Guide to the Human Genome
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Name: C6orf165 Sequence: fasta or formatted (505aa) NCBI GI: 30520339
Description:

hypothetical protein LOC154313 isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {622aa} hypothetical protein LOC154313 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         35           2
 C cysteine            1.4          7           1
 D aspartate           4.6         23           2
 E glutamate           7.9         40           2
 F phenylalanine       4.4         22           1
 G glycine             4.2         21           2
 H histidine           2.4         12           2
 I isoleucine          7.1         36           2
 K lysine              5.9         30           2
 L leucine            11.3         57           3
 M methionine          3.4         17           2
 N asparagine          3.8         19           1
 P proline             3.8         19           2
 Q glutamine           5.0         25           2
 R arginine            5.1         26           1
 S serine              5.0         25           1
 T threonine           7.1         36           2
 V valine              6.7         34           2
 W tryptophan          0.4          2           1
 Y tyrosine            3.8         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC154313 isoform 2 
C6orf165              0.988   hypothetical protein LOC154313 isoform 1 
KRT8                  0.010   keratin 8 
AKD1                  0.010   adenylate kinase domain containing 1 isoform 1 [Hom...
EEA1                  0.010   early endosome antigen 1, 162kD 
GOLIM4                0.009   golgi integral membrane protein 4 
DOCK7                 0.008   dedicator of cytokinesis 7 
KIF11                 0.008   kinesin family member 11 
DOCK6                 0.008   dedicator of cytokinesis 6 
BAIAP3                0.007   BAI1-associated protein 3 
CENPE                 0.007   centromere protein E 
FASN                  0.005   fatty acid synthase 
HIPK2                 0.005   homeodomain interacting protein kinase 2 isoform 1 ...
HMG20A                0.004   high-mobility group 20A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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