Guide to the Human Genome
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Search of human proteins with 239741157

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239741157 PREDICTED: hypothetical protein XP_002342123 [Homo
sapiens]
         (191 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239747332 PREDICTED: hypothetical protein XP_002346425 [Homo ...   411   e-115
gi|239741157 PREDICTED: hypothetical protein XP_002342123 [Homo ...   411   e-115
gi|239752789 PREDICTED: similar to ATPase, H+ transporting, lyso...   409   e-115
gi|4502319 ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e...   136   1e-32
gi|154689666 ATPase, H+ transporting, V0 subunit isoform 1 [Homo...   102   2e-22
gi|154689796 ATPase, H+ transporting, V0 subunit isoform 2 [Homo...    57   1e-08
gi|116235482 glycosyltransferase-like 1B [Homo sapiens]                32   0.25 
gi|239752668 PREDICTED: hypothetical protein [Homo sapiens]            32   0.43 
gi|239741010 PREDICTED: hypothetical protein XP_002342053 [Homo ...    32   0.43 
gi|19924141 like-glycosyltransferase [Homo sapiens]                    30   0.97 
gi|4758664 like-glycosyltransferase [Homo sapiens]                     30   0.97 
gi|106067657 luteinizing hormone/choriogonadotropin receptor pre...    30   1.7  
gi|52353274 olfactory receptor, family 6, subfamily X, member 1 ...    29   2.2  
gi|224994205 wolframin [Homo sapiens]                                  28   3.7  
gi|224994203 wolframin [Homo sapiens]                                  28   3.7  
gi|210032112 hydroxysteroid (17-beta) dehydrogenase 13 isoform B...    28   3.7  
gi|210032110 hydroxysteroid (17-beta) dehydrogenase 13 isoform A...    28   3.7  
gi|4559408 colony stimulating factor 2 receptor, beta precursor ...    28   4.8  
gi|239755300 PREDICTED: similar to centaurin, gamma-like family,...    28   6.3  
gi|148743791 solute carrier family 17 (sodium phosphate), member...    28   6.3  
gi|148728191 solute carrier family 17 (sodium phosphate), member...    28   6.3  
gi|52317150 olfactory receptor, family 51, subfamily D, member 1...    28   6.3  
gi|4504503 hydroxysteroid (17-beta) dehydrogenase 2 [Homo sapiens]     27   8.2  
gi|4507241 structure specific recognition protein 1 [Homo sapiens]     27   8.2  

>gi|239747332 PREDICTED: hypothetical protein XP_002346425 [Homo
           sapiens]
          Length = 191

 Score =  411 bits (1057), Expect = e-115
 Identities = 191/191 (100%), Positives = 191/191 (100%)

Query: 1   MTTSSFLDSHKASGLLDSGAFSCVRSWNWHVKQSENKKHWSGTKFADQVMNILMCDHPFQ 60
           MTTSSFLDSHKASGLLDSGAFSCVRSWNWHVKQSENKKHWSGTKFADQVMNILMCDHPFQ
Sbjct: 1   MTTSSFLDSHKASGLLDSGAFSCVRSWNWHVKQSENKKHWSGTKFADQVMNILMCDHPFQ 60

Query: 61  QLPTLNDWLANLFCFVADDMDAERVLSIPSHQDSLYSFRIKSSGLLQWQSWAYHSLMVLL 120
           QLPTLNDWLANLFCFVADDMDAERVLSIPSHQDSLYSFRIKSSGLLQWQSWAYHSLMVLL
Sbjct: 61  QLPTLNDWLANLFCFVADDMDAERVLSIPSHQDSLYSFRIKSSGLLQWQSWAYHSLMVLL 120

Query: 121 IVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFCPLFGPQLKN 180
           IVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFCPLFGPQLKN
Sbjct: 121 IVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFCPLFGPQLKN 180

Query: 181 ETSWYLRHHWP 191
           ETSWYLRHHWP
Sbjct: 181 ETSWYLRHHWP 191


>gi|239741157 PREDICTED: hypothetical protein XP_002342123 [Homo
           sapiens]
          Length = 191

