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Search of human proteins with 40254986
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|40254986 hydroxysteroid dehydrogenase like 2 [Homo sapiens]
(418 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|40254986 hydroxysteroid dehydrogenase like 2 [Homo sapiens] 828 0.0
gi|10190704 2,4-dienoyl CoA reductase 2 [Homo sapiens] 74 3e-13
gi|4504505 hydroxysteroid (17-beta) dehydrogenase 4 [Homo sapiens] 72 1e-12
gi|209862901 dehydrogenase/reductase (SDR family) member 1 [Homo... 72 1e-12
gi|19923983 dehydrogenase/reductase (SDR family) member 1 [Homo ... 72 1e-12
gi|20149563 stomatin (EPB72)-like 1 [Homo sapiens] 68 2e-11
gi|19923233 sterol carrier protein 2 isoform 1 proprotein [Homo ... 67 3e-11
gi|55956779 sterol carrier protein 2 isoform 2 precursor [Homo s... 67 3e-11
gi|55956777 sterol carrier protein 2 isoform 1 precursor [Homo s... 67 3e-11
gi|25282469 retinol dehydrogenase 10 [Homo sapiens] 67 4e-11
gi|4503817 3-ketodihydrosphingosine reductase precursor [Homo sa... 67 4e-11
gi|19923817 peroxisomal trans-2-enoyl-CoA reductase [Homo sapiens] 66 7e-11
gi|59889578 dehydrogenase/reductase (SDR family) member 10 [Homo... 65 9e-11
gi|225579078 retinol dehydrogenase 13 isoform 1 [Homo sapiens] 65 1e-10
gi|31543615 dehydrogenase/reductase (SDR family) member 3 [Homo ... 64 3e-10
gi|5031737 dehydrogenase/reductase member 2 isoform 2 [Homo sapi... 64 3e-10
gi|33667109 dehydrogenase/reductase member 2 isoform 1 [Homo sap... 64 3e-10
gi|66933014 3-hydroxybutyrate dehydrogenase, type 2 [Homo sapiens] 64 3e-10
gi|223646115 short chain dehydrogenase/reductase family 16C, mem... 62 1e-09
gi|20149619 dehydrogenase/reductase (SDR family) member 7B [Homo... 62 1e-09
gi|109715829 short-chain dehydrogenase/reductase [Homo sapiens] 61 2e-09
gi|32483357 peroxisomal short-chain alcohol dehydrogenase [Homo ... 60 4e-09
gi|40807363 epidermal retinal dehydrogenase 2 [Homo sapiens] 60 4e-09
gi|7706318 dehydrogenase/reductase (SDR family) member 7 [Homo s... 59 6e-09
gi|142976729 estradiol 17-beta-dehydrogenase 11 [Homo sapiens] 59 1e-08
gi|210032110 hydroxysteroid (17-beta) dehydrogenase 13 isoform A... 57 4e-08
gi|30425406 hypothetical protein LOC140856 [Homo sapiens] 57 4e-08
gi|126723191 dehydrogenase/reductase (SDR family) member 4 like ... 56 5e-08
gi|7705925 dicarbonyl/L-xylulose reductase [Homo sapiens] 55 1e-07
gi|31542939 hydroxyprostaglandin dehydrogenase 15-(NAD) isoform ... 55 2e-07
>gi|40254986 hydroxysteroid dehydrogenase like 2 [Homo sapiens]
Length = 418
Score = 828 bits (2139), Expect = 0.0
Identities = 418/418 (100%), Positives = 418/418 (100%)
Query: 1 MLPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEE 60
MLPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEE
Sbjct: 1 MLPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEE 60
Query: 61 IEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDL 120
IEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDL
Sbjct: 61 IEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDL 120
Query: 121 MMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVL 180
MMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVL
Sbjct: 121 MMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVL 180
Query: 181 GMAEEFKGEIAVNALWPKTAIHTAAMDMLGGPGIESQCRKVDIIADAAYSIFQKPKSFTG 240
GMAEEFKGEIAVNALWPKTAIHTAAMDMLGGPGIESQCRKVDIIADAAYSIFQKPKSFTG
Sbjct: 181 GMAEEFKGEIAVNALWPKTAIHTAAMDMLGGPGIESQCRKVDIIADAAYSIFQKPKSFTG 240
