Guide to the Human Genome
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Name: APPL2 Sequence: fasta or formatted (664aa) NCBI GI: 24586663
Description:

adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2

Referenced in:

Rab

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         54           3
 C cysteine            1.4          9           1
 D aspartate           5.1         34           4
 E glutamate           9.3         62           2
 F phenylalanine       3.8         25           2
 G glycine             4.5         30           2
 H histidine           1.4          9           1
 I isoleucine          5.1         34           2
 K lysine              5.6         37           3
 L leucine            10.4         69           3
 M methionine          3.3         22           2
 N asparagine          5.3         35           2
 P proline             3.8         25           1
 Q glutamine           6.9         46           2
 R arginine            4.4         29           2
 S serine              7.2         48           2
 T threonine           5.9         39           3
 V valine              5.7         38           2
 W tryptophan          0.3          2           1
 Y tyrosine            2.6         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   adaptor protein, phosphotyrosine interaction, PH dom... 
APPL1                 0.512   adaptor protein, phosphotyrosine interaction, PH doma...
ACAP2                 0.066   centaurin, beta 2 
ACAP3                 0.062   ArfGAP with coiled-coil, ankyrin repeat and PH doma...
ARHGAP10              0.046   Rho GTPase activating protein 10 
FLJ32810              0.046   Rho-type GTPase-activating protein FLJ32810 
ARHGAP26              0.042   GTPase regulator associated with the focal adhesion...
ARHGAP26              0.042   GTPase regulator associated with the focal adhesion k...
ACAP1                 0.036   centaurin beta1 
OPHN1                 0.032   oligophrenin 1 
ASAP1                 0.024   development and differentiation enhancing factor 1 [...
ASAP2                 0.024   ArfGAP with SH3 domain, ankyrin repeat and PH domai...
ASAP2                 0.024   ArfGAP with SH3 domain, ankyrin repeat and PH domain ...
GULP1                 0.017   GULP, engulfment adaptor PTB domain containing 1 [Hom...
EEA1                  0.013   early endosome antigen 1, 162kD 
DGKK                  0.013   diacylglycerol kinase kappa 
ASAP3                 0.013   ArfGAP with SH3 domain, ankyrin repeat and PH domai...
ASAP3                 0.013   ArfGAP with SH3 domain, ankyrin repeat and PH domain...
GCOM1                 0.010   GRINL1A combined protein isoform 2 
GCOM1                 0.010   GRINL1A combined protein isoform 1 
GCOM1                 0.010   GRINL1A combined protein isoform 8 
GCOM1                 0.010   GRINL1A upstream protein isoform 7 
GOLGB1                0.009   golgi autoantigen, golgin subfamily b, macrogolgin ...
UTP14A                0.009   UTP14, U3 small nucleolar ribonucleoprotein, homolog...
MTHFD2                0.008   methylenetetrahydrofolate dehydrogenase 2 precursor ...
FGD4                  0.008   FYVE, RhoGEF and PH domain containing 4 
DGKD                  0.008   diacylglycerol kinase, delta 130kDa isoform 2 
MAPK8IP1              0.007   mitogen-activated protein kinase 8 interacting protei...
PLEKHH2               0.007   pleckstrin homology domain containing, family H (wi...
CCDC102A              0.007   coiled-coil domain containing 102A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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