 Score =  411 bits (1057), Expect = e-115
 Identities = 191/191 (100%), Positives = 191/191 (100%)

Query: 1   MTTSSFLDSHKASGLLDSGAFSCVRSWNWHVKQSENKKHWSGTKFADQVMNILMCDHPFQ 60
           MTTSSFLDSHKASGLLDSGAFSCVRSWNWHVKQSENKKHWSGTKFADQVMNILMCDHPFQ
Sbjct: 1   MTTSSFLDSHKASGLLDSGAFSCVRSWNWHVKQSENKKHWSGTKFADQVMNILMCDHPFQ 60

Query: 61  QLPTLNDWLANLFCFVADDMDAERVLSIPSHQDSLYSFRIKSSGLLQWQSWAYHSLMVLL 120
           QLPTLNDWLANLFCFVADDMDAERVLSIPSHQDSLYSFRIKSSGLLQWQSWAYHSLMVLL
Sbjct: 61  QLPTLNDWLANLFCFVADDMDAERVLSIPSHQDSLYSFRIKSSGLLQWQSWAYHSLMVLL 120

Query: 121 IVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFCPLFGPQLKN 180
           IVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFCPLFGPQLKN
Sbjct: 121 IVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFCPLFGPQLKN 180

Query: 181 ETSWYLRHHWP 191
           ETSWYLRHHWP
Sbjct: 181 ETSWYLRHHWP 191


>gi|239752789 PREDICTED: similar to ATPase, H+ transporting,
           lysosomal 9kDa, V0 subunit e1 [Homo sapiens]
          Length = 191

 Score =  409 bits (1052), Expect = e-115
 Identities = 190/191 (99%), Positives = 190/191 (99%)

Query: 1   MTTSSFLDSHKASGLLDSGAFSCVRSWNWHVKQSENKKHWSGTKFADQVMNILMCDHPFQ 60
           MTTSSFLDSHKASGLLDSGAFSCVRSWNWHVKQSENKKHWSGTKFADQVMNILMCDHPFQ
Sbjct: 1   MTTSSFLDSHKASGLLDSGAFSCVRSWNWHVKQSENKKHWSGTKFADQVMNILMCDHPFQ 60

Query: 61  QLPTLNDWLANLFCFVADDMDAERVLSIPSHQDSLYSFRIKSSGLLQWQSWAYHSLMVLL 120
           QLPTLNDWLANLFCFVADDMDAERVLSIPSHQDSLYSFRIKSSGLLQWQ WAYHSLMVLL
Sbjct: 61  QLPTLNDWLANLFCFVADDMDAERVLSIPSHQDSLYSFRIKSSGLLQWQPWAYHSLMVLL 120

Query: 121 IVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFCPLFGPQLKN 180
           IVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFCPLFGPQLKN
Sbjct: 121 IVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFCPLFGPQLKN 180

Query: 181 ETSWYLRHHWP 191
           ETSWYLRHHWP
Sbjct: 181 ETSWYLRHHWP 191


>gi|4502319 ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1
           [Homo sapiens]
          Length = 81

 Score =  136 bits (343), Expect = 1e-32
 Identities = 60/80 (75%), Positives = 68/80 (85%)

Query: 112 AYHSLMVLLIVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFC 171
           AYH L V LIV+S+FWGF+ FLVPWFIPK  +R VIIT+LVTCSVCCYLFWL+AIL    
Sbjct: 2   AYHGLTVPLIVMSVFWGFVGFLVPWFIPKGPNRGVIITMLVTCSVCCYLFWLIAILAQLN 61

Query: 172 PLFGPQLKNETSWYLRHHWP 191
           PLFGPQLKNET WYL++HWP
Sbjct: 62  PLFGPQLKNETIWYLKYHWP 81


>gi|154689666 ATPase, H+ transporting, V0 subunit isoform 1 [Homo
           sapiens]
          Length = 130

 Score =  102 bits (255), Expect = 2e-22
 Identities = 44/77 (57%), Positives = 55/77 (71%)

