Guide to the Human Genome
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Search of human proteins with 30520339

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|30520339 hypothetical protein LOC154313 isoform 2 [Homo
sapiens]
         (505 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|30520339 hypothetical protein LOC154313 isoform 2 [Homo sapiens]   996   0.0  
gi|72534780 hypothetical protein LOC154313 isoform 1 [Homo sapiens]   984   0.0  
gi|4504919 keratin 8 [Homo sapiens]                                    35   0.12 
gi|237858799 adenylate kinase domain containing 1 isoform 1 [Hom...    35   0.21 
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]             35   0.21 
gi|7657138 golgi integral membrane protein 4 [Homo sapiens]            34   0.27 
gi|54112429 dedicator of cytokinesis 7 [Homo sapiens]                  33   0.61 
gi|13699824 kinesin family member 11 [Homo sapiens]                    33   0.79 
gi|157426887 dedicator of cytokinesis 6 [Homo sapiens]                 33   0.79 
gi|15451914 BAI1-associated protein 3 [Homo sapiens]                   32   1.0  
gi|71061468 centromere protein E [Homo sapiens]                        32   1.4  
gi|41872631 fatty acid synthase [Homo sapiens]                         30   3.9  
gi|164420685 homeodomain interacting protein kinase 2 isoform 1 ...    30   6.7  
gi|8922633 high-mobility group 20A [Homo sapiens]                      29   8.8  

>gi|30520339 hypothetical protein LOC154313 isoform 2 [Homo sapiens]
          Length = 505

 Score =  996 bits (2575), Expect = 0.0
 Identities = 505/505 (100%), Positives = 505/505 (100%)

Query: 1   MPPTQAESVIRSIIREIGQECAAHGEIVSETLIAFMVKAVVLDPSNGFNMDRTLMKSDVQ 60
           MPPTQAESVIRSIIREIGQECAAHGEIVSETLIAFMVKAVVLDPSNGFNMDRTLMKSDVQ
Sbjct: 1   MPPTQAESVIRSIIREIGQECAAHGEIVSETLIAFMVKAVVLDPSNGFNMDRTLMKSDVQ 60

Query: 61  NLVKLCMTRLLDTKNPSLDTIKMQVYFDMNYTNRVEFLEEHHRVLESRLGSVTREITDNR 120
           NLVKLCMTRLLDTKNPSLDTIKMQVYFDMNYTNRVEFLEEHHRVLESRLGSVTREITDNR
Sbjct: 61  NLVKLCMTRLLDTKNPSLDTIKMQVYFDMNYTNRVEFLEEHHRVLESRLGSVTREITDNR 120

Query: 121 ACAKEELESLYRKIISYVLLRSGLGSPTDIKTVREVTAALQSVFPQAELGTFLTLSKKDK 180
           ACAKEELESLYRKIISYVLLRSGLGSPTDIKTVREVTAALQSVFPQAELGTFLTLSKKDK
Sbjct: 121 ACAKEELESLYRKIISYVLLRSGLGSPTDIKTVREVTAALQSVFPQAELGTFLTLSKKDK 180

Query: 181 ERQLKELTMIVTGIRLFNRDCGKGGEGIDDLPAVLHVAIPATMQHIDYQLETARSQVYRY 240
           ERQLKELTMIVTGIRLFNRDCGKGGEGIDDLPAVLHVAIPATMQHIDYQLETARSQVYRY
Sbjct: 181 ERQLKELTMIVTGIRLFNRDCGKGGEGIDDLPAVLHVAIPATMQHIDYQLETARSQVYRY 240

Query: 241 TAILEKAANDPLMRAELQPYMLKEALYNIRQYEVFLQIILSDIITGAQEVEMMTKQLGAH 300
           TAILEKAANDPLMRAELQPYMLKEALYNIRQYEVFLQIILSDIITGAQEVEMMTKQLGAH
Sbjct: 241 TAILEKAANDPLMRAELQPYMLKEALYNIRQYEVFLQIILSDIITGAQEVEMMTKQLGAH 300

