Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 31542207

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|31542207 B-cell novel protein 1 isoform a [Homo sapiens]
         (697 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|31542207 B-cell novel protein 1 isoform a [Homo sapiens]          1396   0.0  
gi|148664236 B-cell novel protein 1 isoform b [Homo sapiens]         1231   0.0  
gi|16757970 niban protein isoform 2 [Homo sapiens]                    237   2e-62
gi|51093863 hypothetical protein LOC64855 isoform 1 [Homo sapiens]    213   5e-55
gi|79750824 hypothetical protein LOC64855 isoform 2 [Homo sapiens]    201   2e-51
gi|57164948 solute carrier family 30 (zinc transporter), member ...    33   1.2  
gi|27735129 hypothetical protein LOC148345 [Homo sapiens]              32   2.6  
gi|71274152 hypothetical protein LOC388939 [Homo sapiens]              32   2.6  
gi|150417984 ATP-binding cassette, sub-family A, member 7 [Homo ...    30   7.6  
gi|72256200 B-cell CLL/lymphoma 9 [Homo sapiens]                       30   9.9  

>gi|31542207 B-cell novel protein 1 isoform a [Homo sapiens]
          Length = 697

 Score = 1396 bits (3614), Expect = 0.0
 Identities = 697/697 (100%), Positives = 697/697 (100%)

Query: 1   MGPDRKEVPLSRGTQAVVVGKGRGAPGDDSSMGGRPSSPLDKQQRQHLRGQVDTLLRNFL 60
           MGPDRKEVPLSRGTQAVVVGKGRGAPGDDSSMGGRPSSPLDKQQRQHLRGQVDTLLRNFL
Sbjct: 1   MGPDRKEVPLSRGTQAVVVGKGRGAPGDDSSMGGRPSSPLDKQQRQHLRGQVDTLLRNFL 60

Query: 61  PCYRGQLAASVLRQISRELGPQEPTGSQLLRSKKLPRVREHRGPLTQLRGHPPRWQPIFC 120
           PCYRGQLAASVLRQISRELGPQEPTGSQLLRSKKLPRVREHRGPLTQLRGHPPRWQPIFC
Sbjct: 61  PCYRGQLAASVLRQISRELGPQEPTGSQLLRSKKLPRVREHRGPLTQLRGHPPRWQPIFC 120

Query: 121 VLRGDGRLEWFSHKEEYENGGHCLGSTALTGYTLLTSQREYLRLLDALCPESLGDHTQEE 180
           VLRGDGRLEWFSHKEEYENGGHCLGSTALTGYTLLTSQREYLRLLDALCPESLGDHTQEE
Sbjct: 121 VLRGDGRLEWFSHKEEYENGGHCLGSTALTGYTLLTSQREYLRLLDALCPESLGDHTQEE 180

Query: 181 PDSLLEVPVSFPLFLQHPFRRHLCFSAATREAQHAWRLALQGGIRLQGTVLQRSQAPAAR 240
           PDSLLEVPVSFPLFLQHPFRRHLCFSAATREAQHAWRLALQGGIRLQGTVLQRSQAPAAR
Sbjct: 181 PDSLLEVPVSFPLFLQHPFRRHLCFSAATREAQHAWRLALQGGIRLQGTVLQRSQAPAAR 240

Query: 241 AFLDAVRLYRQHQGHFGDDDVTLGSDAEVLTAVLMREQLPALRAQTLPGLRGAGRARAWA 300
           AFLDAVRLYRQHQGHFGDDDVTLGSDAEVLTAVLMREQLPALRAQTLPGLRGAGRARAWA
Sbjct: 241 AFLDAVRLYRQHQGHFGDDDVTLGSDAEVLTAVLMREQLPALRAQTLPGLRGAGRARAWA 300

Query: 301 WTELLDAVHAAVLAGASAGLCAFQPEKDELLASLEKTIRPDVDQLLRQRARVAGRLRTDI 360
           WTELLDAVHAAVLAGASAGLCAFQPEKDELLASLEKTIRPDVDQLLRQRARVAGRLRTDI
Sbjct: 301 WTELLDAVHAAVLAGASAGLCAFQPEKDELLASLEKTIRPDVDQLLRQRARVAGRLRTDI 360

