Search of human proteins with 239753717

Search of human proteins with 239753717

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239753717 PREDICTED: similar to hCG1794790 [Homo sapiens]
         (172 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239753717 PREDICTED: similar to hCG1794790 [Homo sapiens]          353   3e-98
gi|239748259 PREDICTED: similar to hCG1794790 [Homo sapiens]          353   3e-98
gi|239742160 PREDICTED: similar to hCG1794790 [Homo sapiens]          351   2e-97
gi|10863877 phospholipid scramblase 1 [Homo sapiens]                  101   3e-22
gi|146229354 phospholipid scramblase family, member 5 [Homo sapi...    94   4e-20
gi|9966795 phospholipid scramblase 2 [Homo sapiens]                    92   2e-19
gi|190341019 phospholipid scramblase 4 isoform a [Homo sapiens]        87   7e-18
gi|190194379 phospholipid scramblase 4 isoform a [Homo sapiens]        87   7e-18
gi|190194377 phospholipid scramblase 4 isoform a [Homo sapiens]        87   7e-18
gi|31543417 phospholipid scramblase 3 [Homo sapiens]                   78   4e-15
gi|190194381 phospholipid scramblase 4 isoform b [Homo sapiens]        61   5e-10
gi|119120894 Dmx-like 2 [Homo sapiens]                                 31   0.46 
gi|8923271 coiled-coil domain containing 49 [Homo sapiens]             28   5.1  

>gi|239753717 PREDICTED: similar to hCG1794790 [Homo sapiens]
          Length = 172

 Score =  353 bits (907), Expect = 3e-98
 Identities = 172/172 (100%), Positives = 172/172 (100%)

Query: 1   MAIYDLRPWLSTPETITSCPLGLEYLHQINQLTVCQHFDPLGVLRKFETSKTYEILNNQV 60
           MAIYDLRPWLSTPETITSCPLGLEYLHQINQLTVCQHFDPLGVLRKFETSKTYEILNNQV
Sbjct: 1   MAIYDLRPWLSTPETITSCPLGLEYLHQINQLTVCQHFDPLGVLRKFETSKTYEILNNQV 60

Query: 61  QRIYFAEERNNCFLRHLCGFSSPFTMTIYDNVGRDVLALHKALKCSLQKLLTLDEEMVIG 120
           QRIYFAEERNNCFLRHLCGFSSPFTMTIYDNVGRDVLALHKALKCSLQKLLTLDEEMVIG
Sbjct: 61  QRIYFAEERNNCFLRHLCGFSSPFTMTIYDNVGRDVLALHKALKCSLQKLLTLDEEMVIG 120

Query: 121 KISKQYSGFVRGILTNGEKFGIQFPFDLDVKIKXLMLGATFLIEYMYFELWP 172
           KISKQYSGFVRGILTNGEKFGIQFPFDLDVKIK LMLGATFLIEYMYFELWP
Sbjct: 121 KISKQYSGFVRGILTNGEKFGIQFPFDLDVKIKXLMLGATFLIEYMYFELWP 172


>gi|239748259 PREDICTED: similar to hCG1794790 [Homo sapiens]
          Length = 172

 Score =  353 bits (907), Expect = 3e-98
 Identities = 171/172 (99%), Positives = 171/172 (99%)

Query: 1   MAIYDLRPWLSTPETITSCPLGLEYLHQINQLTVCQHFDPLGVLRKFETSKTYEILNNQV 60
           MAIYDLRPWLSTPETITSCPLGLEYLHQINQLTVCQHFDPLGVLRKFETSKTYEILNNQV
Sbjct: 1   MAIYDLRPWLSTPETITSCPLGLEYLHQINQLTVCQHFDPLGVLRKFETSKTYEILNNQV 60

