Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239748594
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239748594 PREDICTED: hypothetical protein XP_002346735 [Homo
sapiens]
(262 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239748594 PREDICTED: hypothetical protein XP_002346735 [Homo ... 536 e-153
gi|4503323 dihydrofolate reductase [Homo sapiens] 383 e-107
gi|28827793 dihydrofolate reductase-like 1 [Homo sapiens] 345 2e-95
gi|153285461 fibroblast growth factor 2 [Homo sapiens] 39 0.005
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] 33 0.19
gi|239753916 PREDICTED: hypothetical protein XP_002345830 [Homo ... 32 0.56
gi|190358543 hypothetical protein LOC57654 [Homo sapiens] 32 0.56
gi|239752488 PREDICTED: FLJ40296 protein family member [Homo sap... 32 0.73
gi|27436957 membrane associated guanylate kinase, WW and PDZ dom... 32 0.73
gi|38348198 proline rich 20 [Homo sapiens] 32 0.73
gi|150417999 ubiquitin-conjugating enzyme E2Z [Homo sapiens] 32 0.73
gi|194353955 hypothetical protein LOC729250 [Homo sapiens] 32 0.73
gi|194353953 hypothetical protein LOC729246 [Homo sapiens] 32 0.73
gi|194353951 hypothetical protein LOC729240 [Homo sapiens] 32 0.73
gi|194353949 hypothetical protein LOC729233 [Homo sapiens] 32 0.73
gi|18375613 dachshund homolog 1 isoform b [Homo sapiens] 31 0.96
gi|18375611 dachshund homolog 1 isoform a [Homo sapiens] 31 0.96
gi|18375609 dachshund homolog 1 isoform c [Homo sapiens] 31 0.96
gi|169207282 PREDICTED: hypothetical protein [Homo sapiens] 31 0.96
gi|239754876 PREDICTED: hypothetical protein [Homo sapiens] 31 0.96
gi|169211642 PREDICTED: hypothetical protein [Homo sapiens] 31 0.96
gi|169207648 PREDICTED: hypothetical protein [Homo sapiens] 31 0.96
gi|239749414 PREDICTED: hypothetical protein [Homo sapiens] 31 0.96
gi|169210857 PREDICTED: similar to RIKEN cDNA E130309D14 [Homo s... 31 0.96
gi|239744958 PREDICTED: hypothetical protein XP_002343344 [Homo ... 31 0.96
gi|239743550 PREDICTED: hypothetical protein [Homo sapiens] 31 0.96
gi|239754516 PREDICTED: hypothetical protein [Homo sapiens] 31 1.3
gi|239749077 PREDICTED: hypothetical protein XP_002346898 [Homo ... 31 1.3
gi|239743103 PREDICTED: hypothetical protein XP_002342755 [Homo ... 31 1.3
gi|239508758 PREDICTED: hypothetical protein [Homo sapiens] 31 1.3
>gi|239748594 PREDICTED: hypothetical protein XP_002346735 [Homo
sapiens]
Length = 262
Score = 536 bits (1381), Expect = e-153
Identities = 262/262 (100%), Positives = 262/262 (100%)
Query: 1 MAARRQGPARSANPRPQFPGVCGREHAATLRAPGRGGGASPAQIGTRGRGGHNFAPNLTA 60
