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Search of human proteins with 23308545
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|23308545 transmembrane protein 74 [Homo sapiens]
(305 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|23308545 transmembrane protein 74 [Homo sapiens] 608 e-174
gi|8922927 hypothetical protein LOC55321 [Homo sapiens] 151 8e-37
gi|189217874 neurensin 1 [Homo sapiens] 40 0.003
gi|16445438 bromodomain and WD repeat domain containing 1 isofor... 34 0.14
gi|16445436 bromodomain and WD repeat domain containing 1 isofor... 34 0.14
gi|5032313 dystrophin Dp140bc isoform [Homo sapiens] 34 0.18
gi|5032311 dystrophin Dp140ab isoform [Homo sapiens] 34 0.18
gi|5032309 dystrophin Dp140b isoform [Homo sapiens] 34 0.18
gi|5032303 dystrophin Dp71ab isoform [Homo sapiens] 34 0.18
gi|5032299 dystrophin Dp71b isoform [Homo sapiens] 34 0.18
gi|157388929 epsin 3 [Homo sapiens] 33 0.41
gi|5032281 dystrophin Dp427c isoform [Homo sapiens] 32 0.54
gi|5032307 dystrophin Dp140c isoform [Homo sapiens] 32 0.54
gi|5032295 dystrophin Dp116 isoform [Homo sapiens] 32 0.54
gi|5032291 dystrophin Dp260-2 isoform [Homo sapiens] 32 0.54
gi|150036268 dystrophin Dp260-1 isoform [Homo sapiens] 32 0.54
gi|5032315 dystrophin Dp427p2 isoform [Homo sapiens] 32 0.54
gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens] 32 0.54
gi|33636758 ring finger protein 146 [Homo sapiens] 32 0.54
gi|5032301 dystrophin Dp71a isoform [Homo sapiens] 32 0.54
gi|5032297 dystrophin Dp71 isoform [Homo sapiens] 32 0.54
gi|5032293 dystrophin Dp140 isoform [Homo sapiens] 32 0.54
gi|5032285 dystrophin Dp427l isoform [Homo sapiens] 32 0.54
gi|5032283 dystrophin Dp427m isoform [Homo sapiens] 32 0.54
gi|153251865 hypothetical protein LOC84226 [Homo sapiens] 32 0.91
gi|7657261 Rap guanine nucleotide exchange factor 2 [Homo sapiens] 32 0.91
gi|83367077 mucin 16 [Homo sapiens] 31 1.6
gi|169173184 PREDICTED: hypothetical protein [Homo sapiens] 31 1.6
gi|29570782 additional sex combs like 1 [Homo sapiens] 31 1.6
gi|88758615 integrin alpha 2b preproprotein [Homo sapiens] 30 2.0
>gi|23308545 transmembrane protein 74 [Homo sapiens]
Length = 305
Score = 608 bits (1568), Expect = e-174
Identities = 305/305 (100%), Positives = 305/305 (100%)
Query: 1 MELHYLAKKSNQADLCDARDWSSRGLPGDQADTAATRAALCCQKQCASTPRATEMEGSKL 60
MELHYLAKKSNQADLCDARDWSSRGLPGDQADTAATRAALCCQKQCASTPRATEMEGSKL
