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Search of human proteins with 239747332
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747332 PREDICTED: hypothetical protein XP_002346425 [Homo
sapiens]
(191 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239747332 PREDICTED: hypothetical protein XP_002346425 [Homo ... 411 e-115
gi|239741157 PREDICTED: hypothetical protein XP_002342123 [Homo ... 411 e-115
gi|239752789 PREDICTED: similar to ATPase, H+ transporting, lyso... 409 e-115
gi|4502319 ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e... 136 1e-32
gi|154689666 ATPase, H+ transporting, V0 subunit isoform 1 [Homo... 102 2e-22
gi|154689796 ATPase, H+ transporting, V0 subunit isoform 2 [Homo... 57 1e-08
gi|116235482 glycosyltransferase-like 1B [Homo sapiens] 32 0.25
gi|239752668 PREDICTED: hypothetical protein [Homo sapiens] 32 0.43
gi|239741010 PREDICTED: hypothetical protein XP_002342053 [Homo ... 32 0.43
gi|19924141 like-glycosyltransferase [Homo sapiens] 30 0.97
gi|4758664 like-glycosyltransferase [Homo sapiens] 30 0.97
gi|106067657 luteinizing hormone/choriogonadotropin receptor pre... 30 1.7
gi|52353274 olfactory receptor, family 6, subfamily X, member 1 ... 29 2.2
gi|224994205 wolframin [Homo sapiens] 28 3.7
gi|224994203 wolframin [Homo sapiens] 28 3.7
gi|210032112 hydroxysteroid (17-beta) dehydrogenase 13 isoform B... 28 3.7
gi|210032110 hydroxysteroid (17-beta) dehydrogenase 13 isoform A... 28 3.7
gi|4559408 colony stimulating factor 2 receptor, beta precursor ... 28 4.8
gi|239755300 PREDICTED: similar to centaurin, gamma-like family,... 28 6.3
gi|148743791 solute carrier family 17 (sodium phosphate), member... 28 6.3
gi|148728191 solute carrier family 17 (sodium phosphate), member... 28 6.3
gi|52317150 olfactory receptor, family 51, subfamily D, member 1... 28 6.3
gi|4504503 hydroxysteroid (17-beta) dehydrogenase 2 [Homo sapiens] 27 8.2
gi|4507241 structure specific recognition protein 1 [Homo sapiens] 27 8.2
>gi|239747332 PREDICTED: hypothetical protein XP_002346425 [Homo
sapiens]
Length = 191
Score = 411 bits (1057), Expect = e-115
Identities = 191/191 (100%), Positives = 191/191 (100%)
Query: 1 MTTSSFLDSHKASGLLDSGAFSCVRSWNWHVKQSENKKHWSGTKFADQVMNILMCDHPFQ 60
MTTSSFLDSHKASGLLDSGAFSCVRSWNWHVKQSENKKHWSGTKFADQVMNILMCDHPFQ
Sbjct: 1 MTTSSFLDSHKASGLLDSGAFSCVRSWNWHVKQSENKKHWSGTKFADQVMNILMCDHPFQ 60
Query: 61 QLPTLNDWLANLFCFVADDMDAERVLSIPSHQDSLYSFRIKSSGLLQWQSWAYHSLMVLL 120
QLPTLNDWLANLFCFVADDMDAERVLSIPSHQDSLYSFRIKSSGLLQWQSWAYHSLMVLL
Sbjct: 61 QLPTLNDWLANLFCFVADDMDAERVLSIPSHQDSLYSFRIKSSGLLQWQSWAYHSLMVLL 120
Query: 121 IVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFCPLFGPQLKN 180
IVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFCPLFGPQLKN
Sbjct: 121 IVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFCPLFGPQLKN 180
Query: 181 ETSWYLRHHWP 191
ETSWYLRHHWP
Sbjct: 181 ETSWYLRHHWP 191
>gi|239741157 PREDICTED: hypothetical protein XP_002342123 [Homo
sapiens]
Length = 191
Score = 411 bits (1057), Expect = e-115
Identities = 191/191 (100%), Positives = 191/191 (100%)
Query: 1 MTTSSFLDSHKASGLLDSGAFSCVRSWNWHVKQSENKKHWSGTKFADQVMNILMCDHPFQ 60
MTTSSFLDSHKASGLLDSGAFSCVRSWNWHVKQSENKKHWSGTKFADQVMNILMCDHPFQ
Sbjct: 1 MTTSSFLDSHKASGLLDSGAFSCVRSWNWHVKQSENKKHWSGTKFADQVMNILMCDHPFQ 60
Query: 61 QLPTLNDWLANLFCFVADDMDAERVLSIPSHQDSLYSFRIKSSGLLQWQSWAYHSLMVLL 120