Query: 301 LEQLKMTIKSKIAVPTSQVFPIFIALSTLWTSLQDETIVVGVLSNLFTHIQPFLGAHELY 360
           LEQLKMTIKSKIAVPTSQVFPIFIALSTLWTSLQDETIVVGVLSNLFTHIQPFLGAHELY
Sbjct: 301 LEQLKMTIKSKIAVPTSQVFPIFIALSTLWTSLQDETIVVGVLSNLFTHIQPFLGAHELY 360

Query: 361 FPERVMQCHLNGATVKTDVCRMKEHMEDRVNVADFRKLEWLFPETTANFDKLLIQYRGFC 420
           FPERVMQCHLNGATVKTDVCRMKEHMEDRVNVADFRKLEWLFPETTANFDKLLIQYRGFC
Sbjct: 361 FPERVMQCHLNGATVKTDVCRMKEHMEDRVNVADFRKLEWLFPETTANFDKLLIQYRGFC 420

Query: 421 AYTFAATDGLLLPGNPAIGILKYKEKYYTFNSKDAAYSFAENPEHYIDIVREKAKKNTEL 480
           AYTFAATDGLLLPGNPAIGILKYKEKYYTFNSKDAAYSFAENPEHYIDIVREKAKKNTEL
Sbjct: 421 AYTFAATDGLLLPGNPAIGILKYKEKYYTFNSKDAAYSFAENPEHYIDIVREKAKKNTEL 480

Query: 481 IQLLELHQQFETFIPYSQVSRVNIL 505
           IQLLELHQQFETFIPYSQVSRVNIL
Sbjct: 481 IQLLELHQQFETFIPYSQVSRVNIL 505


>gi|72534780 hypothetical protein LOC154313 isoform 1 [Homo sapiens]
          Length = 622

 Score =  984 bits (2545), Expect = 0.0
 Identities = 498/499 (99%), Positives = 499/499 (100%)

Query: 1   MPPTQAESVIRSIIREIGQECAAHGEIVSETLIAFMVKAVVLDPSNGFNMDRTLMKSDVQ 60
           MPPTQAESVIRSIIREIGQECAAHGEIVSETLIAFMVKAVVLDPSNGFNMDRTLMKSDVQ
Sbjct: 1   MPPTQAESVIRSIIREIGQECAAHGEIVSETLIAFMVKAVVLDPSNGFNMDRTLMKSDVQ 60

Query: 61  NLVKLCMTRLLDTKNPSLDTIKMQVYFDMNYTNRVEFLEEHHRVLESRLGSVTREITDNR 120
           NLVKLCMTRLLDTKNPSLDTIKMQVYFDMNYTNRVEFLEEHHRVLESRLGSVTREITDNR
Sbjct: 61  NLVKLCMTRLLDTKNPSLDTIKMQVYFDMNYTNRVEFLEEHHRVLESRLGSVTREITDNR 120

Query: 121 ACAKEELESLYRKIISYVLLRSGLGSPTDIKTVREVTAALQSVFPQAELGTFLTLSKKDK 180
           ACAKEELESLYRKIISYVLLRSGLGSPTDIKTVREVTAALQSVFPQAELGTFLTLSKKDK
Sbjct: 121 ACAKEELESLYRKIISYVLLRSGLGSPTDIKTVREVTAALQSVFPQAELGTFLTLSKKDK 180

Query: 181 ERQLKELTMIVTGIRLFNRDCGKGGEGIDDLPAVLHVAIPATMQHIDYQLETARSQVYRY 240
           ERQLKELTMIVTGIRLFNRDCGKGGEGIDDLPAVLHVAIPATMQHIDYQLETARSQVYRY
Sbjct: 181 ERQLKELTMIVTGIRLFNRDCGKGGEGIDDLPAVLHVAIPATMQHIDYQLETARSQVYRY 240