Sbjct: 1 MELHYLAKKSNQADLCDARDWSSRGLPGDQADTAATRAALCCQKQCASTPRATEMEGSKL 60
Query: 61 SSSPASPSSSLQNSTLQPDAFPPGLLHSGNNQITAERKVCNCCSQELETSFTYVDKNINL 120
SSSPASPSSSLQNSTLQPDAFPPGLLHSGNNQITAERKVCNCCSQELETSFTYVDKNINL
Sbjct: 61 SSSPASPSSSLQNSTLQPDAFPPGLLHSGNNQITAERKVCNCCSQELETSFTYVDKNINL 120
Query: 121 EQRNRSSPSAKGHNHPGELGWENPNEWSQEAAISLISEEEDDTSSEATSSGKSIDYGFIS 180
EQRNRSSPSAKGHNHPGELGWENPNEWSQEAAISLISEEEDDTSSEATSSGKSIDYGFIS
Sbjct: 121 EQRNRSSPSAKGHNHPGELGWENPNEWSQEAAISLISEEEDDTSSEATSSGKSIDYGFIS 180
Query: 181 AILFLVTGILLVIISYIVPREVTVDPNTVAAREMERLEKESARLGAHLDRCVIAGLCLLT 240
AILFLVTGILLVIISYIVPREVTVDPNTVAAREMERLEKESARLGAHLDRCVIAGLCLLT
Sbjct: 181 AILFLVTGILLVIISYIVPREVTVDPNTVAAREMERLEKESARLGAHLDRCVIAGLCLLT 240
Query: 241 LGGVILSCLLMMSMWKGELYRRNRFASSKESAKLYGSFNFRMKTSTNENTLELSLVEEDA 300
LGGVILSCLLMMSMWKGELYRRNRFASSKESAKLYGSFNFRMKTSTNENTLELSLVEEDA
Sbjct: 241 LGGVILSCLLMMSMWKGELYRRNRFASSKESAKLYGSFNFRMKTSTNENTLELSLVEEDA 300
Query: 301 LAVQS 305
LAVQS
Sbjct: 301 LAVQS 305
>gi|8922927 hypothetical protein LOC55321 [Homo sapiens]
Length = 256
Score = 151 bits (381), Expect = 8e-37
Identities = 108/242 (44%), Positives = 138/242 (57%), Gaps = 35/242 (14%)
Query: 78 PDAFPPGL-LHSGNNQITAERK-------------VCNCC--SQELETSFTYVDKNINLE 121
P A PPGL L + +N A R+ V N C S+E ET F
Sbjct: 24 PMASPPGLELKTLSNGPQAPRRSAPLGPVAPTREGVENACFSSEEHETHFQNPGNT---- 79
Query: 122 QRNRSSPSAKGHNHPGELGWENPNEWSQEAAISLISEEEDDTSSEATSSGKSIDYGFISA 181
R SSPS G + SQ +SL SEE + E S + +DYGF+SA
Sbjct: 80 -RLGSSPSPPGG--------VSSLPRSQRDDLSLHSEE--GPALEPVS--RPVDYGFVSA 126
Query: 182 ILFLVTGILLVIISYIVPREVTVDPNTVAAREMERLEKESARLGAHLDRCVIAGLCLLTL 241
++FLV+GILLV+ +Y +PRE V+P+TV AREMERLE ARLG+HLDRC+IAGL LLT+
Sbjct: 127 LVFLVSGILLVVTAYAIPREARVNPDTVTAREMERLEMYYARLGSHLDRCIIAGLGLLTV 186
Query: 242 GGVILSCLLMMSMWKGELYRRNRFASSKESAKLYGSFNFRMKTSTNENTLELSLVEEDAL 301
GG++LS LLM+S+ KGELYRR F K S K YGS N RM+ + +LVE + +
Sbjct: 187 GGMLLSVLLMVSLCKGELYRRRTFVPGKGSRKTYGSINLRMRQLNGDG--GQALVENEVV 244
Query: 302 AV 303
V
Sbjct: 245 QV 246
>gi|189217874 neurensin 1 [Homo sapiens]
Length = 195
Score = 39.7 bits (91), Expect = 0.003
Identities = 23/127 (18%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 145 NEWSQEAAISLISEEEDDTSSEATSSGKSIDY--GFISAILFLVTGILLVIISYIVPREV 202
+++ ++ S+ E+D + + S+ + G IS +F++ G+ ++ + ++VP ++
Sbjct: 31 HQFYEDCTASIWEYEDDFQIQRSPNRWSSVFWKVGLISGTVFVILGLTVLAVGFLVPPKI 90
