAAVGELPDQSKQQQIYQELTDLKTAFERLCRHCPKDWTFFQGNCYFMSNSQRNW 266
Query: 161 ADAQLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMR 220
D+ +CQ L + K + +++ ++G++DL +EG + + D SP+
Sbjct: 267 HDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFS-WMGLSDLNQEGTWQWVDGSPLS 325
Query: 221 -TFNK-WRSGEPNNAYDEEDCVEMVASGGWNDVACHTTMYFMCE 262
+F + W SGEPNN+ EDC E S GWND C Y++C+
Sbjct: 326 PSFQRYWNSGEPNNS-GNEDCAEFSGS-GWNDNRCDVDNYWICK 367
>gi|42542390 C-type lectin domain family 4, member M isoform 1 [Homo
sapiens]
Length = 399
Score = 65.1 bits (157), Expect = 6e-11
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 111 ECSQLRKAIGEMDNQVSQ--LTSELKFIKNAVAGVRET--------ESKIYLLVKEEKRY 160
E +QL+ A+GE+ +Q Q + EL +K A + + Y + ++ +
Sbjct: 230 ELTQLKAAVGELPDQSKQQQIYQELTDLKTAFERLCRHCPKDWTFFQGNCYFMSNSQRNW 289
Query: 161 ADAQLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMR 220
D+ +CQ L + K + +++ ++G++DL +EG + + D SP+
Sbjct: 290 HDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFS-WMGLSDLNQEGTWQWVDGSPLS 348
Query: 221 -TFNK-WRSGEPNNAYDEEDCVEMVASGGWNDVACHTTMYFMCE 262
+F + W SGEPNN+ EDC E S GWND C Y++C+
Sbjct: 349 PSFQRYWNSGEPNNS-GNEDCAEFSGS-GWNDNRCDVDNYWICK 390
>gi|223278339 C-type lectin domain family 4, member M isoform 7
[Homo sapiens]
Length = 263
Score = 64.7 bits (156), Expect = 8e-11
Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 111 ECSQLRKAIGEMD--NQVSQLTSELKFIKNAVAGVRET--------ESKIYLLVKEEKRY 160
E +QL+ A+GE+ +++ ++ EL +K AV + + Y + ++ +
Sbjct: 94 ELTQLKAAVGELPEKSKLQEIYQELTRLKAAVERLCRHCPKDWTFFQGNCYFMSNSQRNW 153
Query: 161 ADAQLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMR 220
D+ +CQ L + K + +++ ++G++DL +EG + + D SP+
Sbjct: 154 HDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFS-WMGLSDLNQEGTWQWVDGSPLS 212
Query: 221 -TFNK-WRSGEPNNAYDEEDCVEMVASGGWNDVACHTTMYFMCE 262
+F + W SGEPNN+ EDC E S GWND C Y++C+
Sbjct: 213 PSFQRYWNSGEPNNS-GNEDCAEFSGS-GWNDNRCDVDNYWICK 254
>gi|223029386 CD209 molecule isoform 3 [Homo sapiens]
Length = 380
Score = 63.5 bits (153), Expect = 2e-10
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 15/164 (9%)
Query: 111 ECSQLRKAIGEMDNQVSQ--LTSELKFIKNAVAGVRET--------ESKIYLLVKEEKRY 160
E ++L+ A+GE+ + Q + EL +K AV + + Y + ++ +
Sbjct: 194 ELTRLKAAVGELPEKSKQQEIYQELTQLKAAVERLCHPCPWEWTFFQGNCYFMSNSQRNW 253
Query: 161 ADAQLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMR 220
D+ +C+ G L + K + +++ ++G++DL +EG + + D SP+
Sbjct: 254 HDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNRF-TWMGLSDLNQEGTWQWVDGSPLL 312
Query: 221 TFNK--WRSGEPNNAYDEEDCVEMVASGGWNDVACHTTMYFMCE 262
K W GEPNN EEDC E + GWND C+ +++C+
Sbjct: 313 PSFKQYWNRGEPNNV-GEEDCAEF-SGNGWNDDKCNLAKFWICK 354
>gi|223029382 CD209 molecule isoform 6 [Homo sapiens]
Length = 360
Score = 63.5 bits (153), Expect = 2e-10
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 15/164 (9%)
Query: 111 ECSQLRKAIGEMDNQVSQ--LTSELKFIKNAVAGVRET--------ESKIYLLVKEEKRY 160
E ++L+ A+GE+ + Q + EL +K AV + + Y + ++ +
Sbjct: 174 ELTRLKAAVGELPEKSKQQEIYQELTQLKAAVERLCHPCPWEWTFFQGNCYFMSNSQRNW 233
Query: 161 ADAQLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMR 220
D+ +C+ G L + K + +++ ++G++DL +EG + + D SP+
Sbjct: 234 HDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNRF-TWMGLSDLNQEGTWQWVDGSPLL 292
Query: 221 TFNK--WRSGEPNNAYDEEDCVEMVASGGWNDVACHTTMYFMCE 262
K W GEPNN EEDC E + GWND C+ +++C+
Sbjct: 293 PSFKQYWNRGEPNNV-GEEDCAEF-SGNGWNDDKCNLAKFWICK 334
>gi|10863957 CD209 molecule isoform 1 [Homo sapiens]
Length = 404
Score = 63.5 bits (153), Expect = 2e-10
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 15/164 (9%)
Query: 111 ECSQLRKAIGEMDNQVSQ--LTSELKFIKNAVAGVRET--------ESKIYLLVKEEKRY 160
E ++L+ A+GE+ + Q + EL +K AV + + Y + ++ +
Sbjct: 218 ELTRLKAAVGELPEKSKQQEIYQELTQLKAAVERLCHPCPWEWTFFQGNCYFMSNSQRNW 277
Query: 161 ADAQLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMR 220
D+ +C+ G L + K + +++ ++G++DL +EG + + D SP+
Sbjct: 278 HDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNRF-TWMGLSDLNQEGTWQWVDGSPLL 336
Query: 221 TFNK--WRSGEPNNAYDEEDCVEMVASGGWNDVACHTTMYFMCE 262
K W GEPNN EEDC E + GWND C+ +++C+
Sbjct: 337 PSFKQYWNRGEPNNV-GEEDCAEF-SGNGWNDDKCNLAKFWICK 378
>gi|223278342 C-type lectin domain family 4, member M isoform 11
[Homo sapiens]
Length = 332
Score = 63.5 bits (153), Expect = 2e-10
Identities = 44/164 (26%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 111 ECSQLRKAIGEMD--NQVSQLTSELKFIKNAVAGVRET--------ESKIYLLVKEEKRY 160
