Search of human proteins with 118766335

Search of human proteins with 118766335

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|118766335 calcium binding protein 39-like [Homo sapiens]
         (337 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|118766335 calcium binding protein 39-like [Homo sapiens]           660   0.0  
gi|118766350 calcium binding protein 39-like [Homo sapiens]           660   0.0  
gi|195927022 calcium binding protein 39 [Homo sapiens]                535   e-152
gi|195927020 calcium binding protein 39 [Homo sapiens]                535   e-152
gi|7706481 calcium binding protein 39 [Homo sapiens]                  535   e-152
gi|116256481 TNFAIP3 interacting protein 1 [Homo sapiens]              33   0.28 
gi|154354962 inner membrane protein, mitochondrial isoform 2 [Ho...    33   0.28 
gi|169207319 PREDICTED: hypothetical protein [Homo sapiens]            33   0.36 
gi|4758650 kinesin family member 5C [Homo sapiens]                     33   0.36 
gi|27262628 nuclear autoantigenic sperm protein isoform 2 [Homo ...    32   0.62 
gi|27262634 nuclear autoantigenic sperm protein isoform 1 [Homo ...    32   0.62 
gi|27262630 nuclear autoantigenic sperm protein isoform 3 [Homo ...    32   0.62 
gi|21361440 RAB3A interacting protein (rabin3)-like 1 [Homo sapi...    32   0.62 
gi|169207756 PREDICTED: hypothetical protein [Homo sapiens]            31   1.4  
gi|169207046 PREDICTED: hypothetical protein [Homo sapiens]            31   1.4  
gi|4502443 dystonin isoform 1e precursor [Homo sapiens]                31   1.4  
gi|4504063 golgin 97 [Homo sapiens]                                    31   1.4  
gi|154354964 inner membrane protein, mitochondrial isoform 1 [Ho...    31   1.4  
gi|45446749 kinesin family member 5A [Homo sapiens]                    30   2.3  
gi|41281862 RAB3A interacting protein isoform beta 2 [Homo sapiens]    30   2.3  
gi|41281871 RAB3A interacting protein isoform beta 1 [Homo sapiens]    30   2.3  
gi|41281856 RAB3A interacting protein isoform alpha 2 [Homo sapi...    30   2.3  
gi|28274699 RAB3A interacting protein isoform alpha 1 [Homo sapi...    30   2.3  
gi|4504603 interferon, beta 1, fibroblast [Homo sapiens]               30   3.1  
gi|4758648 kinesin family member 5B [Homo sapiens]                     30   3.1  
gi|4503195 cytochrome P450, family 17 [Homo sapiens]                   30   4.0  
gi|215982794 myosin VA isoform 2 [Homo sapiens]                        30   4.0  
gi|215982791 myosin VA isoform 1 [Homo sapiens]                        30   4.0  
gi|197209974 coiled-coil and C2 domain containing 2A isoform a [...    30   4.0  
gi|197209817 coiled-coil and C2 domain containing 2A isoform b [...    30   4.0  

>gi|118766335 calcium binding protein 39-like [Homo sapiens]
          Length = 337

 Score =  660 bits (1704), Expect = 0.0
 Identities = 337/337 (100%), Positives = 337/337 (100%)

Query: 1   MKKMPLFSKSHKNPAEIVKILKDNLAILEKQDKKTDKASEEVSKSLQAMKEILCGTNEKE 60
           MKKMPLFSKSHKNPAEIVKILKDNLAILEKQDKKTDKASEEVSKSLQAMKEILCGTNEKE
Sbjct: 1   MKKMPLFSKSHKNPAEIVKILKDNLAILEKQDKKTDKASEEVSKSLQAMKEILCGTNEKE 60

Query: 61  PPTEAVAQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNILRRQIGTRSPTVEYIS 120
           PPTEAVAQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNILRRQIGTRSPTVEYIS
Sbjct: 61  PPTEAVAQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNILRRQIGTRSPTVEYIS 120

Query: 121 AHPHILFMLLKGYEAPQIALRCGIMLRECIRHEPLAKIILFSNQFRDFFKYVELSTFDIA 180
           AHPHILFMLLKGYEAPQIALRCGIMLRECIRHEPLAKIILFSNQFRDFFKYVELSTFDIA
Sbjct: 121 AHPHILFMLLKGYEAPQIALRCGIMLRECIRHEPLAKIILFSNQFRDFFKYVELSTFDIA 180