QLPTLNDWLANLFCFVADDMDAERVLSIPSHQDSLYSFRIKSSGLLQWQSWAYHSLMVLL
Sbjct: 61 QLPTLNDWLANLFCFVADDMDAERVLSIPSHQDSLYSFRIKSSGLLQWQSWAYHSLMVLL 120
Query: 121 IVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFCPLFGPQLKN 180
IVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFCPLFGPQLKN
Sbjct: 121 IVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFCPLFGPQLKN 180
Query: 181 ETSWYLRHHWP 191
ETSWYLRHHWP
Sbjct: 181 ETSWYLRHHWP 191
>gi|239752789 PREDICTED: similar to ATPase, H+ transporting,
lysosomal 9kDa, V0 subunit e1 [Homo sapiens]
Length = 191
Score = 409 bits (1052), Expect = e-115
Identities = 190/191 (99%), Positives = 190/191 (99%)
Query: 1 MTTSSFLDSHKASGLLDSGAFSCVRSWNWHVKQSENKKHWSGTKFADQVMNILMCDHPFQ 60
MTTSSFLDSHKASGLLDSGAFSCVRSWNWHVKQSENKKHWSGTKFADQVMNILMCDHPFQ
Sbjct: 1 MTTSSFLDSHKASGLLDSGAFSCVRSWNWHVKQSENKKHWSGTKFADQVMNILMCDHPFQ 60
Query: 61 QLPTLNDWLANLFCFVADDMDAERVLSIPSHQDSLYSFRIKSSGLLQWQSWAYHSLMVLL 120
QLPTLNDWLANLFCFVADDMDAERVLSIPSHQDSLYSFRIKSSGLLQWQ WAYHSLMVLL
Sbjct: 61 QLPTLNDWLANLFCFVADDMDAERVLSIPSHQDSLYSFRIKSSGLLQWQPWAYHSLMVLL 120
Query: 121 IVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFCPLFGPQLKN 180
IVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFCPLFGPQLKN
Sbjct: 121 IVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFCPLFGPQLKN 180
Query: 181 ETSWYLRHHWP 191
ETSWYLRHHWP
Sbjct: 181 ETSWYLRHHWP 191
>gi|4502319 ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1
[Homo sapiens]
Length = 81
Score = 136 bits (343), Expect = 1e-32
Identities = 60/80 (75%), Positives = 68/80 (85%)
Query: 112 AYHSLMVLLIVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFC 171
AYH L V LIV+S+FWGF+ FLVPWFIPK +R VIIT+LVTCSVCCYLFWL+AIL
Sbjct: 2 AYHGLTVPLIVMSVFWGFVGFLVPWFIPKGPNRGVIITMLVTCSVCCYLFWLIAILAQLN 61
Query: 172 PLFGPQLKNETSWYLRHHWP 191
PLFGPQLKNET WYL++HWP
Sbjct: 62 PLFGPQLKNETIWYLKYHWP 81
>gi|154689666 ATPase, H+ transporting, V0 subunit isoform 1 [Homo
sapiens]
Length = 130
Score = 102 bits (255), Expect = 2e-22
Identities = 44/77 (57%), Positives = 55/77 (71%)
Query: 114 HSLMVLLIVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFCPL 173
HS + +I+ + FWG + PWF+PK +R VIIT+LV +VCCYLFWL+AIL PL
Sbjct: 53 HSFALPVIIFTTFWGLVGIAGPWFVPKGPNRGVIITMLVATAVCCYLFWLIAILAQLNPL 112
Query: 174 FGPQLKNETSWYLRHHW 190
FGPQLKNET WY+R W
Sbjct: 113 FGPQLKNETIWYVRFLW 129
>gi|154689796 ATPase, H+ transporting, V0 subunit isoform 2 [Homo
sapiens]
Length = 213
Score = 57.0 bits (136), Expect = 1e-08
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 9/62 (14%)
Query: 114 HSLMVLLIVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFCPL 173
HS + +I+ + FWG + PWF+PK +R VIIT+LV +VCCYL CP
Sbjct: 53 HSFALPVIIFTTFWGLVGIAGPWFVPKGPNRGVIITMLVATAVCCYL---------LCPA 103
Query: 174 FG 175
G
Sbjct: 104 LG 105
>gi|116235482 glycosyltransferase-like 1B [Homo sapiens]
Length = 721
Score = 32.3 bits (72), Expect = 0.25
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 124 SMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFCPLFGPQLKNETS 183
S +G + ++P +P L+RV+++ VT + W + F G ++N++
Sbjct: 176 SGLYGLMKLVLPSALPAELARVIVLDTDVTFASDISELWALFAHFSDTQAIG-LVENQSD 234
Query: 184 WYLRHHW 190
WYL + W
Sbjct: 235 WYLGNLW 241
>gi|239752668 PREDICTED: hypothetical protein [Homo sapiens]
Length = 131
Score = 31.6 bits (70), Expect = 0.43
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 120 LIVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILF 168
