BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239748138 PREDICTED: hypothetical protein XP_002346536 [Homo sapiens] (151 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239753524 PREDICTED: hypothetical protein [Homo sapiens] 302 8e-83 gi|239748138 PREDICTED: hypothetical protein XP_002346536 [Homo ... 302 8e-83 gi|239742036 PREDICTED: hypothetical protein XP_002342376 [Homo ... 302 8e-83 gi|40806227 zinc finger protein 64 isoform c [Homo sapiens] 31 0.46 gi|40806225 zinc finger protein 64 isoform b [Homo sapiens] 31 0.46 gi|40806223 zinc finger protein 64 isoform a [Homo sapiens] 31 0.46 gi|4826730 FK506 binding protein 12-rapamycin associated protein... 29 1.7 gi|13899309 ribosomal protein S6 kinase-like 1 [Homo sapiens] 28 3.0 gi|85797660 limkain b1 [Homo sapiens] 28 3.0 gi|14211943 lysyl oxidase-like 3 precursor [Homo sapiens] 28 3.9 gi|47578107 delangin isoform B [Homo sapiens] 27 5.0 gi|47578105 delangin isoform A [Homo sapiens] 27 5.0 >gi|239753524 PREDICTED: hypothetical protein [Homo sapiens] Length = 151 Score = 302 bits (773), Expect = 8e-83 Identities = 151/151 (100%), Positives = 151/151 (100%) Query: 1 MVPACSGEEGVLGAQNRAYWFSSRICSMMLMRFSRPNTEHHVQVLETHLRPAVQAGLSPA 60 MVPACSGEEGVLGAQNRAYWFSSRICSMMLMRFSRPNTEHHVQVLETHLRPAVQAGLSPA Sbjct: 1 MVPACSGEEGVLGAQNRAYWFSSRICSMMLMRFSRPNTEHHVQVLETHLRPAVQAGLSPA 60 Query: 61 LLAIIDDKQGTGVEAVRGLPLQHSFQAPQFAQDRLKQVTSQVQAIVQILIEGIAEAFNGE 120 LLAIIDDKQGTGVEAVRGLPLQHSFQAPQFAQDRLKQVTSQVQAIVQILIEGIAEAFNGE Sbjct: 61 LLAIIDDKQGTGVEAVRGLPLQHSFQAPQFAQDRLKQVTSQVQAIVQILIEGIAEAFNGE 120 Query: 121 PTAIVLVPAEVMPCVQLVTHLHAADPDAQRG 151 PTAIVLVPAEVMPCVQLVTHLHAADPDAQRG Sbjct: 121 PTAIVLVPAEVMPCVQLVTHLHAADPDAQRG 151 >gi|239748138 PREDICTED: hypothetical protein XP_002346536 [Homo sapiens] Length = 151 Score = 302 bits (773), Expect = 8e-83 Identities = 151/151 (100%), Positives = 151/151 (100%) Query: 1 MVPACSGEEGVLGAQNRAYWFSSRICSMMLMRFSRPNTEHHVQVLETHLRPAVQAGLSPA 60 MVPACSGEEGVLGAQNRAYWFSSRICSMMLMRFSRPNTEHHVQVLETHLRPAVQAGLSPA Sbjct: 1 MVPACSGEEGVLGAQNRAYWFSSRICSMMLMRFSRPNTEHHVQVLETHLRPAVQAGLSPA 60 Query: 61 LLAIIDDKQGTGVEAVRGLPLQHSFQAPQFAQDRLKQVTSQVQAIVQILIEGIAEAFNGE 120 LLAIIDDKQGTGVEAVRGLPLQHSFQAPQFAQDRLKQVTSQVQAIVQILIEGIAEAFNGE Sbjct: 61 LLAIIDDKQGTGVEAVRGLPLQHSFQAPQFAQDRLKQVTSQVQAIVQILIEGIAEAFNGE 120 Query: 121 PTAIVLVPAEVMPCVQLVTHLHAADPDAQRG 151 PTAIVLVPAEVMPCVQLVTHLHAADPDAQRG Sbjct: 121 PTAIVLVPAEVMPCVQLVTHLHAADPDAQRG 151 >gi|239742036 PREDICTED: hypothetical protein XP_002342376 [Homo sapiens] Length = 151 Score = 302 bits (773), Expect = 8e-83 Identities = 151/151 (100%), Positives = 151/151 (100%) Query: 1 MVPACSGEEGVLGAQNRAYWFSSRICSMMLMRFSRPNTEHHVQVLETHLRPAVQAGLSPA 60 MVPACSGEEGVLGAQNRAYWFSSRICSMMLMRFSRPNTEHHVQVLETHLRPAVQAGLSPA Sbjct: 1 MVPACSGEEGVLGAQNRAYWFSSRICSMMLMRFSRPNTEHHVQVLETHLRPAVQAGLSPA 60 Query: 61 LLAIIDDKQGTGVEAVRGLPLQHSFQAPQFAQDRLKQVTSQVQAIVQILIEGIAEAFNGE 120 LLAIIDDKQGTGVEAVRGLPLQHSFQAPQFAQDRLKQVTSQVQAIVQILIEGIAEAFNGE Sbjct: 61 LLAIIDDKQGTGVEAVRGLPLQHSFQAPQFAQDRLKQVTSQVQAIVQILIEGIAEAFNGE 120 Query: 121 PTAIVLVPAEVMPCVQLVTHLHAADPDAQRG 151 PTAIVLVPAEVMPCVQLVTHLHAADPDAQRG Sbjct: 121 PTAIVLVPAEVMPCVQLVTHLHAADPDAQRG 151 >gi|40806227 zinc finger protein 64 isoform c [Homo sapiens] Length = 679 Score = 30.8 bits (68), Expect = 0.46 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 79 