E ++L+ A+GE+ +++ ++ EL +K AV + + Y + ++ +
Sbjct: 163 ELTELKAAVGELPEKSKLQEIYQELTQLKAAVERLCRHCPKDWTFFQGNCYFMSNSQRNW 222
Query: 161 ADAQLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMR 220
D+ +CQ L + K + +++ ++G++DL +EG + + D SP+
Sbjct: 223 HDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFS-WMGLSDLNQEGTWQWVDGSPLS 281
Query: 221 -TFNK-WRSGEPNNAYDEEDCVEMVASGGWNDVACHTTMYFMCE 262
+F + W SGEPNN+ EDC E S GWND C Y++C+
Sbjct: 282 PSFQRYWNSGEPNNS-GNEDCAEFSGS-GWNDNRCDVDNYWICK 323
>gi|13994280 C1q and tumor necrosis factor related protein 7 isoform
b [Homo sapiens]
Length = 289
Score = 62.8 bits (151), Expect = 3e-10
Identities = 31/62 (50%), Positives = 37/62 (59%), Gaps = 8/62 (12%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGP------NGEPGLP--CECS 113
G G +G G+KG G GK GPIG +GEKG+ G IGPPGP G+PGLP C C
Sbjct: 83 GKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCG 142
Query: 114 QL 115
+
Sbjct: 143 SI 144
Score = 39.7 bits (91), Expect = 0.003
Identities = 21/46 (45%), Positives = 25/46 (54%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
G+ G G G+ G GR G+ G G KGEKG +G G GP G G
Sbjct: 47 GANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAG 92
Score = 38.5 bits (88), Expect = 0.006
Identities = 21/50 (42%), Positives = 24/50 (48%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLPCE 111
G G G G G +G G+ G G KGEKG+ G G G G GL E
Sbjct: 44 GPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGE 93
>gi|206597454 C1q and tumor necrosis factor related protein 7
isoform b [Homo sapiens]
Length = 289
Score = 62.8 bits (151), Expect = 3e-10
Identities = 31/62 (50%), Positives = 37/62 (59%), Gaps = 8/62 (12%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGP------NGEPGLP--CECS 113
G G +G G+KG G GK GPIG +GEKG+ G IGPPGP G+PGLP C C
Sbjct: 83 GKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCG 142
Query: 114 QL 115
+
Sbjct: 143 SI 144
Score = 39.7 bits (91), Expect = 0.003
Identities = 21/46 (45%), Positives = 25/46 (54%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
G+ G G G+ G GR G+ G G KGEKG +G G GP G G
Sbjct: 47 GANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAG 92
Score = 38.5 bits (88), Expect = 0.006
Identities = 21/50 (42%), Positives = 24/50 (48%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLPCE 111
G G G G G +G G+ G G KGEKG+ G G G G GL E
Sbjct: 44 GPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGE 93
>gi|206597452 C1q and tumor necrosis factor related protein 7
isoform a [Homo sapiens]
Length = 296
Score = 62.8 bits (151), Expect = 3e-10
Identities = 31/62 (50%), Positives = 37/62 (59%), Gaps = 8/62 (12%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGP------NGEPGLP--CECS 113
G G +G G+KG G GK GPIG +GEKG+ G IGPPGP G+PGLP C C
Sbjct: 90 GKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCG 149
Query: 114 QL 115
+
Sbjct: 150 SI 151
Score = 39.7 bits (91), Expect = 0.003
Identities = 21/46 (45%), Positives = 25/46 (54%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
G+ G G G+ G GR G+ G G KGEKG +G G GP G G
Sbjct: 54 GANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAG 99
Score = 38.5 bits (88), Expect = 0.006
Identities = 21/50 (42%), Positives = 24/50 (48%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLPCE 111
G G G G G +G G+ G G KGEKG+ G G G G GL E
Sbjct: 51 GPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGE 100
>gi|148728186 C-type lectin domain family 3 member A [Homo sapiens]
Length = 197
Score = 62.4 bits (150), Expect = 4e-10
Identities = 45/160 (28%), Positives = 80/160 (50%), Gaps = 12/160 (7%)
Query: 114 QLRKAIGEMDNQVSQLTSELKFIKNAVA----GVRETE--SKIYLLVKEEKRYADAQLSC 167
++R G++ Q+ +L +E+ +K A +R T+ K YL + K + +A C
Sbjct: 36 RVRDKDGDLKTQIEKLWTEVNALKEIQALQTVCLRGTKVHKKCYLASEGLKHFHEANEDC 95
Query: 168 QGRGGTLSMPKDEAANGLMAAYLAQA--GLARVFIGINDLEKEGAFVYSDHSPMRTFNKW 225
+GG L +P++ + Y ++ G+ ++GIND+ EG FV + + +F W
Sbjct: 96 ISKGGILVIPRNSDEINALQDYGKRSLPGVNDFWLGINDMVTEGKFVDVNGIAI-SFLNW 154
Query: 226 RSGEPNNAYDEEDCV--EMVASGGWNDVACHTTMYFMCEF 263
+PN E+CV A G W+D AC ++ ++CEF
Sbjct: 155 DRAQPNGG-KRENCVLFSQSAQGKWSDEACRSSKRYICEF 193
>gi|223029388 CD209 molecule isoform 4 [Homo sapiens]
Length = 398
Score = 60.8 bits (146), Expect = 1e-09
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 21/164 (12%)
Query: 111 ECSQLRKAIGEMDNQVSQ--LTSELKFIKNAVAGVRET--------ESKIYLLVKEEKRY 160