MAARRQGPARSANPRPQFPGVCGREHAATLRAPGRGGGASPAQIGTRGRGGHNFAPNLTA
Sbjct: 1 MAARRQGPARSANPRPQFPGVCGREHAATLRAPGRGGGASPAQIGTRGRGGHNFAPNLTA 60
Query: 61 RSAVTSGLGGPPAAVMVGSLNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFQRMTTTSSVE 120
RSAVTSGLGGPPAAVMVGSLNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFQRMTTTSSVE
Sbjct: 61 RSAVTSGLGGPPAAVMVGSLNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFQRMTTTSSVE 120
Query: 121 GKQNLVIMGKKTWFSIPEKNRPLKGRINLVLSRELKEPPQGAHFLSRSLDDALKLTEQPE 180
GKQNLVIMGKKTWFSIPEKNRPLKGRINLVLSRELKEPPQGAHFLSRSLDDALKLTEQPE
Sbjct: 121 GKQNLVIMGKKTWFSIPEKNRPLKGRINLVLSRELKEPPQGAHFLSRSLDDALKLTEQPE 180
Query: 181 LANKVDMVWIVGGSSVYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYPG 240
LANKVDMVWIVGGSSVYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYPG
Sbjct: 181 LANKVDMVWIVGGSSVYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYPG 240
Query: 241 VLSDVQEEKGIKYKFEVYEKND 262
VLSDVQEEKGIKYKFEVYEKND
Sbjct: 241 VLSDVQEEKGIKYKFEVYEKND 262
>gi|4503323 dihydrofolate reductase [Homo sapiens]
Length = 187
Score = 383 bits (984), Expect = e-107
Identities = 187/187 (100%), Positives = 187/187 (100%)
Query: 76 MVGSLNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFQRMTTTSSVEGKQNLVIMGKKTWFS 135
MVGSLNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFQRMTTTSSVEGKQNLVIMGKKTWFS
Sbjct: 1 MVGSLNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFQRMTTTSSVEGKQNLVIMGKKTWFS 60
Query: 136 IPEKNRPLKGRINLVLSRELKEPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSS 195
IPEKNRPLKGRINLVLSRELKEPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSS
Sbjct: 61 IPEKNRPLKGRINLVLSRELKEPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSS 120
Query: 196 VYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYPGVLSDVQEEKGIKYKF 255
VYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYPGVLSDVQEEKGIKYKF
Sbjct: 121 VYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYPGVLSDVQEEKGIKYKF 180
Query: 256 EVYEKND 262
EVYEKND
Sbjct: 181 EVYEKND 187
>gi|28827793 dihydrofolate reductase-like 1 [Homo sapiens]
Length = 187
Score = 345 bits (886), Expect = 2e-95
Identities = 171/183 (93%), Positives = 176/183 (96%)
Query: 80 LNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFQRMTTTSSVEGKQNLVIMGKKTWFSIPEK 139
LNCIVAVSQNMGIGKNGDLP PPLRNEFRYFQRMTTTSSVEGKQNLVIMG+KTWFSIPEK
Sbjct: 5 LNCIVAVSQNMGIGKNGDLPRPPLRNEFRYFQRMTTTSSVEGKQNLVIMGRKTWFSIPEK 64
Query: 140 NRPLKGRINLVLSRELKEPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSSVYKE 199
NRPLK RINLVLSRELKEPPQGAHFL+RSLDDALKLTE+PELANKVDM+WIVGGSSVYKE