Query: 241 NFVIDENILKEEGIENFDVYAIKPGHPLQPDFFLDEYPEAVSKKVESTGAVPEFKEEKLQ 300
NFVIDENILKEEGIENFDVYAIKPGHPLQPDFFLDEYPEAVSKKVESTGAVPEFKEEKLQ
Sbjct: 241 NFVIDENILKEEGIENFDVYAIKPGHPLQPDFFLDEYPEAVSKKVESTGAVPEFKEEKLQ 300
Query: 301 LQPKPRSGAVEETFRIVKDSLSDDVVKATQAIYLFELSGEDGGTWFLDLKSKGGNVGYGE 360
LQPKPRSGAVEETFRIVKDSLSDDVVKATQAIYLFELSGEDGGTWFLDLKSKGGNVGYGE
Sbjct: 301 LQPKPRSGAVEETFRIVKDSLSDDVVKATQAIYLFELSGEDGGTWFLDLKSKGGNVGYGE 360
Query: 361 PSDQADVVMSMTTDDFVKMFSGKLKPTMAFMSGKLKIKGNMALAIKLEKLMNQMNARL 418
PSDQADVVMSMTTDDFVKMFSGKLKPTMAFMSGKLKIKGNMALAIKLEKLMNQMNARL
Sbjct: 361 PSDQADVVMSMTTDDFVKMFSGKLKPTMAFMSGKLKIKGNMALAIKLEKLMNQMNARL 418
>gi|10190704 2,4-dienoyl CoA reductase 2 [Homo sapiens]
Length = 292
Score = 73.6 bits (179), Expect = 3e-13
Identities = 62/201 (30%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 14 FITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIE-AVGGKALPCI 72
FITG GIG IA + G + VIA+++ L + TAA ++ A G + LP
Sbjct: 32 FITGGGSGIGFRIAEIFMRHGCHTVIASRS-------LPRVLTAARKLAGATGRRCLPLS 84
Query: 73 VDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLA 132
+DVR + AAV++A+K+FG IDIL+N A+ L +M+++T GT+
Sbjct: 85 MDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNV 144
Query: 133 SKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFKGE-IA 191
S+ + I+NI+ L + H AK + +A E+ + I
Sbjct: 145 SRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAG--SAKAAVDAMTRHLAVEWGPQNIR 202
Query: 192 VNALWPKTAIHTAAMDMLGGP 212
VN+L P T + LGGP
Sbjct: 203 VNSLAPGPISGTEGLRRLGGP 223
>gi|4504505 hydroxysteroid (17-beta) dehydrogenase 4 [Homo sapiens]
Length = 736
Score = 71.6 bits (174), Expect = 1e-12
Identities = 51/183 (27%), Positives = 87/183 (47%), Gaps = 18/183 (9%)
Query: 245 DENILKEEGIENFDVYAIKPGHPLQPDFFLDEYPEAVSKKVESTGAVPEFKEEKLQLQPK 304
D ++ + + I+ + PG LQ + + + KV+ TG + + L P
Sbjct: 550 DNDVSRFKAIKARFAKPVYPGQTLQTEMWKEGNRIHFQTKVQETGDIV-ISNAYVDLAPT 608
Query: 305 PRSGA--------------VEETFRIVKDSLSDDVVKATQAIYLFELS--GEDGGTWFLD 348
+ A EE R +KD + +VVK A++ + ++ G G W +D
Sbjct: 609 SGTSAKTPSEGGKLQSTFVFEEIGRRLKD-IGPEVVKKVNAVFEWHITKGGNIGAKWTID 667
Query: 349 LKSKGGNVGYGEPSDQADVVMSMTTDDFVKMFSGKLKPTMAFMSGKLKIKGNMALAIKLE 408
LKS G V G AD + ++ +DF+++ GKL P AF SG+LK +GN+ L+ KL+
Sbjct: 668 LKSGSGKVYQGPAKGAADTTIILSDEDFMEVVLGKLDPQKAFFSGRLKARGNIMLSQKLQ 727
Query: 409 KLM 411
++
Sbjct: 728 MIL 730
Score = 63.9 bits (154), Expect = 3e-10
Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 16/198 (8%)
Query: 7 RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYT--AAEEIEAV 64
R G V +TGA G+G+A AL A+ GA +V+ G++ EEI
Sbjct: 6 RFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRR 65
Query: 65 GGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNV 124
GGKA+ V + +++ V+ A+ FG ID++VNNA + + + D++ V
Sbjct: 66 GGKAVANYDSVEEGEKV---VKTALDAFGRIDVVVNNAGILRDRSFARISDEDWDIIHRV 122
Query: 125 NTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMA- 183
+ RG++ ++A ++KK K I+ S + + + + Y+ AK G+ LG+A
Sbjct: 123 HLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQAN--YSAAKLGL----LGLAN 176
Query: 184 ----EEFKGEIAVNALWP 197
E K I N + P
Sbjct: 177 SLAIEGRKSNIHCNTIAP 194
>gi|209862901 dehydrogenase/reductase (SDR family) member 1 [Homo
sapiens]
Length = 313
Score = 71.6 bits (174), Expect = 1e-12
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 19/197 (9%)
Query: 10 GCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKAL 69
G +TGASRGIG+ IAL+ K GA + I + L T+ A+E +++GG+ +