E ++L+ A+GE+ + Q + EL +K AV + + Y + ++ +
Sbjct: 218 ELTRLKAAVGELPEKSKQQEIYQELTQLKAAVERLCHPCPWEWTFFQGNCYFMSNSQRNW 277
Query: 161 ADAQLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMR 220
D+ +C+ G L + K A + ++G++DL +EG + + D SP+
Sbjct: 278 HDSITACKEVGAQLVVIKS-------AEEQSSRSNRFTWMGLSDLNQEGTWQWVDGSPLL 330
Query: 221 TFNK--WRSGEPNNAYDEEDCVEMVASGGWNDVACHTTMYFMCE 262
K W GEPNN EEDC E + GWND C+ +++C+
Sbjct: 331 PSFKQYWNRGEPNNV-GEEDCAEF-SGNGWNDDKCNLAKFWICK 372
>gi|118600983 chondroitin sulfate proteoglycan 3 [Homo sapiens]
Length = 1321
Score = 60.8 bits (146), Expect = 1e-09
Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 8/124 (6%)
Query: 142 GVRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIG 201
G + + Y + + DA+ C+ R G L+ + + ++ G +IG
Sbjct: 1091 GWHKFQGHCYRYFAHRRAWEDAEKDCRRRSGHLTSVHSPEEHSFINSF----GHENTWIG 1146
Query: 202 INDLEKEGAFVYSDHSPMRTFNKWRSGEPNNAY-DEEDCVEMVA--SGGWNDVACHTTMY 258
+ND E F ++D++ ++ F WR +P+N + EDCV MVA SG WNDV C+ +
Sbjct: 1147 LNDRIVERDFQWTDNTGLQ-FENWRENQPDNFFAGGEDCVVMVAHESGRWNDVPCNYNLP 1205
Query: 259 FMCE 262
++C+
Sbjct: 1206 YVCK 1209
>gi|4506803 stem cell growth factor precursor [Homo sapiens]
Length = 323
Score = 60.1 bits (144), Expect = 2e-09
Identities = 51/206 (24%), Positives = 81/206 (39%), Gaps = 50/206 (24%)
Query: 107 GLPCECSQLRKAIGEMDNQVSQLTSELKFIKNAVAGVRETES------------------ 148
GL QL + +D +V +LT L+ ++NA R+
Sbjct: 117 GLDAGLHQLHVRLHALDTRVVELTQGLRQLRNAAGDTRDAVQALQEAQGRAEREHGRLEG 176
Query: 149 ---------KIYLLVKEEKRYADAQLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLA--- 196
K +LL ++ + A AQ C RGG+L+ P D + YL +A LA
Sbjct: 177 CLKGLRLGHKCFLLSRDFEAQAAAQARCTARGGSLAQPADRQQMEALTRYL-RAALAPYN 235
Query: 197 -RVFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPN-----------------NAYDEED 238
V++G++D EG +++ + + F RS P N E+
Sbjct: 236 WPVWLGVHDRRAEGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNGGTLEN 295
Query: 239 CVEMVA-SGGWNDVACHTTMYFMCEF 263
CV + G W D C +Y++CEF
Sbjct: 296 CVAQASDDGSWWDHDCQRRLYYVCEF 321
>gi|110735435 collagen, type V, alpha 3 preproprotein [Homo sapiens]
Length = 1745
Score = 59.7 bits (143), Expect = 3e-09
Identities = 29/51 (56%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDS---GDIGPPGPNGEPGLP 109
G +GD G KG+KG +G G IGP G GEKGD G GPPGP G+PG P
Sbjct: 1391 GLKGDTGPKGEKGHIGLIGLIGPPGEAGEKGDQGLPGVQGPPGPKGDPGPP 1441
Score = 53.9 bits (128), Expect = 1e-07
Identities = 25/48 (52%), Positives = 28/48 (58%)
Query: 60 EMGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
E G +GD GD G G+ G G G IG KG+ G SG GPPG G PG
Sbjct: 1203 EKGERGDAGDPGPPGAPGIPGPKGDIGEKGDSGPSGAAGPPGKKGPPG 1250
Score = 53.5 bits (127), Expect = 2e-07
Identities = 23/48 (47%), Positives = 30/48 (62%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLP 109
G +G G G +G+ G G +G G+ GEKG+ GD G PGP G PG+P
Sbjct: 1175 GPRGPQGPTGSEGTPGLPGGVGQPGAVGEKGERGDAGDPGPPGAPGIP 1222
Score = 53.5 bits (127), Expect = 2e-07
Identities = 39/107 (36%), Positives = 45/107 (42%), Gaps = 7/107 (6%)
Query: 10 SLASKGMRERRETKAPPDGLEESAPR----EKKQSQPVVTASDISKRKCTSSFVEMGSQG 65
++ KG R PP P+ EK S P A K+ GS G
Sbjct: 1200 AVGEKGERGDAGDPGPPGAPGIPGPKGDIGEKGDSGPSGAAGPPGKKGPPGEDGAKGSVG 1259
Query: 66 DMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDI---GPPGPNGEPGLP 109
G G G G G G GS GEKGD GD+ GPPG +GEPG P
Sbjct: 1260 PTGLPGDLGPPGDPGVSGIDGSPGEKGDPGDVGGPGPPGASGEPGAP 1306
Score = 53.1 bits (126), Expect = 2e-07
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLP 109
G +G +G G G G+ G GP+G G+KG G+ GPPGP G+ G+P
Sbjct: 1010 GERGPLGPAGGIGLPGQSGSEGPVGPAGKKGSRGERGPPGPTGKDGIP 1057
Score = 52.8 bits (125), Expect = 3e-07
Identities = 24/46 (52%), Positives = 29/46 (63%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
G QG G +G G G G+ G +G KGE+GD+GD GPPG G PG
Sbjct: 1178 GPQGPTGSEGTPGLPGGVGQPGAVGEKGERGDAGDPGPPGAPGIPG 1223
Score = 52.0 bits (123), Expect = 5e-07
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
G +G++G +GQ G G G +GP G GE G G+ GPPGP G PG
Sbjct: 899 GQRGELGFQGQTGPPGPAGVLGPQGKTGEVGPLGERGPPGPPGPPG 944
Score = 52.0 bits (123), Expect = 5e-07
Identities = 24/49 (48%), Positives = 28/49 (57%)
Query: 60 EMGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGL 108
E+G QG G G G +G GK G +G GE+G G GPPG G PGL
Sbjct: 903 ELGFQGQTGPPGPAGVLGPQGKTGEVGPLGERGPPGPPGPPGEQGLPGL 951
Score = 51.6 bits (122), Expect = 7e-07