Sbjct: 65 NRPLKDRINLVLSRELKEPPQGAHFLARSLDDALKLTERPELANKVDMIWIVGGSSVYKE 124
Query: 200 AMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYPGVLSDVQEEKGIKYKFEVYE 259
AMNH GHLKLFVTRIMQDFESDTFF EIDLEKYKLLPEYPGVLSDVQE K IKYKFEV E
Sbjct: 125 AMNHLGHLKLFVTRIMQDFESDTFFSEIDLEKYKLLPEYPGVLSDVQEGKHIKYKFEVCE 184
Query: 260 KND 262
K+D
Sbjct: 185 KDD 187
>gi|153285461 fibroblast growth factor 2 [Homo sapiens]
Length = 288
Score = 38.9 bits (89), Expect = 0.005
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 31 RAPGRGGGASPAQIGTRGRGGHNFAPNLTARSAVTSGLGGPPAAVMVGSLNCIVAVSQNM 90
R GRG G +P ++G RGRG AP A A GP + GS+ + A+ ++
Sbjct: 92 RLGGRGRGRAPERVGGRGRGRGTAAPR--AAPAARGSRPGPAGTMAAGSITTLPALPEDG 149
Query: 91 GIG 93
G G
Sbjct: 150 GSG 152
>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
Length = 480
Score = 33.5 bits (75), Expect = 0.19
Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 2 AARRQGPARSANPRPQFPGVCGREHAATLRAPGRGGGASPAQIG 45
A R +R+A RP PG G E AA RAPG GGG +P +G
Sbjct: 250 ALSRASRSRAAG-RPG-PGFHGGEKAAAPRAPGGGGGRNPGALG 291
>gi|239753916 PREDICTED: hypothetical protein XP_002345830 [Homo
sapiens]
Length = 233
Score = 32.0 bits (71), Expect = 0.56
Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Query: 5 RQGPARSANPRPQFPGVCGREHAATLRAPGRGGGASPAQIGTRGRGGHNFAPNLTAR--S 62
R+ PAR N RP+ R A +R PAQ +GRG F P +
Sbjct: 157 RRPPARWGNERPRLSFWFPRLPAWGVRGGAGPASPEPAQRARQGRGFSRFTPVRRRKLVG 216
Query: 63 AVTSGLGGPPAAVMVG 78
A T GLG + VG
Sbjct: 217 AATPGLGPESGSEAVG 232
>gi|190358543 hypothetical protein LOC57654 [Homo sapiens]
Length = 709
Score = 32.0 bits (71), Expect = 0.56
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 3 ARRQGPARSANPRPQF--PGVCGREHAATLRAPGRGGGASPAQIGT 46
A + GP RS P P+ C R+ A+ P GGGA P+Q T
Sbjct: 232 AGQVGPCRSGTPDPRDGEQPCCSRDLPASAGHPRAGGGAQPSQTAT 277
>gi|239752488 PREDICTED: FLJ40296 protein family member [Homo
sapiens]
Length = 221
Score = 31.6 bits (70), Expect = 0.73
Identities = 31/97 (31%), Positives = 37/97 (38%), Gaps = 26/97 (26%)
Query: 4 RRQGPARSANPRPQFPGVCGREHAATLRAPGRGGG--ASPA------------------- 42
RRQ PAR +P P GR + R PGRG G A P
Sbjct: 59 RRQPPARPESPPP---AERGRRRGGS-RRPGRGRGRRAGPRGDAGQRQGAEGLMAPDVHI 114
Query: 43 QIGTRGRGGHNFAPNLTARSAVT-SGLGGPPAAVMVG 78
Q+ G GH P +T +A + S G PP V G
Sbjct: 115 QLDHHGEPGHQGEPEITETAAFSLSETGPPPGTVQEG 151
>gi|27436957 membrane associated guanylate kinase, WW and PDZ domain
containing 2 [Homo sapiens]
Length = 1455
Score = 31.6 bits (70), Expect = 0.73
Identities = 24/73 (32%), Positives = 29/73 (39%), Gaps = 3/73 (4%)
Query: 4 RRQGPARSANPR-PQFPGVCGREHAATLRAPGRGGGASPAQIGTRGRGGHNFAPNLTARS 62