Query: 241 TAILEKAANDPLMRAELQPYMLKEALYNIRQYEVFLQIILSDIITGAQEVEMMTKQLGAH 300
           TAILEKAANDPLMRAELQPYMLKEALYNIRQYEVFLQIILSDIITGAQEVEMMTKQLGAH
Sbjct: 241 TAILEKAANDPLMRAELQPYMLKEALYNIRQYEVFLQIILSDIITGAQEVEMMTKQLGAH 300

Query: 301 LEQLKMTIKSKIAVPTSQVFPIFIALSTLWTSLQDETIVVGVLSNLFTHIQPFLGAHELY 360
           LEQLKMTIKSKIAVPTSQVFPIFIALSTLWTSLQDETIVVGVLSNLFTHIQPFLGAHELY
Sbjct: 301 LEQLKMTIKSKIAVPTSQVFPIFIALSTLWTSLQDETIVVGVLSNLFTHIQPFLGAHELY 360

Query: 361 FPERVMQCHLNGATVKTDVCRMKEHMEDRVNVADFRKLEWLFPETTANFDKLLIQYRGFC 420
           FPERVMQCHLNGATVKTDVCRMKEHMEDRVNVADFRKLEWLFPETTANFDKLLIQYRGFC
Sbjct: 361 FPERVMQCHLNGATVKTDVCRMKEHMEDRVNVADFRKLEWLFPETTANFDKLLIQYRGFC 420

Query: 421 AYTFAATDGLLLPGNPAIGILKYKEKYYTFNSKDAAYSFAENPEHYIDIVREKAKKNTEL 480
           AYTFAATDGLLLPGNPAIGILKYKEKYYTFNSKDAAYSFAENPEHYIDIVREKAKKNTEL
Sbjct: 421 AYTFAATDGLLLPGNPAIGILKYKEKYYTFNSKDAAYSFAENPEHYIDIVREKAKKNTEL 480

Query: 481 IQLLELHQQFETFIPYSQV 499
           IQLLELHQQFETFIPYSQ+
Sbjct: 481 IQLLELHQQFETFIPYSQM 499


>gi|4504919 keratin 8 [Homo sapiens]
          Length = 483

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 59/224 (26%), Positives = 90/224 (40%), Gaps = 26/224 (11%)

Query: 88  DMNYTNRVEFLEEHHRVLESRLGSVTREITDNRACAKEELESLYRKI--ISYVLLRSGLG 145
           D  Y N+VE        LESRL  +T EI   R   +EE+  L  +I   S VL      
Sbjct: 201 DEAYMNKVE--------LESRLEGLTDEINFLRQLYEEEIRELQSQISDTSVVLSMDNSR 252

Query: 146 SPTDIKTVREVTAALQSVFPQAELGTFLTLSKKDKERQL------KELTMIVTGIRLFNR 199
           S      + EV A  + +  ++          K +E Q        +L    T I   NR
Sbjct: 253 SLDMDSIIAEVKAQYEDIANRSRAEAESMYQIKYEELQSLAGKHGDDLRRTKTEISEMNR 312

Query: 200 DCGK---GGEGIDDLPAVLHVAIPATMQHIDYQLETARSQVYRYTAILEKAANDPLMRAE 256
           +  +     EG+    A L  AI    Q  +  ++ A +++    A L++A  D  M  +
Sbjct: 313 NISRLQAEIEGLKGQRASLEAAIADAEQRGELAIKDANAKLSELEAALQRAKQD--MARQ 370

Query: 257 LQPYM----LKEAL-YNIRQYEVFLQIILSDIITGAQEVEMMTK 295
           L+ Y     +K AL   I  Y   L+   S + +G Q + + TK
Sbjct: 371 LREYQELMNVKLALDIEIATYRKLLEGEESRLESGMQNMSIHTK 414


>gi|237858799 adenylate kinase domain containing 1 isoform 1 [Homo
           sapiens]
          Length = 1911

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)

Query: 430 LLLPGNPAIGILKYKEKYYTFNSKDAAYSFAENPEHYI 467
           +L PGN      KY+EK Y F+S +A   F E+PE Y+
Sbjct: 945 ILQPGNTEEAA-KYREKIYYFSSAEAKEKFLEHPEDYV 981