Identities = 29/65 (44%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Query: 62 GSQGDMGDKGQKGSVGRHGK---IGPIGSKGEKGDSG------DIGPPGPNGEPGLPCEC 112
G +GD G G GS+G G GP+G KG KG G D GP GP G PG P E
Sbjct: 1433 GPKGDPGPPGPIGSLGHPGPPGVAGPLGQKGSKGSPGSMGPRGDTGPAGPPGPPGAPAEL 1492
Query: 113 SQLRK 117
LR+
Sbjct: 1493 HGLRR 1497
Score = 50.1 bits (118), Expect = 2e-06
Identities = 25/51 (49%), Positives = 29/51 (56%)
Query: 61 MGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLPCE 111
+G +G+ GD G G G G GP G GEKGDSG G GP G+ G P E
Sbjct: 1201 VGEKGERGDAGDPGPPGAPGIPGPKGDIGEKGDSGPSGAAGPPGKKGPPGE 1251
Score = 49.7 bits (117), Expect = 3e-06
Identities = 34/96 (35%), Positives = 44/96 (45%), Gaps = 15/96 (15%)
Query: 29 LEESAPREKKQSQ-----PVVTASDISKRKCTSSFVEMGSQGDMGD-----KGQK----- 73
LE A RE ++ P A++ R F G +G G+ KGQ+
Sbjct: 335 LETKAAREDEEGDDSTMGPDFRAAEYPSRTQFQIFPGAGEKGAKGEPAVIEKGQQFEGPP 394
Query: 74 GSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLP 109
G+ G G +GP G G G GD GPPGP G PG+P
Sbjct: 395 GAPGPQGVVGPSGPPGPPGFPGDPGPPGPAGLPGIP 430
Score = 49.7 bits (117), Expect = 3e-06
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGE------PGLP 109
G G GD+G+ G+ G G+ GP G KG+ G +G+ GPPG GE PGLP
Sbjct: 740 GDVGLKGDQGKPGAPGPRGEDGPEGPKGQAGQAGEEGPPGSAGEKGKLGVPGLP 793
Score = 49.7 bits (117), Expect = 3e-06
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 61 MGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGE------PGLPCE 111
+G G+ G G+ G G G+ GP GS+GE+G G G PGP G+ PG+P E
Sbjct: 811 LGPIGEKGKSGKTGQPGLEGERGPPGSRGERGQPGATGQPGPKGDVGQDGAPGIPGE 867
Score = 49.3 bits (116), Expect = 4e-06
Identities = 23/48 (47%), Positives = 28/48 (58%)
Query: 60 EMGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
E G +GD+G G KGS G G GP G G +G +G GPPG +G G
Sbjct: 1074 EEGDKGDVGAPGHKGSKGDKGDAGPPGQPGIRGPAGHPGPPGADGAQG 1121
Score = 48.9 bits (115), Expect = 5e-06
Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 60 EMGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPP---GPNGEPG 107
+ GS+G +G G+KGS G G GP G G G G +GPP GP+GE G
Sbjct: 1026 QSGSEGPVGPAGKKGSRGERGPPGPTGKDGIPGPLGPLGPPGAAGPSGEEG 1076
Score = 48.5 bits (114), Expect = 6e-06
Identities = 23/46 (50%), Positives = 27/46 (58%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
G G G+KGQ+G G G+ GP G GE+G G GP G GEPG
Sbjct: 554 GLPGLPGEKGQRGDFGHVGQPGPPGEDGERGAEGPPGPTGQAGEPG 599
Score = 48.5 bits (114), Expect = 6e-06
Identities = 25/55 (45%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 61 MGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPP------GPNGEPGLP 109
+G G G G G G G +G G KG KGD GD GPP GP G PG P
Sbjct: 1060 LGPLGPPGAAGPSGEEGDKGDVGAPGHKGSKGDKGDAGPPGQPGIRGPAGHPGPP 1114
Score = 48.1 bits (113), Expect = 8e-06
Identities = 23/46 (50%), Positives = 28/46 (60%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
G++G GD G KG G G G G KG++GD G +G PGP GE G
Sbjct: 536 GARGLPGDTGPKGDRGFDGLPGLPGEKGQRGDFGHVGQPGPPGEDG 581
Score = 47.8 bits (112), Expect = 1e-05
Identities = 25/54 (46%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDS------GDIGPPGPNGEPGLP 109
G G G G KGS+G G +GPIG KG+ G + G+ GPPG GE G P
Sbjct: 791 GLPGYPGRPGPKGSIGFPGPLGPIGEKGKSGKTGQPGLEGERGPPGSRGERGQP 844
Score = 47.8 bits (112), Expect = 1e-05
Identities = 25/54 (46%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 61 MGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGP------PGPNGEPGL 108
MG +G G+KG KG G G G G G +G G +GP PGP GEPGL
Sbjct: 1318 MGREGREGEKGAKGEPGPDGPPGRTGPMGARGPPGRVGPEGLRGIPGPVGEPGL 1371
Score = 47.0 bits (110), Expect = 2e-05
Identities = 23/46 (50%), Positives = 28/46 (60%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
G +G+ G +G KG G+ G+ GP GS GEKG G G PG G PG
Sbjct: 755 GPRGEDGPEGPKGQAGQAGEEGPPGSAGEKGKLGVPGLPGYPGRPG 800
Score = 46.6 bits (109), Expect = 2e-05
Identities = 21/50 (42%), Positives = 27/50 (54%)
Query: 60 EMGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLP 109
E G G G++GQ G+ G+ G G +G G G G+ G PG G PG P
Sbjct: 831 ERGPPGSRGERGQPGATGQPGPKGDVGQDGAPGIPGEKGLPGLQGPPGFP 880
Score = 46.2 bits (108), Expect = 3e-05
Identities = 23/48 (47%), Positives = 26/48 (54%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLP 109
G G G++G GS G G+ G G G KGD G G PG GE GLP
Sbjct: 824 GQPGLEGERGPPGSRGERGQPGATGQPGPKGDVGQDGAPGIPGEKGLP 871
Score = 46.2 bits (108), Expect = 3e-05
Identities = 22/46 (47%), Positives = 28/46 (60%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