R P R+A PR + PG GR A + R G + A R G AP A S
Sbjct: 1316 RSASPQRAARPRLEEAPGGQGRPEAGRPASEARAPGLAAADAADAARAGGKEAPRAAAGS 1375
Query: 63 AV--TSGLGGPPA 73
+ G G PA
Sbjct: 1376 ELCRREGPGAAPA 1388
>gi|38348198 proline rich 20 [Homo sapiens]
Length = 221
Score = 31.6 bits (70), Expect = 0.73
Identities = 31/97 (31%), Positives = 37/97 (38%), Gaps = 26/97 (26%)
Query: 4 RRQGPARSANPRPQFPGVCGREHAATLRAPGRGGG--ASPA------------------- 42
RRQ PAR +P P GR + R PGRG G A P
Sbjct: 59 RRQPPARPESPPP---AERGRRRGGS-RRPGRGRGRRAGPRGDAGQRQGAEGLMAPDVHI 114
Query: 43 QIGTRGRGGHNFAPNLTARSAVT-SGLGGPPAAVMVG 78
Q+ G GH P +T +A + S G PP V G
Sbjct: 115 QLDHHGEPGHQGEPEITETAAFSLSETGPPPGTVQEG 151
>gi|150417999 ubiquitin-conjugating enzyme E2Z [Homo sapiens]
Length = 354
Score = 31.6 bits (70), Expect = 0.73
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Query: 25 EHAATLRAPGRGGGASPAQ--IGTRGRGGH---NFAPNLTARSAVTSGLGGP 71
E AAT A G GAS +G G GG F P++ A +A G GGP
Sbjct: 7 EEAATAGAGAAGPGASSVAGVVGVSGSGGGFGPPFLPDVWAAAAAAGGAGGP 58
>gi|194353955 hypothetical protein LOC729250 [Homo sapiens]
Length = 221
Score = 31.6 bits (70), Expect = 0.73
Identities = 31/97 (31%), Positives = 37/97 (38%), Gaps = 26/97 (26%)
Query: 4 RRQGPARSANPRPQFPGVCGREHAATLRAPGRGGG--ASPA------------------- 42
RRQ PAR +P P GR + R PGRG G A P
Sbjct: 59 RRQPPARPESPPP---AERGRRRGGS-RRPGRGRGRRAGPRGDAGQRQGAEGLMAPDVHI 114
Query: 43 QIGTRGRGGHNFAPNLTARSAVT-SGLGGPPAAVMVG 78
Q+ G GH P +T +A + S G PP V G
Sbjct: 115 QLDHHGEPGHQGEPEITETAAFSLSETGPPPGTVQEG 151
>gi|194353953 hypothetical protein LOC729246 [Homo sapiens]
Length = 221
Score = 31.6 bits (70), Expect = 0.73
Identities = 31/97 (31%), Positives = 37/97 (38%), Gaps = 26/97 (26%)
Query: 4 RRQGPARSANPRPQFPGVCGREHAATLRAPGRGGG--ASPA------------------- 42
RRQ PAR +P P GR + R PGRG G A P
Sbjct: 59 RRQPPARPESPPP---AERGRRRGGS-RRPGRGRGRRAGPRGDAGQRQGAEGLMAPDVHI 114
Query: 43 QIGTRGRGGHNFAPNLTARSAVT-SGLGGPPAAVMVG 78
Q+ G GH P +T +A + S G PP V G
Sbjct: 115 QLDHHGEPGHQGEPEITETAAFSLSETGPPPGTVQEG 151
>gi|194353951 hypothetical protein LOC729240 [Homo sapiens]
Length = 221
Score = 31.6 bits (70), Expect = 0.73
Identities = 31/97 (31%), Positives = 37/97 (38%), Gaps = 26/97 (26%)
Query: 4 RRQGPARSANPRPQFPGVCGREHAATLRAPGRGGG--ASPA------------------- 42
RRQ PAR +P P GR + R PGRG G A P
Sbjct: 59 RRQPPARPESPPP---AERGRRRGGS-RRPGRGRGRRAGPRGDAGQRQGAEGLMAPDVHI 114
Query: 43 QIGTRGRGGHNFAPNLTARSAVT-SGLGGPPAAVMVG 78
Q+ G GH P +T +A + S G PP V G
Sbjct: 115 QLDHHGEPGHQGEPEITETAAFSLSETGPPPGTVQEG 151
>gi|194353949 hypothetical protein LOC729233 [Homo sapiens]