Query: 361 RGPLESCLRREVDPQLPRVVQTLLRTVEASLEAVRTLLAQGMDRLSHRLRQSPSGTRLRR 420
           RGPLESCLRREVDPQLPRVVQTLLRTVEASLEAVRTLLAQGMDRLSHRLRQSPSGTRLRR
Sbjct: 361 RGPLESCLRREVDPQLPRVVQTLLRTVEASLEAVRTLLAQGMDRLSHRLRQSPSGTRLRR 420

Query: 421 EVYSFGEMPWDLALMQTCYREAERSRGRLGQLAAPFGFLGMQSLVFGAQDLAQQLMADAV 480
           EVYSFGEMPWDLALMQTCYREAERSRGRLGQLAAPFGFLGMQSLVFGAQDLAQQLMADAV
Sbjct: 421 EVYSFGEMPWDLALMQTCYREAERSRGRLGQLAAPFGFLGMQSLVFGAQDLAQQLMADAV 480

Query: 481 ATFLQLADQCLTTALNCDQAAQRLERVRGRVLKKFKSDSGLAQRRFIRGWGLCIFLPFVL 540
           ATFLQLADQCLTTALNCDQAAQRLERVRGRVLKKFKSDSGLAQRRFIRGWGLCIFLPFVL
Sbjct: 481 ATFLQLADQCLTTALNCDQAAQRLERVRGRVLKKFKSDSGLAQRRFIRGWGLCIFLPFVL 540

Query: 541 SQLEPGCKKELPEFEGDVLAVGSQALTTEGIYEDVIRGCLLQRIDQELKKTLGANDVSCT 600
           SQLEPGCKKELPEFEGDVLAVGSQALTTEGIYEDVIRGCLLQRIDQELKKTLGANDVSCT
Sbjct: 541 SQLEPGCKKELPEFEGDVLAVGSQALTTEGIYEDVIRGCLLQRIDQELKKTLGANDVSCT 600

Query: 601 LDGCLEVPWEQEGAAPNLNLVSSFLAGRQAFTDFLCLPAKSSANWILAASLLSCSCFRSG 660
           LDGCLEVPWEQEGAAPNLNLVSSFLAGRQAFTDFLCLPAKSSANWILAASLLSCSCFRSG
Sbjct: 601 LDGCLEVPWEQEGAAPNLNLVSSFLAGRQAFTDFLCLPAKSSANWILAASLLSCSCFRSG 660

Query: 661 FHRDSRVFLVQLAEGLSHSLETVSSHSVWSFRPTPRQ 697
           FHRDSRVFLVQLAEGLSHSLETVSSHSVWSFRPTPRQ
Sbjct: 661 FHRDSRVFLVQLAEGLSHSLETVSSHSVWSFRPTPRQ 697


>gi|148664236 B-cell novel protein 1 isoform b [Homo sapiens]
          Length = 651

 Score = 1231 bits (3184), Expect = 0.0
 Identities = 614/614 (100%), Positives = 614/614 (100%)

Query: 1   MGPDRKEVPLSRGTQAVVVGKGRGAPGDDSSMGGRPSSPLDKQQRQHLRGQVDTLLRNFL 60
           MGPDRKEVPLSRGTQAVVVGKGRGAPGDDSSMGGRPSSPLDKQQRQHLRGQVDTLLRNFL
Sbjct: 1   MGPDRKEVPLSRGTQAVVVGKGRGAPGDDSSMGGRPSSPLDKQQRQHLRGQVDTLLRNFL 60

Query: 61  PCYRGQLAASVLRQISRELGPQEPTGSQLLRSKKLPRVREHRGPLTQLRGHPPRWQPIFC 120
           PCYRGQLAASVLRQISRELGPQEPTGSQLLRSKKLPRVREHRGPLTQLRGHPPRWQPIFC
Sbjct: 61  PCYRGQLAASVLRQISRELGPQEPTGSQLLRSKKLPRVREHRGPLTQLRGHPPRWQPIFC 120

Query: 121 VLRGDGRLEWFSHKEEYENGGHCLGSTALTGYTLLTSQREYLRLLDALCPESLGDHTQEE 180
           VLRGDGRLEWFSHKEEYENGGHCLGSTALTGYTLLTSQREYLRLLDALCPESLGDHTQEE
Sbjct: 121 VLRGDGRLEWFSHKEEYENGGHCLGSTALTGYTLLTSQREYLRLLDALCPESLGDHTQEE 180

