Search of human proteins with 118026935

Search of human proteins with 118026935

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|118026935 asparagine-linked glycosylation 9 protein isoform
d [Homo sapiens]
         (440 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|118026935 asparagine-linked glycosylation 9 protein isoform d...   914   0.0  
gi|118026933 asparagine-linked glycosylation 9 protein isoform b...   914   0.0  
gi|118026921 asparagine-linked glycosylation 9 protein isoform a...   907   0.0  
gi|118026937 asparagine-linked glycosylation 9 protein isoform c...   907   0.0  
gi|110224465 phosphatidylinositol glycan, class B [Homo sapiens]       44   3e-04
gi|13129114 alpha-1,6-mannosyltransferase ALG12 [Homo sapiens]         43   5e-04
gi|226442779 jumonji domain containing 1A [Homo sapiens]               35   0.14 
gi|20357522 jumonji domain containing 1A [Homo sapiens]                35   0.14 
gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens]        30   5.7  
gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens]        30   5.7  
gi|9507143 G protein-coupled receptor 173 [Homo sapiens]               30   5.7  
gi|27734849 retinaldehyde binding protein 1-like 1 [Homo sapiens]      30   5.7  
gi|148228819 G protein-coupled receptor 89A isoform 1 [Homo sapi...    29   7.4  
gi|7706704 G protein-coupled receptor 89B [Homo sapiens]               29   7.4  

>gi|118026935 asparagine-linked glycosylation 9 protein isoform d
           [Homo sapiens]
          Length = 440

 Score =  914 bits (2361), Expect = 0.0
 Identities = 440/440 (100%), Positives = 440/440 (100%)

Query: 1   MMLAFLVLSTGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSA 60
           MMLAFLVLSTGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSA
Sbjct: 1   MMLAFLVLSTGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSA 60

Query: 61  ALGLPIAFDLLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFT 120
           ALGLPIAFDLLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFT
Sbjct: 61  ALGLPIAFDLLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFT 120

Query: 121 PHGPDLYGTEPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTL 180
           PHGPDLYGTEPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTL
Sbjct: 121 PHGPDLYGTEPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTL 180

Query: 181 APMYIWFIIFFIQPHKEERFLFPVYPLICLCGAVALSALQKCYHFVFQRYRLEHYTVTSN 240
           APMYIWFIIFFIQPHKEERFLFPVYPLICLCGAVALSALQKCYHFVFQRYRLEHYTVTSN
Sbjct: 181 APMYIWFIIFFIQPHKEERFLFPVYPLICLCGAVALSALQKCYHFVFQRYRLEHYTVTSN 240

Query: 241 WLALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKE 300
           WLALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKE
Sbjct: 241 WLALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKE 300

Query: 301 WYRFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDIS 360
           WYRFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDIS
Sbjct: 301 WYRFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDIS 360

Query: 361 KCHYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVY 420
           KCHYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVY
Sbjct: 361 KCHYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVY 420

Query: 421 VNYTILKPRKAKQIRKKSGG 440
           VNYTILKPRKAKQIRKKSGG
Sbjct: 421 VNYTILKPRKAKQIRKKSGG 440


>gi|118026933 asparagine-linked glycosylation 9 protein isoform b
           [Homo sapiens]
          Length = 611

 Score =  914 bits (2361), Expect = 0.0
 Identities = 440/440 (100%), Positives = 440/440 (100%)

Query: 1   MMLAFLVLSTGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSA 60
           MMLAFLVLSTGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSA
Sbjct: 172 MMLAFLVLSTGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSA 231

Query: 61  ALGLPIAFDLLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFT 120
           ALGLPIAFDLLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFT
Sbjct: 232 ALGLPIAFDLLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFT 291

Query: 121 PHGPDLYGTEPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTL 180
           PHGPDLYGTEPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTL
Sbjct: 292 PHGPDLYGTEPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTL 351

Query: 181 APMYIWFIIFFIQPHKEERFLFPVYPLICLCGAVALSALQKCYHFVFQRYRLEHYTVTSN 240
           APMYIWFIIFFIQPHKEERFLFPVYPLICLCGAVALSALQKCYHFVFQRYRLEHYTVTSN
Sbjct: 352 APMYIWFIIFFIQPHKEERFLFPVYPLICLCGAVALSALQKCYHFVFQRYRLEHYTVTSN 411

