BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|30520339 hypothetical protein LOC154313 isoform 2 [Homo sapiens] (505 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|30520339 hypothetical protein LOC154313 isoform 2 [Homo sapiens] 996 0.0 gi|72534780 hypothetical protein LOC154313 isoform 1 [Homo sapiens] 984 0.0 gi|4504919 keratin 8 [Homo sapiens] 35 0.12 gi|237858799 adenylate kinase domain containing 1 isoform 1 [Hom... 35 0.21 gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] 35 0.21 gi|7657138 golgi integral membrane protein 4 [Homo sapiens] 34 0.27 gi|54112429 dedicator of cytokinesis 7 [Homo sapiens] 33 0.61 gi|13699824 kinesin family member 11 [Homo sapiens] 33 0.79 gi|157426887 dedicator of cytokinesis 6 [Homo sapiens] 33 0.79 gi|15451914 BAI1-associated protein 3 [Homo sapiens] 32 1.0 gi|71061468 centromere protein E [Homo sapiens] 32 1.4 gi|41872631 fatty acid synthase [Homo sapiens] 30 3.9 gi|164420685 homeodomain interacting protein kinase 2 isoform 1 ... 30 6.7 gi|8922633 high-mobility group 20A [Homo sapiens] 29 8.8 >gi|30520339 hypothetical protein LOC154313 isoform 2 [Homo sapiens] Length = 505 Score = 996 bits (2575), Expect = 0.0 Identities = 505/505 (100%), Positives = 505/505 (100%) Query: 1 MPPTQAESVIRSIIREIGQECAAHGEIVSETLIAFMVKAVVLDPSNGFNMDRTLMKSDVQ 60 MPPTQAESVIRSIIREIGQECAAHGEIVSETLIAFMVKAVVLDPSNGFNMDRTLMKSDVQ Sbjct: 1 MPPTQAESVIRSIIREIGQECAAHGEIVSETLIAFMVKAVVLDPSNGFNMDRTLMKSDVQ 60 Query: 61 NLVKLCMTRLLDTKNPSLDTIKMQVYFDMNYTNRVEFLEEHHRVLESRLGSVTREITDNR 120 NLVKLCMTRLLDTKNPSLDTIKMQVYFDMNYTNRVEFLEEHHRVLESRLGSVTREITDNR Sbjct: 61 NLVKLCMTRLLDTKNPSLDTIKMQVYFDMNYTNRVEFLEEHHRVLESRLGSVTREITDNR 120 Query: 121 ACAKEELESLYRKIISYVLLRSGLGSPTDIKTVREVTAALQSVFPQAELGTFLTLSKKDK 180 ACAKEELESLYRKIISYVLLRSGLGSPTDIKTVREVTAALQSVFPQAELGTFLTLSKKDK Sbjct: 121 ACAKEELESLYRKIISYVLLRSGLGSPTDIKTVREVTAALQSVFPQAELGTFLTLSKKDK 180 Query: 181 ERQLKELTMIVTGIRLFNRDCGKGGEGIDDLPAVLHVAIPATMQHIDYQLETARSQVYRY 240 ERQLKELTMIVTGIRLFNRDCGKGGEGIDDLPAVLHVAIPATMQHIDYQLETARSQVYRY Sbjct: 181 ERQLKELTMIVTGIRLFNRDCGKGGEGIDDLPAVLHVAIPATMQHIDYQLETARSQVYRY 240 Query: 241 TAILEKAANDPLMRAELQPYMLKEALYNIRQYEVFLQIILSDIITGAQEVEMMTKQLGAH 300 TAILEKAANDPLMRAELQPYMLKEALYNIRQYEVFLQIILSDIITGAQEVEMMTKQLGAH