Guide to the Human Genome
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Search of human proteins with 239746421

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239746421 PREDICTED: hypothetical protein XP_002344209
isoform 2 [Homo sapiens]
         (152 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757423 PREDICTED: hypothetical protein XP_002345427 isofor...   322   1e-88
gi|239757421 PREDICTED: hypothetical protein XP_002345428 isofor...   322   1e-88
gi|239751940 PREDICTED: hypothetical protein XP_002348044 isofor...   322   1e-88
gi|239751938 PREDICTED: hypothetical protein XP_002348045 isofor...   322   1e-88
gi|239746423 PREDICTED: hypothetical protein XP_002344208 isofor...   322   1e-88
gi|239746421 PREDICTED: hypothetical protein XP_002344209 isofor...   322   1e-88
gi|5031829 kallikrein 2, prostatic isoform 1 [Homo sapiens]            30   1.0  
gi|50363237 kallikrein 2, prostatic isoform 2 [Homo sapiens]           30   1.0  
gi|32455271 protein-O-mannosyltransferase 2 [Homo sapiens]             29   1.4  
gi|197927452 dynein, axonemal, heavy chain 1 [Homo sapiens]            29   1.4  
gi|61966731 transmembrane protein 82 [Homo sapiens]                    29   1.4  
gi|32698704 tectonin beta-propeller repeat containing 1 [Homo sa...    28   3.0  
gi|211904140 DAZ associated protein 2 isoform c [Homo sapiens]         28   3.0  
gi|9966903 mannosidase, alpha, class 1C, member 1 [Homo sapiens]       28   3.0  
gi|4557669 interleukin 4 receptor alpha chain isoform a precurso...    28   3.9  
gi|157074214 potassium channel, subfamily U, member 1 [Homo sapi...    28   3.9  
gi|13128976 Yip1 domain family, member 2 [Homo sapiens]                27   5.1  
gi|222080107 solute carrier family 23 (nucleobase transporters),...    27   6.7  
gi|222080105 solute carrier family 23 (nucleobase transporters),...    27   6.7  
gi|158635944 solute carrier family 23 (nucleobase transporters),...    27   6.7  
gi|239753530 PREDICTED: hypothetical protein [Homo sapiens]            27   6.7  
gi|239742029 PREDICTED: hypothetical protein XP_002342375 [Homo ...    27   6.7  
gi|4507033 solute carrier family 5 (sodium/glucose cotransporter...    27   8.8  

>gi|239757423 PREDICTED: hypothetical protein XP_002345427 isoform 1
           [Homo sapiens]
          Length = 195

 Score =  322 bits (824), Expect = 1e-88
 Identities = 152/152 (100%), Positives = 152/152 (100%)

Query: 1   MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR 60
           MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR
Sbjct: 44  MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR 103

Query: 61  LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF 120
           LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF
Sbjct: 104 LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF 163

Query: 121 TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ 152
           TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ
Sbjct: 164 TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ 195


>gi|239757421 PREDICTED: hypothetical protein XP_002345428 isoform 2
           [Homo sapiens]
          Length = 152

 Score =  322 bits (824), Expect = 1e-88
 Identities = 152/152 (100%), Positives = 152/152 (100%)

Query: 1   MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR 60
           MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR
Sbjct: 1   MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR 60

Query: 61  LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF 120
           LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF
Sbjct: 61  LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF 120

Query: 121 TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ 152
           TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ
Sbjct: 121 TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ 152


>gi|239751940 PREDICTED: hypothetical protein XP_002348044 isoform 1
           [Homo sapiens]
          Length = 195

 Score =  322 bits (824), Expect = 1e-88
 Identities = 152/152 (100%), Positives = 152/152 (100%)

Query: 1   MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR 60
           MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR
Sbjct: 44  MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR 103

Query: 61  LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF 120
           LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF
Sbjct: 104 LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF 163

Query: 121 TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ 152
           TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ
Sbjct: 164 TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ 195


>gi|239751938 PREDICTED: hypothetical protein XP_002348045 isoform 2
           [Homo sapiens]
          Length = 152

