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Name: KCNJ16 Sequence: fasta or formatted (418aa) NCBI GI: 25777628
Description:

potassium inwardly-rectifying channel J16

Referenced in:

Potassium Channels

Other entries for this name:
alt mRNA [418aa] potassium inwardly-rectifying channel J16
alt mRNA [418aa] potassium inwardly-rectifying channel J16
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         27           2
 C cysteine            2.4         10           1
 D aspartate           5.0         21           1
 E glutamate           5.7         24           2
 F phenylalanine       5.3         22           1
 G glycine             4.8         20           1
 H histidine           3.6         15           2
 I isoleucine          7.4         31           2
 K lysine              4.8         20           1
 L leucine             8.1         34           2
 M methionine          2.2          9           1
 N asparagine          2.9         12           1
 P proline             3.3         14           2
 Q glutamine           2.9         12           2
 R arginine            6.5         27           3
 S serine              7.9         33           2
 T threonine           6.9         29           3
 V valine              7.4         31           2
 W tryptophan          1.7          7           1
 Y tyrosine            4.8         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium inwardly-rectifying channel J16 
KCNJ16                1.000   potassium inwardly-rectifying channel J16 
KCNJ16                1.000   potassium inwardly-rectifying channel J16 
KCNJ4                 0.359   potassium inwardly-rectifying channel J4 
KCNJ4                 0.359   potassium inwardly-rectifying channel J4 
KCNJ2                 0.357   potassium inwardly-rectifying channel J2 
KCNJ12                0.350   potassium inwardly-rectifying channel, subfamily J, ...
LOC100134444          0.347   PREDICTED: similar to thyrotoxic periodic paralysis...
KCNJ14                0.337   potassium inwardly-rectifying channel J14 
KCNJ14                0.337   potassium inwardly-rectifying channel J14 
LOC100131509          0.336   PREDICTED: similar to inward rectifying K+ channel ...
LOC100131509          0.336   PREDICTED: similar to inward rectifying K+ channel ...
LOC100290070          0.336   PREDICTED: hypothetical protein XP_002347768 
KCNJ9                 0.315   potassium inwardly-rectifying channel subfamily J9 [...
KCNJ6                 0.313   potassium inwardly-rectifying channel J6 
KCNJ5                 0.306   potassium inwardly-rectifying channel J5 
KCNJ3                 0.293   potassium inwardly-rectifying channel J3 
KCNJ8                 0.291   potassium inwardly-rectifying channel J8 
KCNJ11                0.280   potassium inwardly-rectifying channel J11 
KCNJ1                 0.272   potassium inwardly-rectifying channel J1 isoform b [...
KCNJ1                 0.272   potassium inwardly-rectifying channel J1 isoform b [...
KCNJ1                 0.272   potassium inwardly-rectifying channel J1 isoform a [H...
KCNJ1                 0.272   potassium inwardly-rectifying channel J1 isoform b ...
KCNJ1                 0.272   potassium inwardly-rectifying channel J1 isoform b [...
KCNJ10                0.243   potassium inwardly-rectifying channel, subfamily J, ...
KCNJ15                0.231   potassium inwardly-rectifying channel J15 
KCNJ15                0.231   potassium inwardly-rectifying channel J15 
KCNJ15                0.231   potassium inwardly-rectifying channel J15 
KCNJ13                0.158   potassium inwardly-rectifying channel J13 
GABRR2                0.005   gamma-aminobutyric acid (GABA) receptor, rho 2 prec...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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