Guide to the Human Genome
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Name: MRRF Sequence: fasta or formatted (201aa) NCBI GI: 40317624
Description:

mitochondrial ribosome recycling factor isoform 2

Referenced in:

Ribosomes

Other entries for this name:
alt prot [262aa] mitochondrial ribosome recycling factor isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0         20           3
 C cysteine            1.0          2           1
 D aspartate           2.0          4           1
 E glutamate           6.0         12           2
 F phenylalanine       2.5          5           1
 G glycine             4.5          9           1
 H histidine           2.5          5           1
 I isoleucine          7.5         15           2
 K lysine              7.5         15           2
 L leucine             7.5         15           1
 M methionine          4.0          8           1
 N asparagine          6.5         13           1
 P proline             5.0         10           1
 Q glutamine           5.5         11           1
 R arginine            5.0         10           1
 S serine              6.5         13           1
 T threonine           6.0         12           1
 V valine              7.5         15           2
 W tryptophan          2.0          4           1
 Y tyrosine            1.5          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial ribosome recycling factor isoform 2 [H... 
MRRF                  0.888   mitochondrial ribosome recycling factor isoform 1 [H...
FBXO18                0.021   F-box only protein, helicase, 18 isoform 1 
FBXO18                0.021   F-box only protein, helicase, 18 isoform 2 
KIF4B                 0.013   kinesin family member 4B 
CENPQ                 0.011   centromere protein Q 
POLE                  0.008   DNA-directed DNA polymerase epsilon 
MACF1                 0.005   microfilament and actin filament cross-linker protei...
MACF1                 0.005   microfilament and actin filament cross-linker protei...
SPATC1                0.005   spermatogenesis and centriole associated 1 isoform ...
SPATC1                0.005   spermatogenesis and centriole associated 1 isoform ...
SHE                   0.005   Src homology 2 domain containing E 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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