Query: 203 TVDPNTVAAREMERLEKESARLGAHLDRCVIAGLCLLTLGGVILSCLLMMSMWKGELYRR 262
+ ++ + + + LD +AG L +GG ++ L+MS++ +
Sbjct: 91 ----EAFGEADFVVVDTHAVQFNSALDMYKLAGAVLFCIGGTSMAGCLLMSVFVKSYSKE 146
Query: 263 NRFASSK 269
+F K
Sbjct: 147 EKFLQQK 153
>gi|16445438 bromodomain and WD repeat domain containing 1 isoform B
[Homo sapiens]
Length = 2269
Score = 34.3 bits (77), Expect = 0.14
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 22 SSRGLPGDQADTAATRAALCCQKQCA--STPRATEMEGS---KLSSSPASPSS-SLQNST 75
SS GD +D+A + + ST +E+E S LSSS +S S S ++S
Sbjct: 1497 SSGVTSGDSSDSAESSERRKRNRPITNGSTLSESEVEDSLATSLSSSASSSSEESKESSR 1556
Query: 76 LQPDAFPPGLLHSGNNQIT----AERK-----VCNCCSQELETSFTYVDKNINLEQRNRS 126
+ + GL S N ++T A+RK + N C ++ Y+ + N
Sbjct: 1557 ARESSSRSGLSRSSNLRVTRTRAAQRKTGPVSLANGCGRKATRKRVYLSDSDNNSLETGE 1616
Query: 127 SPSAKGHNHPGELGWENPNEWSQEAA--ISLISEEEDDTSSEATSSGKSIDYGFISAI 182
A+ N+ L + + AA I L+S+ E+++SSE+ SG+ + + SA+
Sbjct: 1617 ILKARAGNNRKVL-----RKCAAVAANKIKLMSDVEENSSSESVCSGRKLPHRNASAV 1669
>gi|16445436 bromodomain and WD repeat domain containing 1 isoform A
[Homo sapiens]
Length = 2320
Score = 34.3 bits (77), Expect = 0.14
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 22 SSRGLPGDQADTAATRAALCCQKQCA--STPRATEMEGS---KLSSSPASPSS-SLQNST 75
SS GD +D+A + + ST +E+E S LSSS +S S S ++S
Sbjct: 1497 SSGVTSGDSSDSAESSERRKRNRPITNGSTLSESEVEDSLATSLSSSASSSSEESKESSR 1556
Query: 76 LQPDAFPPGLLHSGNNQIT----AERK-----VCNCCSQELETSFTYVDKNINLEQRNRS 126
+ + GL S N ++T A+RK + N C ++ Y+ + N
Sbjct: 1557 ARESSSRSGLSRSSNLRVTRTRAAQRKTGPVSLANGCGRKATRKRVYLSDSDNNSLETGE 1616
Query: 127 SPSAKGHNHPGELGWENPNEWSQEAA--ISLISEEEDDTSSEATSSGKSIDYGFISAI 182
A+ N+ L + + AA I L+S+ E+++SSE+ SG+ + + SA+
Sbjct: 1617 ILKARAGNNRKVL-----RKCAAVAANKIKLMSDVEENSSSESVCSGRKLPHRNASAV 1669
>gi|5032313 dystrophin Dp140bc isoform [Homo sapiens]
Length = 1133
Score = 33.9 bits (76), Expect = 0.18
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Query: 44 KQCASTPRATEMEGSKLSSSPASPSSSLQNSTLQPDAFPPGLLHSGNNQITAERKVCNCC 103
+Q P+A E ++ +SPS+SLQ S D+ P LL +Q + +
Sbjct: 1024 RQLLEQPQA---EAKVNGTTVSSPSTSLQRS----DSSQPMLLRVVGSQTSDSMGEEDLL 1076
Query: 104 SQELETSFTYVDKNINLEQRNRSSPSAKGHNHPGELGWENPNEWSQEAAISLISEEE 160
S +TS + +EQ N S PS++GHN + + E+ +S++++EE
Sbjct: 1077 SPPQDTSTGLEEV---MEQLNNSFPSSRGHNVGSLFHMADDLGRAMESLVSVMTDEE 1130
>gi|5032311 dystrophin Dp140ab isoform [Homo sapiens]
Length = 1230