G +GD G +G G +G G G G GEKG+ GD+G GP+G PG
Sbjct: 1130 GQKGDDGVRGFVGVIGPPGLQGLPGPPGEKGEVGDVGSMGPHGAPG 1175
Score = 45.8 bits (107), Expect = 4e-05
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGL 108
G G +G G G G G G +G+ G KG GD G GP G+PG+
Sbjct: 1058 GPLGPLGPPGAAGPSGEEGDKGDVGAPGHKGSKGDKGDAGPPGQPGI 1104
Score = 45.8 bits (107), Expect = 4e-05
Identities = 22/48 (45%), Positives = 26/48 (54%)
Query: 60 EMGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
E G GD+G G G+ G G GP GS+G G G +G PG GE G
Sbjct: 1158 EKGEVGDVGSMGPHGAPGPRGPQGPTGSEGTPGLPGGVGQPGAVGEKG 1205
Score = 45.8 bits (107), Expect = 4e-05
Identities = 22/48 (45%), Positives = 25/48 (52%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLP 109
G G G G+ G G G GP+G G G G +GPPGP G GLP
Sbjct: 1343 GPMGARGPPGRVGPEGLRGIPGPVGEPGLLGAPGQMGPPGPLGPSGLP 1390
Score = 45.4 bits (106), Expect = 5e-05
Identities = 23/48 (47%), Positives = 27/48 (56%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLP 109
G QG G +G G GR GK+G G+ G +G GD GP G G GLP
Sbjct: 509 GPQGPRGLQGPHGPPGRVGKMGRPGADGARGLPGDTGPKGDRGFDGLP 556
Score = 45.4 bits (106), Expect = 5e-05
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGS------KGEKGDSGDIGPPGPNGEPG 107
GS+G+ G G G G G +GP+G GE+GD GD+G PG G G
Sbjct: 1040 GSRGERGPPGPTGKDGIPGPLGPLGPPGAAGPSGEEGDKGDVGAPGHKGSKG 1091
Score = 45.1 bits (105), Expect = 7e-05
Identities = 25/58 (43%), Positives = 29/58 (50%), Gaps = 9/58 (15%)
Query: 60 EMGSQGDMGDKGQKGSVGRHGKIG------PIGSKGEKGDSGDIGP---PGPNGEPGL 108
E G +GD G GQ G G G+ G P G GE G G +GP PGP G PG+
Sbjct: 561 EKGQRGDFGHVGQPGPPGEDGERGAEGPPGPTGQAGEPGPRGLLGPRGSPGPTGRPGV 618
Score = 45.1 bits (105), Expect = 7e-05
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 9/57 (15%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDI---------GPPGPNGEPGLP 109
G G G +G+ G G+ G GP G G +G +G++ GPPGP GE GLP
Sbjct: 893 GRPGHPGQRGELGFQGQTGPPGPAGVLGPQGKTGEVGPLGERGPPGPPGPPGEQGLP 949
Score = 44.7 bits (104), Expect = 9e-05
Identities = 22/48 (45%), Positives = 26/48 (54%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLP 109
G+ G G+ G G G HG G G +G G G+ GPPG G PGLP
Sbjct: 629 GNVGPPGEPGPPGQQGNHGSQGLPGPQGLIGTPGEKGPPGNPGIPGLP 676
Score = 44.7 bits (104), Expect = 9e-05
Identities = 22/46 (47%), Positives = 26/46 (56%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
G+ G+ G +G+KG G G G G G KGD G G PGP GE G
Sbjct: 716 GTSGNRGLQGEKGEKGEDGFPGFKGDVGLKGDQGKPGAPGPRGEDG 761
Score = 44.7 bits (104), Expect = 9e-05
Identities = 22/50 (44%), Positives = 27/50 (54%)
Query: 60 EMGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLP 109
E G+ G G +G G +GR G+ G G+KGE G G G GP G G P
Sbjct: 1302 EPGAPGPPGKRGPSGHMGREGREGEKGAKGEPGPDGPPGRTGPMGARGPP 1351
Score = 44.3 bits (103), Expect = 1e-04
Identities = 21/46 (45%), Positives = 24/46 (52%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
G +G G G GS G G +GP G G G SG GP GP G+ G
Sbjct: 995 GDKGPPGPVGANGSPGERGPLGPAGGIGLPGQSGSEGPVGPAGKKG 1040
Score = 44.3 bits (103), Expect = 1e-04
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
G G G+ G G G+ G G +G +G +G+ G G PGP+G PG
Sbjct: 1295 GPPGASGEPGAPGPPGKRGPSGHMGREGREGEKGAKGEPGPDGPPG 1340
Score = 43.9 bits (102), Expect = 1e-04
Identities = 23/48 (47%), Positives = 24/48 (50%)
Query: 60 EMGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
E G G G G KG VG+ G G G KG G G G PGP G PG
Sbjct: 840 ERGQPGATGQPGPKGDVGQDGAPGIPGEKGLPGLQGPPGFPGPKGPPG 887
Score = 43.9 bits (102), Expect = 1e-04
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
G G +G++G G G G+ G G +G +G G++GPPGP G+ G
Sbjct: 926 GEVGPLGERGPPGPPGPPGEQGLPGLEGREGAKGELGPPGPLGKEG 971
Score = 43.9 bits (102), Expect = 1e-04
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLP 109
G G+ G G +G G G++GP G G++G +G G PGP G PG P
Sbjct: 941 GPPGEQGLPGLEGREGAKGELGPPGPLGKEGPAGLRGFPGPKGGPGDP 988
Score = 43.9 bits (102), Expect = 1e-04
Identities = 26/61 (42%), Positives = 29/61 (47%)
Query: 60 EMGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLPCECSQLRKAI 119
E+G G +G +G G G G G G G G GD GPPGP G G P E L A
Sbjct: 960 ELGPPGPLGKEGPAGLRGFPGPKGGPGDPGPTGLKGDKGPPGPVGANGSPGERGPLGPAG 1019
Query: 120 G 120
G
Sbjct: 1020 G 1020
Score = 43.9 bits (102), Expect = 1e-04
Identities = 20/46 (43%), Positives = 25/46 (54%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
G +G GD G G G G GP+G+ G G+ G +GP G G PG