 Score =  322 bits (824), Expect = 1e-88
 Identities = 152/152 (100%), Positives = 152/152 (100%)

Query: 1   MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR 60
           MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR
Sbjct: 1   MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR 60

Query: 61  LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF 120
           LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF
Sbjct: 61  LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF 120

Query: 121 TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ 152
           TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ
Sbjct: 121 TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ 152


>gi|239746423 PREDICTED: hypothetical protein XP_002344208 isoform 1
           [Homo sapiens]
          Length = 195

 Score =  322 bits (824), Expect = 1e-88
 Identities = 152/152 (100%), Positives = 152/152 (100%)

Query: 1   MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR 60
           MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR
Sbjct: 44  MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR 103

Query: 61  LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF 120
           LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF
Sbjct: 104 LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF 163

Query: 121 TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ 152
           TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ
Sbjct: 164 TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ 195


>gi|239746421 PREDICTED: hypothetical protein XP_002344209 isoform 2
           [Homo sapiens]
          Length = 152

 Score =  322 bits (824), Expect = 1e-88
 Identities = 152/152 (100%), Positives = 152/152 (100%)

Query: 1   MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR 60
           MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR
Sbjct: 1   MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR 60

Query: 61  LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF 120
           LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF
Sbjct: 61  LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF 120

Query: 121 TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ 152
           TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ
Sbjct: 121 TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ 152


>gi|5031829 kallikrein 2, prostatic isoform 1 [Homo sapiens]
          Length = 261

 Score = 29.6 bits (65), Expect = 1.0
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 5  PRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWI 46
          P +++  +G  E  + + PW   V  HGW       + P W+
Sbjct: 19 PLIQSRIVGGWECEKHSQPWQVAVYSHGWAHCGGVLVHPQWV 60


>gi|50363237 kallikrein 2, prostatic isoform 2 [Homo sapiens]
          Length = 223

 Score = 29.6 bits (65), Expect = 1.0
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 5  PRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWI 46
          P +++  +G  E  + + PW   V  HGW       + P W+
Sbjct: 19 PLIQSRIVGGWECEKHSQPWQVAVYSHGWAHCGGVLVHPQWV 60


>gi|32455271 protein-O-mannosyltransferase 2 [Homo sapiens]
          Length = 750

 Score = 29.3 bits (64), Expect = 1.4
 Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 15/101 (14%)

Query: 48  WWSTSNWRQPLQRLLWGLEGILYLLLALMLCHALFTTGS--HLLSSLWPVVAAVWRHLLP 105
           WW    W       L G  G+ ++ L ++L   L T     +L   L   +  V +HL  
Sbjct: 225 WWF---WLSLTGVSLAGALGVKFVGLFIILQVGLNTIADLWYLFGDLSLSLVTVGKHLTA 281

Query: 106 ALLLLVLSALPALLFTASFLLLFSTLLSLVGLLTSMTHPGD 146
            +L L++  LP  L+TA+F + F  L        S + PGD
Sbjct: 282 RVLCLIV--LPLALYTATFAVHFMVL--------SKSGPGD 312


>gi|197927452 dynein, axonemal, heavy chain 1 [Homo sapiens]
          Length = 4265

 Score = 29.3 bits (64), Expect = 1.4
 Identities = 11/36 (30%), Positives = 20/36 (55%)

Query: 11   TIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWI 46
            ++G G+GP+      + + R  WV +   H+ PSW+
Sbjct: 3704 SLGQGQGPRAEAMMRSSIERGKWVFFQNCHLAPSWM 3739


>gi|61966731 transmembrane protein 82 [Homo sapiens]
          Length = 343

 Score = 29.3 bits (64), Expect = 1.4
 Identities = 31/103 (30%), Positives = 40/103 (38%), Gaps = 11/103 (10%)

Query: 43  PSWIQWWSTSNWRQPL-QRLLWGLEGILYLLLALMLCHALFTTG----------SHLLSS 91
           PSW+    +  W   L   LL GL G L +L+   L    F  G             L +
Sbjct: 8   PSWLPGLPSLEWGSSLLDSLLQGLIGALGVLVLNSLLKVYFFVGCANDPQRRPEKERLRA 67