Sbjct: 7 GQVCVVTGASRGIGRGIALQLCKAGATVYITGRH-------LDTLRVVAQEAQSLGGQCV 59
Query: 70 PCIVDVRDEQQISAAVEKAIK-KFGGIDILVNNASA--ISLTNT-----LDTPTKRLDLM 121
P + D E ++ + E+ + + G +D+LVNNA A ++ NT +TP D +
Sbjct: 60 PVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDI 119
Query: 122 MNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLG 181
NV RG Y S + + I+ IS P +L + + Y + K
Sbjct: 120 NNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQ---YMFNVPYGVGKAACDKLAAD 176
Query: 182 MAEEFKGE-IAVNALWP 197
A E + ++ +LWP
Sbjct: 177 CAHELRRHGVSCVSLWP 193
>gi|19923983 dehydrogenase/reductase (SDR family) member 1 [Homo
sapiens]
Length = 313
Score = 71.6 bits (174), Expect = 1e-12
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 19/197 (9%)
Query: 10 GCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKAL 69
G +TGASRGIG+ IAL+ K GA + I + L T+ A+E +++GG+ +
Sbjct: 7 GQVCVVTGASRGIGRGIALQLCKAGATVYITGRH-------LDTLRVVAQEAQSLGGQCV 59
Query: 70 PCIVDVRDEQQISAAVEKAIK-KFGGIDILVNNASA--ISLTNT-----LDTPTKRLDLM 121
P + D E ++ + E+ + + G +D+LVNNA A ++ NT +TP D +
Sbjct: 60 PVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDI 119
Query: 122 MNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLG 181
NV RG Y S + + I+ IS P +L + + Y + K
Sbjct: 120 NNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQ---YMFNVPYGVGKAACDKLAAD 176
Query: 182 MAEEFKGE-IAVNALWP 197
A E + ++ +LWP
Sbjct: 177 CAHELRRHGVSCVSLWP 193
>gi|20149563 stomatin (EPB72)-like 1 [Homo sapiens]
Length = 398
Score = 67.8 bits (164), Expect = 2e-11
Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 305 PRSGAVEETFRIVKDSLSDDVVKATQAIYLFELSGEDG--GTWFLDLKSKGGNVGYGEPS 362
P+ E ++ LS+ +V A Y F + G +FLDL + G VG+G P
Sbjct: 286 PKQPLAEGLLTALQPFLSEALVSQVGACYQFNVVLPSGTQSAYFLDLTTGRGRVGHGVPD 345
Query: 363 DQADVVMSMTTDDFVKMFSGKLKPTMAFMSGKLKIKGNMALAIKLEKLMNQM 414
DVV+ M D + +L+P A+MSG+LK+KG++A+A+KLE ++ +
Sbjct: 346 GIPDVVVEMAEADLRALLCRELRPLGAYMSGRLKVKGDLAMAMKLEAVLRAL 397
>gi|19923233 sterol carrier protein 2 isoform 1 proprotein [Homo
sapiens]
Length = 547
Score = 67.0 bits (162), Expect = 3e-11
Identities = 45/131 (34%), Positives = 70/131 (53%), Gaps = 13/131 (9%)
Query: 300 QLQPKPRSGAVEE-----TFRIVKDSLSDD---VVKATQAIYLFELSGEDGG---TWFLD 348
Q++ P S A + F+ ++ L ++ VK I+ F++ GG TW +D
Sbjct: 418 QIEAVPTSSASDGFKANLVFKEIEKKLEEEGEQFVKKIGGIFAFKVKDGPGGKEATWVVD 477
Query: 349 LKSKGGNVGYGEPSDQADVVMSMTTDDFVKMFSGKLKPTMAFMSGKLKIKGNMALAIKLE 408
+K+ G+V +AD ++M DF+ + +GK+ P AF GKLKI GNM LA+KL+
Sbjct: 478 VKNGKGSV-LPNSDKKADCTITMADSDFLALMTGKMNPQSAFFQGKLKITGNMGLAMKLQ 536
Query: 409 KLMNQM-NARL 418
L Q NA+L
Sbjct: 537 NLQLQPGNAKL 547
>gi|55956779 sterol carrier protein 2 isoform 2 precursor [Homo
sapiens]
Length = 140
Score = 67.0 bits (162), Expect = 3e-11
Identities = 45/131 (34%), Positives = 70/131 (53%), Gaps = 13/131 (9%)
Query: 300 QLQPKPRSGAVEE-----TFRIVKDSLSDD---VVKATQAIYLFELSGEDGG---TWFLD 348
Q++ P S A + F+ ++ L ++ VK I+ F++ GG TW +D
Sbjct: 11 QIEAVPTSSASDGFKANLVFKEIEKKLEEEGEQFVKKIGGIFAFKVKDGPGGKEATWVVD 70
Query: 349 LKSKGGNVGYGEPSDQADVVMSMTTDDFVKMFSGKLKPTMAFMSGKLKIKGNMALAIKLE 408
+K+ G+V +AD ++M DF+ + +GK+ P AF GKLKI GNM LA+KL+
Sbjct: 71 VKNGKGSV-LPNSDKKADCTITMADSDFLALMTGKMNPQSAFFQGKLKITGNMGLAMKLQ 129
Query: 409 KLMNQM-NARL 418
L Q NA+L
Sbjct: 130 NLQLQPGNAKL 140
>gi|55956777 sterol carrier protein 2 isoform 1 precursor [Homo
sapiens]
Length = 143
Score = 67.0 bits (162), Expect = 3e-11
Identities = 45/131 (34%), Positives = 70/131 (53%), Gaps = 13/131 (9%)
