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Search of human proteins with 116256462
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|116256462 tetratricopeptide repeat domain 39C isoform 2
[Homo sapiens]
(522 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|209862743 tetratricopeptide repeat domain 39C isoform 1 [Homo... 1044 0.0
gi|116256462 tetratricopeptide repeat domain 39C isoform 2 [Homo... 1044 0.0
gi|22749191 tetratricopeptide repeat domain 39B [Homo sapiens] 181 1e-45
gi|122937436 tetratricopeptide repeat domain 39A isoform 2 [Homo... 161 1e-39
gi|221307588 tetratricopeptide repeat domain 39A isoform 1 [Homo... 161 1e-39
gi|148529023 hypothetical protein LOC23172 [Homo sapiens] 34 0.28
gi|217416374 hypothetical protein LOC92749 [Homo sapiens] 33 0.83
gi|218563749 ArfGAP with coiled-coil, ankyrin repeat and PH doma... 30 4.1
gi|210147462 von Willebrand factor A domain containing 5B1 [Homo... 30 4.1
gi|51477723 testis expressed sequence 11 isoform 2 [Homo sapiens] 30 5.4
gi|51477721 testis expressed sequence 11 isoform 1 [Homo sapiens] 30 5.4
gi|239755530 PREDICTED: similar to hCG2036644 [Homo sapiens] 30 5.4
gi|239750002 PREDICTED: hypothetical protein XP_002347250 [Homo ... 30 5.4
gi|239744313 PREDICTED: hypothetical protein XP_002343115 [Homo ... 30 5.4
gi|19424126 diamine N-acetyltransferase 2 [Homo sapiens] 30 5.4
gi|156119621 inhibitor of DNA binding 3 [Homo sapiens] 30 5.4
gi|120587023 down-regulated in metastasis [Homo sapiens] 29 9.2
gi|134244281 melanoma-associated antigen p97 isoform 1 precursor... 29 9.2
gi|89036565 PREDICTED: similar to Temporarily Assigned Gene name... 29 9.2
gi|118402578 anaphase-promoting complex, subunit 6 [Homo sapiens] 29 9.2
gi|118402580 anaphase-promoting complex, subunit 6 [Homo sapiens] 29 9.2
>gi|209862743 tetratricopeptide repeat domain 39C isoform 1 [Homo
sapiens]
Length = 583
Score = 1044 bits (2700), Expect = 0.0
Identities = 522/522 (100%), Positives = 522/522 (100%)
Query: 1 MSFGASFVSFLNAMMTFEEEKMQLACDDLKTTEKLCESEEAGVIETIKNKIKKNVDVRKS 60
MSFGASFVSFLNAMMTFEEEKMQLACDDLKTTEKLCESEEAGVIETIKNKIKKNVDVRKS
Sbjct: 62 MSFGASFVSFLNAMMTFEEEKMQLACDDLKTTEKLCESEEAGVIETIKNKIKKNVDVRKS 121
Query: 61 APSMVDRLQRQIIIADCQVYLAVLSFVKQELSAYIKGGWILRKAWKIYNKCYLDINALQE 120
APSMVDRLQRQIIIADCQVYLAVLSFVKQELSAYIKGGWILRKAWKIYNKCYLDINALQE
Sbjct: 122 APSMVDRLQRQIIIADCQVYLAVLSFVKQELSAYIKGGWILRKAWKIYNKCYLDINALQE 181
Query: 121 LYQKKLTEESLTSDAANDNHIVAEGVSEESLNRLKGAVSFGYGLFHLCISMVPPNLLKII 180