Score = 33.9 bits (76), Expect = 0.18
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Query: 44 KQCASTPRATEMEGSKLSSSPASPSSSLQNSTLQPDAFPPGLLHSGNNQITAERKVCNCC 103
+Q P+A E ++ +SPS+SLQ S D+ P LL +Q + +
Sbjct: 1121 RQLLEQPQA---EAKVNGTTVSSPSTSLQRS----DSSQPMLLRVVGSQTSDSMGEEDLL 1173
Query: 104 SQELETSFTYVDKNINLEQRNRSSPSAKGHNHPGELGWENPNEWSQEAAISLISEEE 160
S +TS + +EQ N S PS++GHN + + E+ +S++++EE
Sbjct: 1174 SPPQDTSTGLEEV---MEQLNNSFPSSRGHNVGSLFHMADDLGRAMESLVSVMTDEE 1227
>gi|5032309 dystrophin Dp140b isoform [Homo sapiens]
Length = 1243
Score = 33.9 bits (76), Expect = 0.18
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Query: 44 KQCASTPRATEMEGSKLSSSPASPSSSLQNSTLQPDAFPPGLLHSGNNQITAERKVCNCC 103
+Q P+A E ++ +SPS+SLQ S D+ P LL +Q + +
Sbjct: 1134 RQLLEQPQA---EAKVNGTTVSSPSTSLQRS----DSSQPMLLRVVGSQTSDSMGEEDLL 1186
Query: 104 SQELETSFTYVDKNINLEQRNRSSPSAKGHNHPGELGWENPNEWSQEAAISLISEEE 160
S +TS + +EQ N S PS++GHN + + E+ +S++++EE
Sbjct: 1187 SPPQDTSTGLEEV---MEQLNNSFPSSRGHNVGSLFHMADDLGRAMESLVSVMTDEE 1240
>gi|5032303 dystrophin Dp71ab isoform [Homo sapiens]
Length = 622
Score = 33.9 bits (76), Expect = 0.18
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Query: 44 KQCASTPRATEMEGSKLSSSPASPSSSLQNSTLQPDAFPPGLLHSGNNQITAERKVCNCC 103
+Q P+A E ++ +SPS+SLQ S D+ P LL +Q + +
Sbjct: 513 RQLLEQPQA---EAKVNGTTVSSPSTSLQRS----DSSQPMLLRVVGSQTSDSMGEEDLL 565
Query: 104 SQELETSFTYVDKNINLEQRNRSSPSAKGHNHPGELGWENPNEWSQEAAISLISEEE 160
S +TS + +EQ N S PS++GHN + + E+ +S++++EE
Sbjct: 566 SPPQDTSTGLEEV---MEQLNNSFPSSRGHNVGSLFHMADDLGRAMESLVSVMTDEE 619
>gi|5032299 dystrophin Dp71b isoform [Homo sapiens]
Length = 635
Score = 33.9 bits (76), Expect = 0.18
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Query: 44 KQCASTPRATEMEGSKLSSSPASPSSSLQNSTLQPDAFPPGLLHSGNNQITAERKVCNCC 103
+Q P+A E ++ +SPS+SLQ S D+ P LL +Q + +
Sbjct: 526 RQLLEQPQA---EAKVNGTTVSSPSTSLQRS----DSSQPMLLRVVGSQTSDSMGEEDLL 578
Query: 104 SQELETSFTYVDKNINLEQRNRSSPSAKGHNHPGELGWENPNEWSQEAAISLISEEE 160
S +TS + +EQ N S PS++GHN + + E+ +S++++EE
Sbjct: 579 SPPQDTSTGLEEV---MEQLNNSFPSSRGHNVGSLFHMADDLGRAMESLVSVMTDEE 632
>gi|157388929 epsin 3 [Homo sapiens]
Length = 632
Score = 32.7 bits (73), Expect = 0.41
Identities = 32/121 (26%), Positives = 48/121 (39%), Gaps = 17/121 (14%)
Query: 28 GDQADTAATRAALCCQKQCASTPRATE----MEGSKLSSSPASP----------SSSLQN 73
G +T+ T A P +TE +E + S P+SP SS QN
Sbjct: 407 GASLETSDTPGGASTFDPFAKPPESTETKEGLEQALPSGKPSSPVELDLFGDPSPSSKQN 466