Query: 300 QLQPKPRSGAVEE-----TFRIVKDSLSDD---VVKATQAIYLFELSGEDGG---TWFLD 348
Q++ P S A + F+ ++ L ++ VK I+ F++ GG TW +D
Sbjct: 14 QIEAVPTSSASDGFKANLVFKEIEKKLEEEGEQFVKKIGGIFAFKVKDGPGGKEATWVVD 73
Query: 349 LKSKGGNVGYGEPSDQADVVMSMTTDDFVKMFSGKLKPTMAFMSGKLKIKGNMALAIKLE 408
+K+ G+V +AD ++M DF+ + +GK+ P AF GKLKI GNM LA+KL+
Sbjct: 74 VKNGKGSV-LPNSDKKADCTITMADSDFLALMTGKMNPQSAFFQGKLKITGNMGLAMKLQ 132
Query: 409 KLMNQM-NARL 418
L Q NA+L
Sbjct: 133 NLQLQPGNAKL 143
>gi|25282469 retinol dehydrogenase 10 [Homo sapiens]
Length = 341
Score = 66.6 bits (161), Expect = 4e-11
Identities = 49/204 (24%), Positives = 90/204 (44%), Gaps = 22/204 (10%)
Query: 3 PNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIE 62
P +AG ITGA G+G+ AL+ A+ A +V+ Q + + G + ++E
Sbjct: 29 PKEKSVAGQVCLITGAGSGLGRLFALEFARRRALLVLWDINTQSNEETAGMVRHIYRDLE 88
Query: 63 AVGGKALPC------------------IVDVRDEQQISAAVEKAIKKFGGIDILVNNASA 104
A AL DV + + E+ K+ G + +LVNNA
Sbjct: 89 AADAAALQAGNGEEEILPHCNLQVFTYTCDVGKRENVYLTAERVRKEVGEVSVLVNNAGV 148
Query: 105 ISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNL-NPVWFK 163
+S + L+ P + ++ M VN + +KA +P + + HI+ ++ L L + +
Sbjct: 149 VSGHHLLECPDELIERTMMVNCHAHFWTTKAFLPTMLEINHGHIVTVASSLGLFSTAGVE 208
Query: 164 QHCAYTIAKYGMSMYVLGMAEEFK 187
+CA +K+G+ + ++ E K
Sbjct: 209 DYCA---SKFGVVGFHESLSHELK 229
>gi|4503817 3-ketodihydrosphingosine reductase precursor [Homo
sapiens]
Length = 332
Score = 66.6 bits (161), Expect = 4e-11
Identities = 55/193 (28%), Positives = 92/193 (47%), Gaps = 18/193 (9%)
Query: 3 PNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIE 62
P L G V +TG S GIGK IA++ K GA I + A+ KLL A +EIE
Sbjct: 25 PKPLALPGAHVVVTGGSSGIGKCIAIECYKQGAFITLVARNED---KLL----QAKKEIE 77
Query: 63 --AVGGKALPCIVDV---RDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKR 117
++ K + + V +D Q+ +++A +K G +D+LVN A D
Sbjct: 78 MHSINDKQVVLCISVDVSQDYNQVENVIKQAQEKLGPVDMLVNCAGMAVSGKFEDLEVST 137
Query: 118 LDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSM 177
+ +M++N G+ S+A I +K+ +V I+ +S + AY+ +K+
Sbjct: 138 FERLMSINYLGSVYPSRAVITTMKERRVGRIVFVSS--QAGQLGLFGFTAYSASKFA--- 192
Query: 178 YVLGMAEEFKGEI 190
+ G+AE + E+
Sbjct: 193 -IRGLAEALQMEV 204
>gi|19923817 peroxisomal trans-2-enoyl-CoA reductase [Homo sapiens]
Length = 303
Score = 65.9 bits (159), Expect = 7e-11
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 12/154 (7%)
Query: 6 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEA-- 63
G L G +TG + GIGKAI + + G+N+VIA++ L + +AA+E++A
Sbjct: 14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRK-------LERLKSAADELQANL 66
Query: 64 ---VGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDL 120
+ +P ++R+E++++ V+ + FG I+ LVNN L+ +K
Sbjct: 67 PPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHA 126
Query: 121 MMNVNTRGTYLASKACIPYLKKSKVAHILNISPP 154
++ N GT+ KA K I+NI P
Sbjct: 127 VLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVP 160
>gi|59889578 dehydrogenase/reductase (SDR family) member 10 [Homo
sapiens]
Length = 270
Score = 65.5 bits (158), Expect = 9e-11
Identities = 47/147 (31%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 7 RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGG 66
R AG V +TG RGIG I GA +VI K L E E G
Sbjct: 6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRAL---------EQELPGA 56
Query: 67 KALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNAS-AISLTNTLDTPTKRLDLMMNVN 125
+ C DV E + V + I++FG +D +VNNA +T + ++ +N
Sbjct: 57 VFILC--DVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELN 114