Query: 241 WLALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKE 300
           WLALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKE
Sbjct: 412 WLALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKE 471

Query: 301 WYRFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDIS 360
           WYRFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDIS
Sbjct: 472 WYRFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDIS 531

Query: 361 KCHYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVY 420
           KCHYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVY
Sbjct: 532 KCHYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVY 591

Query: 421 VNYTILKPRKAKQIRKKSGG 440
           VNYTILKPRKAKQIRKKSGG
Sbjct: 592 VNYTILKPRKAKQIRKKSGG 611


>gi|118026921 asparagine-linked glycosylation 9 protein isoform a
           [Homo sapiens]
          Length = 618

 Score =  907 bits (2343), Expect = 0.0
 Identities = 440/447 (98%), Positives = 440/447 (98%), Gaps = 7/447 (1%)

Query: 1   MMLAFLVLSTGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSA 60
           MMLAFLVLSTGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSA
Sbjct: 172 MMLAFLVLSTGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSA 231

Query: 61  ALGLPIAFDLLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFT 120
           ALGLPIAFDLLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFT
Sbjct: 232 ALGLPIAFDLLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFT 291

Query: 121 PHGPDLYGTEPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTL 180
           PHGPDLYGTEPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTL
Sbjct: 292 PHGPDLYGTEPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTL 351

Query: 181 APMYIWFIIFFIQPHKEERFLFPVYPLICLCGAVALSALQ-------KCYHFVFQRYRLE 233
           APMYIWFIIFFIQPHKEERFLFPVYPLICLCGAVALSALQ       KCYHFVFQRYRLE
Sbjct: 352 APMYIWFIIFFIQPHKEERFLFPVYPLICLCGAVALSALQHSFLYFQKCYHFVFQRYRLE 411

Query: 234 HYTVTSNWLALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPV 293
           HYTVTSNWLALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPV
Sbjct: 412 HYTVTSNWLALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPV 471

Query: 294 NVCVGKEWYRFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEP 353
           NVCVGKEWYRFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEP
Sbjct: 472 NVCVGKEWYRFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEP 531

Query: 354 SRYIDISKCHYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFL 413
           SRYIDISKCHYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFL
Sbjct: 532 SRYIDISKCHYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFL 591

Query: 414 SDQYTVYVNYTILKPRKAKQIRKKSGG 440
           SDQYTVYVNYTILKPRKAKQIRKKSGG
Sbjct: 592 SDQYTVYVNYTILKPRKAKQIRKKSGG 618


>gi|118026937 asparagine-linked glycosylation 9 protein isoform c
           [Homo sapiens]
          Length = 447

 Score =  907 bits (2343), Expect = 0.0
 Identities = 440/447 (98%), Positives = 440/447 (98%), Gaps = 7/447 (1%)

Query: 1   MMLAFLVLSTGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSA 60
           MMLAFLVLSTGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSA
Sbjct: 1   MMLAFLVLSTGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSA 60

Query: 61  ALGLPIAFDLLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFT 120
           ALGLPIAFDLLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFT
Sbjct: 61  ALGLPIAFDLLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFT 120

Query: 121 PHGPDLYGTEPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTL 180
           PHGPDLYGTEPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTL
Sbjct: 121 PHGPDLYGTEPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTL 180

Query: 181 APMYIWFIIFFIQPHKEERFLFPVYPLICLCGAVALSALQ-------KCYHFVFQRYRLE 233
           APMYIWFIIFFIQPHKEERFLFPVYPLICLCGAVALSALQ       KCYHFVFQRYRLE
Sbjct: 181 APMYIWFIIFFIQPHKEERFLFPVYPLICLCGAVALSALQHSFLYFQKCYHFVFQRYRLE 240

Query: 234 HYTVTSNWLALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPV 293
           HYTVTSNWLALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPV
Sbjct: 241 HYTVTSNWLALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPV 300

Query: 294 NVCVGKEWYRFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEP 353
           NVCVGKEWYRFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEP
Sbjct: 301 NVCVGKEWYRFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEP 360

Query: 354 SRYIDISKCHYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFL 413
           SRYIDISKCHYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFL
Sbjct: 361 SRYIDISKCHYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFL 420