LIV+S GFL+ PW KS+ ++ L++C C + +L ILF
Sbjct: 76 LIVVSKRVGFLTSHRPWLEVKSMFKLAGNKRLLSCMARCAIRFLCVILF 124
>gi|239741010 PREDICTED: hypothetical protein XP_002342053 [Homo
sapiens]
Length = 131
Score = 31.6 bits (70), Expect = 0.43
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 120 LIVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILF 168
LIV+S GFL+ PW KS+ ++ L++C C + +L ILF
Sbjct: 76 LIVVSKRVGFLTSHRPWLEVKSMFKLAGNKRLLSCMARCAIRFLCVILF 124
>gi|19924141 like-glycosyltransferase [Homo sapiens]
Length = 756
Score = 30.4 bits (67), Expect = 0.97
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 124 SMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFCPLFGPQLKNETS 183
S +G + ++ +P +L RV+++ +T + W V F + G ++N++
Sbjct: 217 SGIYGLMKLVLTKTLPANLERVIVLDTDITFATDIAELWAVFHKFKGQQVLG-LVENQSD 275
Query: 184 WYLRHHW 190
WYL + W
Sbjct: 276 WYLGNLW 282
>gi|4758664 like-glycosyltransferase [Homo sapiens]
Length = 756
Score = 30.4 bits (67), Expect = 0.97
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 124 SMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFCPLFGPQLKNETS 183
S +G + ++ +P +L RV+++ +T + W V F + G ++N++
Sbjct: 217 SGIYGLMKLVLTKTLPANLERVIVLDTDITFATDIAELWAVFHKFKGQQVLG-LVENQSD 275
Query: 184 WYLRHHW 190
WYL + W
Sbjct: 276 WYLGNLW 282
>gi|106067657 luteinizing hormone/choriogonadotropin receptor
precursor [Homo sapiens]
Length = 699
Score = 29.6 bits (65), Expect = 1.7
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 99 RIKSSGLLQWQSWAYHSLMVLLIVISMF-WGFLSFLVPWFIPKSLSRVVIITILVTCSVC 157
R++ + L+ W + SL+ +L ++ + + +S P + +LS+V I+TIL+ V
Sbjct: 479 RLRHAILIMLGGWLFSSLIAMLPLVGVSNYMKVSICFPMDVETTLSQVYILTILILNVVA 538
Query: 158 CYLFWLVAILFHF 170
++ I +F
Sbjct: 539 FFIICACYIKIYF 551
>gi|52353274 olfactory receptor, family 6, subfamily X, member 1
[Homo sapiens]
Length = 312
Score = 29.3 bits (64), Expect = 2.2
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 12/79 (15%)
Query: 96 YSFRIKSSGLLQWQSWAYHSLMVLLIVISMFWGFLSFLVPWF----IPKSLSRVVIITIL 151
Y + +GL+ WA L + + F LSFL W+ IPK L V+ +
Sbjct: 33 YILTLAGNGLIIATVWAEPRLQIPMY---FFLCNLSFLEIWYTTTVIPKLLGTFVVARTV 89
Query: 152 VTCSVCCYLFWLVAILFHF 170
+ C CC L+ FHF
Sbjct: 90 I-CMSCC----LLQAFFHF 103
>gi|224994205 wolframin [Homo sapiens]
Length = 890
Score = 28.5 bits (62), Expect = 3.7
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 116 LMVLLIVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWL 163
L+ LL + + W +L L FI + +V++ + V C + YL +L
Sbjct: 467 LLSLLPSMPLNWPYLKVLGQTFITVPVGHLVVLNVSVPCLLYVYLLYL 514
>gi|224994203 wolframin [Homo sapiens]
Length = 890
Score = 28.5 bits (62), Expect = 3.7
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 116 LMVLLIVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWL 163
L+ LL + + W +L L FI + +V++ + V C + YL +L
Sbjct: 467 LLSLLPSMPLNWPYLKVLGQTFITVPVGHLVVLNVSVPCLLYVYLLYL 514
>gi|210032112 hydroxysteroid (17-beta) dehydrogenase 13 isoform B
[Homo sapiens]
Length = 264
Score = 28.5 bits (62), Expect = 3.7
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 116 LMVLLIVISMFWGFLSFLVPWFIPKSLSRVVIITILVT 153
L +LL++I++ + +L LV +FIP+ V +L+T
Sbjct: 5 LEILLLLITIIYSYLESLVKFFIPQRRKSVAGEIVLIT 42
>gi|210032110 hydroxysteroid (17-beta) dehydrogenase 13 isoform A
[Homo sapiens]
Length = 300
Score = 28.5 bits (62), Expect = 3.7
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 116 LMVLLIVISMFWGFLSFLVPWFIPKSLSRVVIITILVT 153