Length = 221
Score = 31.6 bits (70), Expect = 0.73
Identities = 31/97 (31%), Positives = 37/97 (38%), Gaps = 26/97 (26%)
Query: 4 RRQGPARSANPRPQFPGVCGREHAATLRAPGRGGG--ASPA------------------- 42
RRQ PAR +P P GR + R PGRG G A P
Sbjct: 59 RRQPPARPESPPP---AERGRRRGGS-RRPGRGRGRRAGPRGDAGQRQGAEGLMAPDVHI 114
Query: 43 QIGTRGRGGHNFAPNLTARSAVT-SGLGGPPAAVMVG 78
Q+ G GH P +T +A + S G PP V G
Sbjct: 115 QLDHHGEPGHQGEPEITETAAFSLSETGPPPGTVQEG 151
>gi|18375613 dachshund homolog 1 isoform b [Homo sapiens]
Length = 558
Score = 31.2 bits (69), Expect = 0.96
Identities = 27/77 (35%), Positives = 33/77 (42%), Gaps = 14/77 (18%)
Query: 7 GPARSANP---RPQFPGVCGREHAATLRAPGRGGGASPAQIGTR----------GRGGHN 53
GP S+ P RP+ P AAT+ + G GGG + G G GG N
Sbjct: 45 GPPASSGPTLFRPE-PIASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSN 103
Query: 54 FAPNLTARSAVTSGLGG 70
PNL A S + G GG
Sbjct: 104 CNPNLAAASNGSGGGGG 120
>gi|18375611 dachshund homolog 1 isoform a [Homo sapiens]
Length = 706
Score = 31.2 bits (69), Expect = 0.96
Identities = 27/77 (35%), Positives = 33/77 (42%), Gaps = 14/77 (18%)
Query: 7 GPARSANP---RPQFPGVCGREHAATLRAPGRGGGASPAQIGTR----------GRGGHN 53
GP S+ P RP+ P AAT+ + G GGG + G G GG N
Sbjct: 45 GPPASSGPTLFRPE-PIASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSN 103
Query: 54 FAPNLTARSAVTSGLGG 70
PNL A S + G GG
Sbjct: 104 CNPNLAAASNGSGGGGG 120
>gi|18375609 dachshund homolog 1 isoform c [Homo sapiens]
Length = 504
Score = 31.2 bits (69), Expect = 0.96
Identities = 27/77 (35%), Positives = 33/77 (42%), Gaps = 14/77 (18%)
Query: 7 GPARSANP---RPQFPGVCGREHAATLRAPGRGGGASPAQIGTR----------GRGGHN 53
GP S+ P RP+ P AAT+ + G GGG + G G GG N
Sbjct: 45 GPPASSGPTLFRPE-PIASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSN 103
Query: 54 FAPNLTARSAVTSGLGG 70
PNL A S + G GG
Sbjct: 104 CNPNLAAASNGSGGGGG 120
>gi|169207282 PREDICTED: hypothetical protein [Homo sapiens]
Length = 95
Score = 31.2 bits (69), Expect = 0.96
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 13/49 (26%)
Query: 3 ARRQGPARSANPRPQFPGVCGREHAATLRAPGRGGGASPAQIGTRGRGG 51
A R GP R+ PRP PGV P RG G+ A+ G++ +GG
Sbjct: 53 ASRHGPRRA--PRPPAPGV-----------PSRGRGSGDARRGSQAQGG 88
>gi|239754876 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 31.2 bits (69), Expect = 0.96
Identities = 42/158 (26%), Positives = 61/158 (38%), Gaps = 28/158 (17%)
Query: 19 PGVCGREHAATLRAPGRGGGASPAQIGTRGRGGHNFAPNLTARSAVTSGLGGPPAAVMVG 78
PG G + A PG GG GR G + AR +S G P ++
Sbjct: 50 PGAVGCTYCAKTARPGGGG---------NGRPGFSAESQWEARCPKSSTRLGMP--FILF 98
Query: 79 SLNCIVAVSQNMGIGKNG-------DLPWPPLRNEF------RYFQRMTTTSSVEGKQNL 125