Sbjct: 980 GPKGGPGDPGPTGLKGDKGPPGPVGANGSPGERGPLGPAGGIGLPG 1025
Score = 43.9 bits (102), Expect = 1e-04
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 60 EMGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
++G GD G G GS G G G +G G G SG+ G PGP G+ G
Sbjct: 1266 DLGPPGDPGVSGIDGSPGEKGDPGDVGGPGPPGASGEPGAPGPPGKRG 1313
Score = 43.5 bits (101), Expect = 2e-04
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 60 EMGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
E G +G +G +G G GR G G G+ G KG+ G G PGP G+ G
Sbjct: 597 EPGPRGLLGPRGSPGPTGRPGVTGIDGAPGAKGNVGPPGEPGPPGQQG 644
Score = 43.1 bits (100), Expect = 3e-04
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 61 MGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIG---PPGPNGEPGLP 109
+G+ G+ G G G G G GP+G G +G +G+ G PPG G PG P
Sbjct: 658 IGTPGEKGPPGNPGIPGLPGSDGPLGHPGHEGPTGEKGAQGPPGSAGPPGYP 709
Score = 43.1 bits (100), Expect = 3e-04
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 61 MGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
+G G +G G+KG G+ G+ G G +G G G+ G PG G+PG
Sbjct: 805 IGFPGPLGPIGEKGKSGKTGQPGLEGERGPPGSRGERGQPGATGQPG 851
Score = 42.7 bits (99), Expect = 3e-04
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 12/60 (20%)
Query: 60 EMGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGD------------SGDIGPPGPNGEPG 107
E G++G G GQ G G G +GP GS G G G++GPPG G PG
Sbjct: 582 ERGAEGPPGPTGQAGEPGPRGLLGPRGSPGPTGRPGVTGIDGAPGAKGNVGPPGEPGPPG 641
Score = 42.4 bits (98), Expect = 4e-04
Identities = 21/46 (45%), Positives = 24/46 (52%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
G G G KG G G+ G+ G G +GE G G GPPGP G G
Sbjct: 875 GPPGFPGPKGPPGHQGKDGRPGHPGQRGELGFQGQTGPPGPAGVLG 920
Score = 42.4 bits (98), Expect = 4e-04
Identities = 24/53 (45%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 58 FVEMGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGP---PGPNGEPG 107
F + G G G G G G G GP G KGE GD G +GP PGP G G
Sbjct: 1129 FGQKGDDGVRGFVGVIGPPGLQGLPGPPGEKGEVGDVGSMGPHGAPGPRGPQG 1181
Score = 42.4 bits (98), Expect = 4e-04
Identities = 20/46 (43%), Positives = 25/46 (54%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
G+ G+ G G G G G +G G +GEKG G+ GP GP G G
Sbjct: 1298 GASGEPGAPGPPGKRGPSGHMGREGREGEKGAKGEPGPDGPPGRTG 1343
Score = 42.4 bits (98), Expect = 4e-04
Identities = 23/47 (48%), Positives = 25/47 (53%)
Query: 61 MGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
+G+ G MG G G G G G G KGEKG G IG GP GE G
Sbjct: 1372 LGAPGQMGPPGPLGPSGLPGLKGDTGPKGEKGHIGLIGLIGPPGEAG 1418
Score = 42.0 bits (97), Expect = 6e-04
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGL 108
G +G+ G G +G G+ G G G KG+ G G G PG G PGL
Sbjct: 827 GLEGERGPPGSRGERGQPGATGQPGPKGDVGQDGAPGIPGEKGLPGL 873
Score = 42.0 bits (97), Expect = 6e-04
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 61 MGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLP 109
+G G G +G G G G++G +GS G G G GP GP G G P
Sbjct: 1141 VGVIGPPGLQGLPGPPGEKGEVGDVGSMGPHGAPGPRGPQGPTGSEGTP 1189
Score = 41.6 bits (96), Expect = 7e-04
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLP 109
G++G++G G+ G G+ G G G G +G G G GP G PG+P
Sbjct: 626 GAKGNVGPPGEPGPPGQQGNHGSQGLPGPQGLIGTPGEKGPPGNPGIP 673
Score = 41.6 bits (96), Expect = 7e-04
Identities = 23/54 (42%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSG------DIGPPGPNGEPGLP 109
GS G G G +G G G G G KGEKG+ G D+G G G+PG P
Sbjct: 701 GSAGPPGYPGPRGVKGTSGNRGLQGEKGEKGEDGFPGFKGDVGLKGDQGKPGAP 754
Score = 41.6 bits (96), Expect = 7e-04
Identities = 20/48 (41%), Positives = 25/48 (52%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLP 109
G +G G+ G G +G+ G G G G KG GD GP G G+ G P
Sbjct: 953 GREGAKGELGPPGPLGKEGPAGLRGFPGPKGGPGDPGPTGLKGDKGPP 1000
Score = 41.6 bits (96), Expect = 7e-04
Identities = 28/71 (39%), Positives = 32/71 (45%), Gaps = 21/71 (29%)
Query: 62 GSQGDMGD---------------KGQKGSVGRHGKIGPIGSKGEKGDS------GDIGPP 100
GS+GD GD G G+ G G+ GP G G+KGD G IGPP
Sbjct: 1088 GSKGDKGDAGPPGQPGIRGPAGHPGPPGADGAQGRRGPPGLFGQKGDDGVRGFVGVIGPP 1147
Query: 101 GPNGEPGLPCE 111
G G PG P E
Sbjct: 1148 GLQGLPGPPGE 1158
Score = 41.6 bits (96), Expect = 7e-04
Identities = 20/46 (43%), Positives = 24/46 (52%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
G G G G++G G G+ G G KG KG+ G GPPG G G
Sbjct: 1301 GEPGAPGPPGKRGPSGHMGREGREGEKGAKGEPGPDGPPGRTGPMG 1346
Score = 41.2 bits (95), Expect = 0.001