Query: 74 STLQPDAFPPGLLHSGNNQITAERKVCNCCSQELETSFTYVDKNINLEQRNRSSPSAKGH 133
T +PDA G+L Q + E + C L S + + +NL+ ++ AK
Sbjct: 467 GTKEPDALDLGILGEALTQPSKEARACRTPESFLGPSASSL---VNLDSLVKAPQVAKTR 523
Query: 134 N 134
N
Sbjct: 524 N 524
>gi|5032281 dystrophin Dp427c isoform [Homo sapiens]
Length = 3677
Score = 32.3 bits (72), Expect = 0.54
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 44 KQCASTPRATEMEGSKLSSSPASPSSSLQNSTLQPDAFPPGLLHSGNNQITAERKVCNCC 103
+Q P+A E ++ +SPS+SLQ S D+ P LL +Q + +
Sbjct: 3586 RQLLEQPQA---EAKVNGTTVSSPSTSLQRS----DSSQPMLLRVVGSQTSDSMGEEDLL 3638
Query: 104 SQELETSFTYVDKNINLEQRNRSSPSAKGHNHPGE 138
S +TS + +EQ N S PS++G N PG+
Sbjct: 3639 SPPQDTSTGLEEV---MEQLNNSFPSSRGRNTPGK 3670
>gi|5032307 dystrophin Dp140c isoform [Homo sapiens]
Length = 1105
Score = 32.3 bits (72), Expect = 0.54
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 44 KQCASTPRATEMEGSKLSSSPASPSSSLQNSTLQPDAFPPGLLHSGNNQITAERKVCNCC 103
+Q P+A E ++ +SPS+SLQ S D+ P LL +Q + +
Sbjct: 1014 RQLLEQPQA---EAKVNGTTVSSPSTSLQRS----DSSQPMLLRVVGSQTSDSMGEEDLL 1066
Query: 104 SQELETSFTYVDKNINLEQRNRSSPSAKGHNHPGE 138
S +TS + +EQ N S PS++G N PG+
Sbjct: 1067 SPPQDTSTGLEEV---MEQLNNSFPSSRGRNTPGK 1098
>gi|5032295 dystrophin Dp116 isoform [Homo sapiens]
Length = 956
Score = 32.3 bits (72), Expect = 0.54
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 44 KQCASTPRATEMEGSKLSSSPASPSSSLQNSTLQPDAFPPGLLHSGNNQITAERKVCNCC 103
+Q P+A E ++ +SPS+SLQ S D+ P LL +Q + +
Sbjct: 865 RQLLEQPQA---EAKVNGTTVSSPSTSLQRS----DSSQPMLLRVVGSQTSDSMGEEDLL 917
Query: 104 SQELETSFTYVDKNINLEQRNRSSPSAKGHNHPGE 138
S +TS + +EQ N S PS++G N PG+
Sbjct: 918 SPPQDTSTGLEEV---MEQLNNSFPSSRGRNTPGK 949
>gi|5032291 dystrophin Dp260-2 isoform [Homo sapiens]
Length = 2341
Score = 32.3 bits (72), Expect = 0.54
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 44 KQCASTPRATEMEGSKLSSSPASPSSSLQNSTLQPDAFPPGLLHSGNNQITAERKVCNCC 103
+Q P+A E ++ +SPS+SLQ S D+ P LL +Q + +
Sbjct: 2250 RQLLEQPQA---EAKVNGTTVSSPSTSLQRS----DSSQPMLLRVVGSQTSDSMGEEDLL 2302
Query: 104 SQELETSFTYVDKNINLEQRNRSSPSAKGHNHPGE 138
S +TS + +EQ N S PS++G N PG+
Sbjct: 2303 SPPQDTSTGLEEV---MEQLNNSFPSSRGRNTPGK 2334
>gi|150036268 dystrophin Dp260-1 isoform [Homo sapiens]
Length = 2344
Score = 32.3 bits (72), Expect = 0.54
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 44 KQCASTPRATEMEGSKLSSSPASPSSSLQNSTLQPDAFPPGLLHSGNNQITAERKVCNCC 103