Query: 92  LWPVVAAVWRHLLPALLLLVLSALPALLFTASFLLLFSTLLSL 134
            W  +  V    L   L +V S + AL+     L   STLLSL
Sbjct: 68  QWASLETVHLAGLALFLTVVGSRVAALVVLEFSLRAVSTLLSL 110


>gi|32698704 tectonin beta-propeller repeat containing 1 [Homo
           sapiens]
          Length = 1165

 Score = 28.1 bits (61), Expect = 3.0
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)

Query: 19  QQAVPWSAWVTRHGWVRWWVSHMPPSWI 46
           +QAV  S WV + G ++WW    P  W+
Sbjct: 601 EQAVEQSVWV-KTGALQWWCDWKPHKWV 627


>gi|211904140 DAZ associated protein 2 isoform c [Homo sapiens]
          Length = 207

 Score = 28.1 bits (61), Expect = 3.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)

Query: 31  HGWVRWWVSHM 41
           HGW RWW+ H+
Sbjct: 132 HGWFRWWLHHL 142


>gi|9966903 mannosidase, alpha, class 1C, member 1 [Homo sapiens]
          Length = 630

 Score = 28.1 bits (61), Expect = 3.0
 Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 95  VVAAVWRHLLPA--LLLLVLSALPALLFTASFLLLFSTLLSLVGLLTSMTHPG 145
           V A+ W   LP   L LL LS L  L F A FLL  S+ L  + L      PG
Sbjct: 10  VPASPWGLRLPQKFLFLLFLSGLVTLCFGALFLLPHSSRLKRLFLAPRTQQPG 62


>gi|4557669 interleukin 4 receptor alpha chain isoform a precursor
           [Homo sapiens]
          Length = 825

 Score = 27.7 bits (60), Expect = 3.9
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 6/56 (10%)

Query: 34  VRWWVSHMPPSWIQWWSTSNW----RQPL-QRLLWGLEGILYLLLAL-MLCHALFT 83
           VR W      +W +W  ++ W    R+P  Q LL G+     ++LA+ +LC+   T
Sbjct: 201 VRAWAQCYNTTWSEWSPSTKWHNSYREPFEQHLLLGVSVSCIVILAVCLLCYVSIT 256


>gi|157074214 potassium channel, subfamily U, member 1 [Homo
           sapiens]
          Length = 1149

 Score = 27.7 bits (60), Expect = 3.9
 Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 3/106 (2%)

Query: 41  MPPSWIQWWSTSNWRQPLQRLLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVW 100
           +PP++I ++  SNW     R L  L  +L L   L +  A+ T+ S   S L  ++ + W
Sbjct: 179 IPPTFISYYLKSNWLG--LRFLRALR-LLELPQILQILRAIKTSNSVKFSKLLSIILSTW 235

Query: 101 RHLLPALLLLVLSALPALLFTASFLLLFSTLLSLVGLLTSMTHPGD 146
                 + L+  S  P L    S  + +   + LV   TS    GD
Sbjct: 236 FTAAGFIHLVENSGDPWLKGRNSQNISYFESIYLVMATTSTVGFGD 281


>gi|13128976 Yip1 domain family, member 2 [Homo sapiens]
          Length = 316

 Score = 27.3 bits (59), Expect = 5.1
 Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 12/78 (15%)

Query: 54  WRQPLQRLLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLS 113
           W  P+  L W     L+  LAL L      + + L+ +LWPVV    R L+  +LL V+ 
Sbjct: 220 WLIPVPWLQW-----LFGALALGL------SAAGLVFTLWPVVREDTR-LVATVLLSVVV 267

Query: 114 ALPALLFTASFLLLFSTL 131
            L ALL     L  F +L
Sbjct: 268 LLHALLAMGCKLYFFQSL 285


>gi|222080107 solute carrier family 23 (nucleobase transporters),
          member 3 isoform 3 [Homo sapiens]
          Length = 618

 Score = 26.9 bits (58), Expect = 6.7
 Identities = 19/54 (35%), Positives = 25/54 (46%)