Identities = 21/46 (45%), Positives = 24/46 (52%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
G +G G KG+ G G GK GP G +G G G G PGP G G
Sbjct: 950 GLEGREGAKGELGPPGPLGKEGPAGLRGFPGPKGGPGDPGPTGLKG 995
Score = 41.2 bits (95), Expect = 0.001
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGL 108
G G +G+ G G+ G+ G GP+G G G GD GP G G GL
Sbjct: 1361 GIPGPVGEPGLLGAPGQMGPPGPLGPSGLPGLKGDTGPKGEKGHIGL 1407
Score = 41.2 bits (95), Expect = 0.001
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 61 MGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGL 108
+G G G+ G+KG G G GP G KG+ G G IG G G PG+
Sbjct: 1408 IGLIGPPGEAGEKGDQGLPGVQGPPGPKGDPGPPGPIGSLGHPGPPGV 1455
Score = 40.8 bits (94), Expect = 0.001
Identities = 20/47 (42%), Positives = 24/47 (51%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGL 108
G+ G G G G +G G GP G KG +G G GPPG G G+
Sbjct: 668 GNPGIPGLPGSDGPLGHPGHEGPTGEKGAQGPPGSAGPPGYPGPRGV 714
Score = 40.8 bits (94), Expect = 0.001
Identities = 21/48 (43%), Positives = 24/48 (50%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLP 109
G G+ G +G GS G G GP G KG G+ G G G GE G P
Sbjct: 689 GPTGEKGAQGPPGSAGPPGYPGPRGVKGTSGNRGLQGEKGEKGEDGFP 736
Score = 40.8 bits (94), Expect = 0.001
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 60 EMGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
E G +G+ G G KG VG G G G+ G +G+ G GP G G+ G
Sbjct: 726 EKGEKGEDGFPGFKGDVGLKGDQGKPGAPGPRGEDGPEGPKGQAGQAG 773
Score = 40.8 bits (94), Expect = 0.001
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
G QG G +G++G+ G G GP+G +G G G GP G G+PG
Sbjct: 944 GEQGLPGLEGREGAKGELGPPGPLGKEGPAGLRGFPGPKGGPGDPG 989
Score = 40.4 bits (93), Expect = 0.002
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLP 109
G G+ G +G G G+ G+ GP G G +G G G PG G G P
Sbjct: 578 GEDGERGAEGPPGPTGQAGEPGPRGLLGPRGSPGPTGRPGVTGIDGAP 625
Score = 40.4 bits (93), Expect = 0.002
Identities = 21/48 (43%), Positives = 25/48 (52%)
Query: 60 EMGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
+ G +G G G+KG +G G G G G KG G GP GP GE G
Sbjct: 771 QAGEEGPPGSAGEKGKLGVPGLPGYPGRPGPKGSIGFPGPLGPIGEKG 818
Score = 40.4 bits (93), Expect = 0.002
Identities = 21/48 (43%), Positives = 25/48 (52%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLP 109
G G GD GQ G+ G G+ G G +G G G GPPG G+ G P
Sbjct: 848 GQPGPKGDVGQDGAPGIPGEKGLPGLQGPPGFPGPKGPPGHQGKDGRP 895
Score = 40.4 bits (93), Expect = 0.002
Identities = 21/48 (43%), Positives = 22/48 (45%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLP 109
G G G G G G G GP G G G G+ GP GP G GLP
Sbjct: 977 GFPGPKGGPGDPGPTGLKGDKGPPGPVGANGSPGERGPLGPAGGIGLP 1024
Score = 40.4 bits (93), Expect = 0.002
Identities = 24/59 (40%), Positives = 27/59 (45%), Gaps = 9/59 (15%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKG---------DSGDIGPPGPNGEPGLPCE 111
G G+ GD G G+ G GK GP G G KG D G G PG +G G P E
Sbjct: 1226 GDIGEKGDSGPSGAAGPPGKKGPPGEDGAKGSVGPTGLPGDLGPPGDPGVSGIDGSPGE 1284
Score = 40.0 bits (92), Expect = 0.002
Identities = 21/48 (43%), Positives = 25/48 (52%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLP 109
G+ G G+ G G G G+ G GS+G G G IG PG G PG P
Sbjct: 623 GAPGAKGNVGPPGEPGPPGQQGNHGSQGLPGPQGLIGTPGEKGPPGNP 670
Score = 40.0 bits (92), Expect = 0.002
Identities = 24/71 (33%), Positives = 31/71 (43%)
Query: 39 QSQPVVTASDISKRKCTSSFVEMGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIG 98
Q+ P A + + T +G +G G G G G G G G+KGE G G +G
Sbjct: 909 QTGPPGPAGVLGPQGKTGEVGPLGERGPPGPPGPPGEQGLPGLEGREGAKGELGPPGPLG 968
Query: 99 PPGPNGEPGLP 109
GP G G P
Sbjct: 969 KEGPAGLRGFP 979
Score = 39.7 bits (91), Expect = 0.003
Identities = 21/50 (42%), Positives = 25/50 (50%)
Query: 60 EMGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLP 109
E G G G+ G +G G G IG G KG G+ G G PG +G G P
Sbjct: 636 EPGPPGQQGNHGSQGLPGPQGLIGTPGEKGPPGNPGIPGLPGSDGPLGHP 685
Score = 39.7 bits (91), Expect = 0.003
Identities = 20/49 (40%), Positives = 24/49 (48%)
Query: 60 EMGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGL 108
++G+ G G KG KG G G+ G G G G G G G G PGL
Sbjct: 1080 DVGAPGHKGSKGDKGDAGPPGQPGIRGPAGHPGPPGADGAQGRRGPPGL 1128
Score = 39.3 bits (90), Expect = 0.004
Identities = 20/46 (43%), Positives = 25/46 (54%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
G +G G+KG +G G G G G +G KG SG+ G G GE G
Sbjct: 686 GHEGPTGEKGAQGPPGSAGPPGYPGPRGVKGTSGNRGLQGEKGEKG 731
Score = 39.3 bits (90), Expect = 0.004