LYQKKLTEESLTSDAANDNHIVAEGVSEESLNRLKGAVSFGYGLFHLCISMVPPNLLKII
Sbjct: 182 LYQKKLTEESLTSDAANDNHIVAEGVSEESLNRLKGAVSFGYGLFHLCISMVPPNLLKII 241
Query: 181 NLLGFPGDRLQGLSSLMYASESKDMKAPLATLALLWYHTVVRPFFALDGSDNKAGLDEAK 240
NLLGFPGDRLQGLSSLMYASESKDMKAPLATLALLWYHTVVRPFFALDGSDNKAGLDEAK
Sbjct: 242 NLLGFPGDRLQGLSSLMYASESKDMKAPLATLALLWYHTVVRPFFALDGSDNKAGLDEAK 301
Query: 241 EILLKKEAAYPNSSLFMFFKGRIQRLECQINSALTSFHTALELAVDQREIQHVCLYEIGW 300
EILLKKEAAYPNSSLFMFFKGRIQRLECQINSALTSFHTALELAVDQREIQHVCLYEIGW
Sbjct: 302 EILLKKEAAYPNSSLFMFFKGRIQRLECQINSALTSFHTALELAVDQREIQHVCLYEIGW 361
Query: 301 CSMIELNFKDAFDSFERLKNESRWSQCYYAYLTAVCQGATGDVDGAQIVFKEVQKLFKRK 360
CSMIELNFKDAFDSFERLKNESRWSQCYYAYLTAVCQGATGDVDGAQIVFKEVQKLFKRK
Sbjct: 362 CSMIELNFKDAFDSFERLKNESRWSQCYYAYLTAVCQGATGDVDGAQIVFKEVQKLFKRK 421
Query: 361 NNQIEQFSVKKAERFRKQTPTKALCVLASIEVLYLWKALPNCSFPNLQRMSQACHEVDDS 420
NNQIEQFSVKKAERFRKQTPTKALCVLASIEVLYLWKALPNCSFPNLQRMSQACHEVDDS
Sbjct: 422 NNQIEQFSVKKAERFRKQTPTKALCVLASIEVLYLWKALPNCSFPNLQRMSQACHEVDDS 481
Query: 421 SVVGLKYLLLGAIHKCLGNSEDAVQYFQRAVKDELCRQNNLYVQPYACYELGCLLLDKPE 480
SVVGLKYLLLGAIHKCLGNSEDAVQYFQRAVKDELCRQNNLYVQPYACYELGCLLLDKPE
Sbjct: 482 SVVGLKYLLLGAIHKCLGNSEDAVQYFQRAVKDELCRQNNLYVQPYACYELGCLLLDKPE 541
Query: 481 TVGRGRALLLQAKEDFSGYDFENRLHVRIHAALASLRELVPQ 522
TVGRGRALLLQAKEDFSGYDFENRLHVRIHAALASLRELVPQ
Sbjct: 542 TVGRGRALLLQAKEDFSGYDFENRLHVRIHAALASLRELVPQ 583
>gi|116256462 tetratricopeptide repeat domain 39C isoform 2 [Homo
sapiens]
Length = 522
Score = 1044 bits (2700), Expect = 0.0
Identities = 522/522 (100%), Positives = 522/522 (100%)
Query: 1 MSFGASFVSFLNAMMTFEEEKMQLACDDLKTTEKLCESEEAGVIETIKNKIKKNVDVRKS 60
MSFGASFVSFLNAMMTFEEEKMQLACDDLKTTEKLCESEEAGVIETIKNKIKKNVDVRKS
Sbjct: 1 MSFGASFVSFLNAMMTFEEEKMQLACDDLKTTEKLCESEEAGVIETIKNKIKKNVDVRKS 60
Query: 61 APSMVDRLQRQIIIADCQVYLAVLSFVKQELSAYIKGGWILRKAWKIYNKCYLDINALQE 120
APSMVDRLQRQIIIADCQVYLAVLSFVKQELSAYIKGGWILRKAWKIYNKCYLDINALQE
Sbjct: 61 APSMVDRLQRQIIIADCQVYLAVLSFVKQELSAYIKGGWILRKAWKIYNKCYLDINALQE 120
Query: 121 LYQKKLTEESLTSDAANDNHIVAEGVSEESLNRLKGAVSFGYGLFHLCISMVPPNLLKII 180
LYQKKLTEESLTSDAANDNHIVAEGVSEESLNRLKGAVSFGYGLFHLCISMVPPNLLKII
Sbjct: 121 LYQKKLTEESLTSDAANDNHIVAEGVSEESLNRLKGAVSFGYGLFHLCISMVPPNLLKII 180
Query: 181 NLLGFPGDRLQGLSSLMYASESKDMKAPLATLALLWYHTVVRPFFALDGSDNKAGLDEAK 240
NLLGFPGDRLQGLSSLMYASESKDMKAPLATLALLWYHTVVRPFFALDGSDNKAGLDEAK
Sbjct: 181 NLLGFPGDRLQGLSSLMYASESKDMKAPLATLALLWYHTVVRPFFALDGSDNKAGLDEAK 240
Query: 241 EILLKKEAAYPNSSLFMFFKGRIQRLECQINSALTSFHTALELAVDQREIQHVCLYEIGW 300