+Q P+A E ++ +SPS+SLQ S D+ P LL +Q + +
Sbjct: 2253 RQLLEQPQA---EAKVNGTTVSSPSTSLQRS----DSSQPMLLRVVGSQTSDSMGEEDLL 2305
Query: 104 SQELETSFTYVDKNINLEQRNRSSPSAKGHNHPGE 138
S +TS + +EQ N S PS++G N PG+
Sbjct: 2306 SPPQDTSTGLEEV---MEQLNNSFPSSRGRNTPGK 2337
>gi|5032315 dystrophin Dp427p2 isoform [Homo sapiens]
Length = 3562
Score = 32.3 bits (72), Expect = 0.54
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 44 KQCASTPRATEMEGSKLSSSPASPSSSLQNSTLQPDAFPPGLLHSGNNQITAERKVCNCC 103
+Q P+A E ++ +SPS+SLQ S D+ P LL +Q + +
Sbjct: 3471 RQLLEQPQA---EAKVNGTTVSSPSTSLQRS----DSSQPMLLRVVGSQTSDSMGEEDLL 3523
Query: 104 SQELETSFTYVDKNINLEQRNRSSPSAKGHNHPGE 138
S +TS + +EQ N S PS++G N PG+
Sbjct: 3524 SPPQDTSTGLEEV---MEQLNNSFPSSRGRNTPGK 3555
>gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens]
Length = 3681
Score = 32.3 bits (72), Expect = 0.54
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 44 KQCASTPRATEMEGSKLSSSPASPSSSLQNSTLQPDAFPPGLLHSGNNQITAERKVCNCC 103
+Q P+A E ++ +SPS+SLQ S D+ P LL +Q + +
Sbjct: 3590 RQLLEQPQA---EAKVNGTTVSSPSTSLQRS----DSSQPMLLRVVGSQTSDSMGEEDLL 3642
Query: 104 SQELETSFTYVDKNINLEQRNRSSPSAKGHNHPGE 138
S +TS + +EQ N S PS++G N PG+
Sbjct: 3643 SPPQDTSTGLEEV---MEQLNNSFPSSRGRNTPGK 3674
>gi|33636758 ring finger protein 146 [Homo sapiens]
Length = 358
Score = 32.3 bits (72), Expect = 0.54
Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 14/128 (10%)
Query: 40 LCCQKQCASTPRATEMEGSKLSSSPASPSSSLQNSTLQPDAFPPGLLHSGNNQITAERKV 99
L C + R + +G+ S+ + S S+++P L S + Q+T+
Sbjct: 182 LDCDANTVNLARESSADGADSVSAQSGASVQPLVSSVRP-------LTSVDGQLTSPATP 234
Query: 100 CNCCSQELETSFTYVDKNINLEQRNRSSPSAKGHNHPGELGWENPNEWSQEAAISLISEE 159
S LE SF ++ Q + + + + H GE E+P+ A + I E
Sbjct: 235 SPDASTSLEDSFAHL-------QLSGDNTAERSHRGEGEEDHESPSSGRVPAPDTSIEET 287
Query: 160 EDDTSSEA 167
E D SS++
Sbjct: 288 ESDASSDS 295
>gi|5032301 dystrophin Dp71a isoform [Homo sapiens]
Length = 604
Score = 32.3 bits (72), Expect = 0.54
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 44 KQCASTPRATEMEGSKLSSSPASPSSSLQNSTLQPDAFPPGLLHSGNNQITAERKVCNCC 103
+Q P+A E ++ +SPS+SLQ S D+ P LL +Q + +
Sbjct: 513 RQLLEQPQA---EAKVNGTTVSSPSTSLQRS----DSSQPMLLRVVGSQTSDSMGEEDLL 565
Query: 104 SQELETSFTYVDKNINLEQRNRSSPSAKGHNHPGE 138
S +TS + +EQ N S PS++G N PG+
Sbjct: 566 SPPQDTSTGLEEV---MEQLNNSFPSSRGRNTPGK 597
>gi|5032297 dystrophin Dp71 isoform [Homo sapiens]
Length = 617