>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
          Length = 1411

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 22/202 (10%)

Query: 10  IRSIIREIGQECAAHGEIVSETLIAFMVKAVVLDPSNGFNMDRTLMKSDVQNLVKLCMTR 69
           + + + E+  +     E VS+  I    K  +L  +      +T  ++D+QN +      
Sbjct: 619 LETSVNELNSQLNESKEKVSQLDIQIKAKTELLLSAEAA---KTAQRADLQNHLDTAQNA 675

Query: 70  LLDTKNPSLDTIKMQVYFDMNYTNRVEFLEEHHRVLESRLGSVTREITDNRACAKEELES 129
           L D K   L+ I  Q+      T +++  +EH   LES L     +         EELE 
Sbjct: 676 LQD-KQQELNKITTQLD---QVTAKLQDKQEHCSQLESHLKEYKEKYLSLEQ-KTEELEG 730

Query: 130 LYRKIISYVLLRSGLGSPTDIKTVREVTAALQSVFPQAELGTFLTLSKKDKERQLKELTM 189
             +K+ +  L         ++K  +E   ALQ +  Q +L T L L   +  +QL+    
Sbjct: 731 QIKKLEADSL---------EVKASKE--QALQDLQQQRQLNTDLELRATELSKQLEMEKE 779

Query: 190 IVTGIRLFNRDCGKGGEGIDDL 211
           IV+  RL   D  K  E ++ +
Sbjct: 780 IVSSTRL---DLQKKSEALESI 798


>gi|7657138 golgi integral membrane protein 4 [Homo sapiens]
          Length = 696

 Score = 34.3 bits (77), Expect = 0.27
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 3/61 (4%)

Query: 262 LKEALYNIRQYEVFLQIILSDIITGAQEVEMMTKQLGAHLEQLKMTI---KSKIAVPTSQ 318
           LKE +YN+R+    L+    DI T  Q+V+   K L +  EQL +T+   KS +A   +Q
Sbjct: 171 LKETVYNLREENRQLRKAHQDIHTQLQDVKQQHKNLLSEHEQLVVTLEDHKSALAAAQTQ 230

Query: 319 V 319
           V
Sbjct: 231 V 231


>gi|54112429 dedicator of cytokinesis 7 [Homo sapiens]
          Length = 2109

 Score = 33.1 bits (74), Expect = 0.61
 Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 16/95 (16%)

Query: 296  QLGAHLEQLKMTIKSKIA--VPTSQVFPIFIALSTLWTSLQDETIVVGVLSNLFTHIQPF 353
            ++G +  ++KM +   ++  V TSQ F              +E  +   L  + T+ +  
Sbjct: 1554 EIGNNFARVKMQVTMSLSSLVGTSQNF--------------NEEFLRRSLKTILTYAEED 1599

Query: 354  LGAHELYFPERVMQCHLNGATVKTDVCRMKEHMED 388
            L   E  FP++V     N   + +D  +MKEH ED
Sbjct: 1600 LELRETTFPDQVQDLVFNLHMILSDTVKMKEHQED 1634


>gi|13699824 kinesin family member 11 [Homo sapiens]
          Length = 1056

 Score = 32.7 bits (73), Expect = 0.79
 Identities = 56/284 (19%), Positives = 105/284 (36%), Gaps = 41/284 (14%)

Query: 56  KSDVQNLVKLCMTRLLDTKNPSLDTIKMQVYFDMNYTNRVEFLEEHHRVLESRLGSVTRE 115
           KSD+QN      T+ L+T    L   K+Q+  +   T+ +E  EE      S+L +   E
Sbjct: 451 KSDLQN-----KTQELETTQKHLQETKLQLVKEEYITSALESTEEKLHDAASKLLNTVEE 505

Query: 116 ITDNRACAKEELESLYRKIISYVLLRSGLGSPTD-IKTVREVTAALQSVFPQAELGTFLT 174
            T +                      SGL S  D  K V +  A  Q +F +     F  
Sbjct: 506 TTKD---------------------VSGLHSKLDRKKAVDQHNAEAQDIFGKNLNSLFNN 544