Query: 181 PDSLLEVPVSFPLFLQHPFRRHLCFSAATREAQHAWRLALQGGIRLQGTVLQRSQAPAAR 240
           PDSLLEVPVSFPLFLQHPFRRHLCFSAATREAQHAWRLALQGGIRLQGTVLQRSQAPAAR
Sbjct: 181 PDSLLEVPVSFPLFLQHPFRRHLCFSAATREAQHAWRLALQGGIRLQGTVLQRSQAPAAR 240

Query: 241 AFLDAVRLYRQHQGHFGDDDVTLGSDAEVLTAVLMREQLPALRAQTLPGLRGAGRARAWA 300
           AFLDAVRLYRQHQGHFGDDDVTLGSDAEVLTAVLMREQLPALRAQTLPGLRGAGRARAWA
Sbjct: 241 AFLDAVRLYRQHQGHFGDDDVTLGSDAEVLTAVLMREQLPALRAQTLPGLRGAGRARAWA 300

Query: 301 WTELLDAVHAAVLAGASAGLCAFQPEKDELLASLEKTIRPDVDQLLRQRARVAGRLRTDI 360
           WTELLDAVHAAVLAGASAGLCAFQPEKDELLASLEKTIRPDVDQLLRQRARVAGRLRTDI
Sbjct: 301 WTELLDAVHAAVLAGASAGLCAFQPEKDELLASLEKTIRPDVDQLLRQRARVAGRLRTDI 360

Query: 361 RGPLESCLRREVDPQLPRVVQTLLRTVEASLEAVRTLLAQGMDRLSHRLRQSPSGTRLRR 420
           RGPLESCLRREVDPQLPRVVQTLLRTVEASLEAVRTLLAQGMDRLSHRLRQSPSGTRLRR
Sbjct: 361 RGPLESCLRREVDPQLPRVVQTLLRTVEASLEAVRTLLAQGMDRLSHRLRQSPSGTRLRR 420

Query: 421 EVYSFGEMPWDLALMQTCYREAERSRGRLGQLAAPFGFLGMQSLVFGAQDLAQQLMADAV 480
           EVYSFGEMPWDLALMQTCYREAERSRGRLGQLAAPFGFLGMQSLVFGAQDLAQQLMADAV
Sbjct: 421 EVYSFGEMPWDLALMQTCYREAERSRGRLGQLAAPFGFLGMQSLVFGAQDLAQQLMADAV 480

Query: 481 ATFLQLADQCLTTALNCDQAAQRLERVRGRVLKKFKSDSGLAQRRFIRGWGLCIFLPFVL 540
           ATFLQLADQCLTTALNCDQAAQRLERVRGRVLKKFKSDSGLAQRRFIRGWGLCIFLPFVL
Sbjct: 481 ATFLQLADQCLTTALNCDQAAQRLERVRGRVLKKFKSDSGLAQRRFIRGWGLCIFLPFVL 540

Query: 541 SQLEPGCKKELPEFEGDVLAVGSQALTTEGIYEDVIRGCLLQRIDQELKKTLGANDVSCT 600
           SQLEPGCKKELPEFEGDVLAVGSQALTTEGIYEDVIRGCLLQRIDQELKKTLGANDVSCT
Sbjct: 541 SQLEPGCKKELPEFEGDVLAVGSQALTTEGIYEDVIRGCLLQRIDQELKKTLGANDVSCT 600

Query: 601 LDGCLEVPWEQEGA 614
           LDGCLEVPWEQEGA
Sbjct: 601 LDGCLEVPWEQEGA 614


>gi|16757970 niban protein isoform 2 [Homo sapiens]
          Length = 928

 Score =  237 bits (605), Expect = 2e-62
 Identities = 156/560 (27%), Positives = 265/560 (47%), Gaps = 7/560 (1%)

Query: 32  MGGRPSSPLDKQQRQHLRGQVDTLLRNFLPCYRGQLAASVLRQISRELGPQEPTGSQLLR 91
           MGG  SS LD+ +  ++RG+ +  ++NF P Y  Q + +    +  E+  Q    SQ L+
Sbjct: 1   MGGSASSQLDEGKCAYIRGKTEAAIKNFSPYYSRQYSVAFCNHVRTEVEQQRDLTSQFLK 60