EILLKKEAAYPNSSLFMFFKGRIQRLECQINSALTSFHTALELAVDQREIQHVCLYEIGW
Sbjct: 241 EILLKKEAAYPNSSLFMFFKGRIQRLECQINSALTSFHTALELAVDQREIQHVCLYEIGW 300
Query: 301 CSMIELNFKDAFDSFERLKNESRWSQCYYAYLTAVCQGATGDVDGAQIVFKEVQKLFKRK 360
CSMIELNFKDAFDSFERLKNESRWSQCYYAYLTAVCQGATGDVDGAQIVFKEVQKLFKRK
Sbjct: 301 CSMIELNFKDAFDSFERLKNESRWSQCYYAYLTAVCQGATGDVDGAQIVFKEVQKLFKRK 360
Query: 361 NNQIEQFSVKKAERFRKQTPTKALCVLASIEVLYLWKALPNCSFPNLQRMSQACHEVDDS 420
NNQIEQFSVKKAERFRKQTPTKALCVLASIEVLYLWKALPNCSFPNLQRMSQACHEVDDS
Sbjct: 361 NNQIEQFSVKKAERFRKQTPTKALCVLASIEVLYLWKALPNCSFPNLQRMSQACHEVDDS 420
Query: 421 SVVGLKYLLLGAIHKCLGNSEDAVQYFQRAVKDELCRQNNLYVQPYACYELGCLLLDKPE 480
SVVGLKYLLLGAIHKCLGNSEDAVQYFQRAVKDELCRQNNLYVQPYACYELGCLLLDKPE
Sbjct: 421 SVVGLKYLLLGAIHKCLGNSEDAVQYFQRAVKDELCRQNNLYVQPYACYELGCLLLDKPE 480
Query: 481 TVGRGRALLLQAKEDFSGYDFENRLHVRIHAALASLRELVPQ 522
TVGRGRALLLQAKEDFSGYDFENRLHVRIHAALASLRELVPQ
Sbjct: 481 TVGRGRALLLQAKEDFSGYDFENRLHVRIHAALASLRELVPQ 522
>gi|22749191 tetratricopeptide repeat domain 39B [Homo sapiens]
Length = 616
Score = 181 bits (460), Expect = 1e-45
Identities = 134/540 (24%), Positives = 248/540 (45%), Gaps = 63/540 (11%)
Query: 2 SFGASFVSFLNAMMTFEEEKMQLACDDLKTTEKLCES--EEAGVIETIKNKIKKNVDVRK 59
+ G S + L A++TFE++ +Q +K + C+ ++ V+E+ + + + +
Sbjct: 103 ALGYSTIVVLQAVLTFEQQDIQNGISAMKDALQTCQKYRKKYTVVESFSSLLSRGSLEQL 162
Query: 60 SAPSMVDRLQRQIIIADCQVYLAVLSFVKQE-LSAYIKGGWILRKAWKIYNKCYLDINAL 118
S M +I A+C + A L+FV+ E + +IKGG +R +++IY +C ++ L
Sbjct: 163 SEEEM----HAEICYAECLLQKAALTFVQDENMINFIKGGLKIRTSYQIYKEC---LSIL 215
Query: 119 QELYQKKLTEESLTSDAANDNHIVAEGVSEESLNRLKGAVSFGYGLFHLCISMVPPNLLK 178
E+ + KL +E +G V G G F+L +S++P +++
Sbjct: 216 HEIQKNKL--------------------QQEFFYEFEGGVKLGSGAFNLMLSLLPARIIR 255
Query: 179 IINLLGFPGDRLQGLSSLMYASESKDMKAPLATLALLWYHTVVRPFFALDGSDNKAGLDE 238
++ +GF G+R GL L + + M++ L L +L +HT + +L + + E
Sbjct: 256 LLEFIGFSGNRELGLLQLREGASGRSMRSALCCLTILAFHT----YISLILGTGEVNVAE 311
Query: 239 AKEILLKKEAAYPNSSLFMFFKGRIQRLECQINSALTSFHTALELAVDQREIQHVCLYEI 298
A+ +L +PN SL +F+ RI+ L+ + A F + + + ++ H+C +E+
Sbjct: 312 AERLLAPFLQQFPNGSLVLFYHARIELLKGNLEEAQEVFQKCVSVQEEWKQFHHLCYWEL 371
Query: 299 GWCSMIELNFKDAFDSFERLKNESRWSQCYYAYLTAVCQGATGDVD------GAQIVFKE 352
W ++ + N+ A+ + L ES+WS+ Y +L A + D +F++
Sbjct: 372 MWINVFQQNWMQAYYYSDLLCKESKWSKATYVFLKAAILSMLPEEDVVATNENVVTLFRQ 431
Query: 353 VQKLFKR---KNNQIEQFSVKKAERFRKQTPTKALCVLASIEVLYLWKALPNCSFPN--- 406
V L +R K+ E+F+V+KA R+ P +L ++E++Y+W S
Sbjct: 432 VDSLKQRIAGKSIPTEKFAVRKARRYSASLPAPVKLILPALEMMYVWNGFSIVSKRKDLS 491