Query: 414 SDQYTVYVNYTILKPRKAKQIRKKSGG 440
           SDQYTVYVNYTILKPRKAKQIRKKSGG
Sbjct: 421 SDQYTVYVNYTILKPRKAKQIRKKSGG 447


>gi|110224465 phosphatidylinositol glycan, class B [Homo sapiens]
          Length = 554

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 42/174 (24%), Positives = 72/174 (41%), Gaps = 19/174 (10%)

Query: 42  SIAVLGVAAGAILGWPFSAALGLPIAFDLLVMKHRWKSFF-HWSLMALILFLVPVVVIDS 100
           S+    + A A +  P +  L  P+ F     + R      H  L    + L   ++ID 
Sbjct: 218 SVKYSSLVALAFIIRPTAVILWTPLLFRHFCQEPRKLDLILHHFLPVGFVTLSLSLMIDR 277

Query: 101 YYYGKLVIAPLNIVLYNVFTPHGPDLYGTEPWYFYLINGFLNFNVAFALALLVLPLTSLM 160
            ++G+  +   N + +NV    G   YG+ PW++Y   GF            V+  T L 
Sbjct: 278 IFFGQWTLVQFNFLKFNVLQNWGT-FYGSHPWHWYFSQGFP-----------VILGTHLP 325

Query: 161 EYLLQRFHVQNLGHPYWLTLAPMYIW-FIIFFIQPHKEERFLFPVYPL-ICLCG 212
            ++    H   L    +  L    +W  +++ +  HKE RF++PV P  +  CG
Sbjct: 326 FFI----HGCYLAPKRYRILLVTVLWTLLVYSMLSHKEFRFIYPVLPFCMVFCG 375


>gi|13129114 alpha-1,6-mannosyltransferase ALG12 [Homo sapiens]
          Length = 488

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 38/215 (17%)

Query: 20  LPSSFCMYTTLIAMTGW---------YMDKTSIAVLGVAAGAILGWPFSAALGLPIAFDL 70
           LP+   +   L+A+  W         ++   +I V  V     LG     ALG      +
Sbjct: 148 LPNVLALPVVLLALAAWLRHEWARFIWLSAFAIIVFRVELCLFLGLLLLLALGNRKVSVV 207

Query: 71  LVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGTE 130
             ++H        ++ A IL L   V +DSY++ +L      ++ YN       + +GT 
Sbjct: 208 RALRH--------AVPAGILCLGLTVAVDSYFWRQLTWPEGKVLWYNTVLNKSSN-WGTS 258

Query: 131 P--WYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFI 188
           P  WYFY              +LL +PL  L++   +R H      P  L L  M ++ +
Sbjct: 259 PLLWYFYSA-----LPRGLGCSLLFIPL-GLVD---RRTHA-----PTVLALGFMALYSL 304

Query: 189 IFFIQPHKEERFLFPVYPLICLCGAVALSALQKCY 223
           +    PHKE RF+   +P++ +  A   S L   Y
Sbjct: 305 L----PHKELRFIIYAFPMLNITAARGCSYLLNNY 335


>gi|226442779 jumonji domain containing 1A [Homo sapiens]
          Length = 1321

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 3/65 (4%)

Query: 364 YLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVNY 423
           +LV+ + +    + P+ S    +W ++ Y+P LD +    +     V FL DQ  V+++ 
Sbjct: 88  FLVEHNLVLAERKSPEISERIVQWPAITYKPLLDKAGLGSITS---VRFLGDQQRVFLSK 144

Query: 424 TILKP 428
            +LKP
Sbjct: 145 DLLKP 149


>gi|20357522 jumonji domain containing 1A [Homo sapiens]
          Length = 1321

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 3/65 (4%)

Query: 364 YLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVNY 423
           +LV+ + +    + P+ S    +W ++ Y+P LD +    +     V FL DQ  V+++ 
Sbjct: 88  FLVEHNLVLAERKSPEISERIVQWPAITYKPLLDKAGLGSITS---VRFLGDQQRVFLSK 144

Query: 424 TILKP 428
            +LKP
Sbjct: 145 DLLKP 149


>gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens]
          Length = 1337

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 16/109 (14%)