Identities = 22/50 (44%), Positives = 23/50 (46%)
Query: 60 EMGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLP 109
E G G G KG G G GK G G +GE G G G G GE G P
Sbjct: 729 EKGEDGFPGFKGDVGLKGDQGKPGAPGPRGEDGPEGPKGQAGQAGEEGPP 778
Score = 38.9 bits (89), Expect = 0.005
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 60 EMGSQGDMGDKGQKGSVGRHGKIGPIGSKG---EKGDSGDIGPPGPNGEPGL 108
E G+QG G G G G G G G++G EKG+ G+ G PG G+ GL
Sbjct: 693 EKGAQGPPGSAGPPGYPGPRGVKGTSGNRGLQGEKGEKGEDGFPGFKGDVGL 744
Score = 38.9 bits (89), Expect = 0.005
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
G G G G+ G G+ G++G G G G +G +GP G GE G
Sbjct: 884 GPPGHQGKDGRPGHPGQRGELGFQGQTGPPGPAGVLGPQGKTGEVG 929
Score = 38.9 bits (89), Expect = 0.005
Identities = 20/46 (43%), Positives = 23/46 (50%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
G G G G+KG G G GP G+ G G GDIG G +G G
Sbjct: 1193 GGVGQPGAVGEKGERGDAGDPGPPGAPGIPGPKGDIGEKGDSGPSG 1238
Score = 38.9 bits (89), Expect = 0.005
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 12/58 (20%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGD------------IGPPGPNGEPG 107
G G+ G G G +G G +GP G G KGD+G IGPPG GE G
Sbjct: 1364 GPVGEPGLLGAPGQMGPPGPLGPSGLPGLKGDTGPKGEKGHIGLIGLIGPPGEAGEKG 1421
Score = 38.5 bits (88), Expect = 0.006
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 12/93 (12%)
Query: 23 KAPPDGLEESAPREKKQSQPVVTASDISKRK------CTSSFVEMGSQGDMGDKGQKGSV 76
K PP +++ Q+Q V+ + +S + T +G G G KG++G+
Sbjct: 455 KGPPVSFQQA------QAQAVLQQTQLSMKGPPGPVGLTGRPGPVGLPGHPGLKGEEGAE 508
Query: 77 GRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLP 109
G G G G G G G +G PG +G GLP
Sbjct: 509 GPQGPRGLQGPHGPPGRVGKMGRPGADGARGLP 541
Score = 38.1 bits (87), Expect = 0.008
Identities = 22/48 (45%), Positives = 23/48 (47%)
Query: 60 EMGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
E G G+ G G GS G G G G GEKG G G GP G PG
Sbjct: 663 EKGPPGNPGIPGLPGSDGPLGHPGHEGPTGEKGAQGPPGSAGPPGYPG 710
Score = 38.1 bits (87), Expect = 0.008
Identities = 20/46 (43%), Positives = 23/46 (50%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
G G G G+KG G G GP G+ GE G G G GP+G G
Sbjct: 1274 GVSGIDGSPGEKGDPGDVGGPGPPGASGEPGAPGPPGKRGPSGHMG 1319
Score = 37.0 bits (84), Expect = 0.018
Identities = 20/46 (43%), Positives = 23/46 (50%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
G+ G G+KG G G G GP G G +G G G PG GE G
Sbjct: 860 GAPGIPGEKGLPGLQGPPGFPGPKGPPGHQGKDGRPGHPGQRGELG 905
Score = 36.6 bits (83), Expect = 0.024
Identities = 19/46 (41%), Positives = 24/46 (52%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
G +G G G+ G +G G++GP G G G G G GP GE G
Sbjct: 1358 GLRGIPGPVGEPGLLGAPGQMGPPGPLGPSGLPGLKGDTGPKGEKG 1403
Score = 35.8 bits (81), Expect = 0.040
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 15/61 (24%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIG---------------PPGPNGEP 106
G +G G G G+ G G+ GP G G+KGD G G PPG GE
Sbjct: 1103 GIRGPAGHPGPPGADGAQGRRGPPGLFGQKGDDGVRGFVGVIGPPGLQGLPGPPGEKGEV 1162
Query: 107 G 107
G
Sbjct: 1163 G 1163
Score = 35.0 bits (79), Expect = 0.069
Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPP---GPNGEPG 107
GSQG G +G G+ G G G G G G G +G P GP GE G
Sbjct: 647 GSQGLPGPQGLIGTPGEKGPPGNPGIPGLPGSDGPLGHPGHEGPTGEKG 695
Score = 35.0 bits (79), Expect = 0.069
Identities = 19/48 (39%), Positives = 23/48 (47%)
Query: 60 EMGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPG 107
++G G G G+KG G G G G KG G G G PG G+ G
Sbjct: 855 DVGQDGAPGIPGEKGLPGLQGPPGFPGPKGPPGHQGKDGRPGHPGQRG 902
Score = 30.0 bits (66), Expect = 2.2
Identities = 17/40 (42%), Positives = 17/40 (42%)
Query: 62 GSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPG 101
G G G G G G G GP G G G G GPPG
Sbjct: 401 GVVGPSGPPGPPGFPGDPGPPGPAGLPGIPGIDGIRGPPG 440
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.130 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,424,733
Number of Sequences: 37866
Number of extensions: 547930
Number of successful extensions: 16720
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 95
Number of HSP's that attempted gapping in prelim test: 1815
Number of HSP's gapped (non-prelim): 9223
length of query: 268
length of database: 18,247,518
effective HSP length: 100
effective length of query: 168
effective length of database: 14,460,918
effective search space: 2429434224
effective search space used: 2429434224
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.