Query: 407 -------------LQRMSQACHEVDDSSVVGLKYLLLGAIHKCLGNSEDAVQYFQRAVKD 453
LQ + VDD +V LL G K L A + V+
Sbjct: 492 ENLLVTVEKAEAALQSQNFNSFSVDDECLV---KLLKGCCLKNLQRPLQAELCYNHVVES 548
Query: 454 ELCRQNNLYVQPYACYELGCLLLDKPETVGRGRALLLQAKEDFSGYDFENRLHVRIHAAL 513
E + + Y+ P+ +EL L + E + + L A+ ++ Y E+RLH RI AAL
Sbjct: 549 EKLLKYDHYLVPFTLFELASLYKSQGE-IDKAIKFLETARNNYKDYSLESRLHFRIQAAL 607
>gi|122937436 tetratricopeptide repeat domain 39A isoform 2 [Homo
sapiens]
Length = 578
Score = 161 bits (408), Expect = 1e-39
Identities = 133/529 (25%), Positives = 244/529 (46%), Gaps = 65/529 (12%)
Query: 11 LNAMMTFEEEKMQLACDDLKTTEKLCESEEAGVIETIKNKIKKNVDVRKSAPSMVDRLQR 70
+ AMMTF+ + + LA + +K + LC+ ++ + V+ + +
Sbjct: 67 MQAMMTFDPQDILLAGNMMKEAQMLCQRHRRK--SSVTDSFSSLVNRPTLGQFTEEEIHA 124
Query: 71 QIIIADCQVYLAVLSFVKQE-LSAYIKGGWILRKAWKIYNKCYLDINALQELYQKKLTEE 129
++ A+C + A L+F++ E + ++IKGG +R +++ Y + LD Y K
Sbjct: 125 EVCYAECLLQRAALTFLQDENMVSFIKGGIKVRNSYQTYKE--LDSLVQSSQYCK----- 177
Query: 130 SLTSDAANDNHIVAEGVSEESLNRLKGAVSFGYGLFHLCISMVPPNLLKIINLLGFPGDR 189
+NH +G V G G F+L +SM+P +L+++ +GF G++
Sbjct: 178 -------GENH-----------PHFEGGVKLGVGAFNLTLSMLPTRILRLLEFVGFSGNK 219
Query: 190 LQGLSSLMYASESKDMKAPLATLALLWYHTVVRPFFALDGSDNKAGLDEAKEILLKKEAA 249
GL L + ++ L + LL YHT + F L G+ N ++EA+++L
Sbjct: 220 DYGLLQLEEGASGHSFRSVLCVMLLLCYHTFLT--FVL-GTGN-VNIEEAEKLLKPYLNR 275
Query: 250 YPNSSLFMFFKGRIQRLECQINSALTSFHTALELAVDQREIQHVCLYEIGWCSMIELNFK 309
YP ++F+FF GRI+ ++ I++A+ F E ++ H+C +E+ WC + +K
Sbjct: 276 YPKGAIFLFFAGRIEVIKGNIDAAIRRFEECCEAQQHWKQFHHMCYWELMWCFTYKGQWK 335
Query: 310 DAFDSFERLKNESRWSQCYYAYLTAVCQGATGDVDGAQIVFKEVQKLFKR---------- 359
++ + L E+ WS+ Y Y+ A G D EV+ LF+
Sbjct: 336 MSYFYADLLSKENCWSKATYIYMKAAYLSMFGKEDHKPFGDDEVE-LFRAVPGLKLKIAG 394
Query: 360 KNNQIEQFSVKKAERFRKQTPTKALCVLASIEVLYLWKAL------PNCSFPNLQRMSQA 413
K+ E+F+++K+ R+ P + ++E++Y+W P + L+ +++A
Sbjct: 395 KSLPTEKFAIRKSRRYFSSNPIS--LPVPALEMMYIWNGYAVIGKQPKLTDGILEIITKA 452
Query: 414 ----------CHEVDDSSVVGLKYLLLGAIHKCLGNSEDAVQYFQRAVKDELCRQNNLYV 463
+ VDD +V LL G K LG ++A + F+ +E + + Y+
Sbjct: 453 EEMLEKGPENEYSVDDECLV---KLLKGLCLKYLGRVQEAEENFRSISANEKKIKYDHYL 509
Query: 464 QPYACYELGCLLLDKPETVGRGRALLLQAKEDFSGYDFENRLHVRIHAA 512
P A EL LL+++ LL AK+++ Y E+R H RI AA
Sbjct: 510 IPNALLELALLLMEQDRN-EEAIKLLESAKQNYKNYSMESRTHFRIQAA 557
>gi|221307588 tetratricopeptide repeat domain 39A isoform 1 [Homo
sapiens]
Length = 581
Score = 161 bits (408), Expect = 1e-39
Identities = 133/529 (25%), Positives = 244/529 (46%), Gaps = 65/529 (12%)