Query: 181 SDAFATFKDLLTRHKVLVADFLEQNYDTIFEDYEKLLQSENYVTKRQSLKLLGELILDRH 240
           SDAFATFKDLLTRHKVLVADFLEQNYDTIFEDYEKLLQSENYVTKRQSLKLLGELILDRH
Sbjct: 181 SDAFATFKDLLTRHKVLVADFLEQNYDTIFEDYEKLLQSENYVTKRQSLKLLGELILDRH 240

Query: 241 NFAIMTKYISKPENLKLMMNLLRDKSPNIQFEAFHVFKVFVASPHKTQPIVEILLKNQPK 300
           NFAIMTKYISKPENLKLMMNLLRDKSPNIQFEAFHVFKVFVASPHKTQPIVEILLKNQPK
Sbjct: 241 NFAIMTKYISKPENLKLMMNLLRDKSPNIQFEAFHVFKVFVASPHKTQPIVEILLKNQPK 300

Query: 301 LIEFLSSFQKERTDDEQFADEKNYLIKQIRDLKKTAP 337
           LIEFLSSFQKERTDDEQFADEKNYLIKQIRDLKKTAP
Sbjct: 301 LIEFLSSFQKERTDDEQFADEKNYLIKQIRDLKKTAP 337


>gi|118766350 calcium binding protein 39-like [Homo sapiens]
          Length = 337

 Score =  660 bits (1704), Expect = 0.0
 Identities = 337/337 (100%), Positives = 337/337 (100%)

Query: 1   MKKMPLFSKSHKNPAEIVKILKDNLAILEKQDKKTDKASEEVSKSLQAMKEILCGTNEKE 60
           MKKMPLFSKSHKNPAEIVKILKDNLAILEKQDKKTDKASEEVSKSLQAMKEILCGTNEKE
Sbjct: 1   MKKMPLFSKSHKNPAEIVKILKDNLAILEKQDKKTDKASEEVSKSLQAMKEILCGTNEKE 60

Query: 61  PPTEAVAQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNILRRQIGTRSPTVEYIS 120
           PPTEAVAQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNILRRQIGTRSPTVEYIS
Sbjct: 61  PPTEAVAQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNILRRQIGTRSPTVEYIS 120

Query: 121 AHPHILFMLLKGYEAPQIALRCGIMLRECIRHEPLAKIILFSNQFRDFFKYVELSTFDIA 180
           AHPHILFMLLKGYEAPQIALRCGIMLRECIRHEPLAKIILFSNQFRDFFKYVELSTFDIA
Sbjct: 121 AHPHILFMLLKGYEAPQIALRCGIMLRECIRHEPLAKIILFSNQFRDFFKYVELSTFDIA 180

Query: 181 SDAFATFKDLLTRHKVLVADFLEQNYDTIFEDYEKLLQSENYVTKRQSLKLLGELILDRH 240
           SDAFATFKDLLTRHKVLVADFLEQNYDTIFEDYEKLLQSENYVTKRQSLKLLGELILDRH
Sbjct: 181 SDAFATFKDLLTRHKVLVADFLEQNYDTIFEDYEKLLQSENYVTKRQSLKLLGELILDRH 240

Query: 241 NFAIMTKYISKPENLKLMMNLLRDKSPNIQFEAFHVFKVFVASPHKTQPIVEILLKNQPK 300
           NFAIMTKYISKPENLKLMMNLLRDKSPNIQFEAFHVFKVFVASPHKTQPIVEILLKNQPK
Sbjct: 241 NFAIMTKYISKPENLKLMMNLLRDKSPNIQFEAFHVFKVFVASPHKTQPIVEILLKNQPK 300

Query: 301 LIEFLSSFQKERTDDEQFADEKNYLIKQIRDLKKTAP 337
           LIEFLSSFQKERTDDEQFADEKNYLIKQIRDLKKTAP
Sbjct: 301 LIEFLSSFQKERTDDEQFADEKNYLIKQIRDLKKTAP 337


>gi|195927022 calcium binding protein 39 [Homo sapiens]
          Length = 341

 Score =  535 bits (1377), Expect = e-152
 Identities = 271/333 (81%), Positives = 302/333 (90%), Gaps = 3/333 (0%)

Query: 7   FSKSHKNPAEIVKILKDNLAILEKQD---KKTDKASEEVSKSLQAMKEILCGTNEKEPPT 63
           F KSHK+PA+IVK LK+++A+LEKQD   KK +KA+EEVSK+L AMKEIL GTNEKEP T
Sbjct: 5   FGKSHKSPADIVKNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEKEPQT 64