Query: 41 MPPSWIQWWSTSNWRQPLQRLLWGLEGILYLLLALMLCHALFTTGSHLLSSLWP 94
          +PP   Q  ST +W      L WGL  +L L   L++   L  +   LL SL P
Sbjct: 23 LPPPAPQNPSTHSWDPLCGSLPWGLSCLLALQHVLVMASLLCVSHLLLLCSLSP 76


>gi|222080105 solute carrier family 23 (nucleobase transporters),
          member 3 isoform 2 [Homo sapiens]
          Length = 610

 Score = 26.9 bits (58), Expect = 6.7
 Identities = 19/54 (35%), Positives = 25/54 (46%)

Query: 41 MPPSWIQWWSTSNWRQPLQRLLWGLEGILYLLLALMLCHALFTTGSHLLSSLWP 94
          +PP   Q  ST +W      L WGL  +L L   L++   L  +   LL SL P
Sbjct: 23 LPPPAPQNPSTHSWDPLCGSLPWGLSCLLALQHVLVMASLLCVSHLLLLCSLSP 76


>gi|158635944 solute carrier family 23 (nucleobase transporters),
          member 3 isoform 1 [Homo sapiens]
          Length = 493

 Score = 26.9 bits (58), Expect = 6.7
 Identities = 19/54 (35%), Positives = 25/54 (46%)

Query: 41 MPPSWIQWWSTSNWRQPLQRLLWGLEGILYLLLALMLCHALFTTGSHLLSSLWP 94
          +PP   Q  ST +W      L WGL  +L L   L++   L  +   LL SL P
Sbjct: 23 LPPPAPQNPSTHSWDPLCGSLPWGLSCLLALQHVLVMASLLCVSHLLLLCSLSP 76


>gi|239753530 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 340

 Score = 26.9 bits (58), Expect = 6.7
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 8/64 (12%)

Query: 37  WVSHMPPSWIQWWSTSNWRQPLQRLLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVV 96
           W+   P + +  +  S  RQ  +R+   ++G          C    TTGS+  + LWP  
Sbjct: 236 WLETAPATMVSSFQASPIRQAEERVHLSVQGTS--------CRMHPTTGSYSTTELWPRA 287

Query: 97  AAVW 100
            A++
Sbjct: 288 KAIF 291


>gi|239742029 PREDICTED: hypothetical protein XP_002342375 [Homo
           sapiens]
          Length = 340

 Score = 26.9 bits (58), Expect = 6.7
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 8/64 (12%)

Query: 37  WVSHMPPSWIQWWSTSNWRQPLQRLLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVV 96
           W+   P + +  +  S  RQ  +R+   ++G          C    TTGS+  + LWP  
Sbjct: 236 WLETAPATMVSSFQASPIRQAEERVHLSVQGTS--------CRMHPTTGSYSTTELWPRA 287

Query: 97  AAVW 100
            A++
Sbjct: 288 KAIF 291


>gi|4507033 solute carrier family 5 (sodium/glucose cotransporter),
           member 2 [Homo sapiens]
          Length = 672

 Score = 26.6 bits (57), Expect = 8.8
 Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 3/94 (3%)

Query: 59  QRLLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPAL 118
           Q   WGL G L + LA ++    F +GS +  S  P       +L  A++L   S L  L
Sbjct: 483 QGAFWGLIGGLLMGLARLIPEFSFGSGSCVQPSACPAFLCGVHYLYFAIVLFFCSGL--L 540

Query: 119 LFTASFLLLFSTLLSLVGLLTSMTH-PGDTQDLD 151
             T S          L  L+ S+ H   + +DLD
Sbjct: 541 TLTVSLCTAPIPRKHLHRLVFSLRHSKEEREDLD 574


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.136    0.480 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,532,247
Number of Sequences: 37866
Number of extensions: 274736
Number of successful extensions: 976
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 962
Number of HSP's gapped (non-prelim): 24
length of query: 152
length of database: 18,247,518
effective HSP length: 93
effective length of query: 59
effective length of database: 14,725,980
effective search space: 868832820
effective search space used: 868832820
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 57 (26.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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