Query: 11 LNAMMTFEEEKMQLACDDLKTTEKLCESEEAGVIETIKNKIKKNVDVRKSAPSMVDRLQR 70
+ AMMTF+ + + LA + +K + LC+ ++ + V+ + +
Sbjct: 70 MQAMMTFDPQDILLAGNMMKEAQMLCQRHRRK--SSVTDSFSSLVNRPTLGQFTEEEIHA 127
Query: 71 QIIIADCQVYLAVLSFVKQE-LSAYIKGGWILRKAWKIYNKCYLDINALQELYQKKLTEE 129
++ A+C + A L+F++ E + ++IKGG +R +++ Y + LD Y K
Sbjct: 128 EVCYAECLLQRAALTFLQDENMVSFIKGGIKVRNSYQTYKE--LDSLVQSSQYCK----- 180
Query: 130 SLTSDAANDNHIVAEGVSEESLNRLKGAVSFGYGLFHLCISMVPPNLLKIINLLGFPGDR 189
+NH +G V G G F+L +SM+P +L+++ +GF G++
Sbjct: 181 -------GENH-----------PHFEGGVKLGVGAFNLTLSMLPTRILRLLEFVGFSGNK 222
Query: 190 LQGLSSLMYASESKDMKAPLATLALLWYHTVVRPFFALDGSDNKAGLDEAKEILLKKEAA 249
GL L + ++ L + LL YHT + F L G+ N ++EA+++L
Sbjct: 223 DYGLLQLEEGASGHSFRSVLCVMLLLCYHTFLT--FVL-GTGN-VNIEEAEKLLKPYLNR 278
Query: 250 YPNSSLFMFFKGRIQRLECQINSALTSFHTALELAVDQREIQHVCLYEIGWCSMIELNFK 309
YP ++F+FF GRI+ ++ I++A+ F E ++ H+C +E+ WC + +K
Sbjct: 279 YPKGAIFLFFAGRIEVIKGNIDAAIRRFEECCEAQQHWKQFHHMCYWELMWCFTYKGQWK 338
Query: 310 DAFDSFERLKNESRWSQCYYAYLTAVCQGATGDVDGAQIVFKEVQKLFKR---------- 359
++ + L E+ WS+ Y Y+ A G D EV+ LF+
Sbjct: 339 MSYFYADLLSKENCWSKATYIYMKAAYLSMFGKEDHKPFGDDEVE-LFRAVPGLKLKIAG 397
Query: 360 KNNQIEQFSVKKAERFRKQTPTKALCVLASIEVLYLWKAL------PNCSFPNLQRMSQA 413
K+ E+F+++K+ R+ P + ++E++Y+W P + L+ +++A
Sbjct: 398 KSLPTEKFAIRKSRRYFSSNPIS--LPVPALEMMYIWNGYAVIGKQPKLTDGILEIITKA 455
Query: 414 ----------CHEVDDSSVVGLKYLLLGAIHKCLGNSEDAVQYFQRAVKDELCRQNNLYV 463
+ VDD +V LL G K LG ++A + F+ +E + + Y+
Sbjct: 456 EEMLEKGPENEYSVDDECLV---KLLKGLCLKYLGRVQEAEENFRSISANEKKIKYDHYL 512
Query: 464 QPYACYELGCLLLDKPETVGRGRALLLQAKEDFSGYDFENRLHVRIHAA 512
P A EL LL+++ LL AK+++ Y E+R H RI AA
Sbjct: 513 IPNALLELALLLMEQDRN-EEAIKLLESAKQNYKNYSMESRTHFRIQAA 560
>gi|148529023 hypothetical protein LOC23172 [Homo sapiens]
Length = 415
Score = 34.3 bits (77), Expect = 0.28
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 19 EEKMQLACDDLKTTEKLCESEEAGVIETIKNKIKKNVDVRKSAPSMVDRLQRQII 73
+EK+Q C D++ +E++ ES +A V NK+++ + RK+ RLQ+ ++
Sbjct: 217 QEKVQAVCADVEKSERVVESCQAEV-----NKLRRQITQRKNEKEQERRLQQAVL 266
>gi|217416374 hypothetical protein LOC92749 [Homo sapiens]
Length = 740
Score = 32.7 bits (73), Expect = 0.83
Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 22/143 (15%)
Query: 12 NAMMTFEEEKMQLACDDLKTTEKLCESEEAGVIETIKNKIKKNVDVRKSAPSMVDRLQRQ 71
N FE E+ +L + K E+ ++ A +E + N++KK D K +L RQ
Sbjct: 224 NIEKAFEVERQELLASNKKKWEQALQAHNAKELEYLNNRMKKVEDYEK-------QLNRQ 276
Query: 72 IIIADCQVYLAVLSFVKQELSAYIKGGWILRKAWKIYNKCYLDINALQELYQKKLTEESL 131