Query: 92  SKK--LPRVREHRGPLTQLRGHPPRWQPIFCVLRGDGRLEWFSHKEEYENGGHCLGSTAL 149
           +K    P    +   L+Q      +W+  + V++ D  +E + +KE Y+ G         
Sbjct: 61  TKPPLAPGTILYEAELSQFSEDIKKWKERYVVVKNDYAVESYENKEAYQRGAAPKCRILP 120

Query: 150 TGYTLLTSQREYLRLLDALCPESLGDHTQEEPDSLLEVPVSFPLFLQHPFRRHLCFSAAT 209
            G  +LTS+ EY  L D   P+ L    +E     + +P  FP++L  PF RH  F    
Sbjct: 121 AGGKVLTSEDEYNLLSDRHFPDPLASSEKENTQPFVVLPKEFPVYLWQPFFRHGYFCFHE 180

Query: 210 REAQHAWRLALQGGIRLQGTVLQRSQAPAARAFLDAVRLYRQHQGHFGDDDVTLGSDAEV 269
              Q  +   L   +R       +     A+AFL+AV+ +RQ +GH+G  ++  G + ++
Sbjct: 181 AADQKRFSALLSDCVRHLNHDYMKQMTFEAQAFLEAVQFFRQEKGHYGSWEMITGDEIQI 240

Query: 270 LTAVLMREQLPALRAQTLPGLRGAGRARAWAWTELLDAVHAAVLAGASAGLCAFQPEKDE 329
           L+ ++M E LP L+   LP ++G    R   W  LL+  +  V    S GL A + E   
Sbjct: 241 LSNLVMEELLPTLQTDLLPKMKGKKNDRKRTWLGLLEEAYTLVQHQVSEGLSALKEECRA 300

Query: 330 LLASLEKTIRPDVDQLLRQRARVAGRLRTDIRGPLESCLRREVDPQLPRVVQTLLRTVEA 389
           L   LE TIR D+DQ++  +  + G+++  +  P E      V P L  +++ L+  V +
Sbjct: 301 LTKGLEGTIRSDMDQIVNSKNYLIGKIKAMVAQPAEKSCLESVQPFLASILEELMGPVSS 360

Query: 390 SLEAVRTLLAQGMDRLSHRLRQSPSGTRLRREVYSFGEMPWDLALMQTCYREAERSRGRL 449
               VR L  + ++ +S   + +    +L+  +     +P     M+ CY +      RL
Sbjct: 361 GFSEVRVLFEKEVNEVSQNFQTTKDSVQLKEHLDRLMNLPLHSVKMEPCYTKVNLLHERL 420

Query: 450 GQLAAPFGFLGMQSLVFGAQDLAQQLMADAVATFLQLADQCLTTALNCDQAAQRLERVRG 509
             L + F F  +  +V   Q+  Q+LM +AV TF QL    L       + A  +E+V+ 
Sbjct: 421 QDLKSRFRFPHIDLVVQRTQNYMQELMENAVFTFEQLLSPHLQG--EASKTAVAIEKVKL 478

Query: 510 RVLKKFKSDSGLAQRRFIRGWGLCIFLPFVLSQLEPGCKKELPEFEGDVLAVGSQALTTE 569
           RVLK++  DS   +++  +   + I LP V   L   CK EL ++E  + A  +  +  E
Sbjct: 479 RVLKQYDYDSSTIRKKIFQEALVQITLPTVQKALASTCKPELQKYEQFIFADHTNMIHVE 538

Query: 570 GIYEDVIRGCLLQRIDQELK 589
            +YE+++   LL   D+ LK
Sbjct: 539 NVYEEILHQILL---DETLK 555


>gi|51093863 hypothetical protein LOC64855 isoform 1 [Homo sapiens]
          Length = 746

 Score =  213 bits (542), Expect = 5e-55
 Identities = 152/560 (27%), Positives = 255/560 (45%), Gaps = 6/560 (1%)