Query: 126 TRGTYLASKACIPYLKKSKVAHILNIS 152
GTY +K +PYL+KS+ +++NIS
Sbjct: 115 LLGTYTLTKLALPYLRKSQ-GNVINIS 140
>gi|225579078 retinol dehydrogenase 13 isoform 1 [Homo sapiens]
Length = 331
Score = 65.1 bits (157), Expect = 1e-10
Identities = 55/212 (25%), Positives = 94/212 (44%), Gaps = 23/212 (10%)
Query: 3 PNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEI- 61
P+ + G TV +TGA+ GIGK AL+ A+ G NI++A + + AA++I
Sbjct: 31 PSKATIPGKTVIVTGANTGIGKQTALELARRGGNIILACRDME-------KCEAAAKDIR 83
Query: 62 -EAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDL 120
E + +D+ + I K I++ +DIL+NNA + + T ++
Sbjct: 84 GETLNHHVNARHLDLASLKSIREFAAKIIEEEERVDILINNAGVMRCPHW--TTEDGFEM 141
Query: 121 MMNVNTRGTYLASKACIPYLKKSKVAHILNIS-----------PPLNLNPVWFKQHCAYT 169
VN G +L + + LK S + I+N+S LN + AY
Sbjct: 142 QFGVNHLGHFLLTNLLLDKLKASAPSRIINLSSLAHVAGHIDFDDLNWQTRKYNTKAAYC 201
Query: 170 IAKYGMSMYVLGMAEEFKGE-IAVNALWPKTA 200
+K + ++ ++ +G + VNAL P A
Sbjct: 202 QSKLAIVLFTKELSRRLQGSGVTVNALHPGVA 233
>gi|31543615 dehydrogenase/reductase (SDR family) member 3 [Homo
sapiens]
Length = 302
Score = 63.9 bits (154), Expect = 3e-10
Identities = 43/149 (28%), Positives = 77/149 (51%), Gaps = 8/149 (5%)
Query: 13 VFITGASRGIGKAIALKAAKDGAN-IVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPC 71
V ITG RGIG+ +A + A+ GA IV+ +T + + EEI +G +
Sbjct: 41 VLITGGGRGIGRQLAREFAERGARKIVLWGRTEK-------CLKETTEEIRQMGTECHYF 93
Query: 72 IVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYL 131
I DV + +++ + +K G I ILVNNA+ + + +D+ L ++NT G +
Sbjct: 94 ICDVGNREEVYQTAKAVREKVGDITILVNNAAVVHGKSLMDSDDDALLKSQHINTLGQFW 153
Query: 132 ASKACIPYLKKSKVAHILNISPPLNLNPV 160
+KA +P + + + HI+ ++ L L+ +
Sbjct: 154 TTKAFLPRMLELQNGHIVCLNSVLALSAI 182
>gi|5031737 dehydrogenase/reductase member 2 isoform 2 [Homo
sapiens]
Length = 280
Score = 63.9 bits (154), Expect = 3e-10
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 6 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVG 65
G LA +TG++ GIG AIA + A+DGA++VI+++ Q + A +++ G
Sbjct: 32 GVLANRVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQQ-------NVDRAMAKLQGEG 84
Query: 66 GKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLT-NTLDTPTKRLDLMMNV 124
+ V + V KA++ GG+D LV +A L +TL T + D +++V
Sbjct: 85 LSVAGIVCHVGKAEDREQLVAKALEHCGGVDFLVCSAGVNPLVGSTLGTSEQIWDKILSV 144
Query: 125 NTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV 160
N + L +PY++ + A IL +S NPV
Sbjct: 145 NVKSPALLLSQLLPYMENRRGAVIL-VSSIAAYNPV 179
>gi|33667109 dehydrogenase/reductase member 2 isoform 1 [Homo
sapiens]
Length = 300
Score = 63.9 bits (154), Expect = 3e-10
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 6 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVG 65
G LA +TG++ GIG AIA + A+DGA++VI+++ Q + A +++ G
Sbjct: 32 GVLANRVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQQ-------NVDRAMAKLQGEG 84
Query: 66 GKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLT-NTLDTPTKRLDLMMNV 124
+ V + V KA++ GG+D LV +A L +TL T + D +++V
Sbjct: 85 LSVAGIVCHVGKAEDREQLVAKALEHCGGVDFLVCSAGVNPLVGSTLGTSEQIWDKILSV 144
Query: 125 NTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV 160
N + L +PY++ + A IL +S NPV
Sbjct: 145 NVKSPALLLSQLLPYMENRRGAVIL-VSSIAAYNPV 179
>gi|66933014 3-hydroxybutyrate dehydrogenase, type 2 [Homo sapiens]
Length = 245
Score = 63.5 bits (153), Expect = 3e-10
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 18/215 (8%)
Query: 6 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVG 65