Sbjct: 241 TAILEKAANDPLMRAELQPYMLKEALYNIRQYEVFLQIILSDIITGAQEVEMMTKQLGAH 300 Query: 301 LEQLKMTIKSKIAVPTSQVFPIFIALSTLWTSLQDETIVVGVLSNLFTHIQPFLGAHELY 360 LEQLKMTIKSKIAVPTSQVFPIFIALSTLWTSLQDETIVVGVLSNLFTHIQPFLGAHELY Sbjct: 301 LEQLKMTIKSKIAVPTSQVFPIFIALSTLWTSLQDETIVVGVLSNLFTHIQPFLGAHELY 360 Query: 361 FPERVMQCHLNGATVKTDVCRMKEHMEDRVNVADFRKLEWLFPETTANFDKLLIQYRGFC 420 FPERVMQCHLNGATVKTDVCRMKEHMEDRVNVADFRKLEWLFPETTANFDKLLIQYRGFC Sbjct: 361 FPERVMQCHLNGATVKTDVCRMKEHMEDRVNVADFRKLEWLFPETTANFDKLLIQYRGFC 420 Query: 421 AYTFAATDGLLLPGNPAIGILKYKEKYYTFNSKDAAYSFAENPEHYIDIVREKAKKNTEL 480 AYTFAATDGLLLPGNPAIGILKYKEKYYTFNSKDAAYSFAENPEHYIDIVREKAKKNTEL Sbjct: 421 AYTFAATDGLLLPGNPAIGILKYKEKYYTFNSKDAAYSFAENPEHYIDIVREKAKKNTEL 480 Query: 481 IQLLELHQQFETFIPYSQVSRVNIL 505 IQLLELHQQFETFIPYSQVSRVNIL Sbjct: 481 IQLLELHQQFETFIPYSQVSRVNIL 505 >gi|72534780 hypothetical protein LOC154313 isoform 1 [Homo sapiens] Length = 622 Score = 984 bits (2545), Expect = 0.0 Identities = 498/499 (99%), Positives = 499/499 (100%) Query: 1 MPPTQAESVIRSIIREIGQECAAHGEIVSETLIAFMVKAVVLDPSNGFNMDRTLMKSDVQ 60 MPPTQAESVIRSIIREIGQECAAHGEIVSETLIAFMVKAVVLDPSNGFNMDRTLMKSDVQ Sbjct: 1 MPPTQAESVIRSIIREIGQECAAHGEIVSETLIAFMVKAVVLDPSNGFNMDRTLMKSDVQ 60 Query: 61 NLVKLCMTRLLDTKNPSLDTIKMQVYFDMNYTNRVEFLEEHHRVLESRLGSVTREITDNR 120 NLVKLCMTRLLDTKNPSLDTIKMQVYFDMNYTNRVEFLEEHHRVLESRLGSVTREITDNR Sbjct: 61 NLVKLCMTRLLDTKNPSLDTIKMQVYFDMNYTNRVEFLEEHHRVLESRLGSVTREITDNR 120 Query: 121 ACAKEELESLYRKIISYVLLRSGLGSPTDIKTVREVTAALQSVFPQAELGTFLTLSKKDK 180 ACAKEELESLYRKIISYVLLRSGLGSPTDIKTVREVTAALQSVFPQAELGTFLTLSKKDK Sbjct: 121 ACAKEELESLYRKIISYVLLRSGLGSPTDIKTVREVTAALQSVFPQAELGTFLTLSKKDK 180 Query: 181 ERQLKELTMIVTGIRLFNRDCGKGGEGIDDLPAVLHVAIPATMQHIDYQLETARSQVYRY 240 ERQLKELTMIVTGIRLFNRDCGKGGEGIDDLPAVLHVAIPATMQHIDYQLETARSQVYRY Sbjct: 181 ERQLKELTMIVTGIRLFNRDCGKGGEGIDDLPAVLHVAIPATMQHIDYQLETARSQVYRY 240 Query: 241 TAILEKAANDPLMRAELQPYMLKEALYNIRQYEVFLQIILSDIITGAQEVEMMTKQLGAH 300 TAILEKAANDPLMRAELQPYMLKEALYNIRQYEVFLQIILSDIITGAQEVEMMTKQLGAH Sbjct: 241 TAILEKAANDPLMRAELQPYMLKEALYNIRQYEVFLQIILSDIITGAQEVEMMTKQLGAH 300 Query: 301 LEQLKMTIKSKIAVPTSQVFPIFIALSTLWTSLQDETIVVGVLSNLFTHIQPFLGAHELY 360 LEQLKMTIKSKIAVPTSQVFPIFIALSTLWTSLQDETIVVGVLSNLFTHIQPFLGAHELY