BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239746421 PREDICTED: hypothetical protein XP_002344209 isoform 2 [Homo sapiens] (152 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239757423 PREDICTED: hypothetical protein XP_002345427 isofor... 322 1e-88 gi|239757421 PREDICTED: hypothetical protein XP_002345428 isofor... 322 1e-88 gi|239751940 PREDICTED: hypothetical protein XP_002348044 isofor... 322 1e-88 gi|239751938 PREDICTED: hypothetical protein XP_002348045 isofor... 322 1e-88 gi|239746423 PREDICTED: hypothetical protein XP_002344208 isofor... 322 1e-88 gi|239746421 PREDICTED: hypothetical protein XP_002344209 isofor... 322 1e-88 gi|5031829 kallikrein 2, prostatic isoform 1 [Homo sapiens] 30 1.0 gi|50363237 kallikrein 2, prostatic isoform 2 [Homo sapiens] 30 1.0 gi|32455271 protein-O-mannosyltransferase 2 [Homo sapiens] 29 1.4 gi|197927452 dynein, axonemal, heavy chain 1 [Homo sapiens] 29 1.4 gi|61966731 transmembrane protein 82 [Homo sapiens] 29 1.4 gi|32698704 tectonin beta-propeller repeat containing 1 [Homo sa... 28 3.0 gi|211904140 DAZ associated protein 2 isoform c [Homo sapiens] 28 3.0 gi|9966903 mannosidase, alpha, class 1C, member 1 [Homo sapiens] 28 3.0 gi|4557669 interleukin 4 receptor alpha chain isoform a precurso... 28 3.9 gi|157074214 potassium channel, subfamily U, member 1 [Homo sapi... 28 3.9 gi|13128976 Yip1 domain family, member 2 [Homo sapiens] 27 5.1 gi|222080107 solute carrier family 23 (nucleobase transporters),... 27 6.7 gi|222080105 solute carrier family 23 (nucleobase transporters),... 27 6.7 gi|158635944 solute carrier family 23 (nucleobase transporters),... 27 6.7 gi|239753530 PREDICTED: hypothetical protein [Homo sapiens] 27 6.7 gi|239742029 PREDICTED: hypothetical protein XP_002342375 [Homo ... 27 6.7 gi|4507033 solute carrier family 5 (sodium/glucose cotransporter... 27 8.8 >gi|239757423 PREDICTED: hypothetical protein XP_002345427 isoform 1 [Homo sapiens] Length = 195 Score = 322 bits (824), Expect = 1e-88 Identities = 152/152 (100%), Positives = 152/152 (100%) Query: 1 MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR 60 MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR Sbjct: 44 MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR 103 Query: 61 LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF 120 LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF Sbjct: 104 LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF 163 Query: 121 TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ 152 TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ Sbjct: 164 TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ 195 >gi|239757421 PREDICTED: hypothetical protein XP_002345428 isoform 2 [Homo sapiens] Length = 152 Score = 322 bits (824), Expect = 1e-88 Identities = 152/152 (100%), Positives = 152/152 (100%) Query: 1 MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR 60 MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR Sbjct: 1 MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR 60 Query: 61 LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF 120 LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF Sbjct: 61 LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF 120 Query: 121 TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ 152 TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ Sbjct: 121 TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ 152 >gi|239751940 PREDICTED: hypothetical protein