Query: 61  QRIYFAEERNNCFLRHLCGFSSPFTMTIYDNVGRDVLALHKALKCSLQKLLTLDEEMVIG 120
           QRIYFAEERNNCFLRHLCGFSSPFTMTIYDNVGRDVLALHKALKCSLQKLLTLDEEMVIG
Sbjct: 61  QRIYFAEERNNCFLRHLCGFSSPFTMTIYDNVGRDVLALHKALKCSLQKLLTLDEEMVIG 120

Query: 121 KISKQYSGFVRGILTNGEKFGIQFPFDLDVKIKXLMLGATFLIEYMYFELWP 172
           KISKQYSGFVRGILTNGEKFGIQFPFDLDVKIK LMLGATFLIEYMYFELWP
Sbjct: 121 KISKQYSGFVRGILTNGEKFGIQFPFDLDVKIKALMLGATFLIEYMYFELWP 172


>gi|239742160 PREDICTED: similar to hCG1794790 [Homo sapiens]
          Length = 172

 Score =  351 bits (900), Expect = 2e-97
 Identities = 170/172 (98%), Positives = 170/172 (98%)

Query: 1   MAIYDLRPWLSTPETITSCPLGLEYLHQINQLTVCQHFDPLGVLRKFETSKTYEILNNQV 60
           MAIYDLRPWLSTPETITSCPLGLEYLHQINQLTVCQHFDPLGVLRKFETSKTYEILNNQ 
Sbjct: 1   MAIYDLRPWLSTPETITSCPLGLEYLHQINQLTVCQHFDPLGVLRKFETSKTYEILNNQG 60

Query: 61  QRIYFAEERNNCFLRHLCGFSSPFTMTIYDNVGRDVLALHKALKCSLQKLLTLDEEMVIG 120
           QRIYFAEERNNCFLRHLCGFSSPFTMTIYDNVGRDVLALHKALKCSLQKLLTLDEEMVIG
Sbjct: 61  QRIYFAEERNNCFLRHLCGFSSPFTMTIYDNVGRDVLALHKALKCSLQKLLTLDEEMVIG 120

Query: 121 KISKQYSGFVRGILTNGEKFGIQFPFDLDVKIKXLMLGATFLIEYMYFELWP 172
           KISKQYSGFVRGILTNGEKFGIQFPFDLDVKIK LMLGATFLIEYMYFELWP
Sbjct: 121 KISKQYSGFVRGILTNGEKFGIQFPFDLDVKIKALMLGATFLIEYMYFELWP 172


>gi|10863877 phospholipid scramblase 1 [Homo sapiens]
          Length = 318

 Score =  101 bits (252), Expect = 3e-22
 Identities = 47/99 (47%), Positives = 66/99 (66%)

Query: 8   PWLSTPETITSCPLGLEYLHQINQLTVCQHFDPLGVLRKFETSKTYEILNNQVQRIYFAE 67
           PW+  P+   +CP GLEYL QI+Q+ + Q  + L VL  FET+  YEI N+  QR+YFA 
Sbjct: 84  PWMPAPQPPLNCPPGLEYLSQIDQILIHQQIELLEVLTGFETNNKYEIKNSFGQRVYFAA 143

Query: 68  ERNNCFLRHLCGFSSPFTMTIYDNVGRDVLALHKALKCS 106
           E  +C  R+ CG S PFT+ I DN+G++V+ L + L+CS
Sbjct: 144 EDTDCCTRNCCGPSRPFTLRIIDNMGQEVITLERPLRCS 182


>gi|146229354 phospholipid scramblase family, member 5 [Homo
           sapiens]
          Length = 271

 Score = 94.4 bits (233), Expect = 4e-20
 Identities = 63/213 (29%), Positives = 96/213 (45%), Gaps = 61/213 (28%)

Query: 18  SCPLGLEYLHQINQLTVCQHFDPLGVLRKFETSKTYEILNNQVQRIYFAEERNNCFLRHL 77
           S P GLEYL Q++ + + Q  + LG++   ETS  YEI N+  QRIYFA E + CF R  
Sbjct: 53  SLPPGLEYLSQLDLIIIHQQVELLGMILGTETSNKYEIKNSLGQRIYFAVEESICFNRTF 112