Query: 32  MGGRPSSPLDKQQRQHLRGQVDTLLRNFLPCYRGQLAASVLRQISREL-GPQEPTGSQLL 90
           MG   S+ LD  +RQH+  +   +L  FL  Y  Q   ++   +  E+ G   P    L 
Sbjct: 1   MGDVLSTHLDDARRQHIAEKTGKILTEFLQFYEDQYGVALFNSMRHEIEGTGLPQAQLLW 60

Query: 91  RSKKLPRVREHRGPLTQLRGHPPRWQPIFCVLRGDGRLEWFSHKEEYENGGHCLGSTALT 150
           R   L       G L Q +    +W+  F ++  +  L  + +K  YE            
Sbjct: 61  RKVPLDERIVFSGNLFQHQEDSKKWRNRFSLVPHNYGLVLYENKAAYERQVPPRAVINSA 120

Query: 151 GYTLLTSQREYLRLLDALCPESLGDHTQEEPDSLLEVPVSFPLFLQHPFRRHLCFSAATR 210
           GY +LTS  +YL L+    P   G   +     +L+ P  FPL L HP+ RH  F   T 
Sbjct: 121 GYKILTSVDQYLELIGNSLP---GTTAKSGSAPILKCPTQFPLILWHPYARHYYFCMMTE 177

Query: 211 EAQHAWRLALQGGIRLQGTVLQRSQAPAARAFLDAVRLYRQHQGHFGDDDVTLGSDAEVL 270
             Q  W+  LQ  IR     +         AF DA+R+YRQ +  +G  ++  G++ ++L
Sbjct: 178 AEQDKWQAVLQDCIRHCNNGIPEDSKVEGPAFTDAIRMYRQSKELYGTWEMLCGNEVQIL 237

Query: 271 TAVLMREQLPALRAQTLPGLRGAGRARAWAWTELLDAVHAAVLAGASAGLCAFQPEKDEL 330
           + ++M E  P L+A+  P L+G  + R   W ++ DAV+  V   A A       +  ++
Sbjct: 238 SNLVMEELGPELKAELGPRLKGKPQERQRQWIQISDAVYHMVYEQAKARFEEVLSKVQQV 297

Query: 331 LASLEKTIRPDVDQLLRQRARVAGRLRTDIRGPLESCLRREVDPQLPRVVQTLLRTVEAS 390
             +++  IR D+DQ++  +  +A ++R  I    E C+R  V P +P +++ L+      
Sbjct: 298 QPAMQAVIRTDMDQIITSKEHLASKIRAFILPKAEVCVRNHVQPYIPSILEALMVPTSQG 357

Query: 391 LEAVRTLLAQGMDRLSHRLRQSPSGTRLRREVYSFGEMPWDLALMQTCYREAERSRGRLG 450
              VR +  + +  ++  +       +L   +     + +    MQ+CY + E    RL 
Sbjct: 358 FTEVRDVFFKEVTDMNLNVINEGGIDKLGEYMEKLSRLAYHPLKMQSCYEKMESL--RLD 415

Query: 451 QLAAPFGFLGMQSLVFGAQDLAQQLMADAVATFLQLADQCLTTALNCDQAAQRLERVRGR 510
            L   F           AQ   ++ M +AV TF  L  Q L      ++  + ++RV  R
Sbjct: 416 GLQQRFDVSSTSVFKQRAQIHMREQMDNAVYTFETLLHQELGKGPTKEELCKSIQRVLER 475

Query: 511 VLKKFKSDSGLAQRRFIRGWGLCIFLPFVLSQLEPGCKKELPEFEGDVLAVGSQALTTEG 570
           VLKK+  DS   ++RF R   L I +PF+L +L P CK ELP F+  +    ++ +  E 
Sbjct: 476 VLKKYDYDSSSVRKRFFREALLQISIPFLLKKLAPTCKSELPRFQELIFEDFARFILVEN 535

Query: 571 IYEDVIRGCLLQRIDQELKK 590
            YE+V+   +++ I Q +K+
Sbjct: 536 TYEEVVLQTVMKDILQAVKE 555


>gi|79750824 hypothetical protein LOC64855 isoform 2 [Homo sapiens]
          Length = 733

 Score =  201 bits (510), Expect = 2e-51
 Identities = 144/537 (26%), Positives = 243/537 (45%), Gaps = 6/537 (1%)

