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Search of human proteins with 32455264
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|32455264 peroxiredoxin 1 [Homo sapiens]
(199 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|32455266 peroxiredoxin 1 [Homo sapiens] 412 e-115
gi|32455264 peroxiredoxin 1 [Homo sapiens] 412 e-115
gi|4505591 peroxiredoxin 1 [Homo sapiens] 412 e-115
gi|32189392 peroxiredoxin 2 isoform a [Homo sapiens] 332 2e-91
gi|5453549 peroxiredoxin 4 [Homo sapiens] 287 5e-78
gi|5802974 peroxiredoxin 3 isoform a precursor [Homo sapiens] 264 3e-71
gi|32483377 peroxiredoxin 3 isoform b [Homo sapiens] 264 3e-71
gi|239757765 PREDICTED: similar to thioredoxin peroxidase [Homo ... 193 7e-50
gi|33188454 peroxiredoxin 2 isoform c [Homo sapiens] 145 2e-35
gi|4758638 peroxiredoxin 6 [Homo sapiens] 80 1e-15
gi|169205475 PREDICTED: similar to peroxiredoxin 6 [Homo sapiens] 35 0.055
gi|4505445 neuropeptide Y receptor Y1 [Homo sapiens] 30 1.8
gi|186928821 hepatoma-derived growth factor isoform c [Homo sapi... 28 6.7
gi|186928819 hepatoma-derived growth factor isoform b [Homo sapi... 28 6.7
gi|4758516 hepatoma-derived growth factor isoform a [Homo sapiens] 28 6.7
gi|75832029 connexin 43-interacting protein 150 isoform a [Homo ... 28 6.7
>gi|32455266 peroxiredoxin 1 [Homo sapiens]
Length = 199
Score = 412 bits (1059), Expect = e-115
Identities = 199/199 (100%), Positives = 199/199 (100%)
Query: 1 MSSGNAKIGHPAPNFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFS 60
MSSGNAKIGHPAPNFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFS
Sbjct: 1 MSSGNAKIGHPAPNFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFS 60
Query: 61 DRAEEFKKLNCQVIGASVDSHFCHLAWVNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLK 120
DRAEEFKKLNCQVIGASVDSHFCHLAWVNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLK
Sbjct: 61 DRAEEFKKLNCQVIGASVDSHFCHLAWVNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLK 120
Query: 121 ADEGISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKHGEVCPAGWKPG 180
ADEGISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKHGEVCPAGWKPG
Sbjct: 121 ADEGISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKHGEVCPAGWKPG 180
Query: 181 SDTIKPDVQKSKEYFSKQK 199
SDTIKPDVQKSKEYFSKQK
Sbjct: 181 SDTIKPDVQKSKEYFSKQK 199
>gi|32455264 peroxiredoxin 1 [Homo sapiens]
Length = 199
Score = 412 bits (1059), Expect = e-115
Identities = 199/199 (100%), Positives = 199/199 (100%)
Query: 1 MSSGNAKIGHPAPNFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFS 60
MSSGNAKIGHPAPNFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFS
Sbjct: 1 MSSGNAKIGHPAPNFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFS 60
Query: 61 DRAEEFKKLNCQVIGASVDSHFCHLAWVNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLK 120
DRAEEFKKLNCQVIGASVDSHFCHLAWVNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLK
Sbjct: 61 DRAEEFKKLNCQVIGASVDSHFCHLAWVNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLK 120
Query: 121 ADEGISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKHGEVCPAGWKPG 180
ADEGISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKHGEVCPAGWKPG
Sbjct: 121 ADEGISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKHGEVCPAGWKPG 180
Query: 181 SDTIKPDVQKSKEYFSKQK 199