Query: 218 ALQKCYHFVFQRYRLEHYTVTSNWLALGTVFLFG---LLSFSRSVALFRGY----HGPLD 270
           A++ C        RL HY +T   ++  T FL     ++ +     +F G+    H PL 
Sbjct: 520 AIKPCRPMTNNAGRLFHYRIT---VSPPTNFLTDRPTVIEYDDHEYIFEGFSMFAHAPLT 576

Query: 271 LYP--EFYRIATDPTIHTVPEGRPVNVCV-GKEWYRFPSSFLLPDNWQL 316
             P  +  R   D TIH + E  P N CV G E +   S FL  D  +L
Sbjct: 577 NIPLCKVIRFNIDYTIHFIEEMMPENFCVKGLELF---SLFLFRDILEL 622


>gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens]
          Length = 1374

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 16/109 (14%)

Query: 218 ALQKCYHFVFQRYRLEHYTVTSNWLALGTVFLFG---LLSFSRSVALFRGY----HGPLD 270
           A++ C        RL HY +T   ++  T FL     ++ +     +F G+    H PL 
Sbjct: 557 AIKPCRPMTNNAGRLFHYRIT---VSPPTNFLTDRPTVIEYDDHEYIFEGFSMFAHAPLT 613

Query: 271 LYP--EFYRIATDPTIHTVPEGRPVNVCV-GKEWYRFPSSFLLPDNWQL 316
             P  +  R   D TIH + E  P N CV G E +   S FL  D  +L
Sbjct: 614 NIPLCKVIRFNIDYTIHFIEEMMPENFCVKGLELF---SLFLFRDILEL 659


>gi|9507143 G protein-coupled receptor 173 [Homo sapiens]
          Length = 373

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 33/151 (21%)

Query: 2   MLAFLVLSTGMFCSSSAFLPSSFCMYTT---LIAMTGWYMDKTSIAVLGVAAGAILGWPF 58
           ++AF+ +   +FC  +AF+   FC+  T    IA   +Y  + ++     AA   + W  
Sbjct: 98  IVAFMAV---LFCFHAAFM--LFCISVTRYMAIAHHRFYAKRMTLWTC--AAVICMAWTL 150

Query: 59  SAALGLPIAFDL-----------LVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLV 107
           S A+  P  FD+            + +HR+  F     +  +L L  ++      YGKL+
Sbjct: 151 SVAMAFPPVFDVGTYKFIREEDQCIFEHRY--FKANDTLGFMLMLAVLMAATHAVYGKLL 208

Query: 108 I--------APLNIV--LYNVFTPHGPDLYG 128
           +         P+ +V  +   +T HGP   G
Sbjct: 209 LFEYRHRKMKPVQMVPAISQNWTFHGPGATG 239


>gi|27734849 retinaldehyde binding protein 1-like 1 [Homo sapiens]
          Length = 354

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)

Query: 317 QFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQN 349
           +F+PSEF G LP P+  G  A  ++  D +D+N
Sbjct: 265 EFLPSEFGGTLP-PYDMGTWARTLLGPDYSDEN 296


>gi|148228819 G protein-coupled receptor 89A isoform 1 [Homo
           sapiens]
          Length = 455

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 12/57 (21%), Positives = 31/57 (54%), Gaps = 1/57 (1%)

Query: 58  FSAALGLPIAFDLLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIV 114
           FS  +   I F++L + +    +FHW +   ++ L+ V ++  +Y G  +++ + ++
Sbjct: 50  FSCTMFELIIFEILGVLNSSSRYFHWKMNLCVILLILVFMV-PFYIGYFIVSNIRLL 105


>gi|7706704 G protein-coupled receptor 89B [Homo sapiens]
          Length = 455

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 12/57 (21%), Positives = 31/57 (54%), Gaps = 1/57 (1%)

Query: 58  FSAALGLPIAFDLLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIV 114
           FS  +   I F++L + +    +FHW +   ++ L+ V ++  +Y G  +++ + ++
Sbjct: 50  FSCTMFELIIFEILGVLNSSSRYFHWKMNLCVILLILVFMV-PFYIGYFIVSNIRLL 105


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.328    0.143    0.466 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,980,642
Number of Sequences: 37866
Number of extensions: 772720
Number of successful extensions: 1950
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1937
Number of HSP's gapped (non-prelim): 15
length of query: 440
length of database: 18,247,518
effective HSP length: 105
effective length of query: 335
effective length of database: 14,271,588
effective search space: 4780981980
effective search space used: 4780981980
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.