I DC+ Y + ++Q++ +I + A+ +L Q+KL
Sbjct: 277 -RIWDCEEYNMIKIKLEQDV--------------QILEQQLQQRKAIYQLNQEKLEYNLQ 321
Query: 132 TSDAANDNHIVAEGVSEESLNRL 154
++ V + + +NRL
Sbjct: 322 VLKKRDEESTVIKSQQKRKINRL 344
>gi|218563749 ArfGAP with coiled-coil, ankyrin repeat and PH domains
3 [Homo sapiens]
Length = 834
Score = 30.4 bits (67), Expect = 4.1
Identities = 29/126 (23%), Positives = 59/126 (46%), Gaps = 11/126 (8%)
Query: 6 SFVSFLNAMMTFEEEKMQLACDDLKTTEKLCESEEAGVIETIKNKIKKNVDVRKSAPSMV 65
S +SF++A +F ++ L +KL + VI++ ++K RK A
Sbjct: 189 SMLSFMHAQSSFFQQGYSLLHQLDPYMKKLAAELDQLVIDSA---VEKREMERKHAA--- 242
Query: 66 DRLQRQIIIADCQVYLAVLSFVKQELSAYIKGGWILRKA---WKIYNKCYLDINALQELY 122
+Q++ ++ D + + F S + G++ ++A +K +N+ + I Q +Y
Sbjct: 243 --IQQRTLLQDFSYDESKVEFDVDAPSGVVMEGYLFKRASNAFKTWNRRWFSIQNSQLVY 300
Query: 123 QKKLTE 128
QKKL +
Sbjct: 301 QKKLKD 306
>gi|210147462 von Willebrand factor A domain containing 5B1 [Homo
sapiens]
Length = 1215
Score = 30.4 bits (67), Expect = 4.1
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 1 MSFGASFVSFLNAMMTFEEEKMQLACDDLK 30
+ FG++F S + T+ E+ + +ACDD++
Sbjct: 400 IGFGSTFKSLFPSSQTYSEDSLAMACDDIQ 429
>gi|51477723 testis expressed sequence 11 isoform 2 [Homo sapiens]
Length = 925
Score = 30.0 bits (66), Expect = 5.4
Identities = 28/132 (21%), Positives = 54/132 (40%), Gaps = 16/132 (12%)
Query: 188 DRLQGLSSLMYASESKDMKAPLATLALLWYHTVVRPFFALDGSD---------------N 232
+ + L ++++ + + T AL WY+ +R F++ D D N
Sbjct: 396 ESMNWLHNILWRQAASSFEVQNYTDALQWYYYSLR-FYSTDEMDLDFTKLQRNMACCYLN 454
Query: 233 KAGLDEAKEILLKKEAAYPNSSLFMFFKGRIQRLECQINSALTSFHTALELAVDQREIQH 292
LD+AKE + + E P + F+ +I +E AL + T + D+ +
Sbjct: 455 LQQLDKAKEAVAEAERHDPRNVFTQFYIFKIAVIEGNSERALQAIITLENILTDEESEDN 514
Query: 293 VCLYEIGWCSMI 304
+ E G +M+
Sbjct: 515 DLVAERGSPTML 526
>gi|51477721 testis expressed sequence 11 isoform 1 [Homo sapiens]
Length = 940
Score = 30.0 bits (66), Expect = 5.4
Identities = 28/132 (21%), Positives = 54/132 (40%), Gaps = 16/132 (12%)
Query: 188 DRLQGLSSLMYASESKDMKAPLATLALLWYHTVVRPFFALDGSD---------------N 232
+ + L ++++ + + T AL WY+ +R F++ D D N
Sbjct: 411 ESMNWLHNILWRQAASSFEVQNYTDALQWYYYSLR-FYSTDEMDLDFTKLQRNMACCYLN 469
Query: 233 KAGLDEAKEILLKKEAAYPNSSLFMFFKGRIQRLECQINSALTSFHTALELAVDQREIQH 292
LD+AKE + + E P + F+ +I +E AL + T + D+ +
Sbjct: 470 LQQLDKAKEAVAEAERHDPRNVFTQFYIFKIAVIEGNSERALQAIITLENILTDEESEDN 529
Query: 293 VCLYEIGWCSMI 304
+ E G +M+
Sbjct: 530 DLVAERGSPTML 541
>gi|239755530 PREDICTED: similar to hCG2036644 [Homo sapiens]