Query: 175 LSKKDKERQLKELTMIVTGIRLFNRDCGKGGEGIDDLPAVLHVAIPATMQHIDYQLETAR 234
           + +  K+   K+  M+     LF          +D +  V   ++ +  +++   +    
Sbjct: 545 MEELIKDGSSKQKAMLEVHKTLFGNLLSSSVSALDTITTVALGSLTSIPENVSTHVSQIF 604

Query: 235 SQVYRYTAILEKAANDPLMRAELQPYMLKEALYNIRQYEVFLQIILSDIITGAQEVEMMT 294
           + + +  ++   AA    +  EL   +  + L +       L++ILS  +    ++    
Sbjct: 605 NMILKEQSL---AAESKTVLQELINVLKTDLLSS-------LEMILSPTVVSILKINSQL 654

Query: 295 KQLGAHLEQLKMTIKSKIAVPTSQVFPIFIALSTLWTSLQDETI 338
           K    H+ +  +T+  KI     ++      L      LQ+ TI
Sbjct: 655 K----HIFKTSLTVADKIEDQKKELDGFLSILCNNLHELQENTI 694


>gi|157426887 dedicator of cytokinesis 6 [Homo sapiens]
          Length = 2047

 Score = 32.7 bits (73), Expect = 0.79
 Identities = 15/46 (32%), Positives = 23/46 (50%)

Query: 343  LSNLFTHIQPFLGAHELYFPERVMQCHLNGATVKTDVCRMKEHMED 388
            L  + T+ +  +G  +  F E+V     N   + TD  +MKEH ED
Sbjct: 1529 LKTILTYAEEDMGLRDSTFAEQVQDLMFNLHMILTDTVKMKEHQED 1574


>gi|15451914 BAI1-associated protein 3 [Homo sapiens]
          Length = 1187

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 17/45 (37%), Positives = 24/45 (53%)

Query: 120 RACAKEELESLYRKIISYVLLRSGLGSPTDIKTVREVTAALQSVF 164
           RA A EE+E LY + +  VL R+G   P  +     + + LQ VF
Sbjct: 129 RALAPEEVEMLYEEALYTVLYRAGTMGPDQVDDEEALLSYLQQVF 173


>gi|71061468 centromere protein E [Homo sapiens]
          Length = 2701

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 74/344 (21%), Positives = 144/344 (41%), Gaps = 50/344 (14%)

Query: 4   TQAESVIRSIIREIGQECAAHGEIVSETL-----IAFMVKAVVLDPSNGFNMDRTLMKSD 58
           T+   +  +++REI +   +  ++ S TL     I +     +L+  N    +   +++D
Sbjct: 448 TKTHKLSINLLREIDESVCSESDVFSNTLDTLSEIEWNPATKLLNQEN-IESELNSLRAD 506

Query: 59  VQNLV---------KLCMTRLLDTKNPSLDTIK-----------MQVYFDM-NYTNRVEF 97
             NLV         K  M   L  KN  LD  +           MQ+  ++ N  N V+ 
Sbjct: 507 YDNLVLDYEQLRTEKEEMELKLKEKN-DLDEFEALERKTKKDQEMQLIHEISNLKNLVKH 565

Query: 98  LEEHHRVLESRLGS---VTREITDNRACAKEELESLYRKIISYVLLRSGLGSPTDIKTVR 154
            E +++ LE+ L S   + RE  D     +E ++S   + I   L  S L S  D K ++
Sbjct: 566 AEVYNQDLENELSSKVELLREKEDQIKKLQEYIDSQKLENIKMDLSYS-LESIEDPKQMK 624

Query: 155 EVTAALQSVFPQAEL-GTFLTLSKKDKERQLKELTMIVTGIRLFNRDCGKGGEGIDDLPA 213
           +     ++V   A+    FL     + + ++KEL    T  +    D       ++    
Sbjct: 625 QTLFDAETVALDAKRESAFLRSENLELKEKMKELA---TTYKQMENDIQLYQSQLE---- 677