SDTIKPDVQKSKEYFSKQK
Sbjct: 181 SDTIKPDVQKSKEYFSKQK 199
>gi|4505591 peroxiredoxin 1 [Homo sapiens]
Length = 199
Score = 412 bits (1059), Expect = e-115
Identities = 199/199 (100%), Positives = 199/199 (100%)
Query: 1 MSSGNAKIGHPAPNFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFS 60
MSSGNAKIGHPAPNFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFS
Sbjct: 1 MSSGNAKIGHPAPNFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFS 60
Query: 61 DRAEEFKKLNCQVIGASVDSHFCHLAWVNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLK 120
DRAEEFKKLNCQVIGASVDSHFCHLAWVNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLK
Sbjct: 61 DRAEEFKKLNCQVIGASVDSHFCHLAWVNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLK 120
Query: 121 ADEGISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKHGEVCPAGWKPG 180
ADEGISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKHGEVCPAGWKPG
Sbjct: 121 ADEGISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKHGEVCPAGWKPG 180
Query: 181 SDTIKPDVQKSKEYFSKQK 199
SDTIKPDVQKSKEYFSKQK
Sbjct: 181 SDTIKPDVQKSKEYFSKQK 199
>gi|32189392 peroxiredoxin 2 isoform a [Homo sapiens]
Length = 198
Score = 332 bits (850), Expect = 2e-91
Identities = 154/197 (78%), Positives = 180/197 (91%), Gaps = 1/197 (0%)
Query: 1 MSSGNAKIGHPAPNFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFS 60
M+SGNA+IG PAP+FKATAV+ DG FK++ LSDYKGKYVV FFYPLDFTFVCPTEIIAFS
Sbjct: 1 MASGNARIGKPAPDFKATAVV-DGAFKEVKLSDYKGKYVVLFFYPLDFTFVCPTEIIAFS 59
Query: 61 DRAEEFKKLNCQVIGASVDSHFCHLAWVNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLK 120
+RAE+F+KL C+V+G SVDS F HLAW+NTP+K+GGLGP+NIPL++D R +++DYGVLK
Sbjct: 60 NRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLK 119
Query: 121 ADEGISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKHGEVCPAGWKPG 180
DEGI++RGLFIID KG+LRQITVNDLPVGRSVDE LRLVQAFQ+TD+HGEVCPAGWKPG
Sbjct: 120 TDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQYTDEHGEVCPAGWKPG 179
Query: 181 SDTIKPDVQKSKEYFSK 197
SDTIKP+V SKEYFSK
Sbjct: 180 SDTIKPNVDDSKEYFSK 196
>gi|5453549 peroxiredoxin 4 [Homo sapiens]
Length = 271
Score = 287 bits (734), Expect = 5e-78
Identities = 135/192 (70%), Positives = 160/192 (83%), Gaps = 1/192 (0%)
Query: 6 AKIGHPAPNFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFSDRAEE 65
AKI PAP ++ TAV+ DG+FK++ L+DY+GKY+VFFFYPLDFTFVCPTEIIAF DR EE
Sbjct: 79 AKISKPAPYWEGTAVI-DGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEE 137
Query: 66 FKKLNCQVIGASVDSHFCHLAWVNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKADEGI 125
F+ +N +V+ SVDS F HLAW+NTP++QGGLGP+ IPL+SD I++DYGV D G
Sbjct: 138 FRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGH 197
Query: 126 SFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKHGEVCPAGWKPGSDTIK 185
+ RGLFIIDDKGILRQIT+NDLPVGRSVDETLRLVQAFQ+TDKHGEVCPAGWKPGS+TI
Sbjct: 198 TLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSETII 257
Query: 186 PDVQKSKEYFSK 197
PD +YF K
Sbjct: 258 PDPAGKLKYFDK 269
>gi|5802974 peroxiredoxin 3 isoform a precursor [Homo sapiens]
Length = 256
Score = 264 bits (675), Expect = 3e-71
Identities = 122/186 (65%), Positives = 150/186 (80%), Gaps = 1/186 (0%)
Query: 12 APNFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLNC 71
AP FK TAV+ +G+FKD+SL D+KGKY+V FFYPLDFTFVCPTEI+AFSD+A EF +NC