LPLQHSFQAPQFAQDRLKQVTSQVQAIVQILIEGIAEAFNGEPTAIVLVPAEVMP 133 +PLQ S Q PQF++ R+K + +++ A A N P A+V E +P Sbjct: 480 VPLQPS-QVPQFSEGRVKIIVGHQVPQANTIVQAAAAAVNIVPPALVAQNPEELP 533 >gi|40806225 zinc finger protein 64 isoform b [Homo sapiens] Length = 627 Score = 30.8 bits (68), Expect = 0.46 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 79 LPLQHSFQAPQFAQDRLKQVTSQVQAIVQILIEGIAEAFNGEPTAIVLVPAEVMP 133 +PLQ S Q PQF++ R+K + +++ A A N P A+V E +P Sbjct: 428 VPLQPS-QVPQFSEGRVKIIVGHQVPQANTIVQAAAAAVNIVPPALVAQNPEELP 481 >gi|40806223 zinc finger protein 64 isoform a [Homo sapiens] Length = 681 Score = 30.8 bits (68), Expect = 0.46 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 79 LPLQHSFQAPQFAQDRLKQVTSQVQAIVQILIEGIAEAFNGEPTAIVLVPAEVMP 133 +PLQ S Q PQF++ R+K + +++ A A N P A+V E +P Sbjct: 482 VPLQPS-QVPQFSEGRVKIIVGHQVPQANTIVQAAAAAVNIVPPALVAQNPEELP 535 >gi|4826730 FK506 binding protein 12-rapamycin associated protein 1 [Homo sapiens] Length = 2549 Score = 28.9 bits (63), Expect = 1.7 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%) Query: 26 CSMMLMRFSRPNTEHHVQVLETHLRPAVQAGLSPALLAIIDD 67 C ML R P + ++ L L P + GLSPAL A++ D Sbjct: 485 CISMLARAMGPGIQQDIKEL---LEPMLAVGLSPALTAVLYD 523 >gi|13899309 ribosomal protein S6 kinase-like 1 [Homo sapiens] Length = 541 Score = 28.1 bits (61), Expect = 3.0 Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 5/73 (6%) Query: 43 QVLETHLRPAVQAGLSPALLAIIDDKQGTGVEAVRGLPLQHSFQAPQFAQDRLKQVTSQV 102 ++ HL+ + +G SP+ + ++ D G V+ LP H +++RL + V Sbjct: 112 EIFNCHLQRPLSSGASPSAVQLVQDPATGGTFVVKSLPRCH-----MVSRERLTIIPHGV 166 Query: 103 QAIVQILIEGIAE 115 + ++L ++E Sbjct: 167 PYMTKLLRYFVSE 179 >gi|85797660 limkain b1 [Homo sapiens] Length = 1742 Score = 28.1 bits (61), Expect = 3.0 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%) Query: 72 GVEAVRGLPLQHSFQAPQFAQDRLKQVTSQVQAIVQILIEGIAEAFN 118 G+ + R L L H Q +F QD LK + S QA Q+++ ++A++ Sbjct: 1161 GMGSKRLLTLTHRAQVKRFTQDLLKLLKS--QASKQVIVREFSQAYH 1205 >gi|14211943 lysyl oxidase-like 3 precursor [Homo sapiens] Length = 753 Score = 27.7 bits (60), Expect = 3.9 Identities = 12/21 (57%), Positives = 14/21 (66%) Query: 39 EHHVQVLETHLRPAVQAGLSP 59 EHH+QV E +RPAV G P Sbjct: 161 EHHLQVEEVRIRPAVGWGRRP 181 >gi|47578107 delangin isoform B [Homo sapiens] Length = 2697 Score = 27.3 bits (59), Expect = 5.0 Identities = 12/31 (38%), Positives = 20/31 (64%) Query: 118 NGEPTAIVLVPAEVMPCVQLVTHLHAADPDA 148 +GEP I +V A V+ +Q V HL +++ D+ Sbjct: 1481 DGEPMYIQMVTALVLQLIQCVVHLPSSEKDS 1511 >gi|47578105 delangin isoform A [Homo sapiens] Length = 2804 Score = 27.3 bits (59), Expect = 5.0 Identities = 12/31 (38%), Positives = 20/31 (64%) Query: 118 NGEPTAIVLVPAEVMPCVQLVTHLHAADPDA 148 +GEP I +V A V+ +Q V HL +++ D+ Sbjct: 1481 DGEPMYIQMVTALVLQLIQCVVHLPSSEKDS 1511 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.321 0.134 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,644,536 Number of Sequences: 37866 Number of extensions: 218670 Number of successful extensions: 430 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 420 Number of HSP's gapped (non-prelim): 12 length of query: 151 length of database: 18,247,518 effective HSP length: 93 effective length of query: 58 effective length of database: 14,725,980 effective search space: 854106840 effective search space used: 854106840 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.