Query: 114 HSLMVLLIVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFCPL 173
           HS  + +I+ + FWG +    PWF+PK  +R VIIT+LV  +VCCYLFWL+AIL    PL
Sbjct: 53  HSFALPVIIFTTFWGLVGIAGPWFVPKGPNRGVIITMLVATAVCCYLFWLIAILAQLNPL 112

Query: 174 FGPQLKNETSWYLRHHW 190
           FGPQLKNET WY+R  W
Sbjct: 113 FGPQLKNETIWYVRFLW 129


>gi|154689796 ATPase, H+ transporting, V0 subunit isoform 2 [Homo
           sapiens]
          Length = 213

 Score = 57.0 bits (136), Expect = 1e-08
 Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 9/62 (14%)

Query: 114 HSLMVLLIVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFCPL 173
           HS  + +I+ + FWG +    PWF+PK  +R VIIT+LV  +VCCYL          CP 
Sbjct: 53  HSFALPVIIFTTFWGLVGIAGPWFVPKGPNRGVIITMLVATAVCCYL---------LCPA 103

Query: 174 FG 175
            G
Sbjct: 104 LG 105


>gi|116235482 glycosyltransferase-like 1B [Homo sapiens]
          Length = 721

 Score = 32.3 bits (72), Expect = 0.25
 Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%)

Query: 124 SMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFCPLFGPQLKNETS 183
           S  +G +  ++P  +P  L+RV+++   VT +      W +   F      G  ++N++ 
Sbjct: 176 SGLYGLMKLVLPSALPAELARVIVLDTDVTFASDISELWALFAHFSDTQAIG-LVENQSD 234

Query: 184 WYLRHHW 190
           WYL + W
Sbjct: 235 WYLGNLW 241


>gi|239752668 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 131

 Score = 31.6 bits (70), Expect = 0.43
 Identities = 18/49 (36%), Positives = 27/49 (55%)

Query: 120 LIVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILF 168
           LIV+S   GFL+   PW   KS+ ++     L++C   C + +L  ILF
Sbjct: 76  LIVVSKRVGFLTSHRPWLEVKSMFKLAGNKRLLSCMARCAIRFLCVILF 124


>gi|239741010 PREDICTED: hypothetical protein XP_002342053 [Homo
           sapiens]
          Length = 131

 Score = 31.6 bits (70), Expect = 0.43
 Identities = 18/49 (36%), Positives = 27/49 (55%)

Query: 120 LIVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILF 168
           LIV+S   GFL+   PW   KS+ ++     L++C   C + +L  ILF
Sbjct: 76  LIVVSKRVGFLTSHRPWLEVKSMFKLAGNKRLLSCMARCAIRFLCVILF 124


>gi|19924141 like-glycosyltransferase [Homo sapiens]
          Length = 756

 Score = 30.4 bits (67), Expect = 0.97
 Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 1/67 (1%)

Query: 124 SMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFCPLFGPQLKNETS 183
           S  +G +  ++   +P +L RV+++   +T +      W V   F    + G  ++N++ 
Sbjct: 217 SGIYGLMKLVLTKTLPANLERVIVLDTDITFATDIAELWAVFHKFKGQQVLG-LVENQSD 275

Query: 184 WYLRHHW 190
           WYL + W
Sbjct: 276 WYLGNLW 282


>gi|4758664 like-glycosyltransferase [Homo sapiens]
          Length = 756

 Score = 30.4 bits (67), Expect = 0.97
 Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 1/67 (1%)

Query: 124 SMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFCPLFGPQLKNETS 183
           S  +G +  ++   +P +L RV+++   +T +      W V   F    + G  ++N++ 
Sbjct: 217 SGIYGLMKLVLTKTLPANLERVIVLDTDITFATDIAELWAVFHKFKGQQVLG-LVENQSD 275

Query: 184 WYLRHHW 190
           WYL + W
Sbjct: 276 WYLGNLW 282


>gi|106067657 luteinizing hormone/choriogonadotropin receptor
           precursor [Homo sapiens]
          Length = 699