Query: 214 VLHVAIPATMQHIDYQLETARSQVYRYTAILE-KAANDPLMRAELQPYML---KEALYNI 269
               A       ++ +L++A +++ + T++++ K   D L   EL+  +    KE    +
Sbjct: 678 ----AKKKMQVDLEKELQSAFNEITKLTSLIDGKVPKDLLCNLELEGKITDLQKELNKEV 733

Query: 270 RQYEVFLQ--IILSDIITGAQEVEMMTKQLGAHLEQLKMTIKSK 311
            + E   +  I+LS++ +   EVE + K++    E+L +    K
Sbjct: 734 EENEALREEVILLSELKSLPSEVERLRKEIQDKSEELHIITSEK 777


>gi|41872631 fatty acid synthase [Homo sapiens]
          Length = 2511

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 13/72 (18%)

Query: 330  WTSLQDETIVVGVLSNLFTHIQPFLGAHELYFPERVMQCHLNGATVKTDVCRMKEHMEDR 389
            W S  D  + + +L +           H LY P RV   H++ AT +  +      ++D+
Sbjct: 1026 WVSFMDTMLQMSILGS---------AKHGLYLPTRVTAIHIDPATHRQKLYT----LQDK 1072

Query: 390  VNVADFRKLEWL 401
              VAD     WL
Sbjct: 1073 AQVADVVVSRWL 1084


>gi|164420685 homeodomain interacting protein kinase 2 isoform 1
           [Homo sapiens]
          Length = 1198

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 10/96 (10%)

Query: 357 HELYFPERVMQCHLNGATVKTDVCRMKEHMEDRVNVADFRKLEWLFPETTAN----FDKL 412
           H L FP      H+       ++C+ + +M D VN +    +  + P T+ N    F+  
Sbjct: 531 HLLDFPHST---HVKSCFQNMEICKRRVNMYDTVNQSKTPFITHVAPSTSTNLTMTFNNQ 587

Query: 413 LIQYRGFCAYTFAATDGLLLPGNPAIGILKYKEKYY 448
           L         + +AT  L    NP + IL Y    Y
Sbjct: 588 LTTVHNQAPSSTSATISL---ANPEVSILNYPSTLY 620


>gi|8922633 high-mobility group 20A [Homo sapiens]
          Length = 347

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 40/164 (24%), Positives = 64/164 (39%), Gaps = 20/164 (12%)

Query: 162 SVFPQAELGTFLTLSKKDKERQLKELTMI--VTGIRLFNR---DCGKGGEGIDDLPAVLH 216
           S  P  E   +L  + +DKER +KEL         ++F+R   D  KG     D      
Sbjct: 142 SKLPPEEKQRYLDEADRDKERYMKELEQYQKTEAYKVFSRKTQDRQKGKSHRQD------ 195

Query: 217 VAIPATMQHIDYQLETARSQVYRYTAILEKAANDPLMRAELQPYMLKEALYNIRQYEVFL 276
            A  AT  H + + E     V+      E+  N    R E +   L+++     +    L
Sbjct: 196 AARQATHDH-EKETEVKERSVFDIPIFTEEFLNHSKAR-EAELRQLRKSNMEFEERNAAL 253

Query: 277 QIILSDIITGAQEVEMMTKQ-------LGAHLEQLKMTIKSKIA 313
           Q  +  + T  +++E+   Q       L  HLE L+  + S  A
Sbjct: 254 QKHVESMRTAVEKLEVDVIQERSRNTVLQQHLETLRQVLTSSFA 297


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.136    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,835,714
Number of Sequences: 37866
Number of extensions: 682928
Number of successful extensions: 1707
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1696
Number of HSP's gapped (non-prelim): 20
length of query: 505
length of database: 18,247,518
effective HSP length: 107
effective length of query: 398
effective length of database: 14,195,856
effective search space: 5649950688
effective search space used: 5649950688
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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