Guide to the Human Genome
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Name: ERO1LB Sequence: fasta or formatted (467aa) NCBI GI: 239582761
Description:

endoplasmic reticulum oxidoreductin 1-Lbeta

Referenced in:

Oxygen Sensing and Hemoglobin
ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         28           3
 C cysteine            3.0         14           1
 D aspartate           6.0         28           2
 E glutamate           7.3         34           2
 F phenylalanine       5.1         24           1
 G glycine             6.0         28           1
 H histidine           2.1         10           1
 I isoleucine          4.7         22           1
 K lysine              8.4         39           2
 L leucine            11.1         52           3
 M methionine          1.1          5           1
 N asparagine          4.9         23           2
 P proline             4.3         20           1
 Q glutamine           3.4         16           1
 R arginine            5.8         27           2
 S serine              6.9         32           1
 T threonine           3.9         18           1
 V valine              4.5         21           2
 W tryptophan          1.7          8           1
 Y tyrosine            3.9         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   endoplasmic reticulum oxidoreductin 1-Lbeta 
ERO1L                 0.618   ERO1-like 
PCNXL3                0.005   pecanex-like 3 
PTPRZ1                0.005   protein tyrosine phosphatase, receptor-type, zeta1 p...
CPSF4                 0.005   cleavage and polyadenylation specific factor 4, 30k...
CPSF4                 0.005   cleavage and polyadenylation specific factor 4, 30kDa...
XAB2                  0.005   XPA binding protein 2 
PTPRC                 0.004   protein tyrosine phosphatase, receptor type, C isofo...
PTPRC                 0.004   protein tyrosine phosphatase, receptor type, C isofo...
PTPRC                 0.004   protein tyrosine phosphatase, receptor type, C isofo...
DDX10                 0.004   DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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