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 1/73 (1%)

Query: 99  RIKSSGLLQWQSWAYHSLMVLLIVISMF-WGFLSFLVPWFIPKSLSRVVIITILVTCSVC 157
           R++ + L+    W + SL+ +L ++ +  +  +S   P  +  +LS+V I+TIL+   V 
Sbjct: 479 RLRHAILIMLGGWLFSSLIAMLPLVGVSNYMKVSICFPMDVETTLSQVYILTILILNVVA 538

Query: 158 CYLFWLVAILFHF 170
            ++     I  +F
Sbjct: 539 FFIICACYIKIYF 551


>gi|52353274 olfactory receptor, family 6, subfamily X, member 1
           [Homo sapiens]
          Length = 312

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 12/79 (15%)

Query: 96  YSFRIKSSGLLQWQSWAYHSLMVLLIVISMFWGFLSFLVPWF----IPKSLSRVVIITIL 151
           Y   +  +GL+    WA   L + +     F   LSFL  W+    IPK L   V+   +
Sbjct: 33  YILTLAGNGLIIATVWAEPRLQIPMY---FFLCNLSFLEIWYTTTVIPKLLGTFVVARTV 89

Query: 152 VTCSVCCYLFWLVAILFHF 170
           + C  CC    L+   FHF
Sbjct: 90  I-CMSCC----LLQAFFHF 103


>gi|224994205 wolframin [Homo sapiens]
          Length = 890

 Score = 28.5 bits (62), Expect = 3.7
 Identities = 14/48 (29%), Positives = 25/48 (52%)

Query: 116 LMVLLIVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWL 163
           L+ LL  + + W +L  L   FI   +  +V++ + V C +  YL +L
Sbjct: 467 LLSLLPSMPLNWPYLKVLGQTFITVPVGHLVVLNVSVPCLLYVYLLYL 514


>gi|224994203 wolframin [Homo sapiens]
          Length = 890

 Score = 28.5 bits (62), Expect = 3.7
 Identities = 14/48 (29%), Positives = 25/48 (52%)

Query: 116 LMVLLIVISMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWL 163
           L+ LL  + + W +L  L   FI   +  +V++ + V C +  YL +L
Sbjct: 467 LLSLLPSMPLNWPYLKVLGQTFITVPVGHLVVLNVSVPCLLYVYLLYL 514


>gi|210032112 hydroxysteroid (17-beta) dehydrogenase 13 isoform B
           [Homo sapiens]
          Length = 264

 Score = 28.5 bits (62), Expect = 3.7
 Identities = 13/38 (34%), Positives = 24/38 (63%)

Query: 116 LMVLLIVISMFWGFLSFLVPWFIPKSLSRVVIITILVT 153
           L +LL++I++ + +L  LV +FIP+    V    +L+T
Sbjct: 5   LEILLLLITIIYSYLESLVKFFIPQRRKSVAGEIVLIT 42


>gi|210032110 hydroxysteroid (17-beta) dehydrogenase 13 isoform A
           [Homo sapiens]
          Length = 300

 Score = 28.5 bits (62), Expect = 3.7
 Identities = 13/38 (34%), Positives = 24/38 (63%)

Query: 116 LMVLLIVISMFWGFLSFLVPWFIPKSLSRVVIITILVT 153
           L +LL++I++ + +L  LV +FIP+    V    +L+T
Sbjct: 5   LEILLLLITIIYSYLESLVKFFIPQRRKSVAGEIVLIT 42


>gi|4559408 colony stimulating factor 2 receptor, beta precursor
          [Homo sapiens]
          Length = 897

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 11/31 (35%), Positives = 20/31 (64%)

Query: 58 PFQQLPTLNDWLANLFCFVADDMDAERVLSI 88
          P Q L   ND+ +++ C  AD  DA+R++++
Sbjct: 29 PLQTLRCYNDYTSHITCRWADTQDAQRLVNV 59


>gi|239755300 PREDICTED: similar to centaurin, gamma-like family,
           member 1 [Homo sapiens]
          Length = 284