Query: 64  EAVAQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNILRRQIGTRSPTVEYISAHP 123
           EAVAQLAQELY+SGLL TL+ADLQLIDFEGKKDV QIFNNILRRQIGTR+PTVEYI    
Sbjct: 65  EAVAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQ 124

Query: 124 HILFMLLKGYEAPQIALRCGIMLRECIRHEPLAKIILFSNQFRDFFKYVELSTFDIASDA 183
           +ILFMLLKGYE+P+IAL CGIMLRECIRHEPLAKIIL+S QF DFF+YVE+STFDIASDA
Sbjct: 125 NILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDIASDA 184

Query: 184 FATFKDLLTRHKVLVADFLEQNYDTIFEDYEKLLQSENYVTKRQSLKLLGELILDRHNFA 243
           FATFKDLLTRHK+L A+FLEQ+YD  F +YEKLL SENYVTKRQSLKLLGEL+LDRHNF 
Sbjct: 185 FATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDRHNFT 244

Query: 244 IMTKYISKPENLKLMMNLLRDKSPNIQFEAFHVFKVFVASPHKTQPIVEILLKNQPKLIE 303
           IMTKYISKPENLKLMMNLLRDKS NIQFEAFHVFKVFVA+P+KTQPI++ILLKNQ KLIE
Sbjct: 245 IMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQAKLIE 304

Query: 304 FLSSFQKERTDDEQFADEKNYLIKQIRDLKKTA 336
           FLS FQ +RT+DEQF DEK YL+KQIRDLK+ A
Sbjct: 305 FLSKFQNDRTEDEQFNDEKTYLVKQIRDLKRPA 337


>gi|195927020 calcium binding protein 39 [Homo sapiens]
          Length = 341

 Score =  535 bits (1377), Expect = e-152
 Identities = 271/333 (81%), Positives = 302/333 (90%), Gaps = 3/333 (0%)

Query: 7   FSKSHKNPAEIVKILKDNLAILEKQD---KKTDKASEEVSKSLQAMKEILCGTNEKEPPT 63
           F KSHK+PA+IVK LK+++A+LEKQD   KK +KA+EEVSK+L AMKEIL GTNEKEP T
Sbjct: 5   FGKSHKSPADIVKNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEKEPQT 64

Query: 64  EAVAQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNILRRQIGTRSPTVEYISAHP 123
           EAVAQLAQELY+SGLL TL+ADLQLIDFEGKKDV QIFNNILRRQIGTR+PTVEYI    
Sbjct: 65  EAVAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQ 124

Query: 124 HILFMLLKGYEAPQIALRCGIMLRECIRHEPLAKIILFSNQFRDFFKYVELSTFDIASDA 183
           +ILFMLLKGYE+P+IAL CGIMLRECIRHEPLAKIIL+S QF DFF+YVE+STFDIASDA
Sbjct: 125 NILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDIASDA 184

Query: 184 FATFKDLLTRHKVLVADFLEQNYDTIFEDYEKLLQSENYVTKRQSLKLLGELILDRHNFA 243
           FATFKDLLTRHK+L A+FLEQ+YD  F +YEKLL SENYVTKRQSLKLLGEL+LDRHNF 
Sbjct: 185 FATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDRHNFT 244

Query: 244 IMTKYISKPENLKLMMNLLRDKSPNIQFEAFHVFKVFVASPHKTQPIVEILLKNQPKLIE 303
           IMTKYISKPENLKLMMNLLRDKS NIQFEAFHVFKVFVA+P+KTQPI++ILLKNQ KLIE
Sbjct: 245 IMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQAKLIE 304

Query: 304 FLSSFQKERTDDEQFADEKNYLIKQIRDLKKTA 336
           FLS FQ +RT+DEQF DEK YL+KQIRDLK+ A
Sbjct: 305 FLSKFQNDRTEDEQFNDEKTYLVKQIRDLKRPA 337


>gi|7706481 calcium binding protein 39 [Homo sapiens]
          Length = 341

 Score =  535 bits (1377), Expect = e-152
 Identities = 271/333 (81%), Positives = 302/333 (90%), Gaps = 3/333 (0%)