L ++A++ GK+G W N+ R+ RM + ++NL
Sbjct: 99 QLLTVMALAIMSFPGKDGFSSVFSATAEWTSTMNQVSAALGTRFKHRMVAEQGLGRRENL 158
Query: 126 VI-MGKKTWFSIPEKNRPLKGRINL---VLSRELKEPP 159
+ FS K PLK +I+L VL R+L E P
Sbjct: 159 KMDQPGSNAFSQRHKKMPLKQKIHLHFCVLLRQLSEHP 196
>gi|169211642 PREDICTED: hypothetical protein [Homo sapiens]
Length = 378
Score = 31.2 bits (69), Expect = 0.96
Identities = 25/70 (35%), Positives = 29/70 (41%), Gaps = 7/70 (10%)
Query: 2 AARRQGPARSANPRPQFPGVCGREHAATLRAPGRGGGASPAQIGTRGRGGHNFAPNLTAR 61
AA+R PA +A+P P RA G G GA A + GRGG AR
Sbjct: 245 AAQRPQPAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGG-------PAR 297
Query: 62 SAVTSGLGGP 71
A S GP
Sbjct: 298 DAARSPQAGP 307
>gi|169207648 PREDICTED: hypothetical protein [Homo sapiens]
Length = 95
Score = 31.2 bits (69), Expect = 0.96
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 13/49 (26%)
Query: 3 ARRQGPARSANPRPQFPGVCGREHAATLRAPGRGGGASPAQIGTRGRGG 51
A R GP R+ PRP PGV P RG G+ A+ G++ +GG
Sbjct: 53 ASRHGPRRA--PRPPAPGV-----------PSRGRGSGDARRGSQAQGG 88
>gi|239749414 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 31.2 bits (69), Expect = 0.96
Identities = 42/158 (26%), Positives = 61/158 (38%), Gaps = 28/158 (17%)
Query: 19 PGVCGREHAATLRAPGRGGGASPAQIGTRGRGGHNFAPNLTARSAVTSGLGGPPAAVMVG 78
PG G + A PG GG GR G + AR +S G P ++
Sbjct: 50 PGAVGCTYCAKTARPGGGG---------NGRPGFSAESQWEARCPKSSTRLGMP--FILF 98
Query: 79 SLNCIVAVSQNMGIGKNG-------DLPWPPLRNEF------RYFQRMTTTSSVEGKQNL 125
L ++A++ GK+G W N+ R+ RM + ++NL
Sbjct: 99 QLLTVMALAIMSFPGKDGFSSVFSATAEWTSTMNQVSAALGTRFKHRMVAEQGLGRRENL 158
Query: 126 VI-MGKKTWFSIPEKNRPLKGRINL---VLSRELKEPP 159
+ FS K PLK +I+L VL R+L E P
Sbjct: 159 KMDQPGSNAFSQRHKKMPLKQKIHLHFCVLLRQLSEHP 196
>gi|169210857 PREDICTED: similar to RIKEN cDNA E130309D14 [Homo
sapiens]
Length = 378
Score = 31.2 bits (69), Expect = 0.96
Identities = 25/70 (35%), Positives = 29/70 (41%), Gaps = 7/70 (10%)
Query: 2 AARRQGPARSANPRPQFPGVCGREHAATLRAPGRGGGASPAQIGTRGRGGHNFAPNLTAR 61
AA+R PA +A+P P RA G G GA A + GRGG AR
Sbjct: 245 AAQRPQPAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGG-------PAR 297
Query: 62 SAVTSGLGGP 71
A S GP
Sbjct: 298 DAARSPQAGP 307
>gi|239744958 PREDICTED: hypothetical protein XP_002343344 [Homo
sapiens]
Length = 95
Score = 31.2 bits (69), Expect = 0.96
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 13/49 (26%)
Query: 3 ARRQGPARSANPRPQFPGVCGREHAATLRAPGRGGGASPAQIGTRGRGG 51
A R GP R+ PRP PGV P RG G+ A+ G++ +GG
Sbjct: 53 ASRHGPRRA--PRPPAPGV-----------PSRGRGSGDARRGSQAQGG 88
>gi|239743550 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 31.2 bits (69), Expect = 0.96