Sbjct: 69 APYFKGTAVV-NGEFKDLSLDDFKGKYLVLFFYPLDFTFVCPTEIVAFSDKANEFHDVNC 127
Query: 72 QVIGASVDSHFCHLAWVNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKADEGISFRGLF 131
+V+ SVDSHF HLAW+NTP+K GGLG MNI L+SD + I++DYGVL G++ RGLF
Sbjct: 128 EVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGSGLALRGLF 187
Query: 132 IIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKHGEVCPAGWKPGSDTIKPDVQKS 191
IID G+++ ++VNDLPVGRSV+ETLRLV+AFQ+ + HGEVCPA W P S TIKP S
Sbjct: 188 IIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQYVETHGEVCPANWTPDSPTIKPSPAAS 247
Query: 192 KEYFSK 197
KEYF K
Sbjct: 248 KEYFQK 253
>gi|32483377 peroxiredoxin 3 isoform b [Homo sapiens]
Length = 238
Score = 264 bits (675), Expect = 3e-71
Identities = 122/186 (65%), Positives = 150/186 (80%), Gaps = 1/186 (0%)
Query: 12 APNFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLNC 71
AP FK TAV+ +G+FKD+SL D+KGKY+V FFYPLDFTFVCPTEI+AFSD+A EF +NC
Sbjct: 51 APYFKGTAVV-NGEFKDLSLDDFKGKYLVLFFYPLDFTFVCPTEIVAFSDKANEFHDVNC 109
Query: 72 QVIGASVDSHFCHLAWVNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKADEGISFRGLF 131
+V+ SVDSHF HLAW+NTP+K GGLG MNI L+SD + I++DYGVL G++ RGLF
Sbjct: 110 EVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGSGLALRGLF 169
Query: 132 IIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKHGEVCPAGWKPGSDTIKPDVQKS 191
IID G+++ ++VNDLPVGRSV+ETLRLV+AFQ+ + HGEVCPA W P S TIKP S
Sbjct: 170 IIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQYVETHGEVCPANWTPDSPTIKPSPAAS 229
Query: 192 KEYFSK 197
KEYF K
Sbjct: 230 KEYFQK 235
>gi|239757765 PREDICTED: similar to thioredoxin peroxidase [Homo
sapiens]
Length = 233
Score = 193 bits (491), Expect = 7e-50
Identities = 101/174 (58%), Positives = 122/174 (70%), Gaps = 25/174 (14%)
Query: 6 AKIGHPAPNFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFSDRAEE 65
AKI PAP ++ TAV+ DG+FK++ L+DY+GKY+VFFFYPLDFTFVCPTEIIAF DR EE
Sbjct: 79 AKISKPAPYWEGTAVI-DGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEE 137
Query: 66 FKKLNCQVIGASVDSHFCHLAWVNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKADEGI 125
F+ +N +V+ SVDS F HLAW +++ Y K +
Sbjct: 138 FRSINTEVVACSVDSQFTHLAW-----------------------SVSYTYIRRKKRMDL 174
Query: 126 SFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKHGEVCP-AGWK 178
+GLFIIDDKGILRQIT+NDLPVGRSVDETLRLVQAFQ+TDKHGE P + WK
Sbjct: 175 LLKGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEDNPRSSWK 228
>gi|33188454 peroxiredoxin 2 isoform c [Homo sapiens]
Length = 142
Score = 145 bits (366), Expect = 2e-35
Identities = 69/95 (72%), Positives = 82/95 (86%), Gaps = 2/95 (2%)
Query: 1 MSSGNAKIGHPAPNFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFS 60
M+SGNA+IG PAP+FKATAV+ DG FK++ LSDYKGKYVV FFYPLDFTFVCPTEIIAFS
Sbjct: 1 MASGNARIGKPAPDFKATAVV-DGAFKEVKLSDYKGKYVVLFFYPLDFTFVCPTEIIAFS 59
Query: 61 DRAEEFKKLNCQVIGASVDSHFCHLAWVNT-PKKQ 94
+RAE+F+KL C+V+G SVDS F HLAW PK++
Sbjct: 60 NRAEDFRKLGCEVLGVSVDSQFTHLAWYEQGPKRE 94
>gi|4758638 peroxiredoxin 6 [Homo sapiens]
Length = 224
Score = 79.7 bits (195), Expect = 1e-15
Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 16/206 (7%)
Query: 4 GNAKIGHPAPNFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFSDRA 63
G +G APNF+A + +F D L D G + F +P DFT VC TE+ + A