Query: 78  CGFSSPFTMTIYDNVGRDVLALHKALKCS-------LQKL-LTLDEEMVIGKISKQYSGF 129
           C      T+ I DN GR+V+ +++ L+C+       LQ+L +      ++G +++++  F
Sbjct: 113 CSTLRSCTLRITDNSGREVITVNRPLRCNSCWCPCYLQELEIQAPPGTIVGYVTQKWDPF 172

Query: 130 -----------------------------------------------------VRGILTN 136
                                                                V  + TN
Sbjct: 173 LPKFTIQNANKEDILKIVGPCVTCGCFGDVDFEVKTINEKLTIGKISKYWSGFVNDVFTN 232

Query: 137 GEKFGIQFPFDLDVKIKXLMLGATFLIEYMYFE 169
            + FGI  P DLDV +K  M+GA FL ++M+FE
Sbjct: 233 ADNFGIHVPADLDVTVKAAMIGACFLFDFMFFE 265


>gi|9966795 phospholipid scramblase 2 [Homo sapiens]
          Length = 224

 Score = 92.0 bits (227), Expect = 2e-19
 Identities = 46/97 (47%), Positives = 62/97 (63%)

Query: 10  LSTPETITSCPLGLEYLHQINQLTVCQHFDPLGVLRKFETSKTYEILNNQVQRIYFAEER 69
           +  P    +CP GLEYL QI+ + + Q  + L VL  FE+S  YEI N+  QRIYFA E 
Sbjct: 1   MPAPPPPLNCPPGLEYLSQIDMILIHQQIELLEVLFSFESSNMYEIKNSFGQRIYFAAED 60

Query: 70  NNCFLRHLCGFSSPFTMTIYDNVGRDVLALHKALKCS 106
            N  +R+ CG S PFT+ I DNVGR+V+ L + L+C+
Sbjct: 61  TNFCIRNCCGRSRPFTLRITDNVGREVITLERPLRCN 97



 Score = 80.9 bits (198), Expect = 5e-16
 Identities = 35/61 (57%), Positives = 51/61 (83%)

Query: 109 KLLTLDEEMVIGKISKQYSGFVRGILTNGEKFGIQFPFDLDVKIKXLMLGATFLIEYMYF 168
           ++ +LDE++V+G+ISK +SGF+R   T+ + FGIQFP DLDVK+K +M+GA FLI+YM+F
Sbjct: 161 EITSLDEQIVVGRISKHWSGFLREAFTDADNFGIQFPRDLDVKMKAVMIGACFLIDYMFF 220

Query: 169 E 169
           E
Sbjct: 221 E 221


>gi|190341019 phospholipid scramblase 4 isoform a [Homo sapiens]
          Length = 329

 Score = 87.0 bits (214), Expect = 7e-18
 Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 64/227 (28%)

Query: 9   WLSTPETITSCPLGLEYLHQINQLTVCQHFDPLGVLRKFETSKTYEILNNQVQRIYFAEE 68
           W+  P  + +CP GLEYL Q++ + V QHF+PL ++  FET+  Y+I NN  Q +Y   E
Sbjct: 99  WMPGPTPMANCPPGLEYLVQLDNIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYIVTE 158

Query: 69  ------RN-------------NCFLRHLCGFSSPFTMTI--------------------- 88
                 RN             +C  R +     PF  T                      
Sbjct: 159 DTDDFTRNAYRTLRPFVLRVTDCMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVT 218

Query: 89  ------YDNVGRDVLALHKALK--------------C---SLQKLLTLDEEMVIGKISKQ 125
                 + N+ R V ++    K              C   S+ ++ +LD    IG I ++
Sbjct: 219 IGFVAEHWNLCRAVYSIQNEKKENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRK 278