Query: 7   FSKSHKNPAEIVKILKDNLAILEKQD---KKTDKASEEVSKSLQAMKEILCGTNEKEPPT 63
           F KSHK+PA+IVK LK+++A+LEKQD   KK +KA+EEVSK+L AMKEIL GTNEKEP T
Sbjct: 5   FGKSHKSPADIVKNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEKEPQT 64

Query: 64  EAVAQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNILRRQIGTRSPTVEYISAHP 123
           EAVAQLAQELY+SGLL TL+ADLQLIDFEGKKDV QIFNNILRRQIGTR+PTVEYI    
Sbjct: 65  EAVAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQ 124

Query: 124 HILFMLLKGYEAPQIALRCGIMLRECIRHEPLAKIILFSNQFRDFFKYVELSTFDIASDA 183
           +ILFMLLKGYE+P+IAL CGIMLRECIRHEPLAKIIL+S QF DFF+YVE+STFDIASDA
Sbjct: 125 NILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDIASDA 184

Query: 184 FATFKDLLTRHKVLVADFLEQNYDTIFEDYEKLLQSENYVTKRQSLKLLGELILDRHNFA 243
           FATFKDLLTRHK+L A+FLEQ+YD  F +YEKLL SENYVTKRQSLKLLGEL+LDRHNF 
Sbjct: 185 FATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDRHNFT 244

Query: 244 IMTKYISKPENLKLMMNLLRDKSPNIQFEAFHVFKVFVASPHKTQPIVEILLKNQPKLIE 303
           IMTKYISKPENLKLMMNLLRDKS NIQFEAFHVFKVFVA+P+KTQPI++ILLKNQ KLIE
Sbjct: 245 IMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQAKLIE 304

Query: 304 FLSSFQKERTDDEQFADEKNYLIKQIRDLKKTA 336
           FLS FQ +RT+DEQF DEK YL+KQIRDLK+ A
Sbjct: 305 FLSKFQNDRTEDEQFNDEKTYLVKQIRDLKRPA 337


>gi|116256481 TNFAIP3 interacting protein 1 [Homo sapiens]
          Length = 636

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 2/40 (5%)

Query: 294 LLKNQPKLIEFLSSFQKERTDDEQFADEKNYLIKQIRDLK 333
           LLK Q K+ E    FQ+ER+D E+  +EK  L KQ+  L+
Sbjct: 461 LLKQQVKIFE--EDFQRERSDRERMNEEKEELKKQVEKLQ 498


>gi|154354962 inner membrane protein, mitochondrial isoform 2 [Homo
           sapiens]
          Length = 757

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 12/127 (9%)

Query: 5   PLFSKSHKNPAEIVKILKDNL-----AILEKQDKKTDKASEEVSKSLQAMKEILCGTNEK 59
           P  + +    A+I+    D L     A+  ++  KTD       K   A+ E    +  +
Sbjct: 136 PASATAPTEAAQIISAAGDTLSVPAPAVQPEESLKTDHPEIGEGKPTPALSEASSSSIRE 195

Query: 60  EPPTEAVAQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNILRRQIGTRSPTVEYI 119
            PP E  A+LAQ+     + +  +A       +  +D  +   ++  + I  ++  V+ +
Sbjct: 196 RPPEEVAARLAQQEKQEQVKIESLA-------KSLEDALRQTASVTLQAIAAQNAAVQAV 248

Query: 120 SAHPHIL 126
           +AH +IL
Sbjct: 249 NAHSNIL 255


>gi|169207319 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 828

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 14/134 (10%)

Query: 203 EQNYDTIFEDYEKLLQSENYVTKRQSLKLLGELILDRHNFAI---MTKYISKPENLKLMM 259
           EQ Y    E   KL +  N +T ++      E +L+ H F      ++YIS  E++K  +
Sbjct: 569 EQEYK---EKRRKLEELSNIITAQRQ----EEDLLNNHIFLFTRDFSRYISNMEDVKQEL 621

Query: 260 NLLRDKSPNIQFEAFHVFKVFVASPHKTQPIVEILLKNQPKLIEFL----SSFQKERTDD 315
             LRD+      + F   K      +      ++LL    KL E++    ++ +K R   
Sbjct: 622 QQLRDQESKKNKDHFETLKNLENGFYINDQKADLLLLENKKLKEYILYLKNNIEKYREGQ 681

Query: 316 EQFADEKNYLIKQI 329
           E      N L +Q+
Sbjct: 682 EALMHTSNDLSRQL 695


>gi|4758650 kinesin family member 5C [Homo sapiens]
          Length = 957

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 8/81 (9%)