XP_002348044 isoform 1 [Homo sapiens] Length = 195 Score = 322 bits (824), Expect = 1e-88 Identities = 152/152 (100%), Positives = 152/152 (100%) Query: 1 MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR 60 MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR Sbjct: 44 MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR 103 Query: 61 LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF 120 LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF Sbjct: 104 LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF 163 Query: 121 TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ 152 TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ Sbjct: 164 TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ 195 >gi|239751938 PREDICTED: hypothetical protein XP_002348045 isoform 2 [Homo sapiens] Length = 152 Score = 322 bits (824), Expect = 1e-88 Identities = 152/152 (100%), Positives = 152/152 (100%) Query: 1 MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR 60 MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR Sbjct: 1 MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR 60 Query: 61 LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF 120 LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF Sbjct: 61 LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF 120 Query: 121 TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ 152 TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ Sbjct: 121 TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ 152 >gi|239746423 PREDICTED: hypothetical protein XP_002344208 isoform 1 [Homo sapiens] Length = 195 Score = 322 bits (824), Expect = 1e-88 Identities = 152/152 (100%), Positives = 152/152 (100%) Query: 1 MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR 60 MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR Sbjct: 44 MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR 103 Query: 61 LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF 120 LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF Sbjct: 104 LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF 163 Query: 121 TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ 152 TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ Sbjct: 164 TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ 195 >gi|239746421 PREDICTED: hypothetical protein XP_002344209 isoform 2 [Homo sapiens] Length = 152 Score = 322 bits (824), Expect = 1e-88 Identities = 152/152 (100%), Positives = 152/152 (100%) Query: 1 MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR 60 MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR Sbjct: 1 MMQQPRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWIQWWSTSNWRQPLQR 60 Query: 61 LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF 120 LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF Sbjct: 61 LLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPALLF 120 Query: 121 TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ 152 TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ Sbjct: 121 TASFLLLFSTLLSLVGLLTSMTHPGDTQDLDQ 152 >gi|5031829 kallikrein 2, prostatic isoform 1 [Homo sapiens] Length = 261 Score = 29.6 bits (65), Expect = 1.0 Identities = 11/42 (26%), Positives = 19/42 (45%) Query: 5 PRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWI 46 P +++ +G E + + PW V HGW + P W+ Sbjct: 19 PLIQSRIVGGWECEKHSQPWQVAVYSHGWAHCGGVLVHPQWV 60 >gi|50363237 kallikrein 2, prostatic isoform 2 [Homo sapiens] Length = 223 Score = 29.6 bits (65), Expect = 1.0 Identities = 11/42 (26%), Positives = 19/42 (45%) Query: 5 PRVETDTIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWI 46 P +++ +G E + + PW V HGW + P W+ Sbjct: 19 PLIQSRIVGGWECEKHSQPWQVAVYSHGWAHCGGVLVHPQWV 60 >gi|32455271 protein-O-mannosyltransferase 2 [Homo sapiens] Length = 750 Score = 29.3 bits (64), Expect = 1.4 Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 15/101 (14%) Query: 48 WWSTSNWRQPLQRLLWGLEGILYLLLALMLCHALFTTGS--HLLSSLWPVVAAVWRHLLP 105 WW W L G G+ ++ L ++L L T +L L + V +HL Sbjct: 225 WWF---WLSLTGVSLAGALGVKFVGLFIILQVGLNTIADLWYLFGDLSLSLVTVGKHLTA 281 Query: 106 ALLLLVLSALPALLFTASFLLLFSTLLSLVGLLTSMTHPGD 146 +L L++ LP L+TA+F + F L S + PGD Sbjct: 282 RVLCLIV--LPLALYTATFAVHFMVL--------SKSGPGD 312 >gi|197927452 dynein, axonemal, heavy chain 1 [Homo sapiens] Length = 4265 Score = 29.3 bits (64), Expect = 1.4 Identities = 11/36 (30%), Positives = 20/36 (55%) Query: 11 TIGAGEGPQQAVPWSAWVTRHGWVRWWVSHMPPSWI 46 ++G G+GP+ + + R WV + H+ PSW+ Sbjct: 3704 SLGQGQGPRAEAMMRSSIERGKWVFFQNCHLAPSWM 3739 >gi|61966731 transmembrane protein 82 [Homo sapiens] Length = 343 Score = 29.3 bits (64), Expect = 1.4 Identities = 31/103 (30%), Positives = 40/103 (38%), Gaps = 11/103 (10%) Query: 43 PSWIQWWSTSNWRQPL-QRLLWGLEGILYLLLALMLCHALFTTG----------SHLLSS 91 PSW+ + W L LL GL G L +L+ L F G L + Sbjct: 8 PSWLPGLPSLEWGSSLLDSLLQGLIGALGVLVLNSLLKVYFFVGCANDPQRRPEKERLRA 67 Query: 92 LWPVVAAVWRHLLPALLLLVLSALPALLFTASFLLLFSTLLSL 134 W + V L L +V S + AL+ L STLLSL Sbjct: 68 QWASLETVHLAGLALFLTVVGSRVAALVVLEFSLRAVSTLLSL 110 >gi|32698704 tectonin beta-propeller repeat containing 1 [Homo sapiens] Length = 1165 Score = 28.1 bits (61), Expect = 3.0 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%) Query: 19 QQAVPWSAWVTRHGWVRWWVSHMPPSWI 46 +QAV S WV + G ++WW P W+ Sbjct: 601 EQAVEQSVWV-KTGALQWWCDWKPHKWV 627 >gi|211904140 DAZ associated protein 2 isoform c [Homo sapiens] Length = 207 Score = 28.1 bits (61), Expect = 3.0 Identities = 7/11 (63%), Positives = 9/11 (81%) Query: 31 HGWVRWWVSHM 41 HGW RWW+ H+ Sbjct: 132 HGWFRWWLHHL 142 >gi|9966903 mannosidase, alpha, class 1C, member 1 [Homo sapiens] Length = 630 Score = 28.1 bits (61), Expect = 3.0 Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Query: 95 VVAAVWRHLLPA--LLLLVLSALPALLFTASFLLLFSTLLSLVGLLTSMTHPG 145 V A+ W LP L LL LS L L F A FLL S+ L + L PG Sbjct: 10 VPASPWGLRLPQKFLFLLFLSGLVTLCFGALFLLPHSSRLKRLFLAPRTQQPG 62 >gi|4557669 interleukin 4 receptor alpha chain isoform a precursor [Homo sapiens] Length = 825 Score = 27.7 bits (60), Expect = 3.9 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 6/56 (10%) Query: 34 VRWWVSHMPPSWIQWWSTSNW----RQPL-QRLLWGLEGILYLLLAL-MLCHALFT 83 VR W +W +W ++ W R+P Q LL G+ ++LA+ +LC+ T Sbjct: 201 VRAWAQCYNTTWSEWSPSTKWHNSYREPFEQHLLLGVSVSCIVILAVCLLCYVSIT 256 >gi|157074214 potassium channel, subfamily U, member 1 [Homo sapiens] Length = 1149 Score = 27.7 bits (60), Expect = 3.9 Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 3/106 (2%) Query: 41 MPPSWIQWWSTSNWRQPLQRLLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVW 100 +PP++I ++ SNW R L L +L L L + A+ T+ S S L ++ + W Sbjct: 179 IPPTFISYYLKSNWLG--LRFLRALR-LLELPQILQILRAIKTSNSVKFSKLLSIILSTW 235 Query: 101 RHLLPALLLLVLSALPALLFTASFLLLFSTLLSLVGLLTSMTHPGD 146 + L+ S P L S + + + LV TS GD Sbjct: 236 FTAAGFIHLVENSGDPWLKGRNSQNISYFESIYLVMATTSTVGFGD 281 >gi|13128976 Yip1 domain family, member 2 [Homo sapiens] Length = 316 Score = 27.3 bits (59), Expect = 5.1 Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 12/78 (15%) Query: 54 WRQPLQRLLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLS 113 W P+ L W L+ LAL L + + L+ +LWPVV R L+ +LL V+ Sbjct: 220 WLIPVPWLQW-----LFGALALGL------SAAGLVFTLWPVVREDTR-LVATVLLSVVV 267 Query: 114 ALPALLFTASFLLLFSTL 131 L ALL L F +L Sbjct: 268 LLHALLAMGCKLYFFQSL 285 >gi|222080107 solute carrier family 23 (nucleobase transporters), member 3 isoform 3 [Homo sapiens] Length = 618 Score = 26.9 bits (58), Expect = 6.7 Identities = 19/54 (35%), Positives = 25/54 (46%) Query: 41 MPPSWIQWWSTSNWRQPLQRLLWGLEGILYLLLALMLCHALFTTGSHLLSSLWP 94 +PP Q ST +W L WGL +L L L++ L + LL SL P Sbjct: 23 LPPPAPQNPSTHSWDPLCGSLPWGLSCLLALQHVLVMASLLCVSHLLLLCSLSP 76 >gi|222080105 solute carrier family 23 (nucleobase transporters), member 3 isoform 2 [Homo sapiens] Length = 610 Score = 26.9 bits (58), Expect = 6.7 Identities = 19/54 (35%), Positives = 25/54 (46%) Query: 41 MPPSWIQWWSTSNWRQPLQRLLWGLEGILYLLLALMLCHALFTTGSHLLSSLWP 94 +PP Q ST +W L WGL +L L L++ L + LL SL P Sbjct: 23 LPPPAPQNPSTHSWDPLCGSLPWGLSCLLALQHVLVMASLLCVSHLLLLCSLSP 76 >gi|158635944 solute carrier family 23 (nucleobase transporters), member 3 isoform 1 [Homo sapiens] Length = 493 Score = 26.9 bits (58), Expect = 6.7 Identities = 19/54 (35%), Positives = 25/54 (46%) Query: 41 MPPSWIQWWSTSNWRQPLQRLLWGLEGILYLLLALMLCHALFTTGSHLLSSLWP 94 +PP Q ST +W L WGL +L L L++ L + LL SL P Sbjct: 23 LPPPAPQNPSTHSWDPLCGSLPWGLSCLLALQHVLVMASLLCVSHLLLLCSLSP 76 >gi|239753530 PREDICTED: hypothetical protein [Homo sapiens] Length = 340 Score = 26.9 bits (58), Expect = 6.7 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 8/64 (12%) Query: 37 WVSHMPPSWIQWWSTSNWRQPLQRLLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVV 96 W+ P + + + S RQ +R+ ++G C TTGS+ + LWP Sbjct: 236 WLETAPATMVSSFQASPIRQAEERVHLSVQGTS--------CRMHPTTGSYSTTELWPRA 287 Query: 97 AAVW 100 A++ Sbjct: 288 KAIF 291 >gi|239742029 PREDICTED: hypothetical protein XP_002342375 [Homo sapiens] Length = 340 Score = 26.9 bits (58), Expect = 6.7 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 8/64 (12%) Query: 37 WVSHMPPSWIQWWSTSNWRQPLQRLLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVV 96 W+ P + + + S RQ +R+ ++G C TTGS+ + LWP Sbjct: 236 WLETAPATMVSSFQASPIRQAEERVHLSVQGTS--------CRMHPTTGSYSTTELWPRA 287 Query: 97 AAVW 100 A++ Sbjct: 288 KAIF 291 >gi|4507033 solute carrier family 5 (sodium/glucose cotransporter), member 2 [Homo sapiens] Length = 672 Score = 26.6 bits (57), Expect = 8.8 Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 3/94 (3%) Query: 59 QRLLWGLEGILYLLLALMLCHALFTTGSHLLSSLWPVVAAVWRHLLPALLLLVLSALPAL 118 Q WGL G L + LA ++ F +GS + S P +L A++L S L L Sbjct: 483 QGAFWGLIGGLLMGLARLIPEFSFGSGSCVQPSACPAFLCGVHYLYFAIVLFFCSGL--L 540 Query: 119 LFTASFLLLFSTLLSLVGLLTSMTH-PGDTQDLD 151 T S L L+ S+ H + +DLD Sbjct: 541 TLTVSLCTAPIPRKHLHRLVFSLRHSKEEREDLD 574 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.325 0.136 0.480 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,532,247 Number of Sequences: 37866 Number of extensions: 274736 Number of successful extensions: 976 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 962 Number of HSP's gapped (non-prelim): 24 length of query: 152 length of database: 18,247,518 effective HSP length: 93 effective length of query: 59 effective length of database: 14,725,980 effective search space: 868832820 effective search space used: 868832820 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.