Sbjct: 301 LEQLKMTIKSKIAVPTSQVFPIFIALSTLWTSLQDETIVVGVLSNLFTHIQPFLGAHELY 360 Query: 361 FPERVMQCHLNGATVKTDVCRMKEHMEDRVNVADFRKLEWLFPETTANFDKLLIQYRGFC 420 FPERVMQCHLNGATVKTDVCRMKEHMEDRVNVADFRKLEWLFPETTANFDKLLIQYRGFC Sbjct: 361 FPERVMQCHLNGATVKTDVCRMKEHMEDRVNVADFRKLEWLFPETTANFDKLLIQYRGFC 420 Query: 421 AYTFAATDGLLLPGNPAIGILKYKEKYYTFNSKDAAYSFAENPEHYIDIVREKAKKNTEL 480 AYTFAATDGLLLPGNPAIGILKYKEKYYTFNSKDAAYSFAENPEHYIDIVREKAKKNTEL Sbjct: 421 AYTFAATDGLLLPGNPAIGILKYKEKYYTFNSKDAAYSFAENPEHYIDIVREKAKKNTEL 480 Query: 481 IQLLELHQQFETFIPYSQV 499 IQLLELHQQFETFIPYSQ+ Sbjct: 481 IQLLELHQQFETFIPYSQM 499 >gi|4504919 keratin 8 [Homo sapiens] Length = 483 Score = 35.4 bits (80), Expect = 0.12 Identities = 59/224 (26%), Positives = 90/224 (40%), Gaps = 26/224 (11%) Query: 88 DMNYTNRVEFLEEHHRVLESRLGSVTREITDNRACAKEELESLYRKI--ISYVLLRSGLG 145 D Y N+VE LESRL +T EI R +EE+ L +I S VL Sbjct: 201 DEAYMNKVE--------LESRLEGLTDEINFLRQLYEEEIRELQSQISDTSVVLSMDNSR 252 Query: 146 SPTDIKTVREVTAALQSVFPQAELGTFLTLSKKDKERQL------KELTMIVTGIRLFNR 199 S + EV A + + ++ K +E Q +L T I NR Sbjct: 253 SLDMDSIIAEVKAQYEDIANRSRAEAESMYQIKYEELQSLAGKHGDDLRRTKTEISEMNR 312 Query: 200 DCGK---GGEGIDDLPAVLHVAIPATMQHIDYQLETARSQVYRYTAILEKAANDPLMRAE 256 + + EG+ A L AI Q + ++ A +++ A L++A D M + Sbjct: 313 NISRLQAEIEGLKGQRASLEAAIADAEQRGELAIKDANAKLSELEAALQRAKQD--MARQ 370 Query: 257 LQPYM----LKEAL-YNIRQYEVFLQIILSDIITGAQEVEMMTK 295 L+ Y +K AL I Y L+ S + +G Q + + TK Sbjct: 371 LREYQELMNVKLALDIEIATYRKLLEGEESRLESGMQNMSIHTK 414 >gi|237858799 adenylate kinase domain containing 1 isoform 1 [Homo sapiens] Length = 1911 Score = 34.7 bits (78), Expect = 0.21 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Query: 430 LLLPGNPAIGILKYKEKYYTFNSKDAAYSFAENPEHYI 467 +L PGN KY+EK Y F+S +A F E+PE Y+ Sbjct: 945 ILQPGNTEEAA-KYREKIYYFSSAEAKEKFLEHPEDYV 981 >gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] Length = 1411 Score = 34.7 bits (78), Expect = 0.21 Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 22/202 (10%) Query: 10 IRSIIREIGQECAAHGEIVSETLIAFMVKAVVLDPSNGFNMDRTLMKSDVQNLVKLCMTR 69 + + + E+ + E VS+ I K +L + +T ++D+QN + Sbjct: 619 LETSVNELNSQLNESKEKVSQLDIQIKAKTELLLSAEAA---KTAQRADLQNHLDTAQNA 675 Query: 70 