Query: 126 YSGFVRGILTNGEKFGIQFPFDLDVKIKXLMLGATFLIEYMYFELWP 172
           ++G +   + + + F I FP DLDVK+K ++ GA FLI++MYFE  P
Sbjct: 279 WNGLLSA-MADADHFDIHFPLDLDVKMKAMIFGACFLIDFMYFERSP 324


>gi|190194379 phospholipid scramblase 4 isoform a [Homo sapiens]
          Length = 329

 Score = 87.0 bits (214), Expect = 7e-18
 Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 64/227 (28%)

Query: 9   WLSTPETITSCPLGLEYLHQINQLTVCQHFDPLGVLRKFETSKTYEILNNQVQRIYFAEE 68
           W+  P  + +CP GLEYL Q++ + V QHF+PL ++  FET+  Y+I NN  Q +Y   E
Sbjct: 99  WMPGPTPMANCPPGLEYLVQLDNIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYIVTE 158

Query: 69  ------RN-------------NCFLRHLCGFSSPFTMTI--------------------- 88
                 RN             +C  R +     PF  T                      
Sbjct: 159 DTDDFTRNAYRTLRPFVLRVTDCMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVT 218

Query: 89  ------YDNVGRDVLALHKALK--------------C---SLQKLLTLDEEMVIGKISKQ 125
                 + N+ R V ++    K              C   S+ ++ +LD    IG I ++
Sbjct: 219 IGFVAEHWNLCRAVYSIQNEKKENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRK 278

Query: 126 YSGFVRGILTNGEKFGIQFPFDLDVKIKXLMLGATFLIEYMYFELWP 172
           ++G +   + + + F I FP DLDVK+K ++ GA FLI++MYFE  P
Sbjct: 279 WNGLLSA-MADADHFDIHFPLDLDVKMKAMIFGACFLIDFMYFERSP 324


>gi|190194377 phospholipid scramblase 4 isoform a [Homo sapiens]
          Length = 329

 Score = 87.0 bits (214), Expect = 7e-18
 Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 64/227 (28%)

Query: 9   WLSTPETITSCPLGLEYLHQINQLTVCQHFDPLGVLRKFETSKTYEILNNQVQRIYFAEE 68
           W+  P  + +CP GLEYL Q++ + V QHF+PL ++  FET+  Y+I NN  Q +Y   E
Sbjct: 99  WMPGPTPMANCPPGLEYLVQLDNIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYIVTE 158

Query: 69  ------RN-------------NCFLRHLCGFSSPFTMTI--------------------- 88
                 RN             +C  R +     PF  T                      
Sbjct: 159 DTDDFTRNAYRTLRPFVLRVTDCMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVT 218

Query: 89  ------YDNVGRDVLALHKALK--------------C---SLQKLLTLDEEMVIGKISKQ 125
                 + N+ R V ++    K              C   S+ ++ +LD    IG I ++
Sbjct: 219 IGFVAEHWNLCRAVYSIQNEKKENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRK 278

Query: 126 YSGFVRGILTNGEKFGIQFPFDLDVKIKXLMLGATFLIEYMYFELWP 172
           ++G +   + + + F I FP DLDVK+K ++ GA FLI++MYFE  P
Sbjct: 279 WNGLLSA-MADADHFDIHFPLDLDVKMKAMIFGACFLIDFMYFERSP 324


>gi|31543417 phospholipid scramblase 3 [Homo sapiens]
          Length = 295

 Score = 77.8 bits (190), Expect = 4e-15
 Identities = 34/58 (58%), Positives = 46/58 (79%)

Query: 112 TLDEEMVIGKISKQYSGFVRGILTNGEKFGIQFPFDLDVKIKXLMLGATFLIEYMYFE 169
           T DE   +G+ISKQ+ G VR  LT+ + FG+QFP DLDV++K ++LGATFLI+YM+FE
Sbjct: 226 TRDESRSVGRISKQWGGLVREALTDADDFGLQFPLDLDVRVKAVLLGATFLIDYMFFE 283