Length = 336
Score = 30.0 bits (66), Expect = 5.4
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 94 YIKGGWI-LRKAWKIYNKCYLDINALQELYQKKLTEESLTSDAANDNHIVAEGVSEESLN 152
YI+G + L + K K Y +N + ++K+TE+ + S A ++H E VS ++
Sbjct: 51 YIQGVLLALYQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVS-RLID 109
Query: 153 RLKGAVSFGYGLFHLC 168
L+ A+ G HLC
Sbjct: 110 ELQTAIKSNIG--HLC 123
>gi|239750002 PREDICTED: hypothetical protein XP_002347250 [Homo
sapiens]
Length = 505
Score = 30.0 bits (66), Expect = 5.4
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 94 YIKGGWI-LRKAWKIYNKCYLDINALQELYQKKLTEESLTSDAANDNHIVAEGVSEESLN 152
YI+G + L + K K Y +N + ++K+TE+ + S A ++H E VS ++
Sbjct: 51 YIQGVLLALYQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVS-RLID 109
Query: 153 RLKGAVSFGYGLFHLC 168
L+ A+ G HLC
Sbjct: 110 ELQTAIKSNIG--HLC 123
>gi|239744313 PREDICTED: hypothetical protein XP_002343115 [Homo
sapiens]
Length = 456
Score = 30.0 bits (66), Expect = 5.4
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 94 YIKGGWI-LRKAWKIYNKCYLDINALQELYQKKLTEESLTSDAANDNHIVAEGVSEESLN 152
YI+G + L + K K Y +N + ++K+TE+ + S A ++H E VS ++
Sbjct: 2 YIQGVLLALYQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVS-RLID 60
Query: 153 RLKGAVSFGYGLFHLC 168
L+ A+ G HLC
Sbjct: 61 ELQTAIKSNIG--HLC 74
>gi|19424126 diamine N-acetyltransferase 2 [Homo sapiens]
Length = 170
Score = 30.0 bits (66), Expect = 5.4
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 123 QKKLTEESLTSDAANDNHIVAEGVSE--ESLNRLKGAVSFGYGLFHLCISMVPPNLLKII 180
Q K++EE+L +D DN V+E + +L G GYG+++ S + +
Sbjct: 33 QVKISEEALRADGFGDNPFYHCLVAEILPAPGKLLGPCVVGYGIYYFIYSTWKGRTIYLE 92
Query: 181 NLLGFPGDRLQGLSS 195
++ P R QG+ S
Sbjct: 93 DIYVMPEYRGQGIGS 107
>gi|156119621 inhibitor of DNA binding 3 [Homo sapiens]
Length = 119
Score = 30.0 bits (66), Expect = 5.4
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
Query: 468 CYELGCLLLDKPETVGRGRALLLQAKEDFSGYDFENRLHVRIHAALASLRELVP 521
CYE C L ++ + RGR A+E S D N + R LRELVP
Sbjct: 10 CYEAVCCLSERSLAIARGRGKGPAAEEPLSLLDDMNHCYSR-------LRELVP 56
>gi|120587023 down-regulated in metastasis [Homo sapiens]
Length = 2785
Score = 29.3 bits (64), Expect = 9.2
Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 18/153 (11%)
Query: 378 QTPTKALCVLASIEVLYLWKALPNCSFPNLQRMSQACHEVDDSSVVGLKYLLLGAIHKCL 437
QT T + + ++V YL + NC F NL E+ D S+ + L +I K L
Sbjct: 1454 QTITSYIKEMQIVDVNYLIPVMHNC-FYNL--------ELGDMSLSDNASMCLMSIIKKL 1504
Query: 438 G----NSEDAVQYFQRAVKDELCR----QNNLYVQPYACYELGCLLLDKPETVGRGRALL 489