LLDTKNPSLDTIKMQVYFDMNYTNRVEFLEEHHRVLESRLGSVTREITDNRACAKEELES 129 L D K L+ I Q+ T +++ +EH LES L + EELE Sbjct: 676 LQD-KQQELNKITTQLD---QVTAKLQDKQEHCSQLESHLKEYKEKYLSLEQ-KTEELEG 730 Query: 130 LYRKIISYVLLRSGLGSPTDIKTVREVTAALQSVFPQAELGTFLTLSKKDKERQLKELTM 189 +K+ + L ++K +E ALQ + Q +L T L L + +QL+ Sbjct: 731 QIKKLEADSL---------EVKASKE--QALQDLQQQRQLNTDLELRATELSKQLEMEKE 779 Query: 190 IVTGIRLFNRDCGKGGEGIDDL 211 IV+ RL D K E ++ + Sbjct: 780 IVSSTRL---DLQKKSEALESI 798 >gi|7657138 golgi integral membrane protein 4 [Homo sapiens] Length = 696 Score = 34.3 bits (77), Expect = 0.27 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 3/61 (4%) Query: 262 LKEALYNIRQYEVFLQIILSDIITGAQEVEMMTKQLGAHLEQLKMTI---KSKIAVPTSQ 318 LKE +YN+R+ L+ DI T Q+V+ K L + EQL +T+ KS +A +Q Sbjct: 171 LKETVYNLREENRQLRKAHQDIHTQLQDVKQQHKNLLSEHEQLVVTLEDHKSALAAAQTQ 230 Query: 319 V 319 V Sbjct: 231 V 231 >gi|54112429 dedicator of cytokinesis 7 [Homo sapiens] Length = 2109 Score = 33.1 bits (74), Expect = 0.61 Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 16/95 (16%) Query: 296 QLGAHLEQLKMTIKSKIA--VPTSQVFPIFIALSTLWTSLQDETIVVGVLSNLFTHIQPF 353 ++G + ++KM + ++ V TSQ F +E + L + T+ + Sbjct: 1554 EIGNNFARVKMQVTMSLSSLVGTSQNF--------------NEEFLRRSLKTILTYAEED 1599 Query: 354 LGAHELYFPERVMQCHLNGATVKTDVCRMKEHMED 388 L E FP++V N + +D +MKEH ED Sbjct: 1600 LELRETTFPDQVQDLVFNLHMILSDTVKMKEHQED 1634 >gi|13699824 kinesin family member 11 [Homo sapiens] Length = 1056 Score = 32.7 bits (73), Expect = 0.79 Identities = 56/284 (19%), Positives = 105/284 (36%), Gaps = 41/284 (14%) Query: 56 KSDVQNLVKLCMTRLLDTKNPSLDTIKMQVYFDMNYTNRVEFLEEHHRVLESRLGSVTRE 115 KSD+QN T+ L+T L K+Q+ + T+ +E EE S+L + E Sbjct: 451 KSDLQN-----KTQELETTQKHLQETKLQLVKEEYITSALESTEEKLHDAASKLLNTVEE 505 Query: 116 ITDNRACAKEELESLYRKIISYVLLRSGLGSPTD-IKTVREVTAALQSVFPQAELGTFLT 174 T + SGL S D K V + A Q +F + F Sbjct: 506 TTKD---------------------VSGLHSKLDRKKAVDQHNAEAQDIFGKNLNSLFNN 544 Query: 175 LSKKDKERQLKELTMIVTGIRLFNRDCGKGGEGIDDLPAVLHVAIPATMQHIDYQLETAR 234 + + K+ K+ M+ LF +D + V ++ + +++ + Sbjct: 545 MEELIKDGSSKQKAMLEVHKTLFGNLLSSSVSALDTITTVALGSLTSIPENVSTHVSQIF 604 Query: 235 SQVYRYTAILEKAANDPLMRAELQPYMLKEALYNIRQYEVFLQIILSDIITGAQEVEMMT 294 + + + ++ AA + EL + + L + L++ILS + ++ Sbjct: 605 NMILKEQSL---AAESKTVLQELINVLKTDLLSS-------LEMILSPTVVSILKINSQL 654 Query: 295 KQLGAHLEQLKMTIKSKIAVPTSQVFPIFIALSTLWTSLQDETI 338 K H+ + +T+ KI ++ L LQ+ TI Sbjct: 655 K----HIFKTSLTVADKIEDQKKELDGFLSILCNNLHELQENTI 694 >gi|157426887 dedicator of cytokinesis 6 [Homo sapiens] Length = 2047 Score = 32.7 bits (73), Expect = 0.79 Identities = 15/46 (32%), Positives = 23/46 (50%) Query: 343 LSNLFTHIQPFLGAHELYFPERVMQCHLNGATVKTDVCRMKEHMED 388 L + T+ + +G + F E+V N + TD +MKEH ED Sbjct: 1529 LKTILTYAEEDMGLRDSTFAEQVQDLMFNLHMILTDTVKMKEHQED 1574 >gi|15451914 BAI1-associated protein 3 [Homo sapiens] Length = 1187 Score = 32.3 bits (72), Expect = 1.0 Identities = 17/45 (37%), Positives = 24/45 (53%) Query: 120 RACAKEELESLYRKIISYVLLRSGLGSPTDIKTVREVTAALQSVF 164 RA A EE+E LY + + VL R+G P + + + LQ VF Sbjct: 129 RALAPEEVEMLYEEALYTVLYRAGTMGPDQVDDEEALLSYLQQVF 173 >gi|71061468 centromere protein E [Homo sapiens] Length = 2701 Score = 32.0 bits (71), Expect = 1.4 Identities = 74/344 (21%), Positives = 144/344 (41%), Gaps = 50/344 (14%) Query: 4 TQAESVIRSIIREIGQECAAHGEIVSETL-----IAFMVKAVVLDPSNGFNMDRTLMKSD 58 T+ + +++REI + + ++ S TL I + +L+ N + +++D Sbjct: 448 TKTHKLSINLLREIDESVCSESDVFSNTLDTLSEIEWNPATKLLNQEN-IESELNSLRAD 506 Query: 59 VQNLV---------KLCMTRLLDTKNPSLDTIK-----------MQVYFDM-NYTNRVEF 97 NLV K M L KN LD + MQ+ ++ N N V+ Sbjct: 507 YDNLVLDYEQLRTEKEEMELKLKEKN-DLDEFEALERKTKKDQEMQLIHEISNLKNLVKH 565 Query: 98 LEEHHRVLESRLGS---VTREITDNRACAKEELESLYRKIISYVLLRSGLGSPTDIKTVR 154 E +++ LE+ L S + RE D +E ++S + I L S L S D K ++ Sbjct: 566 AEVYNQDLENELSSKVELLREKEDQIKKLQEYIDSQKLENIKMDLSYS-LESIEDPKQMK 624 Query: 155 EVTAALQSVFPQAEL-GTFLTLSKKDKERQLKELTMIVTGIRLFNRDCGKGGEGIDDLPA 213 + ++V A+ FL + + ++KEL T + D ++ Sbjct: 625 QTLFDAETVALDAKRESAFLRSENLELKEKMKELA---TTYKQMENDIQLYQSQLE---- 677 Query: 214 VLHVAIPATMQHIDYQLETARSQVYRYTAILE-KAANDPLMRAELQPYML---KEALYNI 269 A ++ +L++A +++ + T++++ K D L EL+ + KE + Sbjct: 678 ----AKKKMQVDLEKELQSAFNEITKLTSLIDGKVPKDLLCNLELEGKITDLQKELNKEV 733 Query: 270 RQYEVFLQ--IILSDIITGAQEVEMMTKQLGAHLEQLKMTIKSK 311 + E + I+LS++ + EVE + K++ E+L + K Sbjct: 734 EENEALREEVILLSELKSLPSEVERLRKEIQDKSEELHIITSEK 777 >gi|41872631 fatty acid synthase [Homo