Query: 34  KTDKASEEVSKSLQAMKEILCGTNEK----EPPTEAVAQLAQELYSSGLLVTL----IAD 85
           + + A +EV + LQA++E+    ++K    E  T A  QL  EL      +T     ++ 
Sbjct: 476 ENEAAKDEVKEVLQALEELAVNYDQKSQEVEDKTRANEQLTDELAQKTTTLTTTQRELSQ 535

Query: 86  LQLIDFEGKKDVTQIFNNILR 106
           LQ +    KK  T+I N +L+
Sbjct: 536 LQELSNHQKKRATEILNLLLK 556


>gi|27262628 nuclear autoantigenic sperm protein isoform 2 [Homo
           sapiens]
          Length = 788

 Score = 32.3 bits (72), Expect = 0.62
 Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 7/53 (13%)

Query: 7   FSKSHKNPAEIVKILKDNLAILEKQDKKTDKASEEVSKSLQAMKEILCGTNEK 59
           FSKS       ++++++ +A+L +Q K+ + +S E  K ++ +KE+L    EK
Sbjct: 607 FSKS-------IEVIENRMAVLNEQVKEAEGSSAEYKKEIEELKELLPEIREK 652


>gi|27262634 nuclear autoantigenic sperm protein isoform 1 [Homo
           sapiens]
          Length = 790

 Score = 32.3 bits (72), Expect = 0.62
 Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 7/53 (13%)

Query: 7   FSKSHKNPAEIVKILKDNLAILEKQDKKTDKASEEVSKSLQAMKEILCGTNEK 59
           FSKS       ++++++ +A+L +Q K+ + +S E  K ++ +KE+L    EK
Sbjct: 609 FSKS-------IEVIENRMAVLNEQVKEAEGSSAEYKKEIEELKELLPEIREK 654


>gi|27262630 nuclear autoantigenic sperm protein isoform 3 [Homo
           sapiens]
          Length = 449

 Score = 32.3 bits (72), Expect = 0.62
 Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 7/53 (13%)

Query: 7   FSKSHKNPAEIVKILKDNLAILEKQDKKTDKASEEVSKSLQAMKEILCGTNEK 59
           FSKS       ++++++ +A+L +Q K+ + +S E  K ++ +KE+L    EK
Sbjct: 268 FSKS-------IEVIENRMAVLNEQVKEAEGSSAEYKKEIEELKELLPEIREK 313


>gi|21361440 RAB3A interacting protein (rabin3)-like 1 [Homo
           sapiens]
          Length = 382

 Score = 32.3 bits (72), Expect = 0.62
 Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 6/108 (5%)

Query: 19  KILKDNLAILEKQDKKTDKASEEVSKSLQAMKEILCGTNEKEPPTEAVAQLAQELYSSGL 78
           + LK+ L   +K+ K  D+  E +SK  + +++      E E  T ++ + A ++     
Sbjct: 77  EFLKEELHRAQKELKLKDEECERLSKVREQLEQ------ELEELTASLFEEAHKMVREAN 130

Query: 79  LVTLIADLQLIDFEGKKDVTQIFNNILRRQIGTRSPTVEYISAHPHIL 126
           +    ++ QL +  GK D+ Q     L+  + T +P       HP +L
Sbjct: 131 MKQAASEKQLKEARGKIDMLQAEVTALKTLVITSTPASPNRELHPQLL 178


>gi|169207756 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 828

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 14/134 (10%)

Query: 203 EQNYDTIFEDYEKLLQSENYVTKRQSLKLLGELILDRHNFAI---MTKYISKPENLKLMM 259
           EQ Y    E   KL +  N +T ++      E +L+ H F      ++YIS  E++K  +
Sbjct: 569 EQEYK---EKRRKLEELSNIITAQRQ----EEDLLNNHIFLFTRDFSRYISNMEDVKQEL 621

Query: 260 NLLRDKSPNIQFEAFHVFKVFVASPHKTQPIVEILLKNQPKLIEFL----SSFQKERTDD 315
             LRD+      + F   K      +      ++LL    KL E++    ++ +K R   
Sbjct: 622 QQLRDQESKKNKDHFETLKNLENGFYINDQKADLLLLENKKLKEYILYLKNNIEKYREGQ 681

Query: 316 EQFADEKNYLIKQI 329
           E      + L +Q+
Sbjct: 682 EALMHTSSDLSRQL 695


>gi|169207046 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 828

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 14/134 (10%)