Query: 55  LLRNFLPCYRGQLAASVLRQISREL-GPQEPTGSQLLRSKKLPRVREHRGPLTQLRGHPP 113
           +L  FL  Y  Q   ++   +  E+ G   P    L R   L       G L Q +    
Sbjct: 11  ILTEFLQFYEDQYGVALFNSMRHEIEGTGLPQAQLLWRKVPLDERIVFSGNLFQHQEDSK 70

Query: 114 RWQPIFCVLRGDGRLEWFSHKEEYENGGHCLGSTALTGYTLLTSQREYLRLLDALCPESL 173
           +W+  F ++  +  L  + +K  YE            GY +LTS  +YL L+    P   
Sbjct: 71  KWRNRFSLVPHNYGLVLYENKAAYERQVPPRAVINSAGYKILTSVDQYLELIGNSLP--- 127

Query: 174 GDHTQEEPDSLLEVPVSFPLFLQHPFRRHLCFSAATREAQHAWRLALQGGIRLQGTVLQR 233
           G   +     +L+ P  FPL L HP+ RH  F   T   Q  W+  LQ  IR     +  
Sbjct: 128 GTTAKSGSAPILKCPTQFPLILWHPYARHYYFCMMTEAEQDKWQAVLQDCIRHCNNGIPE 187

Query: 234 SQAPAARAFLDAVRLYRQHQGHFGDDDVTLGSDAEVLTAVLMREQLPALRAQTLPGLRGA 293
                  AF DA+R+YRQ +  +G  ++  G++ ++L+ ++M E  P L+A+  P L+G 
Sbjct: 188 DSKVEGPAFTDAIRMYRQSKELYGTWEMLCGNEVQILSNLVMEELGPELKAELGPRLKGK 247

Query: 294 GRARAWAWTELLDAVHAAVLAGASAGLCAFQPEKDELLASLEKTIRPDVDQLLRQRARVA 353
            + R   W ++ DAV+  V   A A       +  ++  +++  IR D+DQ++  +  +A
Sbjct: 248 PQERQRQWIQISDAVYHMVYEQAKARFEEVLSKVQQVQPAMQAVIRTDMDQIITSKEHLA 307

Query: 354 GRLRTDIRGPLESCLRREVDPQLPRVVQTLLRTVEASLEAVRTLLAQGMDRLSHRLRQSP 413
            ++R  I    E C+R  V P +P +++ L+         VR +  + +  ++  +    
Sbjct: 308 SKIRAFILPKAEVCVRNHVQPYIPSILEALMVPTSQGFTEVRDVFFKEVTDMNLNVINEG 367

Query: 414 SGTRLRREVYSFGEMPWDLALMQTCYREAERSRGRLGQLAAPFGFLGMQSLVFGAQDLAQ 473
              +L   +     + +    MQ+CY + E    RL  L   F           AQ   +
Sbjct: 368 GIDKLGEYMEKLSRLAYHPLKMQSCYEKMESL--RLDGLQQRFDVSSTSVFKQRAQIHMR 425

Query: 474 QLMADAVATFLQLADQCLTTALNCDQAAQRLERVRGRVLKKFKSDSGLAQRRFIRGWGLC 533
           + M +AV TF  L  Q L      ++  + ++RV  RVLKK+  DS   ++RF R   L 
Sbjct: 426 EQMDNAVYTFETLLHQELGKGPTKEELCKSIQRVLERVLKKYDYDSSSVRKRFFREALLQ 485

Query: 534 IFLPFVLSQLEPGCKKELPEFEGDVLAVGSQALTTEGIYEDVIRGCLLQRIDQELKK 590
           I +PF+L +L P CK ELP F+  +    ++ +  E  YE+V+   +++ I Q +K+
Sbjct: 486 ISIPFLLKKLAPTCKSELPRFQELIFEDFARFILVENTYEEVVLQTVMKDILQAVKE 542


>gi|57164948 solute carrier family 30 (zinc transporter), member 9
           [Homo sapiens]
          Length = 568

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 11/136 (8%)

Query: 38  SPLDKQQRQHLRGQVDTLLRNFLPC---YRGQLAASVLRQISRELGPQEPTGSQLLRSKK 94
           +P D+Q+ Q+L         N +PC   Y G L+   L   + +   +E  GSQ LR +K
Sbjct: 31  NPSDRQEWQNL--VTFGSFSNMVPCSHPYIGTLSQVKLYSTNVQ---KEGQGSQTLRVEK 85