sapiens] Length = 2511 Score = 30.4 bits (67), Expect = 3.9 Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 13/72 (18%) Query: 330 WTSLQDETIVVGVLSNLFTHIQPFLGAHELYFPERVMQCHLNGATVKTDVCRMKEHMEDR 389 W S D + + +L + H LY P RV H++ AT + + ++D+ Sbjct: 1026 WVSFMDTMLQMSILGS---------AKHGLYLPTRVTAIHIDPATHRQKLYT----LQDK 1072 Query: 390 VNVADFRKLEWL 401 VAD WL Sbjct: 1073 AQVADVVVSRWL 1084 >gi|164420685 homeodomain interacting protein kinase 2 isoform 1 [Homo sapiens] Length = 1198 Score = 29.6 bits (65), Expect = 6.7 Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 10/96 (10%) Query: 357 HELYFPERVMQCHLNGATVKTDVCRMKEHMEDRVNVADFRKLEWLFPETTAN----FDKL 412 H L FP H+ ++C+ + +M D VN + + + P T+ N F+ Sbjct: 531 HLLDFPHST---HVKSCFQNMEICKRRVNMYDTVNQSKTPFITHVAPSTSTNLTMTFNNQ 587 Query: 413 LIQYRGFCAYTFAATDGLLLPGNPAIGILKYKEKYY 448 L + +AT L NP + IL Y Y Sbjct: 588 LTTVHNQAPSSTSATISL---ANPEVSILNYPSTLY 620 >gi|8922633 high-mobility group 20A [Homo sapiens] Length = 347 Score = 29.3 bits (64), Expect = 8.8 Identities = 40/164 (24%), Positives = 64/164 (39%), Gaps = 20/164 (12%) Query: 162 SVFPQAELGTFLTLSKKDKERQLKELTMI--VTGIRLFNR---DCGKGGEGIDDLPAVLH 216 S P E +L + +DKER +KEL ++F+R D KG D Sbjct: 142 SKLPPEEKQRYLDEADRDKERYMKELEQYQKTEAYKVFSRKTQDRQKGKSHRQD------ 195 Query: 217 VAIPATMQHIDYQLETARSQVYRYTAILEKAANDPLMRAELQPYMLKEALYNIRQYEVFL 276 A AT H + + E V+ E+ N R E + L+++ + L Sbjct: 196 AARQATHDH-EKETEVKERSVFDIPIFTEEFLNHSKAR-EAELRQLRKSNMEFEERNAAL 253 Query: 277 QIILSDIITGAQEVEMMTKQ-------LGAHLEQLKMTIKSKIA 313 Q + + T +++E+ Q L HLE L+ + S A Sbjct: 254 QKHVESMRTAVEKLEVDVIQERSRNTVLQQHLETLRQVLTSSFA 297 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.321 0.136 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,835,714 Number of Sequences: 37866 Number of extensions: 682928 Number of successful extensions: 1707 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 1696 Number of HSP's gapped (non-prelim): 20 length of query: 505 length of database: 18,247,518 effective HSP length: 107 effective length of query: 398 effective length of database: 14,195,856 effective search space: 5649950688 effective search space used: 5649950688 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.