Query: 203 EQNYDTIFEDYEKLLQSENYVTKRQSLKLLGELILDRHNFAI---MTKYISKPENLKLMM 259
           EQ Y    E   KL +  N +T ++      E +L+ H F      ++YIS  E++K  +
Sbjct: 569 EQEYK---EKRRKLEELSNIITAQRQ----EEDLLNNHIFLFTRDFSRYISNMEDVKQEL 621

Query: 260 NLLRDKSPNIQFEAFHVFKVFVASPHKTQPIVEILLKNQPKLIEFL----SSFQKERTDD 315
             LRD+      + F   K      +      ++LL    KL E++    ++ +K R   
Sbjct: 622 QQLRDQESKKNKDHFETLKNLENGFYINDQKADLLLLENKKLKEYILYLKNNIEKYREGQ 681

Query: 316 EQFADEKNYLIKQI 329
           E      + L +Q+
Sbjct: 682 EALMHTSSDLSRQL 695


>gi|4502443 dystonin isoform 1e precursor [Homo sapiens]
          Length = 2649

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 21/105 (20%), Positives = 48/105 (45%)

Query: 7    FSKSHKNPAEIVKILKDNLAILEKQDKKTDKASEEVSKSLQAMKEILCGTNEKEPPTEAV 66
            F KSH+   + +K  K+N   +++ +++ +K++E      Q ++E+    NE +   + +
Sbjct: 1534 FEKSHEQLLQNIKAEKENNDKIQRLNEELEKSNECAEMLKQKVEELTRQNNETKLMMQRI 1593

Query: 67   AQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNILRRQIGT 111
               ++ +      +    +   I  +G KD  +  N  L +Q  T
Sbjct: 1594 QAESENIVLEKQTIQQRCEALKIQADGFKDQLRSTNEHLHKQTKT 1638


>gi|4504063 golgin 97 [Homo sapiens]
          Length = 767

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 43/149 (28%), Positives = 66/149 (44%), Gaps = 15/149 (10%)

Query: 198 VADFLEQNYDTIFEDYEKLLQSENYVTKRQ---SLKLLGELILDRHNFAIMTKYISKPEN 254
           + D  EQN   + E  E LLQ E  + + +   +  LL    L     A+ T    +   
Sbjct: 506 IIDEKEQN---LREKTEVLLQKEQEILQLERGHNSALLQIHQLQAELEALRTLKAEEAAV 562

Query: 255 LKLMMNLLRDKSPNIQFEAFHVFKVFVASPHKTQPIVEILLKNQPKLIEF----LSSFQK 310
           +    +LLR + P +Q EA  V +  V S     P+ ++    +    E     L+  QK
Sbjct: 563 VAEQEDLLRLRGP-LQAEALSVNESHVTSRAMQDPVFQLPTAGRTPNGEVGAMDLTQLQK 621

Query: 311 ERTDDEQFADEKNYLIKQIR----DLKKT 335
           E+ D EQ   EKN  IKQ++    +L+KT
Sbjct: 622 EKQDLEQQLLEKNKTIKQMQQRMLELRKT 650


>gi|154354964 inner membrane protein, mitochondrial isoform 1 [Homo
           sapiens]
          Length = 758

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 28/128 (21%), Positives = 56/128 (43%), Gaps = 13/128 (10%)

Query: 5   PLFSKSHKNPAEIVKILKDNL-----AILEKQDKKTDKASEEVSKSLQAMKEILCGTNEK 59
           P  + +    A+I+    D L     A+  ++  KTD       K   A+ E    ++ +
Sbjct: 136 PASATAPTEAAQIISAAGDTLSVPAPAVQPEESLKTDHPEIGEGKPTPALSEEASSSSIR 195

Query: 60  E-PPTEAVAQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNILRRQIGTRSPTVEY 118
           E PP E  A+LAQ+     + +  +A       +  +D  +   ++  + I  ++  V+ 
Sbjct: 196 ERPPEEVAARLAQQEKQEQVKIESLA-------KSLEDALRQTASVTLQAIAAQNAAVQA 248

Query: 119 ISAHPHIL 126
           ++AH +IL
Sbjct: 249 VNAHSNIL 256


>gi|45446749 kinesin family member 5A [Homo sapiens]
          Length = 1032

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 19/87 (21%), Positives = 42/87 (48%), Gaps = 8/87 (9%)