Score = 32.3 bits (72), Expect = 0.54
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 44 KQCASTPRATEMEGSKLSSSPASPSSSLQNSTLQPDAFPPGLLHSGNNQITAERKVCNCC 103
+Q P+A E ++ +SPS+SLQ S D+ P LL +Q + +
Sbjct: 526 RQLLEQPQA---EAKVNGTTVSSPSTSLQRS----DSSQPMLLRVVGSQTSDSMGEEDLL 578
Query: 104 SQELETSFTYVDKNINLEQRNRSSPSAKGHNHPGE 138
S +TS + +EQ N S PS++G N PG+
Sbjct: 579 SPPQDTSTGLEEV---MEQLNNSFPSSRGRNTPGK 610
>gi|5032293 dystrophin Dp140 isoform [Homo sapiens]
Length = 1225
Score = 32.3 bits (72), Expect = 0.54
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 44 KQCASTPRATEMEGSKLSSSPASPSSSLQNSTLQPDAFPPGLLHSGNNQITAERKVCNCC 103
+Q P+A E ++ +SPS+SLQ S D+ P LL +Q + +
Sbjct: 1134 RQLLEQPQA---EAKVNGTTVSSPSTSLQRS----DSSQPMLLRVVGSQTSDSMGEEDLL 1186
Query: 104 SQELETSFTYVDKNINLEQRNRSSPSAKGHNHPGE 138
S +TS + +EQ N S PS++G N PG+
Sbjct: 1187 SPPQDTSTGLEEV---MEQLNNSFPSSRGRNTPGK 1218
>gi|5032285 dystrophin Dp427l isoform [Homo sapiens]
Length = 3562
Score = 32.3 bits (72), Expect = 0.54
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 44 KQCASTPRATEMEGSKLSSSPASPSSSLQNSTLQPDAFPPGLLHSGNNQITAERKVCNCC 103
+Q P+A E ++ +SPS+SLQ S D+ P LL +Q + +
Sbjct: 3471 RQLLEQPQA---EAKVNGTTVSSPSTSLQRS----DSSQPMLLRVVGSQTSDSMGEEDLL 3523
Query: 104 SQELETSFTYVDKNINLEQRNRSSPSAKGHNHPGE 138
S +TS + +EQ N S PS++G N PG+
Sbjct: 3524 SPPQDTSTGLEEV---MEQLNNSFPSSRGRNTPGK 3555
>gi|5032283 dystrophin Dp427m isoform [Homo sapiens]
Length = 3685
Score = 32.3 bits (72), Expect = 0.54
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 44 KQCASTPRATEMEGSKLSSSPASPSSSLQNSTLQPDAFPPGLLHSGNNQITAERKVCNCC 103
+Q P+A E ++ +SPS+SLQ S D+ P LL +Q + +
Sbjct: 3594 RQLLEQPQA---EAKVNGTTVSSPSTSLQRS----DSSQPMLLRVVGSQTSDSMGEEDLL 3646
Query: 104 SQELETSFTYVDKNINLEQRNRSSPSAKGHNHPGE 138
S +TS + +EQ N S PS++G N PG+
Sbjct: 3647 SPPQDTSTGLEEV---MEQLNNSFPSSRGRNTPGK 3678
>gi|153251865 hypothetical protein LOC84226 [Homo sapiens]
Length = 1984
Score = 31.6 bits (70), Expect = 0.91
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 122 QRNRSSPSAKGHNHPGELGWENPNEWSQ----EAAISLISEEEDDTSSEATSSGKS 173
QR+ SPS K H+ P E W +P++ + E + +SE + S+ + G S
Sbjct: 1587 QRSHCSPSRKNHSSPSERSWRSPSQRNHCSPPERSCHSLSERGLHSPSQRSHRGPS 1642
>gi|7657261 Rap guanine nucleotide exchange factor 2 [Homo sapiens]
Length = 1499
Score = 31.6 bits (70), Expect = 0.91
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 58 SKLSSSPASPSSSLQNS-TLQPDAFPPGLLHSGNNQITAERKVCNCCSQELETSFTYVDK 116