Query: 95  LPRVREHRGPLTQLRGHPPRWQPIFCVLRGDGRLEWFSHKEEYENGGHCLGSTALTGYTL 154
           +P      G  T+L+  P + +P+   +R    L+   +  +Y       G  A+  + L
Sbjct: 86  VPSFETAEGIGTELKA-PLKQEPL--QVRVKAVLKKREYGSKYTQNNFITGVRAINEFCL 142

Query: 155 LTSQREYLRLLDALCP 170
            +S  E LR +    P
Sbjct: 143 KSSDLEQLRKIRRRSP 158


>gi|27735129 hypothetical protein LOC148345 [Homo sapiens]
          Length = 656

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 35  RPSSPLDKQQRQHLRGQVDTLLRNFLPCYRGQLAASVL-RQISRELGPQEPTGSQLLRSK 93
           RPS  L K+        +   L+   P  RGQ +AS+L R +  + GPQ P G   +   
Sbjct: 256 RPSDALAKKG-------LGPFLQTAKPARRGQTSASILPRVVQAQRGPQPPPGEAGIPGH 308

Query: 94  KLPRVREHRGPLTQLRGHPPRWQPI 118
             P       P+  ++  P R +P+
Sbjct: 309 PTPPATLPSEPVEGVQASPWRPRPV 333


>gi|71274152 hypothetical protein LOC388939 [Homo sapiens]
          Length = 1288

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 20/117 (17%)

Query: 361 RGPLESCLRREVDPQLPRVVQTLLRTVEASLEAVRTLLAQGMDRLSHRL----------- 409
           R   ESCL+  V+    + ++ + R +   LEA   L A+G  +   ++           
Sbjct: 593 RSQSESCLQSHVEDPTFQELRRVQRDLSQKLEAFYALGAKGQGQSQEQILQPRAAAVWPN 652

Query: 410 ---RQSPSGTRLRRE---VYSFGEMP-WDLALMQTCYREAERSRGRLGQL--AAPFG 457
              R SPS T  R +     +F  +P  D +++Q C    E  +G+ G+L  A P G
Sbjct: 653 GTCRVSPSNTTSRLKASLTKNFSILPSQDKSILQKCNPHPEDEQGKAGKLPNAIPSG 709


>gi|150417984 ATP-binding cassette, sub-family A, member 7 [Homo
           sapiens]
          Length = 2146

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 8/94 (8%)

Query: 385 RTVEASLEAVRTLLAQGMDRLSHRLRQSPSGTRLRREVYSFGEMPW-DLALMQTCYREAE 443
           RTV     A RTL   G+ +L   LR + S  + +    S  E P  D+A + T     E
Sbjct: 110 RTVLGGASAHRTLA--GLGKLIATLRAARSTAQPQPTKQSPLEPPMLDVAELLTSLLRTE 167

Query: 444 RSRGRLGQLAAPFGFLGMQSLVFGAQDLAQQLMA 477
                LGQ   P     + SL+  A+DLAQ+L+A
Sbjct: 168 SLGLALGQAQEP-----LHSLLEAAEDLAQELLA 196


>gi|72256200 B-cell CLL/lymphoma 9 [Homo sapiens]
          Length = 1426

 Score = 29.6 bits (65), Expect = 9.9
 Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 9/71 (12%)

Query: 57  RNFLPCYRGQLAASVLRQISRELGPQEPTGSQLLRSKKLPRVREHRGPLTQLRGHPPRWQ 116
           R FLP  +G  + S LR +   +GP + T S+L     LP +     P T L   PP   
Sbjct: 782 RPFLPMSQGPGSNSGLRNLREPIGPDQRTNSRLSHMPPLP-LNPSSNP-TSLNTAPP--- 836

Query: 117 PIFCVLRGDGR 127
               V RG GR
Sbjct: 837 ----VQRGLGR 843


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.137    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,244,196
Number of Sequences: 37866
Number of extensions: 1259733
Number of successful extensions: 2940
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2927
Number of HSP's gapped (non-prelim): 12
length of query: 697
length of database: 18,247,518
effective HSP length: 109
effective length of query: 588
effective length of database: 14,120,124
effective search space: 8302632912
effective search space used: 8302632912
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press