Query: 28  LEKQDKKTDKASEEVSKSLQAMKEILCGTNEKEPPTE--------AVAQLAQELYSSGLL 79
           L     + D A +EV + LQA++E+    ++K    E         V +L+Q++ +   L
Sbjct: 470 LSHLQSENDAAKDEVKEVLQALEELAVNYDQKSQEVEEKSQQNQLLVDELSQKVATMLSL 529

Query: 80  VTLIADLQLIDFEGKKDVTQIFNNILR 106
            + +  LQ +    +K + ++ N +++
Sbjct: 530 ESELQRLQEVSGHQRKRIAEVLNGLMK 556


>gi|41281862 RAB3A interacting protein isoform beta 2 [Homo sapiens]
          Length = 411

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 6/95 (6%)

Query: 21  LKDNLAILEKQDKKTDKASEEVSKSLQAMKEILCGTNEKEPPTEAVAQLAQELYSSGLLV 80
           LK+ LA  +++ K  D+  E +SK    + +      E E  T ++ + A ++     + 
Sbjct: 177 LKEELAKAQRELKLKDEECERLSKVRDQLGQ------ELEELTASLFEEAHKMVREANIK 230

Query: 81  TLIADLQLIDFEGKKDVTQIFNNILRRQIGTRSPT 115
              A+ QL + +GK DV Q     L+  + + SPT
Sbjct: 231 QATAEKQLKEAQGKIDVLQAEVAALKTLVLSSSPT 265


>gi|41281871 RAB3A interacting protein isoform beta 1 [Homo sapiens]
          Length = 395

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 6/95 (6%)

Query: 21  LKDNLAILEKQDKKTDKASEEVSKSLQAMKEILCGTNEKEPPTEAVAQLAQELYSSGLLV 80
           LK+ LA  +++ K  D+  E +SK    + +      E E  T ++ + A ++     + 
Sbjct: 161 LKEELAKAQRELKLKDEECERLSKVRDQLGQ------ELEELTASLFEEAHKMVREANIK 214

Query: 81  TLIADLQLIDFEGKKDVTQIFNNILRRQIGTRSPT 115
              A+ QL + +GK DV Q     L+  + + SPT
Sbjct: 215 QATAEKQLKEAQGKIDVLQAEVAALKTLVLSSSPT 249


>gi|41281856 RAB3A interacting protein isoform alpha 2 [Homo
           sapiens]
          Length = 476

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 6/95 (6%)

Query: 21  LKDNLAILEKQDKKTDKASEEVSKSLQAMKEILCGTNEKEPPTEAVAQLAQELYSSGLLV 80
           LK+ LA  +++ K  D+  E +SK    + +      E E  T ++ + A ++     + 
Sbjct: 177 LKEELAKAQRELKLKDEECERLSKVRDQLGQ------ELEELTASLFEEAHKMVREANIK 230

Query: 81  TLIADLQLIDFEGKKDVTQIFNNILRRQIGTRSPT 115
              A+ QL + +GK DV Q     L+  + + SPT
Sbjct: 231 QATAEKQLKEAQGKIDVLQAEVAALKTLVLSSSPT 265


>gi|28274699 RAB3A interacting protein isoform alpha 1 [Homo
           sapiens]
          Length = 460

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 6/95 (6%)

Query: 21  LKDNLAILEKQDKKTDKASEEVSKSLQAMKEILCGTNEKEPPTEAVAQLAQELYSSGLLV 80
           LK+ LA  +++ K  D+  E +SK    + +      E E  T ++ + A ++     + 
Sbjct: 161 LKEELAKAQRELKLKDEECERLSKVRDQLGQ------ELEELTASLFEEAHKMVREANIK 214

Query: 81  TLIADLQLIDFEGKKDVTQIFNNILRRQIGTRSPT 115
              A+ QL + +GK DV Q     L+  + + SPT
Sbjct: 215 QATAEKQLKEAQGKIDVLQAEVAALKTLVLSSSPT 249


>gi|4504603 interferon, beta 1, fibroblast [Homo sapiens]
          Length = 187

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 14/114 (12%)

Query: 216 LLQSENYVTKRQSLKLLGEL---ILDRHNFAIMTKYISKPENLKLMMNLLRDKSPNIQFE 272
           L +S N+  ++   +L G L   + DR NF I       PE +K +    ++ +    +E
Sbjct: 30  LQRSSNFQCQKLLWQLNGRLEYCLKDRMNFDI-------PEEIKQLQQFQKEDAALTIYE 82