Identities = 42/158 (26%), Positives = 61/158 (38%), Gaps = 28/158 (17%)
Query: 19 PGVCGREHAATLRAPGRGGGASPAQIGTRGRGGHNFAPNLTARSAVTSGLGGPPAAVMVG 78
PG G + A PG GG GR G + AR +S G P ++
Sbjct: 50 PGAVGCTYCAKTARPGGGG---------NGRPGFSAESQWEARCPKSSTRLGMP--FILF 98
Query: 79 SLNCIVAVSQNMGIGKNG-------DLPWPPLRNEF------RYFQRMTTTSSVEGKQNL 125
L ++A++ GK+G W N+ R+ RM + ++NL
Sbjct: 99 QLLTVMALAIMSFPGKDGFSSVFSATAEWTSTMNQVSAALGTRFKHRMVAEQGLGRRENL 158
Query: 126 VI-MGKKTWFSIPEKNRPLKGRINL---VLSRELKEPP 159
+ FS K PLK +I+L VL R+L E P
Sbjct: 159 KMDQPGSNAFSQRHKKMPLKQKIHLHFCVLLRQLSEHP 196
>gi|239754516 PREDICTED: hypothetical protein [Homo sapiens]
Length = 334
Score = 30.8 bits (68), Expect = 1.3
Identities = 21/45 (46%), Positives = 23/45 (51%), Gaps = 10/45 (22%)
Query: 4 RRQGPARSANPRPQFPGVCGREHAATL-------RAPGRGGGASP 41
RR+GP R A PR Q + GR AA L R P RGGG P
Sbjct: 124 RREGPRRHAPPRKQ---LRGRRGAAGLVSAGHLGREPPRGGGPRP 165
>gi|239749077 PREDICTED: hypothetical protein XP_002346898 [Homo
sapiens]
Length = 334
Score = 30.8 bits (68), Expect = 1.3
Identities = 21/45 (46%), Positives = 23/45 (51%), Gaps = 10/45 (22%)
Query: 4 RRQGPARSANPRPQFPGVCGREHAATL-------RAPGRGGGASP 41
RR+GP R A PR Q + GR AA L R P RGGG P
Sbjct: 124 RREGPRRHAPPRKQ---LRGRRGAAGLVSAGHLGREPPRGGGLRP 165
>gi|239743103 PREDICTED: hypothetical protein XP_002342755 [Homo
sapiens]
Length = 329
Score = 30.8 bits (68), Expect = 1.3
Identities = 21/45 (46%), Positives = 23/45 (51%), Gaps = 10/45 (22%)
Query: 4 RRQGPARSANPRPQFPGVCGREHAATL-------RAPGRGGGASP 41
RR+GP R A PR Q + GR AA L R P RGGG P
Sbjct: 119 RREGPRRHAPPRKQ---LRGRRGAAGLVSAGHLGREPPRGGGLRP 160
>gi|239508758 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 30.8 bits (68), Expect = 1.3
Identities = 21/45 (46%), Positives = 23/45 (51%), Gaps = 10/45 (22%)
Query: 4 RRQGPARSANPRPQFPGVCGREHAATL-------RAPGRGGGASP 41
RR+GP R A PR Q + GR AA L R P RGGG P
Sbjct: 119 RREGPRRHAPPRKQ---LRGRRGAAGLVSAGHLGREPPRGGGLRP 160
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.136 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,607,369
Number of Sequences: 37866
Number of extensions: 581900
Number of successful extensions: 2004
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 1959
Number of HSP's gapped (non-prelim): 130
length of query: 262
length of database: 18,247,518
effective HSP length: 100
effective length of query: 162
effective length of database: 14,460,918
effective search space: 2342668716
effective search space used: 2342668716
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.