GRL G + +T A++GIG+A AL A++GA ++ T KL +E+E
Sbjct: 2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIA---TDINESKL--------QELEKYP 50
Query: 66 GKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVN 125
G ++DV ++QI + + +D+L N A + LD K D MN+N
Sbjct: 51 GIQTR-VLDVTKKKQIDQFANEVER----LDVLFNVAGFVHHGTVLDCEEKDWDFSMNLN 105
Query: 126 TRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEE 185
R YL KA +P + K +I+N+S + + C Y+ K + +A +
Sbjct: 106 VRSMYLMIKAFLPKMLAQKSGNIINMSSVAS-SVKGVVNRCVYSTTKAAVIGLTKSVAAD 164
Query: 186 F-KGEIAVNALWPKTAIHTAAMDMLGGPGIESQCR 219
F + I N + P T + + + G + R
Sbjct: 165 FIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEAR 199
>gi|223646115 short chain dehydrogenase/reductase family 16C, member
6 [Homo sapiens]
Length = 323
Score = 62.0 bits (149), Expect = 1e-09
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 6/145 (4%)
Query: 8 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGK 67
+AG V TGA G+G+ +A+ A+ GA +V+ + G + T E G K
Sbjct: 34 VAGEIVLTTGAGSGLGRQLAIYFARFGAILVLWDVNQE------GNMETCRLAKEKGGKK 87
Query: 68 ALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTR 127
P D + Q++ ++ K+FG + ILVNNA ++ LD P ++ VN
Sbjct: 88 VFPYTCDCSNRQEVYRVADQVRKEFGDVTILVNNADLVTGKPFLDIPDHMVEKSFLVNAI 147
Query: 128 GTYLASKACIPYLKKSKVAHILNIS 152
+ KA +P + K+ H++ IS
Sbjct: 148 THFWTCKAFLPAVIKANHGHLVCIS 172
>gi|20149619 dehydrogenase/reductase (SDR family) member 7B [Homo
sapiens]
Length = 325
Score = 62.0 bits (149), Expect = 1e-09
Identities = 57/197 (28%), Positives = 87/197 (44%), Gaps = 5/197 (2%)
Query: 8 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGK 67
L V ITGA+ G+GK A GA +V+ + +L+ + TA+ + K
Sbjct: 50 LRNAVVVITGATSGLGKECAKVFYAAGAKLVLCGRNGGALEELIREL-TASHATKVQTHK 108
Query: 68 ALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTR 127
D+ D I AA + ++ FG +DILVNNA +DT +M N
Sbjct: 109 PYLVTFDLTDSGAIVAAAAEILQCFGYVDILVNNAGISYRGTIMDTTVDVDKRVMETNYF 168
Query: 128 GTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYG-MSMYVLGMAEEF 186
G +KA +P + K + HI+ IS + F+ AY +K+ + + AE
Sbjct: 169 GPVALTKALLPSMIKRRQGHIVAISSIQGKMSIPFRS--AYAASKHATQAFFDCLRAEME 226
Query: 187 KGEIAVNALWPKTAIHT 203
+ EI V + P IHT
Sbjct: 227 QYEIEVTVISP-GYIHT 242
>gi|109715829 short-chain dehydrogenase/reductase [Homo sapiens]
Length = 260
Score = 60.8 bits (146), Expect = 2e-09
Identities = 48/189 (25%), Positives = 78/189 (41%), Gaps = 11/189 (5%)
Query: 3 PNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIE 62
P R +TGAS GIG A+A + G +V A+T +G I A E +
Sbjct: 4 PGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCART-------VGNIEELAAECK 56
Query: 63 AVG--GKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDL 120
+ G G +P D+ +E+ I + + G+DI +NNA L T
Sbjct: 57 SAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKD 116
Query: 121 MMNVNTRGTYLASKACIPYLKKSKV--AHILNISPPLNLNPVWFKQHCAYTIAKYGMSMY 178
M NVN + ++ +K+ V HI+NI+ + Y+ KY ++
Sbjct: 117 MFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTAL 176
Query: 179 VLGMAEEFK 187
G+ +E +
Sbjct: 177 TEGLRQELR 185
>gi|32483357 peroxisomal short-chain alcohol dehydrogenase [Homo
sapiens]
Length = 278
Score = 60.1 bits (144), Expect = 4e-09
Identities = 40/153 (26%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 8 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGK 67
LA +T ++ GIG AIA + A+DGA++V++++ Q + A ++ G
Sbjct: 30 LANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQ-------NVDQAVATLQGEGLS 82