Query: 273 A----FHVFKVFVASPHKTQPIVEILLKNQPKLIEFLSSFQKERTDDEQFADEK 322
                F +F+   +S    + IVE LL N    I  L +  +E+ + E F   K
Sbjct: 83  MLQNIFAIFRQDSSSTGWNETIVENLLANVYHQINHLKTVLEEKLEKEDFTRGK 136


>gi|4758648 kinesin family member 5B [Homo sapiens]
          Length = 963

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 6/72 (8%)

Query: 22  KDNL-AILEKQDKKTDKASEEVSKSLQAMKEILCGTNEK----EPPTEAVAQLAQEL-YS 75
           +DN+ A L +   + D + EEV + LQA++E+    ++K    E  T+    L+ EL   
Sbjct: 467 QDNMQAELNRLQAENDASKEEVKEVLQALEELAVNYDQKSQEVEDKTKEYELLSDELNQK 526

Query: 76  SGLLVTLIADLQ 87
           S  L ++ A+LQ
Sbjct: 527 SATLASIDAELQ 538


>gi|4503195 cytochrome P450, family 17 [Homo sapiens]
          Length = 508

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 122 HPHILFMLLKGYEAPQIALRCGIMLRECIRHEPLAKIILFSNQFRDFFKYVELSTFDIAS 181
           H H  F  L+    P  ++R G      + H  LAK +L   + +DF    +++T DIAS
Sbjct: 48  HMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLI-KKGKDFSGRPQMATLDIAS 106

Query: 182 D 182
           +
Sbjct: 107 N 107


>gi|215982794 myosin VA isoform 2 [Homo sapiens]
          Length = 1828

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 7/38 (18%)

Query: 201 FLEQNYDTIFEDYEKLLQSENYVTKRQSLKLLGELILD 238
           FLE+N DT+FE+  K+L+S  +       K+L EL  D
Sbjct: 564 FLEKNKDTVFEEQIKVLKSSKF-------KMLPELFQD 594


>gi|215982791 myosin VA isoform 1 [Homo sapiens]
          Length = 1855

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 7/38 (18%)

Query: 201 FLEQNYDTIFEDYEKLLQSENYVTKRQSLKLLGELILD 238
           FLE+N DT+FE+  K+L+S  +       K+L EL  D
Sbjct: 564 FLEKNKDTVFEEQIKVLKSSKF-------KMLPELFQD 594


>gi|197209974 coiled-coil and C2 domain containing 2A isoform a [Homo
            sapiens]
          Length = 1620

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 14/76 (18%), Positives = 38/76 (50%), Gaps = 3/76 (3%)

Query: 207  DTIFEDYEKLLQSENYVTKRQSLKLLGELI---LDRHNFAIMTKYISKPENLKLMMNLLR 263
            + +F+DYEK L+  N +  ++ +     ++   L +   +++ +++   +   L   ++ 
Sbjct: 939  EKVFQDYEKRLRDRNVIETKEHIDTHRAIVAKYLQQVRESVINRFLIAKQYFLLADMIVE 998

Query: 264  DKSPNIQFEAFHVFKV 279
            ++ PNI      +FK+
Sbjct: 999  EEVPNISILGLSLFKL 1014


>gi|197209817 coiled-coil and C2 domain containing 2A isoform b
           [Homo sapiens]
          Length = 1512

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 14/76 (18%), Positives = 38/76 (50%), Gaps = 3/76 (3%)

Query: 207 DTIFEDYEKLLQSENYVTKRQSLKLLGELI---LDRHNFAIMTKYISKPENLKLMMNLLR 263
           + +F+DYEK L+  N +  ++ +     ++   L +   +++ +++   +   L   ++ 
Sbjct: 890 EKVFQDYEKRLRDRNVIETKEHIDTHRAIVAKYLQQVRESVINRFLIAKQYFLLADMIVE 949

Query: 264 DKSPNIQFEAFHVFKV 279
           ++ PNI      +FK+
Sbjct: 950 EEVPNISILGLSLFKL 965


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.136    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,241,764
Number of Sequences: 37866
Number of extensions: 458885
Number of successful extensions: 1847
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 1814
Number of HSP's gapped (non-prelim): 55
length of query: 337
length of database: 18,247,518
effective HSP length: 103
effective length of query: 234
effective length of database: 14,347,320
effective search space: 3357272880
effective search space used: 3357272880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.