+D + R++ ++L + Q Q Y L CL+ P + +
Sbjct: 1505 AALNVTEKDYREIIHRSLLEKLRKGLKSQTESIQQDYTTI-LSCLIQTFPNQLEFKDLVQ 1563
Query: 490 LQAKEDFSGYDFENRLHVRIHAALASLRELVPQ 522
L D FEN H++IH +L++L Q
Sbjct: 1564 LTHYHDPEMDFFENMKHIQIHRRARALKKLAKQ 1596
>gi|134244281 melanoma-associated antigen p97 isoform 1 precursor
[Homo sapiens]
Length = 738
Score = 29.3 bits (64), Expect = 9.2
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 322 SRWSQCYYAYLTAVCQGATGDVDGAQI--VFKEVQKLFKRKNNQIEQFS 368
+ W QC+ A + A D DG I + E Q+LF + + + FS
Sbjct: 266 TEWRQCHLARVPAHAVVVRADTDGGLIFRLLNEGQRLFSHEGSSFQMFS 314
>gi|89036565 PREDICTED: similar to Temporarily Assigned Gene name
family member (tag-184) [Homo sapiens]
Length = 2785
Score = 29.3 bits (64), Expect = 9.2
Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 18/153 (11%)
Query: 378 QTPTKALCVLASIEVLYLWKALPNCSFPNLQRMSQACHEVDDSSVVGLKYLLLGAIHKCL 437
QT T + + ++V YL + NC F NL E+ D S+ + L +I K L
Sbjct: 1454 QTITSYIKEMQIVDVNYLIPVMHNC-FYNL--------ELGDMSLSDNASMCLMSIIKKL 1504
Query: 438 G----NSEDAVQYFQRAVKDELCR----QNNLYVQPYACYELGCLLLDKPETVGRGRALL 489
+D + R++ ++L + Q Q Y L CL+ P + +
Sbjct: 1505 AALNVTEKDYREIIHRSLLEKLRKGLKSQTESIQQDYTTI-LSCLIQTFPNQLEFKDLVQ 1563
Query: 490 LQAKEDFSGYDFENRLHVRIHAALASLRELVPQ 522
L D FEN H++IH +L++L Q
Sbjct: 1564 LTHYHDPEMDFFENMKHIQIHRRARALKKLAKQ 1596
>gi|118402578 anaphase-promoting complex, subunit 6 [Homo sapiens]
Length = 620
Score = 29.3 bits (64), Expect = 9.2
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 427 YLLLGAIHKCLGNSEDAVQYFQRAV 451
Y +G IH +GN E+AV YF A+
Sbjct: 482 YSAIGYIHSLMGNFENAVDYFHTAL 506
>gi|118402580 anaphase-promoting complex, subunit 6 [Homo sapiens]
Length = 620
Score = 29.3 bits (64), Expect = 9.2
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 427 YLLLGAIHKCLGNSEDAVQYFQRAV 451
Y +G IH +GN E+AV YF A+
Sbjct: 482 YSAIGYIHSLMGNFENAVDYFHTAL 506
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.135 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,302,331
Number of Sequences: 37866
Number of extensions: 768733
Number of successful extensions: 1845
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1821
Number of HSP's gapped (non-prelim): 23
length of query: 522
length of database: 18,247,518
effective HSP length: 107
effective length of query: 415
effective length of database: 14,195,856
effective search space: 5891280240
effective search space used: 5891280240
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.