Guide to the Human Genome
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Name: C7orf63 Sequence: fasta or formatted (923aa) NCBI GI: 236463300
Description:

hypothetical protein LOC79846 isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {941aa} hypothetical protein LOC79846 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         61           2
 C cysteine            2.3         21           2
 D aspartate           4.8         44           2
 E glutamate           7.9         73           2
 F phenylalanine       3.7         34           2
 G glycine             5.0         46           2
 H histidine           1.6         15           1
 I isoleucine          8.3         77           2
 K lysine              9.3         86           3
 L leucine            12.4        114           3
 M methionine          2.0         18           2
 N asparagine          4.4         41           1
 P proline             3.4         31           1
 Q glutamine           5.3         49           2
 R arginine            3.0         28           1
 S serine              6.5         60           5
 T threonine           4.7         43           2
 V valine              5.7         53           2
 W tryptophan          1.1         10           1
 Y tyrosine            2.1         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC79846 isoform 2 
C7orf63               0.994   hypothetical protein LOC79846 isoform 1 
PARP14                0.007   poly (ADP-ribose) polymerase family, member 14 [Hom...
NEK10                 0.006   NIMA-related kinase 10 isoform 3 
ARHGEF18              0.005   Rho/Rac guanine nucleotide exchange factor 18 isofo...
ARHGEF18              0.005   Rho/Rac guanine nucleotide exchange factor 18 isofor...
HSP90AA1              0.004   heat shock 90kDa protein 1, alpha isoform 2 
HSP90AA1              0.004   heat shock 90kDa protein 1, alpha isoform 1 
PKN2                  0.004   protein kinase N2 
MDN1                  0.004   MDN1, midasin homolog 
UNC13C                0.004   unc-13 homolog C 
SYTL2                 0.004   synaptotagmin-like 2 isoform i 
SYTL2                 0.004   synaptotagmin-like 2 isoform g 
C13orf38              0.003   hypothetical protein LOC728591 isoform a 
KIAA2026              0.003   hypothetical protein LOC158358 
CHD9                  0.003   chromodomain helicase DNA binding protein 9 
SYTL2                 0.003   synaptotagmin-like 2 isoform d 
MYH1                  0.003   myosin, heavy chain 1, skeletal muscle, adult [Homo...
C2orf3                0.003   hypothetical protein LOC6936 
PLDN                  0.003   pallidin 
SYAP1                 0.003   SYAP1 protein 
MRPL39                0.003   mitochondrial ribosomal protein L39 isoform b 
MRPL39                0.003   mitochondrial ribosomal protein L39 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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