Query: 68 ALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRL-DLMMNVNT 126
+ V + V A+K GGIDILV+NA+ ++ T+ + D +++N
Sbjct: 83 VTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDINV 142
Query: 127 RGTYLASKACIPYLKKSKVAHILNISPPLNLNP 159
+ L +KA +P ++K ++ +S +P
Sbjct: 143 KAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSP 175
>gi|40807363 epidermal retinal dehydrogenase 2 [Homo sapiens]
Length = 309
Score = 60.1 bits (144), Expect = 4e-09
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 9/184 (4%)
Query: 8 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGK 67
+AG V ITGA G+G+ +AL+ A+ G+ +V+ + + + A E A
Sbjct: 38 VAGEIVLITGAGSGLGRLLALQFARLGSVLVLWDINKEGNEETC----KMAREAGATRVH 93
Query: 68 ALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTR 127
A C D ++ + ++ K+ G + IL+NNA ++ LD P + ++ +VN +
Sbjct: 94 AYTC--DCSQKEGVYRVADQVKKEVGDVSILINNAGIVTGKKFLDCPDELMEKSFDVNFK 151
Query: 128 GTYLASKACIPYLKKSKVAHILNISPPLNLNPV-WFKQHCAYTIAKYGM--SMYVLGMAE 184
KA +P + + H++ IS L+ V +CA A +G S++V +
Sbjct: 152 AHLWTYKAFLPAMIANDHGHLVCISSSAGLSGVNGLADYCASKFAAFGFAESVFVETFVQ 211
Query: 185 EFKG 188
+ KG
Sbjct: 212 KQKG 215
>gi|7706318 dehydrogenase/reductase (SDR family) member 7 [Homo
sapiens]
Length = 339
Score = 59.3 bits (142), Expect = 6e-09
Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 5/178 (2%)
Query: 8 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGK 67
L V++TGAS GIG+ +A + +K G ++V++A+ +L E
Sbjct: 48 LTDMVVWVTGASSGIGEELAYQLSKLGVSLVLSARRVH---ELERVKRRCLENGNLKEKD 104
Query: 68 ALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTR 127
L +D+ D AA + +++FG IDILVNN + +DT ++ +N
Sbjct: 105 ILVLPLDLTDTGSHEAATKAVLQEFGRIDILVNNGGMSQRSLCMDTSLDVYRKLIELNYL 164
Query: 128 GTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEE 185
GT +K +P++ + K I+ ++ L + V Y +K+ + + G+ E
Sbjct: 165 GTVSLTKCVLPHMIERKQGKIVTVNSILGIISV--PLSIGYCASKHALRGFFNGLRTE 220
>gi|142976729 estradiol 17-beta-dehydrogenase 11 [Homo sapiens]
Length = 300
Score = 58.5 bits (140), Expect = 1e-08
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 8 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGK 67
+ G V ITGA GIG+ A + AK + +V+ G TAA+ + +G K
Sbjct: 34 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKH------GLEETAAK-CKGLGAK 86
Query: 68 ALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTR 127
+VD + + I ++ +K + G + ILVNNA + ++ T +++ VN
Sbjct: 87 VHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVL 146
Query: 128 GTYLASKACIPYLKKSKVAHILNIS 152
+ +KA +P + K+ HI+ ++
Sbjct: 147 AHFWTTKAFLPAMTKNNHGHIVTVA 171
>gi|210032110 hydroxysteroid (17-beta) dehydrogenase 13 isoform A
[Homo sapiens]
Length = 300
Score = 56.6 bits (135), Expect = 4e-08
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 8 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGK 67
+AG V ITGA GIG+ + AK + +V+ + G TAAE +G
Sbjct: 34 VAGEIVLITGAGHGIGRQTTYEFAKRQSILVLWDINKR------GVEETAAE-CRKLGVT 86
Query: 68 ALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTR 127
A +VD + ++I ++ + K+ G + I+VNNA + + L T + + VN
Sbjct: 87 AHAYVVDCSNREEIYRSLNQVKKEVGDVTIVVNNAGTVYPADLLSTKDEEITKTFEVNIL 146
Query: 128 GTYLASKACIPYLKKSKVAHILNIS 152
G + +KA +P + + HI+ ++
Sbjct: 147 GHFWITKALLPSMMERNHGHIVTVA 171
>gi|30425406 hypothetical protein LOC140856 [Homo sapiens]
Length = 156
Score = 56.6 bits (135), Expect = 4e-08
Identities = 38/134 (28%), Positives = 69/134 (51%), Gaps = 16/134 (11%)
Query: 286 ESTGAVPEFKEEKLQLQPKPRSGAVEETFRIVKD------SLSDDVVKATQAIYLFELSG 339