 Score = 52.4 bits (124), Expect = 2e-07
 Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 4/105 (3%)

Query: 1   MAIYDLRPWLSTPETITSCPLGLEYLHQINQLTVCQHFDPLGVLRKFETSKTYEILNNQV 60
           +A+    P+L  P      P GLE+L QI+Q+ + Q  + +     +ET   YE+ +   
Sbjct: 58  VALGSAAPFLPLP----GVPSGLEFLVQIDQILIHQKAERVETFLGWETCNRYELRSGAG 113

Query: 61  QRIYFAEERNNCFLRHLCGFSSPFTMTIYDNVGRDVLALHKALKC 105
           Q +  A E +NC  R  CG   P  + + D   R+VL L + L C
Sbjct: 114 QPLGQAAEESNCCARLCCGARRPLRVRLADPGDREVLRLLRPLHC 158


>gi|190194381 phospholipid scramblase 4 isoform b [Homo sapiens]
          Length = 239

 Score = 60.8 bits (146), Expect = 5e-10
 Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 32/166 (19%)

Query: 9   WLSTPETITSCPLGLEYLHQINQLTVCQHFDPLGVLRKFET--SKTYEILNNQVQRIYFA 66
           W+  P  + +CP GLEYL Q+     C     +G + +        Y I N + + +   
Sbjct: 99  WMPGPTPMANCPPGLEYLVQLE--VQCPPGVTIGFVAEHWNLCRAVYSIQNEKKENV--M 154

Query: 67  EERNNCFLRHLCGFSSPFTMTIYDNVGRDVLALHKALKCSLQKLLTLDEEMVIGKISKQY 126
             R  C   + CG  S F +   D +                          IG I +++
Sbjct: 155 RVRGPC-STYGCGSDSVFEVKSLDGISN------------------------IGSIIRKW 189

Query: 127 SGFVRGILTNGEKFGIQFPFDLDVKIKXLMLGATFLIEYMYFELWP 172
           +G +   + + + F I FP DLDVK+K ++ GA FLI++MYFE  P
Sbjct: 190 NGLL-SAMADADHFDIHFPLDLDVKMKAMIFGACFLIDFMYFERSP 234


>gi|119120894 Dmx-like 2 [Homo sapiens]
          Length = 3036

 Score = 31.2 bits (69), Expect = 0.46
 Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 13/88 (14%)

Query: 8    PWLSTPETITSCPLGLEY-LHQINQLT---VCQHF---DPLGVLRKFETSKTYEIL---- 56
            PWL T +T T   + ++  LH + ++T   V Q++      G +R FE ++  +++    
Sbjct: 2744 PWLGTGQTSTGASVLMKRNLHNVKRMTSHPVHQYYLTGAQDGSVRMFEWTRPQQLVCFRQ 2803

Query: 57   --NNQVQRIYFAEERNNCFLRHLCGFSS 82
              N +V R+YF  + N C +    GF S
Sbjct: 2804 AGNARVTRLYFNSQGNKCGVADGEGFLS 2831


>gi|8923271 coiled-coil domain containing 49 [Homo sapiens]
          Length = 425

 Score = 27.7 bits (60), Expect = 5.1
 Identities = 12/23 (52%), Positives = 16/23 (69%)

Query: 39  DPLGVLRKFETSKTYEILNNQVQ 61
           DPL ++RK E  K  E+LNN V+
Sbjct: 137 DPLFIIRKKEEEKKREVLNNPVK 159


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.143    0.442 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,175,227
Number of Sequences: 37866
Number of extensions: 237962
Number of successful extensions: 505
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 485
Number of HSP's gapped (non-prelim): 21
length of query: 172
length of database: 18,247,518
effective HSP length: 95
effective length of query: 77
effective length of database: 14,650,248
effective search space: 1128069096
effective search space used: 1128069096
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.