S+LSS P SP SS + TL P SG+++I++ + + +SF V
Sbjct: 1112 SQLSSPPTSPQSSPRKGYTLAPSGTVDNFSDSGHSEISSRSSIVS------NSSFDSVPV 1165
Query: 117 NINLEQRNRSSPS 129
+++ E+R R S S
Sbjct: 1166 SLHDERRQRHSVS 1178
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 30.8 bits (68), Expect = 1.6
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 58 SKLSSSPASPSSSLQNSTLQPDAFPPGLLHSGNNQITAERKVCNCCSQELETSFTYVDKN 117
S L+SSP + + L S + PP L H+ + ++T + N ++ + S N
Sbjct: 7128 SLLTSSPVTTTDMLHTSPELVTSSPPKLSHTSDERLTTGKDTTN--TEAVHPSTNTAASN 7185
Query: 118 INLEQRNRSSPSA 130
+ + SPS+
Sbjct: 7186 VEIPSSGHESPSS 7198
>gi|169173184 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1230
Score = 30.8 bits (68), Expect = 1.6
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 126 SSPSAKGHNHPGELGWENPNE----------WSQEAAISLISEEEDDTSSEATSSGKSID 175
+SPSA G + P + GW +P+ W+ +A S S SS A+ + D
Sbjct: 132 ASPSASGASTPSDSGWASPSASWASTSSDSGWASPSA-SWTSPSASCASSSASGASTPSD 190
Query: 176 YGFISAILFLVT 187
G+ S +F V+
Sbjct: 191 SGWASPSVFWVS 202
>gi|29570782 additional sex combs like 1 [Homo sapiens]
Length = 1541
Score = 30.8 bits (68), Expect = 1.6
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 86 LHSGNNQITAERKVCNCCSQELETSFTYVD-KNINLEQRNRSSPSAKGHNHPGELGWENP 144
LH N IT+ RK+ S+E +SF+ D K + ++ +S +A G + PG+L
Sbjct: 1213 LHPVTNPITSSRKLEEMDSKEQFSSFSCEDQKEVRAMSQDSNSNAAPGKS-PGDLTTSRT 1271
Query: 145 NEWSQEAAISLISEEED---DTSSEATSSGKSI 174
+S IS E+ S T GK +
Sbjct: 1272 PRFSSPNVISFGPEQTGRALGDQSNVTGQGKKL 1304
>gi|88758615 integrin alpha 2b preproprotein [Homo sapiens]
Length = 1039
Score = 30.4 bits (67), Expect = 2.0
Identities = 11/24 (45%), Positives = 19/24 (79%)
Query: 241 LGGVILSCLLMMSMWKGELYRRNR 264
LGG++L +L+++MWK ++RNR
Sbjct: 1005 LGGLLLLTILVLAMWKVGFFKRNR 1028
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.127 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,679,607
Number of Sequences: 37866
Number of extensions: 505783
Number of successful extensions: 2099
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 2058
Number of HSP's gapped (non-prelim): 80
length of query: 305
length of database: 18,247,518
effective HSP length: 102
effective length of query: 203
effective length of database: 14,385,186
effective search space: 2920192758
effective search space used: 2920192758
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.