Sbjct: 3 GGLLLGDVAPNFEANTTVGRIRFHDF-LGDSWG---ILFSHPRDFTPVCTTELGRAAKLA 58
Query: 64 EEFKKLNCQVIGASVDSHFCHLAW---VNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVL- 119
EF K N ++I S+DS HLAW +N + + P++ D R +A G+L
Sbjct: 59 PEFAKRNVKLIALSIDSVEDHLAWSKDINAYNCEEPTEKLPFPIIDDRNRELAILLGMLD 118
Query: 120 ---KADEG--ISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKHGEVCP 174
K ++G ++ R +F+ L+ + GR+ DE LR+V + Q T + P
Sbjct: 119 PAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQLTAEKRVATP 178
Query: 175 AGWKPG-SDTIKPDV--QKSKEYFSK 197
WK G S + P + +++K+ F K
Sbjct: 179 VDWKDGDSVMVLPTIPEEEAKKLFPK 204
>gi|169205475 PREDICTED: similar to peroxiredoxin 6 [Homo sapiens]
Length = 137
Score = 34.7 bits (78), Expect = 0.055
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 40 VFFFYPLDFTFVCPTEIIAFSDRAEEFKKLNCQVIGASVDSHFCHLAW 87
+ F +P D VC E+ + A EF K N ++I + DS HLAW
Sbjct: 34 ILFSHPRDSKPVCTMELGRAAKLAPEFTKSNVKLIALATDSAEDHLAW 81
>gi|4505445 neuropeptide Y receptor Y1 [Homo sapiens]
Length = 384
Score = 29.6 bits (65), Expect = 1.8
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 20 VMPDGQFKDISLSDYKGKYVVFFFYPLD 47
VM D F++++L YK KYV F +P D
Sbjct: 178 VMTDEPFQNVTLDAYKDKYVCFDQFPSD 205
>gi|186928821 hepatoma-derived growth factor isoform c [Homo
sapiens]
Length = 233
Score = 27.7 bits (60), Expect = 6.7
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 25 QFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLN 70
+ + ++ KY VFFF + F+ P ++ + + E+F K N
Sbjct: 25 EMPEAAVKSTANKYQVFFFGTHETAFLGPKDLFPYEESKEKFGKPN 70
>gi|186928819 hepatoma-derived growth factor isoform b [Homo
sapiens]
Length = 256
Score = 27.7 bits (60), Expect = 6.7
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 25 QFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLN 70
+ + ++ KY VFFF + F+ P ++ + + E+F K N
Sbjct: 48 EMPEAAVKSTANKYQVFFFGTHETAFLGPKDLFPYEESKEKFGKPN 93
>gi|4758516 hepatoma-derived growth factor isoform a [Homo
sapiens]
Length = 240
Score = 27.7 bits (60), Expect = 6.7
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 25 QFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLN 70
+ + ++ KY VFFF + F+ P ++ + + E+F K N
Sbjct: 32 EMPEAAVKSTANKYQVFFFGTHETAFLGPKDLFPYEESKEKFGKPN 77
>gi|75832029 connexin 43-interacting protein 150 isoform a [Homo
sapiens]
Length = 1344
Score = 27.7 bits (60), Expect = 6.7
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 124 GISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKHGEVCPAGWKPGSDT 183
G+ R II+ ++ Q + D + +++ L V + TD CP G+KP +
Sbjct: 1205 GLILRESSIINQILVITQSSEVDGEMLQNIKTGLHAVDRWASTD-----CP-GYKPFLNI 1258
Query: 184 IKPDVQKSKEYFSKQ 198
IKP +QK E +Q
Sbjct: 1259 IKPQLQKLSEITEEQ 1273
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.139 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,824,336
Number of Sequences: 37866
Number of extensions: 329688
Number of successful extensions: 505
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 483
Number of HSP's gapped (non-prelim): 16
length of query: 199
length of database: 18,247,518
effective HSP length: 97
effective length of query: 102
effective length of database: 14,574,516
effective search space: 1486600632
effective search space used: 1486600632
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.