 Score = 27.7 bits (60), Expect = 6.3
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 79  DMDAERVLSIPSHQDSLYSFRIKSSGLLQW 108
           D DA+R LSIP  Q   ++ R++S  L  W
Sbjct: 93  DRDADRSLSIPDEQLHSFASRVRSLELDDW 122


>gi|148743791 solute carrier family 17 (sodium phosphate), member 3
           isoform a [Homo sapiens]
          Length = 498

 Score = 27.7 bits (60), Expect = 6.3
 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 6/70 (8%)

Query: 62  LPTLNDWLANLFCFVADDMDAERVLSIPSHQDSLYSFRIKSSGLLQWQSWAYHSLMVLLI 121
           L +L  W   L CF    + +  V+ IP++  S+Y   I+ +GLL    +      ++  
Sbjct: 291 LRSLPIWSICLGCFSHQWLVSTMVVYIPTYISSVYHVNIRDNGLLSALPF------IVAW 344

Query: 122 VISMFWGFLS 131
           VI M  G+L+
Sbjct: 345 VIGMVGGYLA 354


>gi|148728191 solute carrier family 17 (sodium phosphate), member 3
           isoform b [Homo sapiens]
          Length = 420

 Score = 27.7 bits (60), Expect = 6.3
 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 6/70 (8%)

Query: 62  LPTLNDWLANLFCFVADDMDAERVLSIPSHQDSLYSFRIKSSGLLQWQSWAYHSLMVLLI 121
           L +L  W   L CF    + +  V+ IP++  S+Y   I+ +GLL    +      ++  
Sbjct: 213 LRSLPIWSICLGCFSHQWLVSTMVVYIPTYISSVYHVNIRDNGLLSALPF------IVAW 266

Query: 122 VISMFWGFLS 131
           VI M  G+L+
Sbjct: 267 VIGMVGGYLA 276


>gi|52317150 olfactory receptor, family 51, subfamily D, member 1
           [Homo sapiens]
          Length = 324

 Score = 27.7 bits (60), Expect = 6.3
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 8/65 (12%)

Query: 114 HSLMVLLIVI---SMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHF 170
           + L ++L V+   S+F GF   L+ W + +  SR   +    TC     +  L A+L  +
Sbjct: 211 YGLFIILSVMGVDSLFIGFSYILILWAVLELSSRRAALKAFNTC-----ISHLCAVLVFY 265

Query: 171 CPLFG 175
            PL G
Sbjct: 266 VPLIG 270


>gi|4504503 hydroxysteroid (17-beta) dehydrogenase 2 [Homo sapiens]
          Length = 387

 Score = 27.3 bits (59), Expect = 8.2
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 101 KSSGLL-QWQSWAYHSLMVLLIVISMFWGFLSFLVPWFI 138
           KSSG L  W         V L+++S FWG + F V  F+
Sbjct: 29  KSSGQLWSWMVCLAGLCAVCLLILSPFWGLILFSVSCFL 67


>gi|4507241 structure specific recognition protein 1 [Homo sapiens]
          Length = 709

 Score = 27.3 bits (59), Expect = 8.2
 Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 13/63 (20%)

Query: 4   SSFLDSHKASGLLDSGAFSCVRSWNWHVKQSENKKHWSGTKFADQVMNILMCDHPFQQLP 63
           S F  +H    L++     CV+ WNW              KF  Q+++  + D P  ++P
Sbjct: 86  SDFFKTHYRLELMEKDL--CVKGWNWGT-----------VKFGGQLLSFDIGDQPVFEIP 132

Query: 64  TLN 66
             N
Sbjct: 133 LSN 135


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.329    0.138    0.488 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,292,709
Number of Sequences: 37866
Number of extensions: 284049
Number of successful extensions: 836
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 817
Number of HSP's gapped (non-prelim): 28
length of query: 191
length of database: 18,247,518
effective HSP length: 96
effective length of query: 95
effective length of database: 14,612,382
effective search space: 1388176290
effective search space used: 1388176290
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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