L +LL++I++ + +L LV +FIP+ V +L+T
Sbjct: 5 LEILLLLITIIYSYLESLVKFFIPQRRKSVAGEIVLIT 42
>gi|4559408 colony stimulating factor 2 receptor, beta precursor
[Homo sapiens]
Length = 897
Score = 28.1 bits (61), Expect = 4.8
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 58 PFQQLPTLNDWLANLFCFVADDMDAERVLSI 88
P Q L ND+ +++ C AD DA+R++++
Sbjct: 29 PLQTLRCYNDYTSHITCRWADTQDAQRLVNV 59
>gi|239755300 PREDICTED: similar to centaurin, gamma-like family,
member 1 [Homo sapiens]
Length = 284
Score = 27.7 bits (60), Expect = 6.3
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 79 DMDAERVLSIPSHQDSLYSFRIKSSGLLQW 108
D DA+R LSIP Q ++ R++S L W
Sbjct: 93 DRDADRSLSIPDEQLHSFASRVRSLELDDW 122
>gi|148743791 solute carrier family 17 (sodium phosphate), member 3
isoform a [Homo sapiens]
Length = 498
Score = 27.7 bits (60), Expect = 6.3
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 62 LPTLNDWLANLFCFVADDMDAERVLSIPSHQDSLYSFRIKSSGLLQWQSWAYHSLMVLLI 121
L +L W L CF + + V+ IP++ S+Y I+ +GLL + ++
Sbjct: 291 LRSLPIWSICLGCFSHQWLVSTMVVYIPTYISSVYHVNIRDNGLLSALPF------IVAW 344
Query: 122 VISMFWGFLS 131
VI M G+L+
Sbjct: 345 VIGMVGGYLA 354
>gi|148728191 solute carrier family 17 (sodium phosphate), member 3
isoform b [Homo sapiens]
Length = 420
Score = 27.7 bits (60), Expect = 6.3
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 62 LPTLNDWLANLFCFVADDMDAERVLSIPSHQDSLYSFRIKSSGLLQWQSWAYHSLMVLLI 121
L +L W L CF + + V+ IP++ S+Y I+ +GLL + ++
Sbjct: 213 LRSLPIWSICLGCFSHQWLVSTMVVYIPTYISSVYHVNIRDNGLLSALPF------IVAW 266
Query: 122 VISMFWGFLS 131
VI M G+L+
Sbjct: 267 VIGMVGGYLA 276
>gi|52317150 olfactory receptor, family 51, subfamily D, member 1
[Homo sapiens]
Length = 324
Score = 27.7 bits (60), Expect = 6.3
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 114 HSLMVLLIVI---SMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHF 170
+ L ++L V+ S+F GF L+ W + + SR + TC + L A+L +
Sbjct: 211 YGLFIILSVMGVDSLFIGFSYILILWAVLELSSRRAALKAFNTC-----ISHLCAVLVFY 265
Query: 171 CPLFG 175
PL G
Sbjct: 266 VPLIG 270
>gi|4504503 hydroxysteroid (17-beta) dehydrogenase 2 [Homo sapiens]
Length = 387
Score = 27.3 bits (59), Expect = 8.2
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 101 KSSGLL-QWQSWAYHSLMVLLIVISMFWGFLSFLVPWFI 138
KSSG L W V L+++S FWG + F V F+
Sbjct: 29 KSSGQLWSWMVCLAGLCAVCLLILSPFWGLILFSVSCFL 67
>gi|4507241 structure specific recognition protein 1 [Homo sapiens]
Length = 709
Score = 27.3 bits (59), Expect = 8.2
Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 13/63 (20%)
Query: 4 SSFLDSHKASGLLDSGAFSCVRSWNWHVKQSENKKHWSGTKFADQVMNILMCDHPFQQLP 63
S F +H L++ CV+ WNW KF Q+++ + D P ++P
Sbjct: 86 SDFFKTHYRLELMEKDL--CVKGWNWGT-----------VKFGGQLLSFDIGDQPVFEIP 132
Query: 64 TLN 66
N
Sbjct: 133 LSN 135
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.329 0.138 0.488
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,292,709
Number of Sequences: 37866
Number of extensions: 284049
Number of successful extensions: 836
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 817
Number of HSP's gapped (non-prelim): 28
length of query: 191
length of database: 18,247,518
effective HSP length: 96
effective length of query: 95
effective length of database: 14,612,382
effective search space: 1388176290
effective search space used: 1388176290
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.