E G+VPE P P + E+F + +D + +VK A++ +++
Sbjct: 23 EVLGSVPE------PAMPHPLELSEFESFPVFQDIRLHIREVGAQLVKKVNAVFQLDIT- 75
Query: 340 EDGGT---WFLDLKSKGGNVGYGEPSDQADVVMSMTTDDFVKMFSGKLKPTMAFMSGKLK 396
++G T W +DLK+ G++ G AD V ++ F+++ GK+ P AF++GK K
Sbjct: 76 KNGKTILRWTIDLKNGSGDMYPGPARLPADTVFTIPESVFMELVLGKMNPQKAFLAGKFK 135
Query: 397 IKGNMALAIKLEKL 410
+ G + L+ KLE++
Sbjct: 136 VSGKVLLSWKLERV 149
>gi|126723191 dehydrogenase/reductase (SDR family) member 4 like 2
[Homo sapiens]
Length = 232
Score = 56.2 bits (134), Expect = 5e-08
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 8/153 (5%)
Query: 8 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGK 67
L +T ++ GIG AIA + A+D A++V++++ Q + A ++ G
Sbjct: 30 LTNKVALVTASTDGIGFAIARRLAQDRAHVVVSSRKQQ-------NVDQAVATLQGEGLS 82
Query: 68 ALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRL-DLMMNVNT 126
+ V + V A+K GGIDILV+NA+ +L T+ + D +++N
Sbjct: 83 VTGTVCHVGKAEDRERLVAMAVKLHGGIDILVSNAAVNPFFGSLMDVTEEVWDKTLDINV 142
Query: 127 RGTYLASKACIPYLKKSKVAHILNISPPLNLNP 159
+ L +KA +P ++K ++ +S +P
Sbjct: 143 KAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSP 175
>gi|7705925 dicarbonyl/L-xylulose reductase [Homo sapiens]
Length = 244
Score = 55.1 bits (131), Expect = 1e-07
Identities = 54/192 (28%), Positives = 80/192 (41%), Gaps = 19/192 (9%)
Query: 8 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGK 67
LAG V +TGA +GIG+ GA +V ++T L ++ IE
Sbjct: 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQAD----LDSLVRECPGIE----- 55
Query: 68 ALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTR 127
P VD+ D + A E+A+ G +D+LVNNA+ L L+ + D VN R
Sbjct: 56 --PVCVDLGDWE----ATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLR 109
Query: 128 GTYLASK-ACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEF 186
S+ + + I+N+S + V H Y K + M MA E
Sbjct: 110 AVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV--TNHSVYCSTKGALDMLTKVMALEL 167
Query: 187 -KGEIAVNALWP 197
+I VNA+ P
Sbjct: 168 GPHKIRVNAVNP 179
>gi|31542939 hydroxyprostaglandin dehydrogenase 15-(NAD) isoform 1
[Homo sapiens]
Length = 266
Score = 54.7 bits (130), Expect = 2e-07
Identities = 56/206 (27%), Positives = 87/206 (42%), Gaps = 22/206 (10%)
Query: 10 GCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKAL 69
G +TGA++GIG+A A GA + + + G AA + + K L
Sbjct: 5 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEA-----GVQCKAALDEQFEPQKTL 59
Query: 70 PCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGT 129
DV D+QQ+ K + FG +DILVNNA N K L + + GT
Sbjct: 60 FIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAG----VNNEKNWEKTLQINLVSVISGT 115
Query: 130 YLASKACIPYLKKSKVAH---ILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLG---MA 183
YL + Y+ K I+N+S L PV Q Y +K+G+ + A
Sbjct: 116 YLG----LDYMSKQNGGEGGIIINMSSLAGLMPV--AQQPVYCASKHGIVGFTRSAALAA 169
Query: 184 EEFKGEIAVNALWPKTAIHTAAMDML 209
+ +NA+ P ++TA ++ +
Sbjct: 170 NLMNSGVRLNAICP-GFVNTAILESI 194
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,925,899
Number of Sequences: 37866
Number of extensions: 647857
Number of successful extensions: 1462
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 1361
Number of HSP's gapped (non-prelim): 78
length of query: 418
length of database: 18,247,518
effective HSP length: 105
effective length of query: 313
effective length of database: 14,271,588
effective search space: 4467007044
effective search space used: 4467007044
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.